AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0054310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0054310 MtrunA17_Chr1g0150271 93.359 256 16 1 1 256 1 255 0.0 497
Msa0054310 MtrunA17_Chr1g0150281 46.626 163 74 4 83 239 122 277 1.17e-41 144
Msa0054310 MtrunA17_Chr4g0001361 36.090 266 133 4 6 234 45 310 2.66e-41 144
Msa0054310 MtrunA17_Chr2g0333851 37.931 261 120 7 15 240 62 315 1.09e-40 142
Msa0054310 MtrunA17_Chr3g0136961 41.250 160 83 2 86 234 123 282 2.79e-37 132
Msa0054310 MtrunA17_Chr7g0270831 38.919 185 82 6 6 161 94 276 3.36e-32 122
Msa0054310 MtrunA17_Chr3g0099641 48.421 95 47 1 83 177 235 327 1.11e-26 107
Msa0054310 MtrunA17_Chr4g0051181 42.342 111 52 2 61 161 195 303 2.00e-25 104
Msa0054310 MtrunA17_Chr4g0060271 52.439 82 37 1 80 161 236 315 4.79e-25 103
Msa0054310 MtrunA17_Chr2g0288871 54.795 73 33 0 89 161 293 365 3.08e-24 101
Msa0054310 MtrunA17_Chr4g0075201 59.091 66 27 0 96 161 262 327 5.49e-24 100
Msa0054310 MtrunA17_Chr7g0216891 42.982 114 58 3 45 158 170 276 1.31e-23 99.4
Msa0054310 MtrunA17_Chr2g0302391 50.575 87 40 2 99 185 209 292 3.53e-23 97.4
Msa0054310 MtrunA17_Chr4g0025051 38.211 123 63 3 39 161 286 395 4.46e-23 97.8
Msa0054310 MtrunA17_Chr2g0322391 56.061 66 29 0 96 161 344 409 5.41e-23 97.8
Msa0054310 MtrunA17_Chr4g0025061 53.030 66 31 0 96 161 355 420 2.11e-21 93.2
Msa0054310 MtrunA17_Chr5g0447701 50.000 76 35 2 86 161 239 311 1.01e-19 87.4
Msa0054310 MtrunA17_Chr2g0294231 45.745 94 43 3 100 186 202 294 2.05e-18 83.6
Msa0054310 MtrunA17_Chr5g0432161 50.794 63 30 1 99 161 419 480 3.63e-18 83.6
Msa0054310 MtrunA17_Chr5g0432161 48.333 60 29 2 102 161 245 302 1.51e-12 67.0
Msa0054310 MtrunA17_Chr5g0445311 37.815 119 63 4 51 161 308 423 3.85e-18 83.6
Msa0054310 MtrunA17_Chr3g0101131 41.935 93 48 3 72 161 385 474 5.36e-18 83.2
Msa0054310 MtrunA17_Chr4g0053281 51.613 62 30 0 99 160 264 325 9.19e-18 81.3
Msa0054310 MtrunA17_Chr7g0218081 40.952 105 53 4 74 172 382 483 1.56e-17 81.6
Msa0054310 MtrunA17_Chr7g0218081 48.333 60 29 2 102 161 229 286 2.57e-11 63.2
Msa0054310 MtrunA17_Chr1g0194481 50.769 65 31 1 100 164 157 220 2.67e-17 80.1
Msa0054310 MtrunA17_Chr1g0184691 48.485 66 33 1 99 163 291 356 3.50e-17 80.1
Msa0054310 MtrunA17_Chr2g0289181 46.970 66 35 0 96 161 9 74 3.53e-17 78.2
Msa0054310 MtrunA17_Chr3g0106491 49.206 63 31 1 99 161 363 424 3.62e-17 80.5
Msa0054310 MtrunA17_Chr3g0106491 50.000 60 28 2 102 161 199 256 3.89e-13 68.6
Msa0054310 MtrunA17_Chr1g0150801 50.000 60 29 1 99 158 100 158 9.00e-17 75.5
Msa0054310 MtrunA17_Chr5g0401821 50.000 62 31 0 99 160 197 258 9.18e-17 77.8
Msa0054310 MtrunA17_Chr3g0079691 46.575 73 38 1 89 161 483 554 9.29e-17 79.7
Msa0054310 MtrunA17_Chr3g0079691 41.333 75 35 3 94 161 266 338 6.44e-11 62.4
Msa0054310 MtrunA17_Chr7g0228941 51.667 60 29 0 99 158 50 109 9.42e-17 74.3
Msa0054310 MtrunA17_Chr5g0418191 40.404 99 49 3 71 161 283 379 9.83e-17 79.0
Msa0054310 MtrunA17_Chr5g0418191 35.922 103 58 3 102 204 152 246 4.67e-14 71.2
Msa0054310 MtrunA17_Chr4g0004911 45.205 73 39 1 89 161 324 395 2.00e-16 78.2
Msa0054310 MtrunA17_Chr4g0004911 45.902 61 32 1 101 161 184 243 7.02e-13 67.8
Msa0054310 MtrunA17_Chr4g0042831 42.683 82 43 3 80 161 260 337 2.44e-16 77.8
Msa0054310 MtrunA17_Chr4g0042831 43.421 76 38 2 102 177 146 216 9.49e-11 61.2
Msa0054310 MtrunA17_Chr7g0224801 48.387 62 31 1 99 160 91 151 2.65e-16 74.3
Msa0054310 MtrunA17_Chr7g0270191 46.053 76 38 2 100 175 144 216 2.76e-16 76.6
Msa0054310 MtrunA17_Chr7g0243891 45.205 73 39 1 89 161 362 433 3.84e-16 77.4
Msa0054310 MtrunA17_Chr7g0243891 45.946 74 33 3 88 161 208 274 6.82e-12 65.1
Msa0054310 MtrunA17_Chr4g0051881 41.111 90 43 3 100 180 177 265 3.99e-16 76.6
Msa0054310 MtrunA17_Chr1g0188941 34.259 108 61 3 54 161 13 110 4.92e-16 72.0
Msa0054310 MtrunA17_Chr1g0147881 46.774 62 33 0 99 160 260 321 5.75e-16 76.3
Msa0054310 MtrunA17_Chr7g0263531 46.970 66 34 1 96 161 356 420 5.79e-16 77.0
Msa0054310 MtrunA17_Chr7g0263531 48.571 70 34 2 102 171 190 257 3.99e-15 74.3
