AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0148720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0148720 MtrunA17_Chr1g0150271 92.969 256 17 1 1 256 1 255 2.63e-180 495
Msa0148720 MtrunA17_Chr1g0150281 46.626 163 74 4 83 239 122 277 1.09e-41 144
Msa0148720 MtrunA17_Chr4g0001361 36.090 266 133 4 6 234 45 310 3.39e-41 143
Msa0148720 MtrunA17_Chr2g0333851 37.931 261 120 7 15 240 62 315 1.13e-40 142
Msa0148720 MtrunA17_Chr3g0136961 41.250 160 83 2 86 234 123 282 2.65e-37 133
Msa0148720 MtrunA17_Chr7g0270831 38.919 185 82 6 6 161 94 276 3.47e-32 122
Msa0148720 MtrunA17_Chr3g0099641 48.421 95 47 1 83 177 235 327 1.22e-26 107
Msa0148720 MtrunA17_Chr4g0051181 44.118 102 52 2 60 161 207 303 1.09e-25 105
Msa0148720 MtrunA17_Chr4g0060271 52.439 82 37 1 80 161 236 315 5.42e-25 103
Msa0148720 MtrunA17_Chr2g0288871 54.795 73 33 0 89 161 293 365 3.36e-24 100
Msa0148720 MtrunA17_Chr4g0075201 59.091 66 27 0 96 161 262 327 5.99e-24 100
Msa0148720 MtrunA17_Chr7g0216891 41.880 117 59 3 45 158 166 276 1.10e-23 99.8
Msa0148720 MtrunA17_Chr2g0302391 50.575 87 40 2 99 185 209 292 3.64e-23 97.4
Msa0148720 MtrunA17_Chr2g0322391 56.061 66 29 0 96 161 344 409 5.57e-23 97.8
Msa0148720 MtrunA17_Chr4g0025051 38.211 123 63 3 39 161 286 395 7.99e-23 97.1
Msa0148720 MtrunA17_Chr4g0025061 53.030 66 31 0 96 161 355 420 2.15e-21 93.2
Msa0148720 MtrunA17_Chr5g0447701 50.000 76 35 2 86 161 239 311 1.10e-19 87.4
Msa0148720 MtrunA17_Chr2g0294231 45.745 94 43 3 100 186 202 294 2.22e-18 83.6
Msa0148720 MtrunA17_Chr5g0432161 50.794 63 30 1 99 161 419 480 4.03e-18 83.6
Msa0148720 MtrunA17_Chr5g0432161 48.333 60 29 2 102 161 245 302 1.51e-12 67.0
Msa0148720 MtrunA17_Chr5g0445311 37.815 119 63 4 51 161 308 423 4.74e-18 83.2
Msa0148720 MtrunA17_Chr3g0101131 41.935 93 48 3 72 161 385 474 6.06e-18 82.8
Msa0148720 MtrunA17_Chr4g0053281 51.613 62 30 0 99 160 264 325 9.75e-18 81.3
Msa0148720 MtrunA17_Chr7g0218081 40.952 105 53 4 74 172 382 483 1.65e-17 81.6
Msa0148720 MtrunA17_Chr7g0218081 48.333 60 29 2 102 161 229 286 2.57e-11 63.2
Msa0148720 MtrunA17_Chr1g0194481 50.769 65 31 1 100 164 157 220 3.09e-17 79.7
Msa0148720 MtrunA17_Chr1g0184691 48.485 66 33 1 99 163 291 356 3.50e-17 80.1
Msa0148720 MtrunA17_Chr2g0289181 46.970 66 35 0 96 161 9 74 3.53e-17 78.2
Msa0148720 MtrunA17_Chr3g0106491 49.206 63 31 1 99 161 363 424 3.91e-17 80.5
Msa0148720 MtrunA17_Chr3g0106491 50.000 60 28 2 102 161 199 256 3.89e-13 68.6
Msa0148720 MtrunA17_Chr5g0401821 50.000 62 31 0 99 160 197 258 9.37e-17 77.8
Msa0148720 MtrunA17_Chr1g0150801 50.000 60 29 1 99 158 100 158 9.87e-17 75.5
Msa0148720 MtrunA17_Chr3g0079691 46.575 73 38 1 89 161 483 554 9.93e-17 79.3
Msa0148720 MtrunA17_Chr3g0079691 41.333 75 35 3 94 161 266 338 6.74e-11 62.0
Msa0148720 MtrunA17_Chr7g0228941 51.667 60 29 0 99 158 50 109 1.05e-16 74.3
Msa0148720 MtrunA17_Chr5g0418191 40.404 99 49 3 71 161 283 379 1.12e-16 79.0
Msa0148720 MtrunA17_Chr5g0418191 35.922 103 58 3 102 204 152 246 5.13e-14 71.2
