Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154080 | XP_003623638.1 | 92.226 | 283 | 14 | 2 | 1 | 275 | 1 | 283 | 0.0 | 538 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154080 | sp|Q9LY00|WRK70_ARATH | 41.436 | 181 | 82 | 4 | 13 | 180 | 10 | 179 | 1.77e-37 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154080 | G7KY68 | 92.226 | 283 | 14 | 2 | 1 | 275 | 1 | 283 | 0.0 | 538 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1154080 | TF | WRKY |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0054240 | Msa1154080 | 0.860203 | 2.433490e-63 | -8.615850e-47 |
| Msa0054250 | Msa1154080 | 0.829382 | 5.311094e-55 | -8.615850e-47 |
| Msa0054260 | Msa1154080 | 0.819546 | 1.097135e-52 | -8.615850e-47 |
| Msa0054310 | Msa1154080 | 0.856001 | 4.321714e-62 | -8.615850e-47 |
| Msa0054330 | Msa1154080 | 0.860205 | 2.429042e-63 | -8.615850e-47 |
| Msa0055710 | Msa1154080 | 0.826094 | 3.275896e-54 | -8.615850e-47 |
| Msa0057890 | Msa1154080 | 0.803431 | 3.497228e-49 | -8.615850e-47 |
| Msa0085290 | Msa1154080 | 0.808769 | 2.632209e-50 | -8.615850e-47 |
| Msa0100070 | Msa1154080 | 0.875462 | 3.022803e-68 | -8.615850e-47 |
| Msa0100080 | Msa1154080 | 0.814422 | 1.553539e-51 | -8.615850e-47 |
| Msa0100090 | Msa1154080 | 0.824997 | 5.959327e-54 | -8.615850e-47 |
| Msa0623080 | Msa1154080 | 0.805466 | 1.317018e-49 | -8.615850e-47 |
| Msa0658990 | Msa1154080 | 0.817384 | 3.391526e-52 | -8.615850e-47 |
| Msa0677920 | Msa1154080 | 0.800797 | 1.217679e-48 | -8.615850e-47 |
| Msa0689010 | Msa1154080 | 0.806788 | 6.940578e-50 | -8.615850e-47 |
| Msa0696740 | Msa1154080 | 0.830398 | 3.003147e-55 | -8.615850e-47 |
| Msa0696770 | Msa1154080 | 0.829950 | 3.863251e-55 | -8.615850e-47 |
| Msa0141230 | Msa1154080 | 0.829624 | 4.639392e-55 | -8.615850e-47 |
| Msa0148720 | Msa1154080 | 0.856400 | 3.300420e-62 | -8.615850e-47 |
| Msa0153450 | Msa1154080 | 0.817182 | 3.765496e-52 | -8.615850e-47 |
| Msa0173990 | Msa1154080 | 0.828918 | 6.882354e-55 | -8.615850e-47 |
| Msa0197660 | Msa1154080 | 0.819603 | 1.065053e-52 | -8.615850e-47 |
| Msa0212310 | Msa1154080 | 0.832258 | 1.047221e-55 | -8.615850e-47 |
| Msa0377800 | Msa1154080 | 0.811304 | 7.486854e-51 | -8.615850e-47 |
| Msa0415520 | Msa1154080 | 0.815472 | 9.085330e-52 | -8.615850e-47 |
| Msa0426600 | Msa1154080 | 0.825239 | 5.222908e-54 | -8.615850e-47 |
| Msa0998000 | Msa1154080 | 0.814777 | 1.295993e-51 | -8.615850e-47 |
| Msa1026500 | Msa1154080 | 0.896987 | 2.175181e-76 | -8.615850e-47 |
| Msa1026510 | Msa1154080 | 0.973395 | 2.349543e-136 | -8.615850e-47 |
| Msa1029090 | Msa1154080 | 0.816402 | 5.633973e-52 | -8.615850e-47 |
| Msa1074570 | Msa1154080 | 0.869639 | 2.663305e-66 | -8.615850e-47 |
| Msa1074580 | Msa1154080 | 0.974614 | 1.817651e-138 | -8.615850e-47 |
| Msa0239800 | Msa1154080 | 0.817411 | 3.344596e-52 | -8.615850e-47 |
| Msa0245880 | Msa1154080 | 0.819219 | 1.303147e-52 | -8.615850e-47 |
| Msa0317510 | Msa1154080 | 0.823317 | 1.478517e-53 | -8.615850e-47 |
| Msa1107800 | Msa1154080 | 0.821491 | 3.924485e-53 | -8.615850e-47 |
| Msa1111750 | Msa1154080 | 0.963129 | 1.042726e-121 | -8.615850e-47 |
| Msa1111760 | Msa1154080 | 0.886929 | 2.229425e-72 | -8.615850e-47 |
| Msa1121660 | Msa1154080 | 0.806728 | 7.145598e-50 | -8.615850e-47 |
| Msa1145760 | Msa1154080 | 0.801528 | 8.630637e-49 | -8.615850e-47 |
| Msa1154070 | Msa1154080 | 0.887485 | 1.368901e-72 | -8.615850e-47 |
| Msa1154080 | Msa1156180 | 0.821390 | 4.140892e-53 | -8.615850e-47 |
| Msa1154080 | Msa1177070 | 0.817144 | 3.839422e-52 | -8.615850e-47 |
| Msa1154080 | Msa1179120 | 0.828945 | 6.778113e-55 | -8.615850e-47 |
| Msa1154080 | Msa1314170 | 0.834465 | 2.951395e-56 | -8.615850e-47 |
| Msa1154080 | Msa1316980 | 0.818731 | 1.682452e-52 | -8.615850e-47 |
| Msa1154080 | Msa1381940 | 0.829742 | 4.342133e-55 | -8.615850e-47 |
| Msa1154080 | Msa1398540 | 0.800629 | 1.317641e-48 | -8.615850e-47 |
| Msa1154080 | Msa1463670 | 0.800296 | 1.540744e-48 | -8.615850e-47 |
| Msa0506300 | Msa1154080 | 0.806660 | 7.383975e-50 | -8.615850e-47 |
| Msa0517570 | Msa1154080 | 0.813212 | 2.869004e-51 | -8.615850e-47 |
| Msa0559250 | Msa1154080 | 0.813944 | 1.980557e-51 | -8.615850e-47 |
| Msa0568440 | Msa1154080 | 0.820864 | 5.474353e-53 | -8.615850e-47 |
| Msa0599080 | Msa1154080 | 0.805401 | 1.359087e-49 | -8.615850e-47 |
| Msa0897810 | Msa1154080 | 0.833296 | 5.785351e-56 | -8.615850e-47 |