Msa0054310 MtrunA17_Chr5g0443131 48.387 62 31 1 100 161 156 216 5.91e-16 75.9
Msa0054310 MtrunA17_Chr2g0284321 48.333 60 31 0 102 161 36 95 9.23e-16 73.9
Msa0054310 MtrunA17_Chr7g0249311 47.619 63 32 1 99 161 390 451 1.49e-15 75.9
Msa0054310 MtrunA17_Chr7g0249311 42.500 80 42 3 101 180 179 254 1.38e-11 64.3
Msa0054310 MtrunA17_Chr8g0379461 48.333 60 31 0 102 161 77 136 1.69e-15 73.6
Msa0054310 MtrunA17_Chr7g0249301 46.032 63 33 1 99 161 290 351 3.13e-15 74.3
Msa0054310 MtrunA17_Chr7g0249301 40.741 81 44 3 100 180 61 137 1.78e-12 66.2
Msa0054310 MtrunA17_Chr3g0139021 50.000 60 30 0 99 158 312 371 4.26e-15 74.3
Msa0054310 MtrunA17_Chr3g0129361 44.615 65 35 1 99 163 142 205 4.67e-15 72.0
Msa0054310 MtrunA17_Chr5g0418781 37.615 109 57 4 100 198 123 230 4.91e-15 72.8
Msa0054310 MtrunA17_Chr8g0335811 43.939 66 36 1 99 164 152 216 9.32e-15 71.2
Msa0054310 MtrunA17_Chr8g0383351 43.077 65 36 1 99 163 158 221 1.25e-14 71.2
Msa0054310 MtrunA17_Chr4g0074001 46.032 63 33 1 99 161 357 418 1.36e-14 72.8
Msa0054310 MtrunA17_Chr7g0270051 48.333 60 31 0 102 161 54 113 1.58e-14 71.2
Msa0054310 MtrunA17_Chr4g0071521 47.541 61 32 0 99 159 243 303 2.04e-14 71.6
Msa0054310 MtrunA17_Chr2g0319961 45.455 66 36 0 96 161 75 140 2.21e-14 70.9
Msa0054310 MtrunA17_Chr7g0248721 51.667 60 27 2 99 158 139 196 4.20e-14 69.3
Msa0054310 MtrunA17_Chr4g0024391 42.424 66 38 0 96 161 224 289 4.22e-14 71.6
Msa0054310 MtrunA17_Chr7g0248691 29.193 161 87 4 45 195 115 258 5.46e-14 70.5
Msa0054310 MtrunA17_Chr4g0068541 40.506 79 44 2 83 161 192 267 5.58e-14 70.9
Msa0054310 MtrunA17_Chr2g0293481 43.939 66 37 0 98 163 264 329 7.57e-14 70.9
Msa0054310 MtrunA17_Chr7g0238921 50.877 57 27 1 102 158 125 180 1.27e-13 69.3
Msa0054310 MtrunA17_Chr8g0348311 45.902 61 33 0 102 162 156 216 1.67e-13 69.3
Msa0054310 MtrunA17_Chr8g0386241 42.029 69 37 2 99 165 101 168 2.46e-13 66.6
Msa0054310 MtrunA17_Chr8g0383251 42.857 63 35 1 99 161 106 167 2.88e-13 66.6
Msa0054310 MtrunA17_Chr8g0387501 42.169 83 43 1 102 184 130 207 2.99e-13 67.8
Msa0054310 MtrunA17_Chr3g0129321 43.284 67 37 1 99 165 116 181 4.10e-13 66.6
Msa0054310 MtrunA17_Chr6g0485431 34.737 95 58 3 68 161 123 214 5.03e-13 67.8
Msa0054310 MtrunA17_Chr5g0432071 28.743 167 94 6 22 171 14 172 6.24e-13 65.9
Msa0054310 MtrunA17_Chr1g0202461 43.333 60 34 0 102 161 262 321 4.48e-12 65.1
Msa0054310 MtrunA17_Chr1g0189391 35.870 92 55 3 69 159 67 155 2.94e-11 62.8
Msa0054310 MtrunA17_Chr3g0126391 33.333 105 66 2 100 200 132 236 4.34e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0054310 AT1G80840.1 36.691 278 140 4 1 242 22 299 4.55e-46 156
Msa0054310 AT4G31800.2 45.714 175 79 3 66 240 84 242 3.90e-42 144
Msa0054310 AT4G31800.1 49.351 154 70 2 87 240 162 307 1.12e-41 145
Msa0054310 AT2G25000.1 36.923 260 115 8 6 244 39 270 6.31e-38 134
Msa0054310 AT2G25000.2 36.614 254 112 8 12 244 2 227 1.61e-37 132
Msa0054310 AT2G25000.4 36.614 254 112 8 12 244 2 227 1.61e-37 132
Msa0054310 AT2G25000.3 37.008 254 111 8 12 244 24 249 4.64e-37 131
Msa0054310 AT1G68150.1 42.105 114 64 1 48 161 184 295 3.66e-26 105
Msa0054310 AT4G04450.2 47.191 89 47 0 89 177 186 274 7.17e-26 105
Msa0054310 AT4G04450.1 47.191 89 47 0 89 177 280 368 1.72e-25 105
Msa0054310 AT4G22070.4 56.164 73 32 0 89 161 285 357 4.15e-25 103
Msa0054310 AT4G22070.3 56.164 73 32 0 89 161 285 357 4.15e-25 103
Msa0054310 AT4G22070.2 56.164 73 32 0 89 161 285 357 4.15e-25 103
Msa0054310 AT4G22070.1 56.164 73 32 0 89 161 285 357 4.15e-25 103
Msa0054310 AT1G62300.1 56.164 73 32 0 89 161 300 372 5.13e-25 103
Msa0054310 AT4G01720.1 31.250 208 91 5 6 161 92 299 1.11e-23 99.8
Msa0054310 AT5G15130.2 58.065 62 26 0 100 161 184 245 3.35e-23 98.6
Msa0054310 AT5G15130.1 58.065 62 26 0 100 161 226 287 3.59e-23 98.6
Msa0054310 AT1G18860.1 53.165 79 35 1 83 161 223 299 3.93e-23 98.2
Msa0054310 AT4G31800.3 75.000 52 13 0 87 138 162 213 5.42e-23 94.4
Msa0054310 AT1G69810.2 33.533 167 105 4 7 171 54 216 9.70e-23 95.5