Msa0148720 MtrunA17_Chr4g0004911 45.205 73 39 1 89 161 324 395 2.15e-16 78.2
Msa0148720 MtrunA17_Chr4g0004911 45.902 61 32 1 101 161 184 243 7.15e-13 67.8
Msa0148720 MtrunA17_Chr4g0042831 42.683 82 43 3 80 161 260 337 2.71e-16 77.4
Msa0148720 MtrunA17_Chr7g0224801 48.387 62 31 1 99 160 91 151 2.88e-16 74.3
Msa0148720 MtrunA17_Chr7g0270191 46.053 76 38 2 100 175 144 216 3.20e-16 76.6
Msa0148720 MtrunA17_Chr7g0243891 45.205 73 39 1 89 161 362 433 4.22e-16 77.4
Msa0148720 MtrunA17_Chr7g0243891 45.946 74 33 3 88 161 208 274 7.70e-12 64.7
Msa0148720 MtrunA17_Chr4g0051881 41.111 90 43 3 100 180 177 265 4.49e-16 76.6
Msa0148720 MtrunA17_Chr5g0443131 48.387 62 31 1 100 161 156 216 6.03e-16 75.9
Msa0148720 MtrunA17_Chr1g0147881 46.774 62 33 0 99 160 260 321 6.40e-16 76.3
Msa0148720 MtrunA17_Chr7g0263531 46.970 66 34 1 96 161 356 420 6.67e-16 76.6
Msa0148720 MtrunA17_Chr7g0263531 48.571 70 34 2 102 171 190 257 4.23e-15 74.3
Msa0148720 MtrunA17_Chr2g0284321 48.333 60 31 0 102 161 36 95 9.81e-16 73.9
Msa0148720 MtrunA17_Chr1g0188941 34.259 108 61 3 54 161 13 110 1.32e-15 70.9
Msa0148720 MtrunA17_Chr7g0249311 47.619 63 32 1 99 161 390 451 1.62e-15 75.9
Msa0148720 MtrunA17_Chr7g0249311 42.500 80 42 3 101 180 179 254 1.43e-11 64.3
Msa0148720 MtrunA17_Chr8g0379461 48.333 60 31 0 102 161 77 136 1.73e-15 73.6
Msa0148720 MtrunA17_Chr7g0249301 46.032 63 33 1 99 161 290 351 3.22e-15 74.3
Msa0148720 MtrunA17_Chr7g0249301 40.741 81 44 3 100 180 61 137 1.70e-12 66.6
Msa0148720 MtrunA17_Chr5g0418781 37.615 109 57 4 100 198 123 230 4.68e-15 73.2
Msa0148720 MtrunA17_Chr3g0129361 44.615 65 35 1 99 163 142 205 4.91e-15 72.0
Msa0148720 MtrunA17_Chr3g0139021 50.000 60 30 0 99 158 312 371 4.91e-15 73.9
Msa0148720 MtrunA17_Chr8g0335811 43.939 66 36 1 99 164 152 216 1.04e-14 71.2
Msa0148720 MtrunA17_Chr8g0383351 43.077 65 36 1 99 163 158 221 1.39e-14 70.9
Msa0148720 MtrunA17_Chr4g0074001 46.032 63 33 1 99 161 357 418 1.47e-14 72.8
Msa0148720 MtrunA17_Chr7g0270051 48.333 60 31 0 102 161 54 113 1.66e-14 71.2
Msa0148720 MtrunA17_Chr4g0071521 47.541 61 32 0 99 159 243 303 2.25e-14 71.6
Msa0148720 MtrunA17_Chr2g0319961 45.455 66 36 0 96 161 75 140 2.28e-14 70.9
Msa0148720 MtrunA17_Chr7g0248721 51.667 60 27 2 99 158 139 196 4.50e-14 69.3
Msa0148720 MtrunA17_Chr4g0024391 42.424 66 38 0 96 161 224 289 4.51e-14 71.2
Msa0148720 MtrunA17_Chr4g0068541 40.506 79 44 2 83 161 192 267 6.31e-14 70.9
Msa0148720 MtrunA17_Chr2g0293481 43.939 66 37 0 98 163 264 329 8.24e-14 70.5
Msa0148720 MtrunA17_Chr7g0238921 50.877 57 27 1 102 158 125 180 1.37e-13 69.3
Msa0148720 MtrunA17_Chr8g0348311 45.902 61 33 0 102 162 156 216 1.80e-13 68.9
Msa0148720 MtrunA17_Chr7g0248691 28.571 161 88 4 45 195 115 258 2.02e-13 68.9
Msa0148720 MtrunA17_Chr8g0386241 42.029 69 37 2 99 165 101 168 2.51e-13 66.6
Msa0148720 MtrunA17_Chr8g0383251 42.857 63 35 1 99 161 106 167 3.12e-13 66.2
Msa0148720 MtrunA17_Chr8g0387501 42.169 83 43 1 102 184 130 207 3.33e-13 67.8