| Msa0963240 | Msa1154080 | 0.803711 | 3.060461e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154080 | MtrunA17_Chr7g0244981 | 92.226 | 283 | 14 | 2 | 1 | 275 | 1 | 283 | 0.0 | 538 |
| Msa1154080 | MtrunA17_Chr7g0244971 | 81.973 | 294 | 34 | 4 | 1 | 275 | 1 | 294 | 1.60e-175 | 485 |
| Msa1154080 | MtrunA17_Chr8g0350621 | 43.952 | 248 | 121 | 7 | 12 | 253 | 5 | 240 | 1.94e-62 | 197 |
| Msa1154080 | MtrunA17_Chr8g0334541 | 50.485 | 206 | 87 | 5 | 15 | 218 | 6 | 198 | 1.49e-60 | 193 |
| Msa1154080 | MtrunA17_Chr2g0315371 | 38.783 | 263 | 124 | 8 | 1 | 229 | 1 | 260 | 1.74e-47 | 160 |
| Msa1154080 | MtrunA17_Chr2g0315381 | 39.130 | 253 | 125 | 5 | 6 | 229 | 7 | 259 | 2.19e-43 | 149 |
| Msa1154080 | MtrunA17_Chr2g0315361 | 38.372 | 258 | 122 | 7 | 10 | 231 | 12 | 268 | 1.01e-38 | 137 |
| Msa1154080 | MtrunA17_Chr5g0428351 | 38.362 | 232 | 109 | 13 | 1 | 228 | 78 | 279 | 2.82e-36 | 131 |
| Msa1154080 | MtrunA17_Chr3g0128671 | 43.386 | 189 | 84 | 9 | 20 | 195 | 23 | 201 | 3.59e-35 | 128 |
| Msa1154080 | MtrunA17_Chr8g0350631 | 67.532 | 77 | 24 | 1 | 142 | 218 | 5 | 80 | 6.84e-31 | 112 |
| Msa1154080 | MtrunA17_Chr7g0275531 | 34.848 | 198 | 100 | 5 | 11 | 194 | 9 | 191 | 6.90e-28 | 109 |
| Msa1154080 | MtrunA17_Chr3g0126391 | 33.498 | 203 | 102 | 4 | 9 | 185 | 2 | 197 | 2.34e-26 | 105 |
| Msa1154080 | MtrunA17_Chr8g0387981 | 33.663 | 202 | 101 | 7 | 1 | 180 | 1 | 191 | 6.00e-24 | 99.4 |
| Msa1154080 | MtrunA17_Chr8g0347251 | 52.941 | 85 | 32 | 1 | 104 | 180 | 111 | 195 | 2.27e-23 | 97.4 |
| Msa1154080 | MtrunA17_Chr7g0224801 | 55.932 | 59 | 23 | 1 | 121 | 179 | 93 | 148 | 4.67e-16 | 73.9 |
| Msa1154080 | MtrunA17_Chr8g0350641 | 35.294 | 136 | 78 | 4 | 13 | 141 | 7 | 139 | 7.60e-16 | 72.8 |
| Msa1154080 | MtrunA17_Chr5g0431811 | 42.667 | 75 | 42 | 1 | 117 | 190 | 668 | 742 | 4.82e-15 | 75.1 |
| Msa1154080 | MtrunA17_Chr2g0315401 | 56.897 | 58 | 24 | 1 | 149 | 205 | 19 | 76 | 1.26e-14 | 69.7 |
| Msa1154080 | MtrunA17_Chr8g0383351 | 42.169 | 83 | 38 | 3 | 96 | 178 | 142 | 214 | 4.84e-14 | 69.7 |
| Msa1154080 | MtrunA17_Chr5g0418781 | 38.710 | 93 | 53 | 2 | 121 | 212 | 124 | 213 | 9.16e-14 | 69.7 |
| Msa1154080 | MtrunA17_Chr1g0194481 | 50.847 | 59 | 26 | 1 | 121 | 179 | 158 | 213 | 1.27e-13 | 69.7 |
| Msa1154080 | MtrunA17_Chr7g0270831 | 39.316 | 117 | 65 | 3 | 65 | 178 | 158 | 271 | 1.59e-13 | 70.1 |
| Msa1154080 | MtrunA17_Chr3g0129361 | 49.153 | 59 | 27 | 1 | 121 | 179 | 144 | 199 | 3.81e-13 | 67.0 |
| Msa1154080 | MtrunA17_Chr7g0270191 | 50.847 | 59 | 26 | 1 | 121 | 179 | 145 | 200 | 4.06e-13 | 68.2 |
| Msa1154080 | MtrunA17_Chr2g0322391 | 36.449 | 107 | 65 | 2 | 96 | 202 | 325 | 428 | 5.15e-13 | 68.9 |
| Msa1154080 | MtrunA17_Chr8g0348311 | 44.872 | 78 | 39 | 2 | 104 | 179 | 136 | 211 | 8.44e-13 | 67.4 |
| Msa1154080 | MtrunA17_Chr4g0051881 | 51.724 | 58 | 25 | 1 | 121 | 178 | 178 | 232 | 9.55e-13 | 67.4 |
| Msa1154080 | MtrunA17_Chr3g0099641 | 38.384 | 99 | 58 | 2 | 104 | 202 | 235 | 330 | 1.25e-12 | 67.4 |
| Msa1154080 | MtrunA17_Chr5g0443131 | 50.000 | 58 | 26 | 1 | 121 | 178 | 157 | 211 | 1.38e-12 | 66.6 |
| Msa1154080 | MtrunA17_Chr8g0386241 | 35.577 | 104 | 62 | 2 | 75 | 178 | 59 | 157 | 1.66e-12 | 64.7 |
| Msa1154080 | MtrunA17_Chr8g0379461 | 36.893 | 103 | 53 | 2 | 115 | 217 | 70 | 160 | 1.69e-12 | 65.9 |
| Msa1154080 | MtrunA17_Chr8g0335811 | 43.529 | 85 | 43 | 2 | 94 | 178 | 129 | 208 | 4.38e-12 | 64.3 |
| Msa1154080 | MtrunA17_Chr1g0147881 | 36.842 | 95 | 56 | 3 | 85 | 178 | 226 | 317 | 5.21e-12 | 65.1 |
| Msa1154080 | MtrunA17_Chr2g0294231 | 47.458 | 59 | 28 | 1 | 121 | 179 | 203 | 258 | 5.55e-12 | 65.5 |
| Msa1154080 | MtrunA17_Chr4g0025061 | 33.846 | 130 | 75 | 3 | 77 | 206 | 325 | 443 | 6.06e-12 | 65.5 |
| Msa1154080 | MtrunA17_Chr4g0068541 | 44.828 | 58 | 29 | 1 | 121 | 178 | 208 | 262 | 7.57e-12 | 65.1 |
| Msa1154080 | MtrunA17_Chr2g0293481 | 35.185 | 108 | 56 | 2 | 83 | 178 | 217 | 322 | 8.11e-12 | 65.1 |
| Msa1154080 | MtrunA17_Chr7g0238921 | 51.724 | 58 | 25 | 1 | 121 | 178 | 124 | 178 | 1.44e-11 | 63.9 |
| Msa1154080 | MtrunA17_Chr4g0071521 | 40.000 | 85 | 40 | 3 | 102 | 178 | 219 | 300 | 1.62e-11 | 63.5 |
| Msa1154080 | MtrunA17_Chr4g0042831 | 48.276 | 58 | 27 | 1 | 121 | 178 | 278 | 332 | 1.70e-11 | 63.9 |
| Msa1154080 | MtrunA17_Chr2g0288871 | 38.384 | 99 | 50 | 2 | 80 | 178 | 273 | 360 | 2.29e-11 | 63.9 |
| Msa1154080 | MtrunA17_Chr1g0150801 | 32.800 | 125 | 68 | 4 | 66 | 179 | 38 | 157 | 2.90e-11 | 60.8 |
| Msa1154080 | MtrunA17_Chr2g0284321 | 39.785 | 93 | 52 | 3 | 87 | 178 | 1 | 90 | 4.88e-11 | 61.2 |