Msa0054310 AT1G69810.1 33.533 167 105 4 7 171 112 274 1.47e-22 95.9
Msa0054310 AT2G04880.2 32.468 154 83 5 99 242 281 423 4.58e-19 86.3
Msa0054310 AT2G04880.2 42.857 63 34 2 99 161 109 169 2.26e-11 63.9
Msa0054310 AT2G04880.1 32.468 154 83 5 99 242 305 447 5.82e-19 86.3
Msa0054310 AT2G04880.1 42.857 63 34 2 99 161 109 169 2.50e-11 63.5
Msa0054310 AT3G04670.1 39.623 106 59 1 53 158 219 319 1.71e-18 83.6
Msa0054310 AT5G28650.1 37.168 113 66 1 46 158 212 319 7.49e-18 82.0
Msa0054310 AT2G38470.1 41.176 85 40 2 99 183 360 434 1.24e-17 82.4
Msa0054310 AT2G38470.1 40.506 79 37 3 91 161 166 242 7.38e-13 68.2
Msa0054310 AT5G56270.1 50.794 63 30 1 99 161 485 546 1.70e-17 82.0
Msa0054310 AT4G26640.5 41.667 96 50 2 71 161 170 264 2.13e-17 81.3
Msa0054310 AT4G26640.6 41.667 96 50 2 71 161 170 264 2.13e-17 81.3
Msa0054310 AT4G26640.4 41.667 96 50 2 71 161 170 264 2.13e-17 81.3
Msa0054310 AT4G26640.3 41.667 96 50 2 71 161 170 264 2.13e-17 81.3
Msa0054310 AT5G41570.1 41.000 100 49 4 59 158 65 154 2.54e-17 77.8
Msa0054310 AT1G64000.1 45.205 73 37 2 86 158 101 170 2.87e-17 77.8
Msa0054310 AT4G26640.1 41.667 96 50 2 71 161 274 368 3.21e-17 80.9
Msa0054310 AT4G26640.7 41.667 96 50 2 71 161 306 400 3.64e-17 80.9
Msa0054310 AT4G26640.2 41.667 96 50 2 71 161 346 440 3.77e-17 80.9
Msa0054310 AT2G03340.1 47.143 70 36 1 92 161 406 474 6.14e-17 80.1
Msa0054310 AT2G03340.1 37.736 106 55 5 65 161 205 308 1.16e-14 73.6
Msa0054310 AT1G29860.1 48.387 62 31 1 100 161 135 195 6.55e-17 78.6
Msa0054310 AT5G13080.1 50.000 60 29 1 99 158 65 123 1.23e-16 75.1
Msa0054310 AT2G30590.1 50.000 60 30 0 99 158 311 370 1.28e-16 79.0
Msa0054310 AT1G13960.2 45.714 70 37 1 92 161 247 315 1.49e-16 78.6
Msa0054310 AT1G13960.2 43.210 81 35 4 81 161 65 134 1.08e-12 67.4
Msa0054310 AT1G13960.1 47.619 63 32 1 99 161 407 468 1.54e-16 79.0
Msa0054310 AT1G13960.1 43.210 81 35 4 81 161 218 287 9.81e-13 67.8
Msa0054310 AT2G23320.1 49.153 59 30 0 102 160 241 299 1.56e-16 78.2
Msa0054310 AT3G62340.1 39.796 98 53 2 96 188 113 209 1.62e-16 77.4
Msa0054310 AT3G01080.1 45.714 70 37 1 92 161 297 365 2.10e-16 78.6
Msa0054310 AT3G01080.2 45.714 70 37 1 92 161 335 403 2.37e-16 78.6
Msa0054310 AT4G18170.1 45.161 62 33 1 100 161 171 231 2.75e-16 77.4
Msa0054310 AT2G47260.1 44.578 83 45 1 100 182 173 254 3.89e-16 77.0
Msa0054310 AT2G24570.1 48.333 60 31 0 99 158 241 300 8.23e-16 76.3
Msa0054310 AT2G30250.1 40.698 86 48 2 76 161 305 387 9.16e-16 76.6
Msa0054310 AT2G30250.1 39.130 92 44 3 102 193 167 246 9.72e-12 64.7
Msa0054310 AT4G31550.1 48.333 60 31 0 99 158 244 303 1.01e-15 75.9
Msa0054310 AT4G31550.2 48.333 60 31 0 99 158 243 302 1.07e-15 75.9
Msa0054310 AT4G24240.1 45.161 62 34 0 99 160 279 340 1.17e-15 75.9
Msa0054310 AT3G01970.1 46.377 69 34 2 99 165 63 130 1.24e-15 72.4
Msa0054310 AT5G49520.1 46.774 62 32 1 100 161 220 280 1.29e-15 76.3
Msa0054310 AT5G26170.1 43.750 64 35 1 99 162 111 173 1.89e-15 72.4
Msa0054310 AT5G07100.2 42.029 69 39 1 99 167 139 206 2.13e-15 73.2
Msa0054310 AT5G07100.2 48.571 70 34 2 102 171 25 92 3.98e-13 67.0
Msa0054310 AT5G07100.4 42.029 69 39 1 99 167 139 206 2.13e-15 73.2
Msa0054310 AT5G07100.4 48.571 70 34 2 102 171 25 92 3.98e-13 67.0
Msa0054310 AT5G07100.5 42.029 69 39 1 99 167 139 206 2.13e-15 73.2
Msa0054310 AT5G07100.5 48.571 70 34 2 102 171 25 92 3.98e-13 67.0
Msa0054310 AT5G07100.3 42.029 69 39 1 99 167 139 206 2.13e-15 73.2
Msa0054310 AT5G07100.3 48.571 70 34 2 102 171 25 92 3.98e-13 67.0
Msa0054310 AT2G37260.3 38.095 105 59 2 54 158 227 325 2.62e-15 74.7
Msa0054310 AT2G37260.3 47.541 61 30 2 102 162 86 144 1.67e-12 66.6
Msa0054310 AT2G37260.2 38.095 105 59 2 54 158 225 323 2.64e-15 74.7
Msa0054310 AT2G37260.2 47.541 61 30 2 102 162 84 142 1.76e-12 66.6
Msa0054310 AT2G46130.1 39.560 91 46 3 68 158 5 86 2.77e-15 70.5
Msa0054310 AT5G46350.1 43.548 62 34 1 100 161 182 242 3.49e-15 74.3
Msa0054310 AT5G07100.1 44.444 63 34 1 99 161 232 293 3.52e-15 74.3
Msa0054310 AT5G07100.1 48.571 70 34 2 102 171 118 185 1.05e-12 67.0