Msa0148720 MtrunA17_Chr3g0129321 43.284 67 37 1 99 165 116 181 4.44e-13 66.2
Msa0148720 MtrunA17_Chr6g0485431 34.737 95 58 3 68 161 123 214 5.48e-13 67.8
Msa0148720 MtrunA17_Chr5g0432071 42.857 70 38 2 102 171 105 172 9.96e-13 65.5
Msa0148720 MtrunA17_Chr1g0202461 43.333 60 34 0 102 161 262 321 4.79e-12 65.1
Msa0148720 MtrunA17_Chr1g0189391 35.870 92 55 3 69 159 67 155 3.08e-11 62.4
Msa0148720 MtrunA17_Chr3g0126391 33.333 105 66 2 100 200 132 236 4.11e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0148720 AT1G80840.1 36.691 278 140 4 1 242 22 299 4.90e-46 156
Msa0148720 AT4G31800.2 45.714 175 79 3 66 240 84 242 4.35e-42 144
Msa0148720 AT4G31800.1 49.351 154 70 2 87 240 162 307 1.17e-41 145
Msa0148720 AT2G25000.1 36.923 260 115 8 6 244 39 270 8.24e-38 134
Msa0148720 AT2G25000.2 36.614 254 112 8 12 244 2 227 2.24e-37 131
Msa0148720 AT2G25000.4 36.614 254 112 8 12 244 2 227 2.24e-37 131
Msa0148720 AT2G25000.3 37.008 254 111 8 12 244 24 249 5.50e-37 131
Msa0148720 AT4G04450.2 47.191 89 47 0 89 177 186 274 7.68e-26 105
Msa0148720 AT4G04450.1 47.191 89 47 0 89 177 280 368 1.72e-25 105
Msa0148720 AT1G68150.1 41.228 114 65 1 48 161 184 295 1.78e-25 103
Msa0148720 AT4G22070.4 56.164 73 32 0 89 161 285 357 4.53e-25 103
Msa0148720 AT4G22070.3 56.164 73 32 0 89 161 285 357 4.53e-25 103
Msa0148720 AT4G22070.2 56.164 73 32 0 89 161 285 357 4.53e-25 103
Msa0148720 AT4G22070.1 56.164 73 32 0 89 161 285 357 4.53e-25 103
Msa0148720 AT1G62300.1 56.164 73 32 0 89 161 300 372 5.44e-25 103
Msa0148720 AT5G15130.2 58.065 62 26 0 100 161 184 245 3.56e-23 98.2
Msa0148720 AT5G15130.1 58.065 62 26 0 100 161 226 287 3.59e-23 98.6
Msa0148720 AT1G18860.1 53.165 79 35 1 83 161 223 299 4.05e-23 98.2
Msa0148720 AT4G01720.1 30.769 208 92 5 6 161 92 299 5.14e-23 97.8
Msa0148720 AT4G31800.3 75.000 52 13 0 87 138 162 213 5.95e-23 94.4
Msa0148720 AT1G69810.2 33.533 167 105 4 7 171 54 216 1.47e-22 94.7
Msa0148720 AT1G69810.1 33.533 167 105 4 7 171 112 274 2.16e-22 95.1
Msa0148720 AT2G04880.2 32.468 154 83 5 99 242 281 423 4.62e-19 86.3
Msa0148720 AT2G04880.2 42.857 63 34 2 99 161 109 169 2.24e-11 63.9
Msa0148720 AT2G04880.1 32.468 154 83 5 99 242 305 447 5.71e-19 86.3
Msa0148720 AT2G04880.1 42.857 63 34 2 99 161 109 169 2.44e-11 63.5
Msa0148720 AT3G04670.1 39.623 106 59 1 53 158 219 319 1.58e-18 84.0
Msa0148720 AT5G28650.1 37.168 113 66 1 46 158 212 319 6.15e-18 82.0
Msa0148720 AT2G38470.1 41.176 85 40 2 99 183 360 434 1.39e-17 82.0
Msa0148720 AT2G38470.1 40.506 79 37 3 91 161 166 242 7.52e-13 68.2
Msa0148720 AT5G56270.1 50.794 63 30 1 99 161 485 546 1.76e-17 82.0
Msa0148720 AT4G26640.5 41.667 96 50 2 71 161 170 264 2.37e-17 80.9
Msa0148720 AT4G26640.6 41.667 96 50 2 71 161 170 264 2.37e-17 80.9
Msa0148720 AT4G26640.4 41.667 96 50 2 71 161 170 264 2.37e-17 80.9
Msa0148720 AT4G26640.3 41.667 96 50 2 71 161 170 264 2.37e-17 80.9
Msa0148720 AT1G64000.1 45.205 73 37 2 86 158 101 170 3.05e-17 77.8