| Msa1154080 | MtrunA17_Chr2g0315341 | 45.000 | 80 | 37 | 3 | 158 | 232 | 2 | 79 | 6.03e-11 | 58.9 |
| Msa1154080 | MtrunA17_Chr7g0270051 | 38.614 | 101 | 56 | 2 | 82 | 178 | 10 | 108 | 8.96e-11 | 60.8 |
| Msa1154080 | MtrunA17_Chr2g0315391 | 36.585 | 123 | 54 | 7 | 1 | 106 | 1 | 116 | 9.45e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1154080 | AT3G56400.1 | 41.436 | 181 | 82 | 4 | 13 | 180 | 10 | 179 | 1.80e-38 | 137 |
| Msa1154080 | AT2G40750.1 | 35.885 | 209 | 102 | 8 | 3 | 180 | 4 | 211 | 1.33e-26 | 106 |
| Msa1154080 | AT1G66550.1 | 34.653 | 202 | 110 | 7 | 13 | 210 | 8 | 191 | 3.77e-26 | 103 |
| Msa1154080 | AT2G46400.1 | 31.301 | 246 | 116 | 8 | 14 | 234 | 8 | 225 | 1.06e-25 | 103 |
| Msa1154080 | AT1G66550.2 | 33.000 | 200 | 111 | 6 | 13 | 210 | 8 | 186 | 4.00e-25 | 100 |
| Msa1154080 | AT5G01900.1 | 34.896 | 192 | 103 | 5 | 13 | 197 | 7 | 183 | 4.39e-25 | 100 |
| Msa1154080 | AT5G22570.1 | 34.637 | 179 | 98 | 5 | 13 | 185 | 9 | 174 | 3.62e-24 | 99.0 |
| Msa1154080 | AT4G11070.1 | 36.041 | 197 | 95 | 6 | 11 | 180 | 8 | 200 | 1.40e-23 | 97.8 |
| Msa1154080 | AT1G66560.1 | 34.706 | 170 | 96 | 4 | 15 | 183 | 10 | 165 | 1.57e-23 | 96.7 |
| Msa1154080 | AT4G11070.2 | 37.079 | 178 | 87 | 5 | 11 | 180 | 8 | 168 | 2.02e-22 | 94.4 |
| Msa1154080 | AT2G40740.1 | 31.414 | 191 | 104 | 5 | 15 | 180 | 44 | 232 | 9.73e-22 | 92.4 |
| Msa1154080 | AT2G40740.3 | 31.414 | 191 | 104 | 5 | 15 | 180 | 53 | 241 | 1.08e-21 | 92.4 |
| Msa1154080 | AT1G66600.1 | 33.889 | 180 | 88 | 7 | 13 | 183 | 8 | 165 | 2.85e-21 | 90.1 |
| Msa1154080 | AT4G23810.1 | 49.412 | 85 | 35 | 1 | 104 | 180 | 133 | 217 | 1.44e-19 | 87.0 |
| Msa1154080 | AT1G80590.1 | 29.648 | 199 | 102 | 5 | 12 | 208 | 7 | 169 | 3.32e-19 | 84.3 |
| Msa1154080 | AT5G24110.1 | 33.146 | 178 | 92 | 4 | 23 | 185 | 12 | 177 | 1.20e-18 | 84.3 |
| Msa1154080 | AT5G45260.1 | 40.000 | 105 | 58 | 2 | 79 | 178 | 1161 | 1265 | 2.54e-15 | 76.3 |
| Msa1154080 | AT1G69310.4 | 38.017 | 121 | 57 | 5 | 68 | 178 | 89 | 201 | 3.87e-15 | 74.3 |
| Msa1154080 | AT1G69310.2 | 38.017 | 121 | 57 | 5 | 68 | 178 | 89 | 201 | 3.87e-15 | 74.3 |
| Msa1154080 | AT1G69310.1 | 38.017 | 121 | 57 | 5 | 68 | 178 | 89 | 201 | 3.87e-15 | 74.3 |
| Msa1154080 | AT5G13080.1 | 47.761 | 67 | 32 | 1 | 121 | 187 | 67 | 130 | 1.38e-13 | 67.0 |
| Msa1154080 | AT5G41570.1 | 51.724 | 58 | 25 | 1 | 121 | 178 | 98 | 152 | 1.56e-13 | 67.8 |
| Msa1154080 | AT4G04450.2 | 37.719 | 114 | 68 | 2 | 90 | 202 | 166 | 277 | 1.59e-13 | 70.5 |
| Msa1154080 | AT2G34830.2 | 35.246 | 122 | 65 | 3 | 62 | 178 | 167 | 279 | 2.21e-13 | 70.1 |
| Msa1154080 | AT2G34830.1 | 35.246 | 122 | 65 | 3 | 62 | 178 | 158 | 270 | 2.23e-13 | 70.1 |
| Msa1154080 | AT4G04450.1 | 37.719 | 114 | 68 | 2 | 90 | 202 | 260 | 371 | 2.34e-13 | 70.1 |
| Msa1154080 | AT5G49520.1 | 49.153 | 59 | 27 | 1 | 121 | 179 | 221 | 276 | 3.35e-13 | 69.3 |
| Msa1154080 | AT3G01970.1 | 42.045 | 88 | 40 | 2 | 121 | 208 | 65 | 141 | 3.74e-13 | 65.9 |
| Msa1154080 | AT1G64000.1 | 50.000 | 58 | 26 | 1 | 121 | 178 | 114 | 168 | 7.54e-13 | 66.2 |
| Msa1154080 | AT1G29860.1 | 42.308 | 78 | 41 | 2 | 106 | 182 | 120 | 194 | 8.51e-13 | 67.4 |
| Msa1154080 | AT2G47260.1 | 37.634 | 93 | 54 | 2 | 88 | 179 | 140 | 229 | 8.56e-13 | 67.8 |
| Msa1154080 | AT4G18170.1 | 42.169 | 83 | 44 | 2 | 104 | 185 | 154 | 233 | 1.30e-12 | 67.4 |
| Msa1154080 | AT2G37260.1 | 46.970 | 66 | 32 | 1 | 121 | 186 | 349 | 411 | 1.71e-12 | 67.4 |
| Msa1154080 | AT2G37260.2 | 46.970 | 66 | 32 | 1 | 121 | 186 | 267 | 329 | 2.12e-12 | 66.6 |
| Msa1154080 | AT2G37260.3 | 46.970 | 66 | 32 | 1 | 121 | 186 | 269 | 331 | 2.18e-12 | 66.6 |
| Msa1154080 | AT4G39410.1 | 40.000 | 90 | 49 | 2 | 89 | 178 | 193 | 277 | 2.25e-12 | 66.2 |
| Msa1154080 | AT2G23320.1 | 38.462 | 104 | 53 | 3 | 83 | 178 | 195 | 295 | 2.25e-12 | 66.6 |
| Msa1154080 | AT5G46350.1 | 46.154 | 65 | 32 | 1 | 121 | 185 | 183 | 244 | 2.51e-12 | 66.6 |
| Msa1154080 | AT2G46130.1 | 46.552 | 58 | 28 | 1 | 121 | 178 | 30 | 84 | 2.71e-12 | 62.4 |
| Msa1154080 | AT2G44745.1 | 48.276 | 58 | 27 | 1 | 121 | 178 | 145 | 199 | 4.28e-12 | 64.7 |
| Msa1154080 | AT1G62300.1 | 48.649 | 74 | 35 | 2 | 106 | 178 | 296 | 367 | 4.64e-12 | 66.2 |
| Msa1154080 | AT5G52830.1 | 38.596 | 114 | 54 | 4 | 126 | 235 | 170 | 271 | 5.78e-12 | 65.5 |
| Msa1154080 | AT4G01250.1 | 36.364 | 110 | 62 | 3 | 71 | 178 | 80 | 183 | 9.17e-12 | 64.7 |
| Msa1154080 | AT1G29280.1 | 46.667 | 60 | 30 | 1 | 119 | 178 | 72 | 129 | 1.27e-11 | 63.9 |