Msa0054310 AT2G37260.1 47.059 68 35 1 91 158 339 405 3.66e-15 74.7
Msa0054310 AT2G37260.1 47.541 61 30 2 102 162 166 224 1.60e-12 67.0
Msa0054310 AT2G44745.1 43.478 69 38 1 99 167 143 210 4.29e-15 72.4
Msa0054310 AT4G30935.1 44.595 74 38 2 99 170 329 401 4.73e-15 74.7
Msa0054310 AT1G55600.1 51.667 60 28 1 102 161 308 366 6.46e-15 74.3
Msa0054310 AT1G29280.1 46.667 60 32 0 102 161 75 134 7.09e-15 72.8
Msa0054310 AT1G69310.4 46.154 65 31 2 100 161 146 209 1.02e-14 72.4
Msa0054310 AT1G69310.2 46.154 65 31 2 100 161 146 209 1.02e-14 72.4
Msa0054310 AT1G69310.1 46.154 65 31 2 100 161 146 209 1.02e-14 72.4
Msa0054310 AT2G21900.1 40.260 77 45 1 85 161 93 168 1.72e-14 70.5
Msa0054310 AT4G26440.1 44.872 78 40 2 99 176 370 444 3.18e-14 72.4
Msa0054310 AT4G26440.1 33.628 113 64 4 102 209 179 285 5.19e-11 62.8
Msa0054310 AT4G39410.1 43.077 65 36 1 99 163 221 284 7.05e-14 70.5
Msa0054310 AT3G58710.2 37.634 93 58 0 72 164 41 133 8.46e-14 69.7
Msa0054310 AT3G58710.1 47.619 63 33 0 102 164 72 134 8.80e-14 69.7
Msa0054310 AT2G34830.1 43.939 66 37 0 98 163 212 277 1.35e-13 70.1
Msa0054310 AT2G34830.2 43.939 66 37 0 98 163 221 286 1.44e-13 70.1
Msa0054310 AT5G43290.1 43.077 65 36 1 94 158 107 170 2.44e-13 68.6
Msa0054310 AT1G30650.1 45.312 64 35 0 98 161 214 277 2.91e-13 69.3
Msa0054310 AT5G64810.1 41.667 60 34 1 99 158 108 166 3.90e-13 66.6
Msa0054310 AT4G01250.1 41.176 85 49 1 102 185 129 213 7.42e-13 67.4
Msa0054310 AT4G23550.1 41.270 63 37 0 99 161 138 200 4.01e-12 65.5
Msa0054310 AT5G52830.1 46.667 60 32 0 102 161 166 225 4.02e-12 65.5
Msa0054310 AT5G45050.1 45.000 60 33 0 102 161 1181 1240 7.40e-12 65.5
Msa0054310 AT5G45050.2 45.000 60 33 0 102 161 1153 1212 7.52e-12 65.5
Msa0054310 AT5G45050.4 45.000 60 33 0 102 161 1042 1101 7.64e-12 65.5
Msa0054310 AT2G46400.1 37.000 100 56 3 85 182 90 184 3.57e-11 62.4
Msa0054310 AT4G12020.6 31.731 104 69 2 92 195 459 560 4.74e-11 63.2
Msa0054310 AT4G12020.8 31.731 104 69 2 92 195 459 560 4.74e-11 63.2
Msa0054310 AT4G12020.7 31.731 104 69 2 92 195 459 560 5.25e-11 63.2
Msa0054310 AT4G12020.1 31.731 104 69 2 92 195 459 560 5.45e-11 63.2
Msa0054310 AT4G12020.9 31.731 104 69 2 92 195 459 560 5.45e-11 63.2
Msa0054310 AT4G12020.3 31.731 104 69 2 92 195 459 560 5.52e-11 63.2
Msa0054310 AT4G12020.2 31.731 104 69 2 92 195 459 560 5.53e-11 63.2
Msa0054310 AT4G12020.5 31.731 104 69 2 92 195 392 493 5.56e-11 63.2
Msa0054310 AT4G12020.10 31.731 104 69 2 92 195 459 560 5.62e-11 63.2
Msa0054310 AT4G12020.4 31.731 104 69 2 92 195 459 560 5.73e-11 63.2
Msa0054310 AT4G12020.11 31.731 104 69 2 92 195 459 560 6.22e-11 62.8

Find 51 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCTTTACACTTGTATTT+TGG 0.191740 1_2:+9075339 None:intergenic
ATAAGCACTTGGAGACTATT+TGG 0.219634 1_2:-9075188 Msa0054310:three_prime_UTR
ATAAGTTCAAATCATCAAAT+TGG 0.248317 1_2:-9076313 Msa0054310:CDS
GAAAATTTACTTGCGACGTT+TGG 0.274537 1_2:-9075239 Msa0054310:three_prime_UTR
CATACCAAACTTTCATCATT+AGG 0.285634 1_2:+9076202 None:intergenic
TTAGAGATTGATGAACCTTT+AGG 0.306541 1_2:+9075626 None:intergenic
CTTCTCCTAGAGCTTACTTT+AGG 0.314347 1_2:-9075932 Msa0054310:CDS
TGAAGTCAGGATCTTTGATT+AGG 0.319072 1_2:+9075486 None:intergenic
AAATCTCGATTTGAATCTTT+CGG 0.326816 1_2:-9075399 Msa0054310:CDS
CGAAGAGATAAACTCAAATA+AGG 0.329775 1_2:+9075212 None:intergenic
CTCACAAAGTCTAGTATTTG+TGG 0.333230 1_2:+9075568 None:intergenic
TCAACCTAATGATGAAAGTT+TGG 0.350703 1_2:-9076206 Msa0054310:intron
AAAATTTACTTGCGACGTTT+GGG 0.366133 1_2:-9075238 Msa0054310:three_prime_UTR
GGCTATCAATGGAGGAAGTA+TGG 0.366288 1_2:-9075978 Msa0054310:CDS
TCTAGGAGAAGCATTGTCTT+TGG 0.371896 1_2:+9075944 None:intergenic
TCTTCAAATGGCTATTAGAA+TGG 0.376148 1_2:-9076683 None:intergenic
GGAGTGAAATGAAGGTTTCT+TGG 0.384704 1_2:-9075375 Msa0054310:exon
TCTTTGTCATTCAATGTTGT+TGG 0.386703 1_2:+9075593 None:intergenic
TAAGCACTTGGAGACTATTT+GGG 0.390860 1_2:-9075187 Msa0054310:three_prime_UTR
ACTTAGATAGTATCAAAATA+TGG 0.392382 1_2:-9075306 Msa0054310:three_prime_UTR