Msa0148720 AT4G26640.1 41.667 96 50 2 71 161 274 368 3.73e-17 80.9
Msa0148720 AT4G26640.2 41.667 96 50 2 71 161 346 440 4.10e-17 80.9
Msa0148720 AT4G26640.7 41.667 96 50 2 71 161 306 400 4.15e-17 80.9
Msa0148720 AT5G41570.1 51.667 60 28 1 99 158 96 154 4.75e-17 77.0
Msa0148720 AT2G03340.1 47.143 70 36 1 92 161 406 474 6.56e-17 80.1
Msa0148720 AT2G03340.1 37.736 106 55 5 65 161 205 308 1.13e-14 73.6
Msa0148720 AT1G29860.1 48.387 62 31 1 100 161 135 195 7.61e-17 78.6
Msa0148720 AT5G13080.1 50.000 60 29 1 99 158 65 123 1.26e-16 75.1
Msa0148720 AT2G30590.1 50.000 60 30 0 99 158 311 370 1.35e-16 79.0
Msa0148720 AT1G13960.1 47.619 63 32 1 99 161 407 468 1.60e-16 79.0
Msa0148720 AT1G13960.1 43.210 81 35 4 81 161 218 287 9.36e-13 67.8
Msa0148720 AT1G13960.2 45.714 70 37 1 92 161 247 315 1.61e-16 78.6
Msa0148720 AT1G13960.2 43.210 81 35 4 81 161 65 134 1.07e-12 67.4
Msa0148720 AT2G23320.1 49.153 59 30 0 102 160 241 299 1.62e-16 78.2
Msa0148720 AT3G62340.1 39.796 98 53 2 96 188 113 209 1.74e-16 77.4
Msa0148720 AT3G01080.1 45.714 70 37 1 92 161 297 365 2.20e-16 78.6
Msa0148720 AT3G01080.2 45.714 70 37 1 92 161 335 403 2.41e-16 78.6
Msa0148720 AT4G18170.1 45.161 62 33 1 100 161 171 231 2.92e-16 77.4
Msa0148720 AT2G47260.1 44.578 83 45 1 100 182 173 254 4.16e-16 77.0
Msa0148720 AT2G24570.1 48.333 60 31 0 99 158 241 300 8.39e-16 75.9
Msa0148720 AT2G30250.1 40.698 86 48 2 76 161 305 387 1.01e-15 76.3
Msa0148720 AT2G30250.1 39.130 92 44 3 102 193 167 246 1.00e-11 64.7
Msa0148720 AT4G31550.1 48.333 60 31 0 99 158 244 303 1.11e-15 75.9
Msa0148720 AT4G31550.2 48.333 60 31 0 99 158 243 302 1.12e-15 75.9
Msa0148720 AT4G24240.1 45.161 62 34 0 99 160 279 340 1.20e-15 75.9
Msa0148720 AT3G01970.1 46.377 69 34 2 99 165 63 130 1.24e-15 72.4
Msa0148720 AT5G49520.1 46.774 62 32 1 100 161 220 280 1.42e-15 75.9
Msa0148720 AT5G07100.2 42.029 69 39 1 99 167 139 206 2.20e-15 73.2
Msa0148720 AT5G07100.2 48.571 70 34 2 102 171 25 92 3.90e-13 67.0
Msa0148720 AT5G07100.4 42.029 69 39 1 99 167 139 206 2.20e-15 73.2
Msa0148720 AT5G07100.4 48.571 70 34 2 102 171 25 92 3.90e-13 67.0
Msa0148720 AT5G07100.5 42.029 69 39 1 99 167 139 206 2.20e-15 73.2
Msa0148720 AT5G07100.5 48.571 70 34 2 102 171 25 92 3.90e-13 67.0
Msa0148720 AT5G07100.3 42.029 69 39 1 99 167 139 206 2.20e-15 73.2
Msa0148720 AT5G07100.3 48.571 70 34 2 102 171 25 92 3.90e-13 67.0
Msa0148720 AT5G26170.1 43.750 64 35 1 99 162 111 173 2.20e-15 72.4
Msa0148720 AT2G46130.1 39.560 91 46 3 68 158 5 86 2.95e-15 70.1
Msa0148720 AT5G07100.1 44.444 63 34 1 99 161 232 293 3.77e-15 73.9
Msa0148720 AT5G07100.1 48.571 70 34 2 102 171 118 185 1.07e-12 67.0
Msa0148720 AT5G46350.1 43.548 62 34 1 100 161 182 242 3.81e-15 74.3
Msa0148720 AT2G37260.3 47.059 68 35 1 91 158 259 325 3.86e-15 74.3
Msa0148720 AT2G37260.3 47.541 61 30 2 102 162 86 144 1.61e-12 66.6
Msa0148720 AT2G37260.1 47.059 68 35 1 91 158 339 405 3.99e-15 74.7
Msa0148720 AT2G37260.1 47.541 61 30 2 102 162 166 224 1.54e-12 67.0