| Msa1154080 | AT1G68150.1 | 34.307 | 137 | 76 | 4 | 122 | 250 | 236 | 366 | 1.76e-11 | 64.3 |
| Msa1154080 | AT3G62340.1 | 43.590 | 78 | 36 | 2 | 121 | 198 | 118 | 187 | 2.32e-11 | 63.2 |
| Msa1154080 | AT5G26170.1 | 44.828 | 58 | 29 | 1 | 121 | 178 | 113 | 167 | 3.60e-11 | 61.2 |
| Msa1154080 | AT4G22070.4 | 54.386 | 57 | 24 | 1 | 122 | 178 | 298 | 352 | 3.69e-11 | 63.5 |
| Msa1154080 | AT4G22070.3 | 54.386 | 57 | 24 | 1 | 122 | 178 | 298 | 352 | 3.69e-11 | 63.5 |
| Msa1154080 | AT4G22070.2 | 54.386 | 57 | 24 | 1 | 122 | 178 | 298 | 352 | 3.69e-11 | 63.5 |
| Msa1154080 | AT4G22070.1 | 54.386 | 57 | 24 | 1 | 122 | 178 | 298 | 352 | 3.69e-11 | 63.5 |
| Msa1154080 | AT5G45050.4 | 35.185 | 108 | 56 | 3 | 81 | 178 | 993 | 1096 | 7.42e-11 | 63.2 |
| Msa1154080 | AT5G45050.1 | 35.185 | 108 | 56 | 3 | 81 | 178 | 1132 | 1235 | 7.47e-11 | 63.2 |
| Msa1154080 | AT5G45050.2 | 35.185 | 108 | 56 | 3 | 81 | 178 | 1104 | 1207 | 8.63e-11 | 62.8 |
| Msa1154080 | AT1G30650.1 | 46.774 | 62 | 31 | 1 | 117 | 178 | 213 | 272 | 8.75e-11 | 62.4 |
Find 84 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGGTTGGCTACCTTTAA+TGG | 0.150825 | 7_4:+41436146 | None:intergenic |
| TATTCACCATGTAAGGTTTC+AGG | 0.192748 | 7_4:-41436198 | Msa1154080:three_prime_UTR |
| GGATAATCCACCATGATTTC+AGG | 0.223815 | 7_4:+41436617 | None:intergenic |
| GTGGATCTTCTTGAATTCTT+TGG | 0.233438 | 7_4:+41436693 | None:intergenic |
| TTTAAGAAAGAGGCCAATTA+AGG | 0.247289 | 7_4:+41436366 | None:intergenic |
| TAAGTATCATTCATTGAAAA+TGG | 0.278557 | 7_4:+41435972 | None:intergenic |
| CACCAAATCTGAAGACTCTT+TGG | 0.292085 | 7_4:-41438477 | Msa1154080:CDS |
| GTTGGTTGGCTACCTTTAAT+GGG | 0.301437 | 7_4:+41436147 | None:intergenic |
| CATACATGATATCAGAAATA+TGG | 0.313913 | 7_4:+41436396 | None:intergenic |
| CTTCACAAGACAACCTATTC+TGG | 0.318721 | 7_4:-41436668 | Msa1154080:CDS |
| TTCCAAAGAGTCTTCAGATT+TGG | 0.321094 | 7_4:+41438475 | None:intergenic |
| GGTTATTGTTCAAGAACAAT+AGG | 0.331883 | 7_4:+41438528 | None:intergenic |
| TAAGTTGGTTTGCAAGTTGA+TGG | 0.334142 | 7_4:+41438654 | None:intergenic |
| TGTATGATGATGTCCTTAAT+TGG | 0.354460 | 7_4:-41436379 | Msa1154080:CDS |
| TTGCAAGAGTTCCATTGTTA+AGG | 0.357033 | 7_4:-41438447 | Msa1154080:CDS |
| ACTAATCTCAATCGAAAATC+TGG | 0.363566 | 7_4:+41436125 | None:intergenic |
| ATGCTTGTATTCACCATGTA+AGG | 0.381701 | 7_4:-41436205 | Msa1154080:three_prime_UTR |
| ATAAATATACCTTGGAAAAT+CGG | 0.383422 | 7_4:+41437563 | None:intergenic |
| AGAAAGGTGAGACCCATTAA+AGG | 0.392937 | 7_4:-41436159 | Msa1154080:three_prime_UTR |
| GGTCATCAGTGGAGAAAGTA+TGG | 0.398881 | 7_4:-41437606 | Msa1154080:CDS |
| CATTAAGAATATTTCTAAGT+TGG | 0.405861 | 7_4:+41438639 | None:intergenic |
| TTCAAAAGATCTTCAGCAAA+TGG | 0.413114 | 7_4:+41438578 | None:intergenic |
| AGAAATATTCTTAATGAAAG+TGG | 0.420955 | 7_4:-41438632 | Msa1154080:CDS |
| GAGAAAAGGACAGTCTTGTT+TGG | 0.421010 | 7_4:+41436541 | None:intergenic |
| CTCGGGAGGTTAGATAAATA+TGG | 0.426312 | 7_4:-41436040 | Msa1154080:three_prime_UTR |
| GTTATTGTTCAAGAACAATA+GGG | 0.426826 | 7_4:+41438529 | None:intergenic |
| CAGTCTTGTTTGGCTGGTGT+TGG | 0.428837 | 7_4:+41436551 | None:intergenic |
| TGGTGAATACAAGCATAGTT+TGG | 0.433588 | 7_4:+41436212 | None:intergenic |
| ATAGTTGATGAGTTGTTAAG+AGG | 0.433990 | 7_4:-41438677 | Msa1154080:CDS |
| GCAAGATTCTACAAGTATGA+TGG | 0.441895 | 7_4:+41436645 | None:intergenic |
| GATAATCCACCATGATTTCA+GGG | 0.452507 | 7_4:+41436618 | None:intergenic |
| AGTCTTGTTTGGCTGGTGTT+GGG | 0.452762 | 7_4:+41436552 | None:intergenic |
| GAGCTCTTATAATATATGTA+GGG | 0.463652 | 7_4:+41438832 | None:intergenic |
| CTTGCAAAACCCTGAAATCA+TGG | 0.466864 | 7_4:-41436627 | Msa1154080:CDS |
| AAAGGACAGTCTTGTTTGGC+TGG | 0.470880 | 7_4:+41436545 | None:intergenic |
| TGAGCTCTTATAATATATGT+AGG | 0.472308 | 7_4:+41438831 | None:intergenic |
| GATATTGTTCATCCACTCTC+TGG | 0.472425 | 7_4:-41436491 | Msa1154080:CDS |
| CACTGATGACCATCTTCCTC+AGG | 0.473789 | 7_4:+41437618 | None:intergenic |
| CACAATGTCAAGCAAAATAA+CGG | 0.478717 | 7_4:+41435900 | None:intergenic |
| CTTATCAACAAATTAAGAAA+AGG | 0.483043 | 7_4:-41435925 | Msa1154080:three_prime_UTR |
| AATCTAGCTCATGGTGGTCG+TGG | 0.489503 | 7_4:-41438704 | Msa1154080:CDS |
| CAGGAAAATTTCACAAACAT+GGG | 0.503777 | 7_4:-41437658 | Msa1154080:CDS |
| ACAAGTATGATGGCCAGAAT+AGG | 0.508994 | 7_4:+41436655 | None:intergenic |
| AAATCAGAGCCCTCAGAAGT+AGG | 0.513880 | 7_4:+41438506 | None:intergenic |
| TCTGAGCTGCCTGAGGAAGA+TGG | 0.519536 | 7_4:-41437627 | Msa1154080:CDS |