GATGGTTTGAATGACTCATT+AGG 0.404082 1_2:+9075659 None:intergenic
TCATCTTCAAGAAATCAAAA+AGG 0.410845 1_2:-9076353 Msa0054310:CDS
CTTTCGGAGGAGTGAAATGA+AGG 0.425821 1_2:-9075383 Msa0054310:exon
GGCTATTAGAATGGATGATA+AGG 0.430275 1_2:-9076674 Msa0054310:intron
GAAGTCAGGATCTTTGATTA+GGG 0.432423 1_2:+9075487 None:intergenic
TAAGTTCAAATCATCAAATT+GGG 0.447315 1_2:-9076312 Msa0054310:CDS
ATCCTTGTTGCAACATATGA+TGG 0.459740 1_2:-9075701 Msa0054310:CDS
GCTAATGCTGCAGTGAAGTC+AGG 0.465446 1_2:+9075473 None:intergenic
ATGGAGGAAGTATGGTCAAA+AGG 0.476669 1_2:-9075970 Msa0054310:CDS
CCATCTTCATCCACACCTAA+AGG 0.490427 1_2:-9075641 Msa0054310:CDS
AATATATAGATAATAAAAGA+TGG 0.494453 1_2:-9075999 Msa0054310:intron
TGCGGGGCAACTAGGAGCCA+TGG 0.508480 1_2:+9075905 None:intergenic
AGCTTACTTTAGGTGCTCCA+TGG 0.512350 1_2:-9075922 Msa0054310:CDS
GAGAATGTCATGCAACAGTT+TGG 0.514761 1_2:-9075548 Msa0054310:CDS
CTTATGTTCTTGATCAGTGA+CGG 0.524464 1_2:+9075433 None:intergenic
GTCATGCAACAGTTTGGCTA+TGG 0.529941 1_2:-9075542 Msa0054310:CDS
TAATAAAAGATGGCTATCAA+TGG 0.531094 1_2:-9075989 Msa0054310:CDS
CCTTTAGGTGTGGATGAAGA+TGG 0.531585 1_2:+9075641 None:intergenic
TATCTCTTCGTATAAGCACT+TGG 0.534417 1_2:-9075199 Msa0054310:three_prime_UTR
GAGCACCTAAAGTAAGCTCT+AGG 0.566462 1_2:+9075927 None:intergenic
GTTCGTACAAAGACTTGTAG+TGG 0.571338 1_2:+9076229 None:intergenic
TGCAACAGTTTGGCTATGGA+AGG 0.583957 1_2:-9075538 Msa0054310:CDS
CTCCATCATATGTTGCAACA+AGG 0.587646 1_2:+9075699 None:intergenic
AGAGTTACAACAAGTGAGAG+AGG 0.590536 1_2:-9076437 Msa0054310:CDS
TCTCGATTTGAATCTTTCGG+AGG 0.620338 1_2:-9075396 Msa0054310:CDS
TAAAAGATGGCTATCAATGG+AGG 0.624488 1_2:-9075986 Msa0054310:CDS
GATTGATGAACCTTTAGGTG+TGG 0.626271 1_2:+9075631 None:intergenic
AGTTCAGTGATATCACCGAA+AGG 0.630096 1_2:-9075265 Msa0054310:three_prime_UTR
TATGATGGAGAGCACAACCA+TGG 0.692151 1_2:-9075686 Msa0054310:CDS
ATGACTCATTAGGAACACCA+TGG 0.708357 1_2:+9075669 None:intergenic
GATCAAGAACATAAGCGACA+AGG 0.725331 1_2:-9075425 Msa0054310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATAGATAATAAAAGA+TGG - chr1_2:9075767-9075786 Msa0054310:intron 10.0%
!! AATATATAGATAATAAAAGA+TGG - chr1_2:9075767-9075786 Msa0054310:intron 10.0%
!!! ATCTTTTAATTTTGCTTATT+AGG - chr1_2:9075228-9075247 Msa0054310:three_prime_UTR 15.0%
!!! TTACTTCATTTACTAATTTT+AGG - chr1_2:9076016-9076035 Msa0054310:intron 15.0%
!!! ATCTTTTAATTTTGCTTATT+AGG - chr1_2:9075228-9075247 Msa0054310:three_prime_UTR 15.0%
!!! TTACTTCATTTACTAATTTT+AGG - chr1_2:9076016-9076035 Msa0054310:intron 15.0%
!! ATGATAAGGTAACTAATTAT+TGG - chr1_2:9075106-9075125 Msa0054310:three_prime_UTR 20.0%
!!! TTAACAATTTTGATGTGTTT+AGG - chr1_2:9075290-9075309 Msa0054310:three_prime_UTR 20.0%
!! ATAAGTTCAAATCATCAAAT+TGG - chr1_2:9075453-9075472 Msa0054310:CDS 20.0%
!! TAAGTTCAAATCATCAAATT+GGG - chr1_2:9075454-9075473 Msa0054310:CDS 20.0%
!!! AGGTATATACATATTTTATG+TGG - chr1_2:9075891-9075910 Msa0054310:intron 20.0%
!! TGATTCTATGAAAAAAATTG+TGG - chr1_2:9075975-9075994 Msa0054310:CDS 20.0%
!!! AATTCTTTACACTTGTATTT+TGG + chr1_2:9076430-9076449 None:intergenic 20.0%
!! ACTTAGATAGTATCAAAATA+TGG - chr1_2:9076460-9076479 Msa0054310:intron 20.0%
!!! AAGTAAATTTTCTTTCCTTT+CGG + chr1_2:9076519-9076538 None:intergenic 20.0%
!! ATGATAAGGTAACTAATTAT+TGG - chr1_2:9075106-9075125 Msa0054310:three_prime_UTR 20.0%
!!! TTAACAATTTTGATGTGTTT+AGG - chr1_2:9075290-9075309 Msa0054310:three_prime_UTR 20.0%
!! ATAAGTTCAAATCATCAAAT+TGG - chr1_2:9075453-9075472 Msa0054310:CDS 20.0%
!! TAAGTTCAAATCATCAAATT+GGG - chr1_2:9075454-9075473 Msa0054310:CDS 20.0%
!!! AGGTATATACATATTTTATG+TGG - chr1_2:9075891-9075910 Msa0054310:intron 20.0%
!! TGATTCTATGAAAAAAATTG+TGG - chr1_2:9075975-9075994 Msa0054310:CDS 20.0%
!!! AATTCTTTACACTTGTATTT+TGG + chr1_2:9076430-9076449 None:intergenic 20.0%
!! ACTTAGATAGTATCAAAATA+TGG - chr1_2:9076460-9076479 Msa0054310:intron 20.0%
!!! AAGTAAATTTTCTTTCCTTT+CGG + chr1_2:9076519-9076538 None:intergenic 20.0%