Msa0148720 AT2G37260.2 47.059 68 35 1 91 158 257 323 4.00e-15 74.3
Msa0148720 AT2G37260.2 47.541 61 30 2 102 162 84 142 1.72e-12 66.6
Msa0148720 AT2G44745.1 43.478 69 38 1 99 167 143 210 4.80e-15 72.4
Msa0148720 AT4G30935.1 44.595 74 38 2 99 170 329 401 5.20e-15 74.7
Msa0148720 AT1G55600.1 51.667 60 28 1 102 161 308 366 6.83e-15 74.3
Msa0148720 AT1G29280.1 46.667 60 32 0 102 161 75 134 7.83e-15 72.4
Msa0148720 AT1G69310.4 46.154 65 31 2 100 161 146 209 1.12e-14 72.4
Msa0148720 AT1G69310.2 46.154 65 31 2 100 161 146 209 1.12e-14 72.4
Msa0148720 AT1G69310.1 46.154 65 31 2 100 161 146 209 1.12e-14 72.4
Msa0148720 AT2G21900.1 40.260 77 45 1 85 161 93 168 1.77e-14 70.5
Msa0148720 AT4G26440.1 44.872 78 40 2 99 176 370 444 3.62e-14 72.0
Msa0148720 AT4G26440.1 33.628 113 64 4 102 209 179 285 5.75e-11 62.8
Msa0148720 AT4G39410.1 43.077 65 36 1 99 163 221 284 7.55e-14 70.5
Msa0148720 AT3G58710.2 37.634 93 58 0 72 164 41 133 8.38e-14 69.7
Msa0148720 AT3G58710.1 47.619 63 33 0 102 164 72 134 9.52e-14 69.7
Msa0148720 AT2G34830.1 43.939 66 37 0 98 163 212 277 1.38e-13 70.1
Msa0148720 AT2G34830.2 43.939 66 37 0 98 163 221 286 1.50e-13 70.1
Msa0148720 AT5G43290.1 43.077 65 36 1 94 158 107 170 2.69e-13 68.6
Msa0148720 AT1G30650.1 45.312 64 35 0 98 161 214 277 3.16e-13 69.3
Msa0148720 AT5G64810.1 41.667 60 34 1 99 158 108 166 4.32e-13 66.6
Msa0148720 AT4G01250.1 41.176 85 49 1 102 185 129 213 6.94e-13 67.4
Msa0148720 AT4G23550.1 41.270 63 37 0 99 161 138 200 4.29e-12 65.5
Msa0148720 AT5G52830.1 46.667 60 32 0 102 161 166 225 4.38e-12 65.5
Msa0148720 AT5G45050.1 45.000 60 33 0 102 161 1181 1240 7.76e-12 65.5
Msa0148720 AT5G45050.4 45.000 60 33 0 102 161 1042 1101 8.00e-12 65.5
Msa0148720 AT5G45050.2 45.000 60 33 0 102 161 1153 1212 8.10e-12 65.5
Msa0148720 AT2G46400.1 37.000 100 56 3 85 182 90 184 3.54e-11 62.4
Msa0148720 AT4G12020.6 31.731 104 69 2 92 195 459 560 4.28e-11 63.5
Msa0148720 AT4G12020.8 31.731 104 69 2 92 195 459 560 4.28e-11 63.5
Msa0148720 AT4G12020.7 31.731 104 69 2 92 195 459 560 4.79e-11 63.2
Msa0148720 AT4G12020.10 31.731 104 69 2 92 195 459 560 4.94e-11 63.2
Msa0148720 AT4G12020.1 31.731 104 69 2 92 195 459 560 4.97e-11 63.2
Msa0148720 AT4G12020.9 31.731 104 69 2 92 195 459 560 4.97e-11 63.2
Msa0148720 AT4G12020.5 31.731 104 69 2 92 195 392 493 4.97e-11 63.2
Msa0148720 AT4G12020.3 31.731 104 69 2 92 195 459 560 5.04e-11 63.2
Msa0148720 AT4G12020.2 31.731 104 69 2 92 195 459 560 5.04e-11 63.2
Msa0148720 AT4G12020.4 31.731 104 69 2 92 195 459 560 5.33e-11 63.2
Msa0148720 AT4G12020.11 31.731 104 69 2 92 195 459 560 5.67e-11 62.8

Find 51 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCTTTACACTTGTATTT+TGG 0.191740 1_4:-9122352 None:intergenic
ATAAGCACTTGGAGACTATT+TGG 0.219634 1_4:+9122503 Msa0148720:three_prime_UTR
GAAAATTTACTTGCGACGTT+TGG 0.274537 1_4:+9122452 Msa0148720:three_prime_UTR
CATACCAAACTTTCATCATT+AGG 0.285634 1_4:-9121489 None:intergenic