| GGTTTCAGGTTTGAACTCGA+TGG | 0.526256 | 7_4:-41436184 | Msa1154080:three_prime_UTR |
| ACAGGAAAATTTCACAAACA+TGG | 0.526761 | 7_4:-41437659 | Msa1154080:intron |
| AATCAGAGCCCTCAGAAGTA+GGG | 0.528391 | 7_4:+41438507 | None:intergenic |
| CAATCGAAAATCTGGTTGGT+TGG | 0.529763 | 7_4:+41436133 | None:intergenic |
| GAACAATAGGGAATTAGTAA+AGG | 0.532955 | 7_4:+41438541 | None:intergenic |
| GAAGAGGCTGTTACAAAAGA+AGG | 0.533769 | 7_4:-41438421 | Msa1154080:intron |
| GGTGATATTGATAATAATGA+TGG | 0.535663 | 7_4:-41438611 | Msa1154080:CDS |
| TTTGAACTCGATGGATAGAA+AGG | 0.540931 | 7_4:-41436175 | Msa1154080:three_prime_UTR |
| ATCTCAATCGAAAATCTGGT+TGG | 0.548129 | 7_4:+41436129 | None:intergenic |
| GAAAATGAAAATCTAGCTCA+TGG | 0.549115 | 7_4:-41438713 | Msa1154080:CDS |
| ATTGCGTAACAAGGTTATGT+TGG | 0.551540 | 7_4:-41436243 | Msa1154080:three_prime_UTR |
| AACAATAACCCTACTTCTGA+GGG | 0.553155 | 7_4:-41438515 | Msa1154080:CDS |
| GAACAATAACCCTACTTCTG+AGG | 0.557215 | 7_4:-41438516 | Msa1154080:CDS |
| GCCTCTTCGTTCCTTAACAA+TGG | 0.560157 | 7_4:+41438436 | None:intergenic |
| TTGTGCATCATTGCGTAACA+AGG | 0.560318 | 7_4:-41436252 | Msa1154080:three_prime_UTR |
| CAATAGGGAATTAGTAAAGG+TGG | 0.561256 | 7_4:+41438544 | None:intergenic |
| TGCACTCACAAACATGATCA+AGG | 0.563442 | 7_4:-41436737 | Msa1154080:CDS |
| TGATATTTGCATCAATAACA+TGG | 0.571810 | 7_4:-41436087 | Msa1154080:three_prime_UTR |
| TGCTTTGCAGAAACTACTAC+AGG | 0.577466 | 7_4:-41436760 | Msa1154080:intron |
| AAGAAACACGGAAGAGTGAT+CGG | 0.578189 | 7_4:+41436592 | None:intergenic |
| TAGGTTGTCTTGTGAAGAGG+TGG | 0.580386 | 7_4:+41436674 | None:intergenic |
| GAAGGAGTCTGAGCTGCCTG+AGG | 0.592747 | 7_4:-41437634 | Msa1154080:CDS |
| AATTGTGGAAGATGTAACTC+GGG | 0.595186 | 7_4:-41436057 | Msa1154080:three_prime_UTR |
| AATTTCACAAACATGGGAGA+AGG | 0.598123 | 7_4:-41437652 | Msa1154080:CDS |
| GAATAGGTTGTCTTGTGAAG+AGG | 0.606524 | 7_4:+41436671 | None:intergenic |
| TTCAAACCTGAAACCTTACA+TGG | 0.607521 | 7_4:+41436192 | None:intergenic |
| TCAAAAGTGAGTCCAGAGAG+TGG | 0.622190 | 7_4:+41436479 | None:intergenic |
| AAATTGTGGAAGATGTAACT+CGG | 0.627580 | 7_4:-41436058 | Msa1154080:three_prime_UTR |
| TATCAGAAATATGGACACCT+AGG | 0.634267 | 7_4:+41436405 | None:intergenic |
| TCCATTGTTAAGGAACGAAG+AGG | 0.645691 | 7_4:-41438437 | Msa1154080:CDS |
| TGTGGAAGATGTAACTCGGG+AGG | 0.654137 | 7_4:-41436054 | Msa1154080:three_prime_UTR |
| AACACGGAAGAGTGATCGGT+AGG | 0.657967 | 7_4:+41436596 | None:intergenic |
| AACACACTCTAAGAAAACAA+AGG | 0.662230 | 7_4:+41436308 | None:intergenic |
| CTTGATTCTCATGATCACCT+AGG | 0.662285 | 7_4:-41436422 | Msa1154080:CDS |
| AGCTCTTATAATATATGTAG+GGG | 0.664095 | 7_4:+41438833 | None:intergenic |
| CTGAGGAAGATGGTCATCAG+TGG | 0.677795 | 7_4:-41437617 | Msa1154080:CDS |
| GTTGTCAAAACTAAGAAACA+CGG | 0.709857 | 7_4:+41436580 | None:intergenic |
| AATGAAAATCTAGCTCATGG+TGG | 0.721998 | 7_4:-41438710 | Msa1154080:CDS |
| GCAAAACCCTGAAATCATGG+TGG | 0.724951 | 7_4:-41436624 | Msa1154080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTATTATTATTATTATTT+TGG | - | chr7_4:41436784-41436803 | Msa1154080:intron | 0.0% |
| !! | TCTTAAAAAAAAAAAAAAGA+AGG | + | chr7_4:41436597-41436616 | None:intergenic | 10.0% |
| !!! | ATAATAACAAAAGTATTAAT+TGG | + | chr7_4:41436746-41436765 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTGTTACAAT+TGG | - | chr7_4:41437040-41437059 | Msa1154080:intron | 10.0% |
| !!! | AACTAAATCTTATTTATTAA+AGG | + | chr7_4:41437521-41437540 | None:intergenic | 10.0% |
| !!! | CAAAATATATTTTACATAAT+TGG | + | chr7_4:41438757-41438776 | None:intergenic | 10.0% |
| !!! | TAGAAATCTTAGAAAAATTT+TGG | + | chr7_4:41436002-41436021 | None:intergenic | 15.0% |
| !! | ATACCAAAAAGAAAAAAAAA+TGG | - | chr7_4:41436021-41436040 | Msa1154080:three_prime_UTR | 15.0% |
| !!! | TTTCCATTTTTTTTTCTTTT+TGG | + | chr7_4:41436027-41436046 | None:intergenic | 15.0% |
| !!! | TTTACTATATAGTTTTGTTT+AGG | - | chr7_4:41436555-41436574 | Msa1154080:CDS | 15.0% |
| !! | GTTAGTTAATTTATTGAATT+AGG | + | chr7_4:41437303-41437322 | None:intergenic | 15.0% |
| !! | AAAATTCAGGTATTAATTTA+AGG | - | chr7_4:41437576-41437595 | Msa1154080:CDS | 15.0% |
| !!! | TGTTTTGAAAATTAATTAAC+CGG | + | chr7_4:41437690-41437709 | None:intergenic | 15.0% |
| !!! | TGTTTTGAAAATTAATTAAC+CGG | + | chr7_4:41437690-41437709 | None:intergenic | 15.0% |
| !!! | ATAAACAAATTTTAAGAAAG+AGG | + | chr7_4:41438403-41438422 | None:intergenic | 15.0% |
| !!! | TTTGTGTATATTTTTGACAT+AGG | - | chr7_4:41435951-41435970 | Msa1154080:three_prime_UTR | 20.0% |