!!! ATTGGTTTTTTTGTTGTTGA+AGG - chr1_2:9075124-9075143 Msa0054310:three_prime_UTR 25.0%
!!! TTTGTTGTTGAAGGAATTAT+TGG - chr1_2:9075133-9075152 Msa0054310:three_prime_UTR 25.0%
! GGTTTCTTATTATACTTAGT+AGG - chr1_2:9075154-9075173 Msa0054310:three_prime_UTR 25.0%
! TCATCTTCAAGAAATCAAAA+AGG - chr1_2:9075413-9075432 Msa0054310:CDS 25.0%
! AAATCAAAAAGGAAGAACAT+AGG - chr1_2:9075424-9075443 Msa0054310:CDS 25.0%
! AATCAAAAAGGAAGAACATA+GGG - chr1_2:9075425-9075444 Msa0054310:CDS 25.0%
!! ACAACAAATTAGTGATAATG+AGG + chr1_2:9075590-9075609 None:intergenic 25.0%
! TAATAAAAGATGGCTATCAA+TGG - chr1_2:9075777-9075796 Msa0054310:intron 25.0%
!!! TGTATATACCTTCTTTTTTG+CGG + chr1_2:9075882-9075901 None:intergenic 25.0%
! TGCAAAAATGCATAAATGAT+AGG - chr1_2:9076039-9076058 Msa0054310:intron 25.0%
!! AAATCTCGATTTGAATCTTT+CGG - chr1_2:9076367-9076386 Msa0054310:CDS 25.0%
!! TTTTGATACTATCTAAGTAC+TGG + chr1_2:9076458-9076477 None:intergenic 25.0%
!!! ATTGGTTTTTTTGTTGTTGA+AGG - chr1_2:9075124-9075143 Msa0054310:three_prime_UTR 25.0%
!!! TTTGTTGTTGAAGGAATTAT+TGG - chr1_2:9075133-9075152 Msa0054310:three_prime_UTR 25.0%
! GGTTTCTTATTATACTTAGT+AGG - chr1_2:9075154-9075173 Msa0054310:three_prime_UTR 25.0%
! TCATCTTCAAGAAATCAAAA+AGG - chr1_2:9075413-9075432 Msa0054310:CDS 25.0%
! AAATCAAAAAGGAAGAACAT+AGG - chr1_2:9075424-9075443 Msa0054310:CDS 25.0%
! AATCAAAAAGGAAGAACATA+GGG - chr1_2:9075425-9075444 Msa0054310:CDS 25.0%
!! ACAACAAATTAGTGATAATG+AGG + chr1_2:9075590-9075609 None:intergenic 25.0%
! TAATAAAAGATGGCTATCAA+TGG - chr1_2:9075777-9075796 Msa0054310:intron 25.0%
!!! TGTATATACCTTCTTTTTTG+CGG + chr1_2:9075882-9075901 None:intergenic 25.0%
! TGCAAAAATGCATAAATGAT+AGG - chr1_2:9076039-9076058 Msa0054310:intron 25.0%
!! AAATCTCGATTTGAATCTTT+CGG - chr1_2:9076367-9076386 Msa0054310:CDS 25.0%
!! TTTTGATACTATCTAAGTAC+TGG + chr1_2:9076458-9076477 None:intergenic 25.0%
!! ACAATTTTGATGTGTTTAGG+TGG - chr1_2:9075293-9075312 Msa0054310:three_prime_UTR 30.0%
ATCAAAAAGGAAGAACATAG+GGG - chr1_2:9075426-9075445 Msa0054310:CDS 30.0%
! CTTTTGCTTGAATCAATGTT+AGG + chr1_2:9075486-9075505 None:intergenic 30.0%
TCAACCTAATGATGAAAGTT+TGG - chr1_2:9075560-9075579 Msa0054310:CDS 30.0%
CATACCAAACTTTCATCATT+AGG + chr1_2:9075567-9075586 None:intergenic 30.0%
!!! TATATACCTTCTTTTTTGCG+GGG + chr1_2:9075880-9075899 None:intergenic 30.0%
!!! GTATATACCTTCTTTTTTGC+GGG + chr1_2:9075881-9075900 None:intergenic 30.0%
TGATTTCAAGAAAGCTTACA+AGG - chr1_2:9075927-9075946 Msa0054310:CDS 30.0%
TTAGAGATTGATGAACCTTT+AGG + chr1_2:9076143-9076162 None:intergenic 30.0%
TCTTTGTCATTCAATGTTGT+TGG + chr1_2:9076176-9076195 None:intergenic 30.0%
AAAATTTACTTGCGACGTTT+GGG - chr1_2:9076528-9076547 Msa0054310:intron 30.0%
CGAAGAGATAAACTCAAATA+AGG + chr1_2:9076557-9076576 None:intergenic 30.0%
!! GTTGTTTTCATAAGTTGTCA+AGG + chr1_2:9076668-9076687 None:intergenic 30.0%
!! ACAATTTTGATGTGTTTAGG+TGG - chr1_2:9075293-9075312 Msa0054310:three_prime_UTR 30.0%
ATCAAAAAGGAAGAACATAG+GGG - chr1_2:9075426-9075445 Msa0054310:CDS 30.0%
! CTTTTGCTTGAATCAATGTT+AGG + chr1_2:9075486-9075505 None:intergenic 30.0%
TCAACCTAATGATGAAAGTT+TGG - chr1_2:9075560-9075579 Msa0054310:CDS 30.0%
CATACCAAACTTTCATCATT+AGG + chr1_2:9075567-9075586 None:intergenic 30.0%
!!! TATATACCTTCTTTTTTGCG+GGG + chr1_2:9075880-9075899 None:intergenic 30.0%
!!! GTATATACCTTCTTTTTTGC+GGG + chr1_2:9075881-9075900 None:intergenic 30.0%
TGATTTCAAGAAAGCTTACA+AGG - chr1_2:9075927-9075946 Msa0054310:CDS 30.0%
TTAGAGATTGATGAACCTTT+AGG + chr1_2:9076143-9076162 None:intergenic 30.0%
TCTTTGTCATTCAATGTTGT+TGG + chr1_2:9076176-9076195 None:intergenic 30.0%
AAAATTTACTTGCGACGTTT+GGG - chr1_2:9076528-9076547 Msa0054310:intron 30.0%
CGAAGAGATAAACTCAAATA+AGG + chr1_2:9076557-9076576 None:intergenic 30.0%
!! GTTGTTTTCATAAGTTGTCA+AGG + chr1_2:9076668-9076687 None:intergenic 30.0%
GGCTATTAGAATGGATGATA+AGG - chr1_2:9075092-9075111 Msa0054310:three_prime_UTR 35.0%
TAAAAGATGGCTATCAATGG+AGG - chr1_2:9075780-9075799 Msa0054310:intron 35.0%