TTAGAGATTGATGAACCTTT+AGG 0.306541 1_4:-9122065 None:intergenic
CTTCTCCTAGAGCTTACTTT+AGG 0.314347 1_4:+9121759 Msa0148720:CDS
TGAAGTCAGGATCTTTGATT+AGG 0.319072 1_4:-9122205 None:intergenic
AAATCTCGATTTGAATCTTT+CGG 0.326816 1_4:+9122292 Msa0148720:CDS
ATAAGTTCAAATCATCGAAT+TGG 0.329345 1_4:+9121378 Msa0148720:CDS
CGAAGAGATAAACTCAAATA+AGG 0.329775 1_4:-9122479 None:intergenic
CTCACAAAGTCTAGTATTTG+TGG 0.333230 1_4:-9122123 None:intergenic
TCAACCTAATGATGAAAGTT+TGG 0.350703 1_4:+9121485 Msa0148720:CDS
AAAATTTACTTGCGACGTTT+GGG 0.366133 1_4:+9122453 Msa0148720:three_prime_UTR
GGCTATCAATGGAGGAAGTA+TGG 0.366288 1_4:+9121713 Msa0148720:CDS
TCTAGGAGAAGCATTGTCTT+TGG 0.371896 1_4:-9121747 None:intergenic
TCTTCAAATGGCTATTAGAA+TGG 0.376148 1_4:+9121008 None:intergenic
GGAGTGAAATGAAGGTTTCT+TGG 0.384704 1_4:+9122316 Msa0148720:exon
TCTTTGTCATTCAATGTTGT+TGG 0.386703 1_4:-9122098 None:intergenic
TAAGCACTTGGAGACTATTT+GGG 0.390860 1_4:+9122504 Msa0148720:three_prime_UTR
ACTTAGATAGTATCAAAATA+TGG 0.392382 1_4:+9122385 Msa0148720:three_prime_UTR
GATGGTTTGAATGACTCATT+AGG 0.404082 1_4:-9122032 None:intergenic
TCATCTTCAAGAAATCAAAA+AGG 0.410845 1_4:+9121338 Msa0148720:CDS
CTTTCGGAGGAGTGAAATGA+AGG 0.425821 1_4:+9122308 Msa0148720:exon
GGCTATTAGAATGGATGATA+AGG 0.430275 1_4:+9121017 Msa0148720:CDS
GAAGTCAGGATCTTTGATTA+GGG 0.432423 1_4:-9122204 None:intergenic
TAAGTTCAAATCATCGAATT+GGG 0.451030 1_4:+9121379 Msa0148720:CDS
ATCCTTGTTGCAACATATGA+TGG 0.459740 1_4:+9121990 Msa0148720:CDS
GCTAATGCTGCAGTGAAGTC+AGG 0.465446 1_4:-9122218 None:intergenic
ATGGAGGAAGTATGGTCAAA+AGG 0.476669 1_4:+9121721 Msa0148720:CDS
CCATCTTCATCCACACCTAA+AGG 0.490427 1_4:+9122050 Msa0148720:CDS
AATATATAGATAATAAAAGA+TGG 0.494453 1_4:+9121692 Msa0148720:intron
TGCGGGGCAACTAGGAGCCA+TGG 0.508480 1_4:-9121786 None:intergenic
AGCTTACTTTAGGTGCTCCA+TGG 0.512350 1_4:+9121769 Msa0148720:CDS
GAGAATGTCATGCAACAGTT+TGG 0.514761 1_4:+9122143 Msa0148720:CDS
CTTATGTTCTTGATCAGTGA+CGG 0.524464 1_4:-9122258 None:intergenic
GTCATGCAACAGTTTGGCTA+TGG 0.529941 1_4:+9122149 Msa0148720:CDS
TAATAAAAGATGGCTATCAA+TGG 0.531094 1_4:+9121702 Msa0148720:CDS
CCTTTAGGTGTGGATGAAGA+TGG 0.531585 1_4:-9122050 None:intergenic
TATCTCTTCGTATAAGCACT+TGG 0.534417 1_4:+9122492 Msa0148720:three_prime_UTR
GAGCACCTAAAGTAAGCTCT+AGG 0.566462 1_4:-9121764 None:intergenic
GTTCGTACAAAGACTTGTAG+TGG 0.571338 1_4:-9121462 None:intergenic
TGCAACAGTTTGGCTATGGA+AGG 0.583957 1_4:+9122153 Msa0148720:CDS
CTCCATCATATGTTGCAACA+AGG 0.587646 1_4:-9121992 None:intergenic
AGAGTTACAACAAGTGAGAG+AGG 0.590536 1_4:+9121254 Msa0148720:CDS
TCTCGATTTGAATCTTTCGG+AGG 0.620338 1_4:+9122295 Msa0148720:CDS
TAAAAGATGGCTATCAATGG+AGG 0.624488 1_4:+9121705 Msa0148720:CDS
GATTGATGAACCTTTAGGTG+TGG 0.626271 1_4:-9122060 None:intergenic
AGTTCAGTGATATCACCGAA+AGG 0.630096 1_4:+9122426 Msa0148720:three_prime_UTR
TATGATGGAGAGCACAACCA+TGG 0.692151 1_4:+9122005 Msa0148720:CDS
ATGACTCATTAGGAACACCA+TGG 0.708357 1_4:-9122022 None:intergenic