| !!! | CATTAAGAATATTTCTAAGT+TGG | + | chr7_4:41436120-41436139 | None:intergenic | 20.0% |
| !! | AGAAATATTCTTAATGAAAG+TGG | - | chr7_4:41436124-41436143 | Msa1154080:three_prime_UTR | 20.0% |
| !! | AAAAGAAGTCAATTCTTAAA+TGG | + | chr7_4:41436439-41436458 | None:intergenic | 20.0% |
| !! | AATGTGGATATAGATATAAT+GGG | + | chr7_4:41436511-41436530 | None:intergenic | 20.0% |
| !! | AAATGTGGATATAGATATAA+TGG | + | chr7_4:41436512-41436531 | None:intergenic | 20.0% |
| !! | TACATTAGTCAATAAATAAG+AGG | + | chr7_4:41436651-41436670 | None:intergenic | 20.0% |
| !!! | TTCACTTATATTTGAACTTT+TGG | - | chr7_4:41436673-41436692 | Msa1154080:CDS | 20.0% |
| !!! | CTTTTACATATGAGTAATAT+TGG | - | chr7_4:41436832-41436851 | Msa1154080:intron | 20.0% |
| !! | AAGGACTATGTTATATAATT+AGG | - | chr7_4:41436884-41436903 | Msa1154080:intron | 20.0% |
| !!! | TTTCTAAAGTTTGTTAGTTA+TGG | - | chr7_4:41436932-41436951 | Msa1154080:intron | 20.0% |
| !! | ATAAATATACCTTGGAAAAT+CGG | + | chr7_4:41437196-41437215 | None:intergenic | 20.0% |
| !!! | TAATTTTCAAAACAATTGTC+CGG | - | chr7_4:41437696-41437715 | Msa1154080:intron | 20.0% |
| !! | TAACATGGTTAAAAAAATTG+TGG | - | chr7_4:41438684-41438703 | Msa1154080:CDS | 20.0% |
| !! | TAAGTATCATTCATTGAAAA+TGG | + | chr7_4:41438787-41438806 | None:intergenic | 20.0% |
| !! | CTTATCAACAAATTAAGAAA+AGG | - | chr7_4:41438831-41438850 | Msa1154080:five_prime_UTR | 20.0% |
| ! | AGCTCTTATAATATATGTAG+GGG | + | chr7_4:41435926-41435945 | None:intergenic | 25.0% |
| ! | GAGCTCTTATAATATATGTA+GGG | + | chr7_4:41435927-41435946 | None:intergenic | 25.0% |
| ! | TGAGCTCTTATAATATATGT+AGG | + | chr7_4:41435928-41435947 | None:intergenic | 25.0% |
| !! | GGTGATATTGATAATAATGA+TGG | - | chr7_4:41436145-41436164 | Msa1154080:three_prime_UTR | 25.0% |
| ! | GTTATTGTTCAAGAACAATA+GGG | + | chr7_4:41436230-41436249 | None:intergenic | 25.0% |
| ! | AAATTGTAGATGTAGAAATG+TGG | + | chr7_4:41436527-41436546 | None:intergenic | 25.0% |
| !! | TATATTTGAACTTTTGGATG+AGG | - | chr7_4:41436679-41436698 | Msa1154080:CDS | 25.0% |
| ! | GACAAACAATAACAAAAGTA+TGG | + | chr7_4:41436813-41436832 | None:intergenic | 25.0% |
| ! | ATGATGAACAATAATTGATG+GGG | + | chr7_4:41436859-41436878 | None:intergenic | 25.0% |
| ! | GATGATGAACAATAATTGAT+GGG | + | chr7_4:41436860-41436879 | None:intergenic | 25.0% |
| !! | TGATGATGAACAATAATTGA+TGG | + | chr7_4:41436861-41436880 | None:intergenic | 25.0% |
| ! | TTATTGTTCATCATCATTGA+AGG | - | chr7_4:41436865-41436884 | Msa1154080:intron | 25.0% |
| ! | AAACGAGCAAATTAATAAAG+AGG | + | chr7_4:41436915-41436934 | None:intergenic | 25.0% |
| !! | TATATGCAATTCTTGTTTAC+AGG | - | chr7_4:41437079-41437098 | Msa1154080:intron | 25.0% |
| ! | AATTGAATGACCTTGTAAAA+AGG | + | chr7_4:41437642-41437661 | None:intergenic | 25.0% |
| ! | TATTTATTAGCTAGCATCTT+AGG | - | chr7_4:41437819-41437838 | Msa1154080:intron | 25.0% |
| ! | ATTTATTAGCTAGCATCTTA+GGG | - | chr7_4:41437820-41437839 | Msa1154080:intron | 25.0% |
| !! | TATTGATTAGTAAGAAGTAG+AGG | + | chr7_4:41437952-41437971 | None:intergenic | 25.0% |
| ! | CATACATGATATCAGAAATA+TGG | + | chr7_4:41438363-41438382 | None:intergenic | 25.0% |
| ! | TGATATTTGCATCAATAACA+TGG | - | chr7_4:41438669-41438688 | Msa1154080:CDS | 25.0% |
| ! | GAAAATGAAAATCTAGCTCA+TGG | - | chr7_4:41436043-41436062 | Msa1154080:three_prime_UTR | 30.0% |
| !! | ATAGTTGATGAGTTGTTAAG+AGG | - | chr7_4:41436079-41436098 | Msa1154080:three_prime_UTR | 30.0% |
| TTCAAAAGATCTTCAGCAAA+TGG | + | chr7_4:41436181-41436200 | None:intergenic | 30.0% | |
| !! | ATTTGCTGAAGATCTTTTGA+AGG | - | chr7_4:41436180-41436199 | Msa1154080:three_prime_UTR | 30.0% |
| GAACAATAGGGAATTAGTAA+AGG | + | chr7_4:41436218-41436237 | None:intergenic | 30.0% | |
| GGTTATTGTTCAAGAACAAT+AGG | + | chr7_4:41436231-41436250 | None:intergenic | 30.0% | |
| !!! | TTTTTTCAAACACACTGCTT+AGG | - | chr7_4:41436467-41436486 | Msa1154080:CDS | 30.0% |
| !! | TTTTTCAAACACACTGCTTA+GGG | - | chr7_4:41436468-41436487 | Msa1154080:CDS | 30.0% |
| CACACACATATATCATTTCT+TGG | - | chr7_4:41437012-41437031 | Msa1154080:intron | 30.0% | |
| ACAGGAAAATTTCACAAACA+TGG | - | chr7_4:41437097-41437116 | Msa1154080:intron | 30.0% | |
| CAGGAAAATTTCACAAACAT+GGG | - | chr7_4:41437098-41437117 | Msa1154080:intron | 30.0% | |
| TGTGTCGTATAAATATACCT+TGG | + | chr7_4:41437204-41437223 | None:intergenic | 30.0% | |
| TAGAAACTCCCTTGTAAAAA+AGG | + | chr7_4:41437240-41437259 | None:intergenic | 30.0% | |