ATCCTTGTTGCAACATATGA+TGG - chr1_2:9076065-9076084 Msa0054310:intron 35.0%
GATGGTTTGAATGACTCATT+AGG + chr1_2:9076110-9076129 None:intergenic 35.0%
CTCACAAAGTCTAGTATTTG+TGG + chr1_2:9076201-9076220 None:intergenic 35.0%
GAAGTCAGGATCTTTGATTA+GGG + chr1_2:9076282-9076301 None:intergenic 35.0%
TGAAGTCAGGATCTTTGATT+AGG + chr1_2:9076283-9076302 None:intergenic 35.0%
CTTATGTTCTTGATCAGTGA+CGG + chr1_2:9076336-9076355 None:intergenic 35.0%
GAAAATTTACTTGCGACGTT+TGG - chr1_2:9076527-9076546 Msa0054310:intron 35.0%
TATCTCTTCGTATAAGCACT+TGG - chr1_2:9076567-9076586 Msa0054310:intron 35.0%
ATAAGCACTTGGAGACTATT+TGG - chr1_2:9076578-9076597 Msa0054310:intron 35.0%
TAAGCACTTGGAGACTATTT+GGG - chr1_2:9076579-9076598 Msa0054310:intron 35.0%
GGCTATTAGAATGGATGATA+AGG - chr1_2:9075092-9075111 Msa0054310:three_prime_UTR 35.0%
TAAAAGATGGCTATCAATGG+AGG - chr1_2:9075780-9075799 Msa0054310:intron 35.0%
ATCCTTGTTGCAACATATGA+TGG - chr1_2:9076065-9076084 Msa0054310:intron 35.0%
GATGGTTTGAATGACTCATT+AGG + chr1_2:9076110-9076129 None:intergenic 35.0%
CTCACAAAGTCTAGTATTTG+TGG + chr1_2:9076201-9076220 None:intergenic 35.0%
GAAGTCAGGATCTTTGATTA+GGG + chr1_2:9076282-9076301 None:intergenic 35.0%
TGAAGTCAGGATCTTTGATT+AGG + chr1_2:9076283-9076302 None:intergenic 35.0%
CTTATGTTCTTGATCAGTGA+CGG + chr1_2:9076336-9076355 None:intergenic 35.0%
GAAAATTTACTTGCGACGTT+TGG - chr1_2:9076527-9076546 Msa0054310:intron 35.0%
TATCTCTTCGTATAAGCACT+TGG - chr1_2:9076567-9076586 Msa0054310:intron 35.0%
ATAAGCACTTGGAGACTATT+TGG - chr1_2:9076578-9076597 Msa0054310:intron 35.0%
TAAGCACTTGGAGACTATTT+GGG - chr1_2:9076579-9076598 Msa0054310:intron 35.0%
AGAGTTACAACAAGTGAGAG+AGG - chr1_2:9075329-9075348 Msa0054310:three_prime_UTR 40.0%
GTTCGTACAAAGACTTGTAG+TGG + chr1_2:9075540-9075559 None:intergenic 40.0%
! ATGGAGGAAGTATGGTCAAA+AGG - chr1_2:9075796-9075815 Msa0054310:intron 40.0%
!! TCTAGGAGAAGCATTGTCTT+TGG + chr1_2:9075825-9075844 None:intergenic 40.0%
CTTCTCCTAGAGCTTACTTT+AGG - chr1_2:9075834-9075853 Msa0054310:intron 40.0%
CTCCATCATATGTTGCAACA+AGG + chr1_2:9076070-9076089 None:intergenic 40.0%
ATGACTCATTAGGAACACCA+TGG + chr1_2:9076100-9076119 None:intergenic 40.0%
GATTGATGAACCTTTAGGTG+TGG + chr1_2:9076138-9076157 None:intergenic 40.0%
GAGAATGTCATGCAACAGTT+TGG - chr1_2:9076218-9076237 Msa0054310:CDS 40.0%
GATCAAGAACATAAGCGACA+AGG - chr1_2:9076341-9076360 Msa0054310:CDS 40.0%
! TCTCGATTTGAATCTTTCGG+AGG - chr1_2:9076370-9076389 Msa0054310:CDS 40.0%
GGAGTGAAATGAAGGTTTCT+TGG - chr1_2:9076391-9076410 Msa0054310:CDS 40.0%
AGTTCAGTGATATCACCGAA+AGG - chr1_2:9076501-9076520 Msa0054310:intron 40.0%
AGAGTTACAACAAGTGAGAG+AGG - chr1_2:9075329-9075348 Msa0054310:three_prime_UTR 40.0%
GTTCGTACAAAGACTTGTAG+TGG + chr1_2:9075540-9075559 None:intergenic 40.0%
! ATGGAGGAAGTATGGTCAAA+AGG - chr1_2:9075796-9075815 Msa0054310:intron 40.0%
!! TCTAGGAGAAGCATTGTCTT+TGG + chr1_2:9075825-9075844 None:intergenic 40.0%
CTTCTCCTAGAGCTTACTTT+AGG - chr1_2:9075834-9075853 Msa0054310:intron 40.0%
CTCCATCATATGTTGCAACA+AGG + chr1_2:9076070-9076089 None:intergenic 40.0%
ATGACTCATTAGGAACACCA+TGG + chr1_2:9076100-9076119 None:intergenic 40.0%
GATTGATGAACCTTTAGGTG+TGG + chr1_2:9076138-9076157 None:intergenic 40.0%
GAGAATGTCATGCAACAGTT+TGG - chr1_2:9076218-9076237 Msa0054310:CDS 40.0%
GATCAAGAACATAAGCGACA+AGG - chr1_2:9076341-9076360 Msa0054310:CDS 40.0%
! TCTCGATTTGAATCTTTCGG+AGG - chr1_2:9076370-9076389 Msa0054310:CDS 40.0%
GGAGTGAAATGAAGGTTTCT+TGG - chr1_2:9076391-9076410 Msa0054310:CDS 40.0%
AGTTCAGTGATATCACCGAA+AGG - chr1_2:9076501-9076520 Msa0054310:intron 40.0%
! TGTAGTGGCTTTTGTGCTGT+GGG + chr1_2:9075525-9075544 None:intergenic 45.0%
! TTGTAGTGGCTTTTGTGCTG+TGG + chr1_2:9075526-9075545 None:intergenic 45.0%
GGCTATCAATGGAGGAAGTA+TGG - chr1_2:9075788-9075807 Msa0054310:intron 45.0%
GAGCACCTAAAGTAAGCTCT+AGG + chr1_2:9075842-9075861 None:intergenic 45.0%
AGCTTACTTTAGGTGCTCCA+TGG - chr1_2:9075844-9075863 Msa0054310:intron 45.0%
!!! TTCTTTTTTGCGGGGCAACT+AGG + chr1_2:9075872-9075891 None:intergenic 45.0%