GATCAAGAACATAAGCGACA+AGG 0.725331 1_4:+9122266 Msa0148720:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATAGATAATAAAAGA+TGG + chr1_4:9121692-9121711 Msa0148720:intron 10.0%
!! AATATATAGATAATAAAAGA+TGG + chr1_4:9121692-9121711 Msa0148720:intron 10.0%
!!! ATCTTTTAATTTTGCTTATT+AGG + chr1_4:9121153-9121172 Msa0148720:intron 15.0%
!!! TTACTTCATTTACTAATTTT+AGG + chr1_4:9121941-9121960 Msa0148720:intron 15.0%
!!! ATCTTTTAATTTTGCTTATT+AGG + chr1_4:9121153-9121172 Msa0148720:intron 15.0%
!!! TTACTTCATTTACTAATTTT+AGG + chr1_4:9121941-9121960 Msa0148720:intron 15.0%
!! ATGATAAGGTAACTAATTAT+TGG + chr1_4:9121031-9121050 Msa0148720:intron 20.0%
!!! TTAACAATTTTGATGTGTTT+AGG + chr1_4:9121215-9121234 Msa0148720:intron 20.0%
!!! AGGTATATACATATTTTATG+TGG + chr1_4:9121816-9121835 Msa0148720:intron 20.0%
!! TGATTCTATGAAAAAAATTG+TGG + chr1_4:9121900-9121919 Msa0148720:intron 20.0%
!!! AATTCTTTACACTTGTATTT+TGG - chr1_4:9122355-9122374 None:intergenic 20.0%
!! ACTTAGATAGTATCAAAATA+TGG + chr1_4:9122385-9122404 Msa0148720:three_prime_UTR 20.0%
!!! AAGTAAATTTTCTTTCCTTT+CGG - chr1_4:9122444-9122463 None:intergenic 20.0%
!! ATGATAAGGTAACTAATTAT+TGG + chr1_4:9121031-9121050 Msa0148720:intron 20.0%
!!! TTAACAATTTTGATGTGTTT+AGG + chr1_4:9121215-9121234 Msa0148720:intron 20.0%
!!! AGGTATATACATATTTTATG+TGG + chr1_4:9121816-9121835 Msa0148720:intron 20.0%
!! TGATTCTATGAAAAAAATTG+TGG + chr1_4:9121900-9121919 Msa0148720:intron 20.0%
!!! AATTCTTTACACTTGTATTT+TGG - chr1_4:9122355-9122374 None:intergenic 20.0%
!! ACTTAGATAGTATCAAAATA+TGG + chr1_4:9122385-9122404 Msa0148720:three_prime_UTR 20.0%
!!! AAGTAAATTTTCTTTCCTTT+CGG - chr1_4:9122444-9122463 None:intergenic 20.0%
!!! ATTGGTTTTTTTGTTGTTGA+AGG + chr1_4:9121049-9121068 Msa0148720:intron 25.0%
!!! TTTGTTGTTGAAGGAATTAT+TGG + chr1_4:9121058-9121077 Msa0148720:intron 25.0%
! GGTTTCTTATTATACTTAGT+AGG + chr1_4:9121079-9121098 Msa0148720:intron 25.0%
! TCATCTTCAAGAAATCAAAA+AGG + chr1_4:9121338-9121357 Msa0148720:CDS 25.0%
! AAATCAAAAAGGAAGAACAT+AGG + chr1_4:9121349-9121368 Msa0148720:CDS 25.0%
! AATCAAAAAGGAAGAACATA+GGG + chr1_4:9121350-9121369 Msa0148720:CDS 25.0%
! ATAAGTTCAAATCATCGAAT+TGG + chr1_4:9121378-9121397 Msa0148720:CDS 25.0%
! TAAGTTCAAATCATCGAATT+GGG + chr1_4:9121379-9121398 Msa0148720:CDS 25.0%
!! ACAACAAATTAGTGATAATG+AGG - chr1_4:9121515-9121534 None:intergenic 25.0%
! TAATAAAAGATGGCTATCAA+TGG + chr1_4:9121702-9121721 Msa0148720:CDS 25.0%
!!! TGTATATACCTTCTTTTTTG+CGG - chr1_4:9121807-9121826 None:intergenic 25.0%
! TGCAAAAATGCATAAATGAT+AGG + chr1_4:9121964-9121983 Msa0148720:CDS 25.0%
!! AAATCTCGATTTGAATCTTT+CGG + chr1_4:9122292-9122311 Msa0148720:CDS 25.0%
!! TTTTGATACTATCTAAGTAC+TGG - chr1_4:9122383-9122402 None:intergenic 25.0%
!!! ATTGGTTTTTTTGTTGTTGA+AGG + chr1_4:9121049-9121068 Msa0148720:intron 25.0%
!!! TTTGTTGTTGAAGGAATTAT+TGG + chr1_4:9121058-9121077 Msa0148720:intron 25.0%
! GGTTTCTTATTATACTTAGT+AGG + chr1_4:9121079-9121098 Msa0148720:intron 25.0%