| ! | CTAGAAATGACCTTTTTACA+AGG | - | chr7_4:41437629-41437648 | Msa1154080:CDS | 30.0% |
| CACTATTTGTACAAATTGTC+CGG | - | chr7_4:41437668-41437687 | Msa1154080:intron | 30.0% | |
| TTAACTGTTGAGATTTGACT+TGG | - | chr7_4:41437755-41437774 | Msa1154080:intron | 30.0% | |
| GTTGTCAAAACTAAGAAACA+CGG | + | chr7_4:41438179-41438198 | None:intergenic | 30.0% | |
| ! | TGTATGATGATGTCCTTAAT+TGG | - | chr7_4:41438377-41438396 | Msa1154080:intron | 30.0% |
| TTTAAGAAAGAGGCCAATTA+AGG | + | chr7_4:41438393-41438412 | None:intergenic | 30.0% | |
| ! | AACACACTCTAAGAAAACAA+AGG | + | chr7_4:41438451-41438470 | None:intergenic | 30.0% |
| ACTAATCTCAATCGAAAATC+TGG | + | chr7_4:41438634-41438653 | None:intergenic | 30.0% | |
| AAATTGTGGAAGATGTAACT+CGG | - | chr7_4:41438698-41438717 | Msa1154080:CDS | 30.0% | |
| ! | AATGAAAATCTAGCTCATGG+TGG | - | chr7_4:41436046-41436065 | Msa1154080:three_prime_UTR | 35.0% |
| !! | TAAGTTGGTTTGCAAGTTGA+TGG | + | chr7_4:41436105-41436124 | None:intergenic | 35.0% |
| CAATAGGGAATTAGTAAAGG+TGG | + | chr7_4:41436215-41436234 | None:intergenic | 35.0% | |
| AACAATAACCCTACTTCTGA+GGG | - | chr7_4:41436241-41436260 | Msa1154080:three_prime_UTR | 35.0% | |
| TTCCAAAGAGTCTTCAGATT+TGG | + | chr7_4:41436284-41436303 | None:intergenic | 35.0% | |
| TTGCAAGAGTTCCATTGTTA+AGG | - | chr7_4:41436309-41436328 | Msa1154080:three_prime_UTR | 35.0% | |
| TTGTTAGTTATGGTTTGAGC+TGG | - | chr7_4:41436942-41436961 | Msa1154080:intron | 35.0% | |
| AATTTCACAAACATGGGAGA+AGG | - | chr7_4:41437104-41437123 | Msa1154080:intron | 35.0% | |
| !!! | CGGTGTGCAAAATCTTTTTT+TGG | + | chr7_4:41437176-41437195 | None:intergenic | 35.0% |
| CCTTGTAAAAAAGGTTTGTG+CGG | + | chr7_4:41437231-41437250 | None:intergenic | 35.0% | |
| !!! | CGCACAAACCTTTTTTACAA+GGG | - | chr7_4:41437229-41437248 | Msa1154080:intron | 35.0% |
| TAACCTTTGACCTAAATCAC+TGG | + | chr7_4:41437856-41437875 | None:intergenic | 35.0% | |
| TGAACTGAAAGAGTTTCTGA+TGG | - | chr7_4:41437878-41437897 | Msa1154080:intron | 35.0% | |
| GTGGATCTTCTTGAATTCTT+TGG | + | chr7_4:41438066-41438085 | None:intergenic | 35.0% | |
| GCAAGATTCTACAAGTATGA+TGG | + | chr7_4:41438114-41438133 | None:intergenic | 35.0% | |
| GATAATCCACCATGATTTCA+GGG | + | chr7_4:41438141-41438160 | None:intergenic | 35.0% | |
| ! | TCCTTTTCTCTCAGTGAAAA+AGG | - | chr7_4:41438228-41438247 | Msa1154080:intron | 35.0% |
| !! | TCCTTTTTCACTGAGAGAAA+AGG | + | chr7_4:41438232-41438251 | None:intergenic | 35.0% |
| ! | TTTTCTCTCAGTGAAAAAGG+AGG | - | chr7_4:41438231-41438250 | Msa1154080:intron | 35.0% |
| !! | CACTTTTGATGATCCAGAAA+AGG | - | chr7_4:41438291-41438310 | Msa1154080:intron | 35.0% |
| TATCAGAAATATGGACACCT+AGG | + | chr7_4:41438354-41438373 | None:intergenic | 35.0% | |
| ATTGCGTAACAAGGTTATGT+TGG | - | chr7_4:41438513-41438532 | Msa1154080:CDS | 35.0% | |
| TGGTGAATACAAGCATAGTT+TGG | + | chr7_4:41438547-41438566 | None:intergenic | 35.0% | |
| ATGCTTGTATTCACCATGTA+AGG | - | chr7_4:41438551-41438570 | Msa1154080:CDS | 35.0% | |
| TATTCACCATGTAAGGTTTC+AGG | - | chr7_4:41438558-41438577 | Msa1154080:CDS | 35.0% | |
| TTCAAACCTGAAACCTTACA+TGG | + | chr7_4:41438567-41438586 | None:intergenic | 35.0% | |
| TTTGAACTCGATGGATAGAA+AGG | - | chr7_4:41438581-41438600 | Msa1154080:CDS | 35.0% | |
| ATCTCAATCGAAAATCTGGT+TGG | + | chr7_4:41438630-41438649 | None:intergenic | 35.0% | |
| AATTGTGGAAGATGTAACTC+GGG | - | chr7_4:41438699-41438718 | Msa1154080:CDS | 35.0% | |
| GAACAATAACCCTACTTCTG+AGG | - | chr7_4:41436240-41436259 | Msa1154080:three_prime_UTR | 40.0% | |
| CACCAAATCTGAAGACTCTT+TGG | - | chr7_4:41436279-41436298 | Msa1154080:three_prime_UTR | 40.0% | |
| TCCATTGTTAAGGAACGAAG+AGG | - | chr7_4:41436319-41436338 | Msa1154080:three_prime_UTR | 40.0% | |
| GAAGAGGCTGTTACAAAAGA+AGG | - | chr7_4:41436335-41436354 | Msa1154080:three_prime_UTR | 40.0% | |
| !!! | TTTTGCACACCGATTTTCCA+AGG | - | chr7_4:41437184-41437203 | Msa1154080:intron | 40.0% |
| !!! | CCGCACAAACCTTTTTTACA+AGG | - | chr7_4:41437228-41437247 | Msa1154080:intron | 40.0% |
| TTGAGTAGGTCCAGTGATTT+AGG | - | chr7_4:41437843-41437862 | Msa1154080:intron | 40.0% | |
| TGCTTTGCAGAAACTACTAC+AGG | - | chr7_4:41437996-41438015 | Msa1154080:intron | 40.0% | |
| TGCACTCACAAACATGATCA+AGG | - | chr7_4:41438019-41438038 | Msa1154080:intron | 40.0% | |
| GAATAGGTTGTCTTGTGAAG+AGG | + | chr7_4:41438088-41438107 | None:intergenic | 40.0% | |
| CTTCACAAGACAACCTATTC+TGG | - | chr7_4:41438088-41438107 | Msa1154080:intron | 40.0% | |
| ACAAGTATGATGGCCAGAAT+AGG | + | chr7_4:41438104-41438123 | None:intergenic | 40.0% | |