TAGTTGCCCCGCAAAAAAGA+AGG - chr1_2:9075871-9075890 Msa0054310:intron 45.0%
! TATGATGGAGAGCACAACCA+TGG - chr1_2:9076080-9076099 Msa0054310:intron 45.0%
CCTTTAGGTGTGGATGAAGA+TGG + chr1_2:9076128-9076147 None:intergenic 45.0%
CCATCTTCATCCACACCTAA+AGG - chr1_2:9076125-9076144 Msa0054310:intron 45.0%
GTCATGCAACAGTTTGGCTA+TGG - chr1_2:9076224-9076243 Msa0054310:CDS 45.0%
TGCAACAGTTTGGCTATGGA+AGG - chr1_2:9076228-9076247 Msa0054310:CDS 45.0%
CTTTCGGAGGAGTGAAATGA+AGG - chr1_2:9076383-9076402 Msa0054310:CDS 45.0%
! TGTAGTGGCTTTTGTGCTGT+GGG + chr1_2:9075525-9075544 None:intergenic 45.0%
! TTGTAGTGGCTTTTGTGCTG+TGG + chr1_2:9075526-9075545 None:intergenic 45.0%
GGCTATCAATGGAGGAAGTA+TGG - chr1_2:9075788-9075807 Msa0054310:intron 45.0%
GAGCACCTAAAGTAAGCTCT+AGG + chr1_2:9075842-9075861 None:intergenic 45.0%
AGCTTACTTTAGGTGCTCCA+TGG - chr1_2:9075844-9075863 Msa0054310:intron 45.0%
!!! TTCTTTTTTGCGGGGCAACT+AGG + chr1_2:9075872-9075891 None:intergenic 45.0%
TAGTTGCCCCGCAAAAAAGA+AGG - chr1_2:9075871-9075890 Msa0054310:intron 45.0%
! TATGATGGAGAGCACAACCA+TGG - chr1_2:9076080-9076099 Msa0054310:intron 45.0%
CCTTTAGGTGTGGATGAAGA+TGG + chr1_2:9076128-9076147 None:intergenic 45.0%
CCATCTTCATCCACACCTAA+AGG - chr1_2:9076125-9076144 Msa0054310:intron 45.0%
GTCATGCAACAGTTTGGCTA+TGG - chr1_2:9076224-9076243 Msa0054310:CDS 45.0%
TGCAACAGTTTGGCTATGGA+AGG - chr1_2:9076228-9076247 Msa0054310:CDS 45.0%
CTTTCGGAGGAGTGAAATGA+AGG - chr1_2:9076383-9076402 Msa0054310:CDS 45.0%
GCTAATGCTGCAGTGAAGTC+AGG + chr1_2:9076296-9076315 None:intergenic 50.0%
GCTAATGCTGCAGTGAAGTC+AGG + chr1_2:9076296-9076315 None:intergenic 50.0%
TGCGGGGCAACTAGGAGCCA+TGG + chr1_2:9075864-9075883 None:intergenic 65.0%
TGCGGGGCAACTAGGAGCCA+TGG + chr1_2:9075864-9075883 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 9075090 9076698 9075090 ID=Msa0054310;Name=Msa0054310
chr1_2 mRNA 9075090 9076698 9075090 ID=Msa0054310-mRNA-1;Parent=Msa0054310;Name=Msa0054310-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0.66|0.5|1|1|1|4|301|256
chr1_2 exon 9075090 9075750 9075090 ID=Msa0054310-mRNA-1:exon:3260;Parent=Msa0054310-mRNA-1
chr1_2 exon 9075896 9076012 9075896 ID=Msa0054310-mRNA-1:exon:3259;Parent=Msa0054310-mRNA-1
chr1_2 exon 9076207 9076476 9076207 ID=Msa0054310-mRNA-1:exon:3258;Parent=Msa0054310-mRNA-1
chr1_2 exon 9076675 9076698 9076675 ID=Msa0054310-mRNA-1:exon:3257;Parent=Msa0054310-mRNA-1
chr1_2 CDS 9076675 9076698 9076675 ID=Msa0054310-mRNA-1:cds;Parent=Msa0054310-mRNA-1
chr1_2 CDS 9076207 9076476 9076207 ID=Msa0054310-mRNA-1:cds;Parent=Msa0054310-mRNA-1
chr1_2 CDS 9075896 9076012 9075896 ID=Msa0054310-mRNA-1:cds;Parent=Msa0054310-mRNA-1
chr1_2 CDS 9075391 9075750 9075391 ID=Msa0054310-mRNA-1:cds;Parent=Msa0054310-mRNA-1
chr1_2 three_prime_UTR 9075090 9075390 9075090 ID=Msa0054310-mRNA-1:three_prime_utr;Parent=Msa0054310-mRNA-1
Gene Sequence

>Msa0054310

ATGGCTATTAGAATGGATGATAAGGTGGAAACTCTTGAATTAGAGTTACAACAAGTGAGAGAGGAGAACAATACTCTAAGATTCATGCTTGAAGTTATGAGTATCAAATGCACAAAGCTTGAATCTCATCTTCAAGAAATCAAAAAGGAAGAACATAGGGGAATCATAAGTTCAAATCATCAAATTGGGTCAATACCTAACATTGATTCAAGCAAAAGAGCAAGACTAGAGATTCCCACAGCACAAAAGCCACTACAAGTCTTTGTACGAACTCAACCTAATGATGAAAGTTTGATAATAAAAGATGGCTATCAATGGAGGAAGTATGGTCAAAAGGTTACCAAAGACAATGCTTCTCCTAGAGCTTACTTTAGGTGCTCCATGGCTCCTAGTTGCCCCGCAAAAAAGAAGGTGCAAAAATGCATAAATGATAGGTCTATCCTTGTTGCAACATATGATGGAGAGCACAACCATGGTGTTCCTAATGAGTCATTCAAACCATCTTCATCCACACCTAAAGGTTCATCAATCTCTAATAATAAATTACCAACAACATTGAATGACAAAGAAGCCACAAATACTAGACTTTGTGAGAATGTCATGCAACAGTTTGGCTATGGAAGGCACATTAAAATTGAAGAATATGCAAGTTCCCTAATCAAAGATCCTGACTTCACTGCAGCATTAGCTGAAGCAGTTGCTCGAACCGTCACTGATCAAGAACATAAGCGACAAGGTCTAAATCTCGATTTGAATCTTTCGGAGGAGTGA
Protein sequence

>Msa0054310

MAIRMDDKVETLELELQQVREENNTLRFMLEVMSIKCTKLESHLQEIKKEEHRGIISSNHQIGSIPNIDSSKRARLEIPTAQKPLQVFVRTQPNDESLIIKDGYQWRKYGQKVTKDNASPRAYFRCSMAPSCPAKKKVQKCINDRSILVATYDGEHNHGVPNESFKPSSSTPKGSSISNNKLPTTLNDKEATNTRLCENVMQQFGYGRHIKIEEYASSLIKDPDFTAALAEAVARTVTDQEHKRQGLNLDLNLSEE*