| CTTGCAAAACCCTGAAATCA+TGG | - | chr7_4:41438129-41438148 | Msa1154080:intron | 40.0% | |
| GGATAATCCACCATGATTTC+AGG | + | chr7_4:41438142-41438161 | None:intergenic | 40.0% | |
| AAGAAACACGGAAGAGTGAT+CGG | + | chr7_4:41438167-41438186 | None:intergenic | 40.0% | |
| !! | GAGAAAAGGACAGTCTTGTT+TGG | + | chr7_4:41438218-41438237 | None:intergenic | 40.0% |
| GATATTGTTCATCCACTCTC+TGG | - | chr7_4:41438265-41438284 | Msa1154080:intron | 40.0% | |
| ! | GATAGTGTGACATCCTTTTC+TGG | + | chr7_4:41438307-41438326 | None:intergenic | 40.0% |
| CTTGATTCTCATGATCACCT+AGG | - | chr7_4:41438334-41438353 | Msa1154080:intron | 40.0% | |
| TTGTGCATCATTGCGTAACA+AGG | - | chr7_4:41438504-41438523 | Msa1154080:CDS | 40.0% | |
| AGAAAGGTGAGACCCATTAA+AGG | - | chr7_4:41438597-41438616 | Msa1154080:CDS | 40.0% | |
| ! | GTTGGTTGGCTACCTTTAAT+GGG | + | chr7_4:41438612-41438631 | None:intergenic | 40.0% |
| CAATCGAAAATCTGGTTGGT+TGG | + | chr7_4:41438626-41438645 | None:intergenic | 40.0% | |
| CTCGGGAGGTTAGATAAATA+TGG | - | chr7_4:41438716-41438735 | Msa1154080:CDS | 40.0% | |
| AATCAGAGCCCTCAGAAGTA+GGG | + | chr7_4:41436252-41436271 | None:intergenic | 45.0% | |
| AAATCAGAGCCCTCAGAAGT+AGG | + | chr7_4:41436253-41436272 | None:intergenic | 45.0% | |
| GCCTCTTCGTTCCTTAACAA+TGG | + | chr7_4:41436323-41436342 | None:intergenic | 45.0% | |
| GGTCATCAGTGGAGAAAGTA+TGG | - | chr7_4:41437150-41437169 | Msa1154080:intron | 45.0% | |
| CTAGCATCTTAGGGTTGAGT+AGG | - | chr7_4:41437829-41437848 | Msa1154080:intron | 45.0% | |
| GGTCCAGTGATTTAGGTCAA+AGG | - | chr7_4:41437850-41437869 | Msa1154080:intron | 45.0% | |
| TAGGTTGTCTTGTGAAGAGG+TGG | + | chr7_4:41438085-41438104 | None:intergenic | 45.0% | |
| GCAAAACCCTGAAATCATGG+TGG | - | chr7_4:41438132-41438151 | Msa1154080:intron | 45.0% | |
| !! | AGTCTTGTTTGGCTGGTGTT+GGG | + | chr7_4:41438207-41438226 | None:intergenic | 45.0% |
| !! | AAAGGACAGTCTTGTTTGGC+TGG | + | chr7_4:41438214-41438233 | None:intergenic | 45.0% |
| ! | AGTGAAAAAGGAGGAGTGCA+AGG | - | chr7_4:41438240-41438259 | Msa1154080:intron | 45.0% |
| TCAAAAGTGAGTCCAGAGAG+TGG | + | chr7_4:41438280-41438299 | None:intergenic | 45.0% | |
| !! | GGTTTCAGGTTTGAACTCGA+TGG | - | chr7_4:41438572-41438591 | Msa1154080:CDS | 45.0% |
| ! | GGTTGGTTGGCTACCTTTAA+TGG | + | chr7_4:41438613-41438632 | None:intergenic | 45.0% |
| !!! | TTTAAGAAAATATTTTATTT+TGG | - | chr7_4:41436610-41436629 | Msa1154080:CDS | 5.0% |
| !! | AATAATTTAAAAAAAAATTC+AGG | - | chr7_4:41437563-41437582 | Msa1154080:intron | 5.0% |
| ! | AATCTAGCTCATGGTGGTCG+TGG | - | chr7_4:41436052-41436071 | Msa1154080:three_prime_UTR | 50.0% |
| CACTGATGACCATCTTCCTC+AGG | + | chr7_4:41437141-41437160 | None:intergenic | 50.0% | |
| CTGAGGAAGATGGTCATCAG+TGG | - | chr7_4:41437139-41437158 | Msa1154080:intron | 50.0% | |
| AACACGGAAGAGTGATCGGT+AGG | + | chr7_4:41438163-41438182 | None:intergenic | 50.0% | |
| !! | CAGTCTTGTTTGGCTGGTGT+TGG | + | chr7_4:41438208-41438227 | None:intergenic | 50.0% |
| TGTGGAAGATGTAACTCGGG+AGG | - | chr7_4:41438702-41438721 | Msa1154080:CDS | 50.0% | |
| TCTGAGCTGCCTGAGGAAGA+TGG | - | chr7_4:41437129-41437148 | Msa1154080:intron | 55.0% | |
| GAAGGAGTCTGAGCTGCCTG+AGG | - | chr7_4:41437122-41437141 | Msa1154080:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 41435914 | 41438864 | 41435914 | ID=Msa1154080;Name=Msa1154080 |
| chr7_4 | mRNA | 41435914 | 41438864 | 41435914 | ID=Msa1154080-mRNA-1;Parent=Msa1154080;Name=Msa1154080-mRNA-1;_AED=0.26;_eAED=0.26;_QI=126|1|1|1|1|1|3|453|275 |
| chr7_4 | exon | 41435914 | 41436772 | 41435914 | ID=Msa1154080-mRNA-1:exon:10036;Parent=Msa1154080-mRNA-1 |
| chr7_4 | exon | 41437573 | 41437677 | 41437573 | ID=Msa1154080-mRNA-1:exon:10035;Parent=Msa1154080-mRNA-1 |
| chr7_4 | exon | 41438422 | 41438864 | 41438422 | ID=Msa1154080-mRNA-1:exon:10034;Parent=Msa1154080-mRNA-1 |
| chr7_4 | five_prime_UTR | 41438739 | 41438864 | 41438739 | ID=Msa1154080-mRNA-1:five_prime_utr;Parent=Msa1154080-mRNA-1 |
| chr7_4 | CDS | 41438422 | 41438738 | 41438422 | ID=Msa1154080-mRNA-1:cds;Parent=Msa1154080-mRNA-1 |
| chr7_4 | CDS | 41437573 | 41437677 | 41437573 | ID=Msa1154080-mRNA-1:cds;Parent=Msa1154080-mRNA-1 |
| chr7_4 | CDS | 41436367 | 41436772 | 41436367 | ID=Msa1154080-mRNA-1:cds;Parent=Msa1154080-mRNA-1 |
| chr7_4 | three_prime_UTR | 41435914 | 41436366 | 41435914 | ID=Msa1154080-mRNA-1:three_prime_utr;Parent=Msa1154080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