! TCATCTTCAAGAAATCAAAA+AGG + chr1_4:9121338-9121357 Msa0148720:CDS 25.0%
! AAATCAAAAAGGAAGAACAT+AGG + chr1_4:9121349-9121368 Msa0148720:CDS 25.0%
! AATCAAAAAGGAAGAACATA+GGG + chr1_4:9121350-9121369 Msa0148720:CDS 25.0%
! ATAAGTTCAAATCATCGAAT+TGG + chr1_4:9121378-9121397 Msa0148720:CDS 25.0%
! TAAGTTCAAATCATCGAATT+GGG + chr1_4:9121379-9121398 Msa0148720:CDS 25.0%
!! ACAACAAATTAGTGATAATG+AGG - chr1_4:9121515-9121534 None:intergenic 25.0%
! TAATAAAAGATGGCTATCAA+TGG + chr1_4:9121702-9121721 Msa0148720:CDS 25.0%
!!! TGTATATACCTTCTTTTTTG+CGG - chr1_4:9121807-9121826 None:intergenic 25.0%
! TGCAAAAATGCATAAATGAT+AGG + chr1_4:9121964-9121983 Msa0148720:CDS 25.0%
!! AAATCTCGATTTGAATCTTT+CGG + chr1_4:9122292-9122311 Msa0148720:CDS 25.0%
!! TTTTGATACTATCTAAGTAC+TGG - chr1_4:9122383-9122402 None:intergenic 25.0%
!! ACAATTTTGATGTGTTTAGG+TGG + chr1_4:9121218-9121237 Msa0148720:intron 30.0%
ATCAAAAAGGAAGAACATAG+GGG + chr1_4:9121351-9121370 Msa0148720:CDS 30.0%
! CTTTTGCTTGAATCAATGTT+AGG - chr1_4:9121411-9121430 None:intergenic 30.0%
TCAACCTAATGATGAAAGTT+TGG + chr1_4:9121485-9121504 Msa0148720:CDS 30.0%
CATACCAAACTTTCATCATT+AGG - chr1_4:9121492-9121511 None:intergenic 30.0%
!!! TATATACCTTCTTTTTTGCG+GGG - chr1_4:9121805-9121824 None:intergenic 30.0%
!!! GTATATACCTTCTTTTTTGC+GGG - chr1_4:9121806-9121825 None:intergenic 30.0%
TGATTTCAAGAAAGCTTACA+AGG + chr1_4:9121852-9121871 Msa0148720:intron 30.0%
TTAGAGATTGATGAACCTTT+AGG - chr1_4:9122068-9122087 None:intergenic 30.0%
TCTTTGTCATTCAATGTTGT+TGG - chr1_4:9122101-9122120 None:intergenic 30.0%
AAAATTTACTTGCGACGTTT+GGG + chr1_4:9122453-9122472 Msa0148720:three_prime_UTR 30.0%
CGAAGAGATAAACTCAAATA+AGG - chr1_4:9122482-9122501 None:intergenic 30.0%
!! GTTGTTTTCATAAGTTGTCA+AGG - chr1_4:9122593-9122612 None:intergenic 30.0%
!! ACAATTTTGATGTGTTTAGG+TGG + chr1_4:9121218-9121237 Msa0148720:intron 30.0%
ATCAAAAAGGAAGAACATAG+GGG + chr1_4:9121351-9121370 Msa0148720:CDS 30.0%
! CTTTTGCTTGAATCAATGTT+AGG - chr1_4:9121411-9121430 None:intergenic 30.0%
TCAACCTAATGATGAAAGTT+TGG + chr1_4:9121485-9121504 Msa0148720:CDS 30.0%
CATACCAAACTTTCATCATT+AGG - chr1_4:9121492-9121511 None:intergenic 30.0%
!!! TATATACCTTCTTTTTTGCG+GGG - chr1_4:9121805-9121824 None:intergenic 30.0%
!!! GTATATACCTTCTTTTTTGC+GGG - chr1_4:9121806-9121825 None:intergenic 30.0%
TGATTTCAAGAAAGCTTACA+AGG + chr1_4:9121852-9121871 Msa0148720:intron 30.0%
TTAGAGATTGATGAACCTTT+AGG - chr1_4:9122068-9122087 None:intergenic 30.0%
TCTTTGTCATTCAATGTTGT+TGG - chr1_4:9122101-9122120 None:intergenic 30.0%
AAAATTTACTTGCGACGTTT+GGG + chr1_4:9122453-9122472 Msa0148720:three_prime_UTR 30.0%
CGAAGAGATAAACTCAAATA+AGG - chr1_4:9122482-9122501 None:intergenic 30.0%
!! GTTGTTTTCATAAGTTGTCA+AGG - chr1_4:9122593-9122612 None:intergenic 30.0%
GGCTATTAGAATGGATGATA+AGG + chr1_4:9121017-9121036 Msa0148720:CDS 35.0%
TAAAAGATGGCTATCAATGG+AGG + chr1_4:9121705-9121724 Msa0148720:CDS 35.0%
ATCCTTGTTGCAACATATGA+TGG + chr1_4:9121990-9122009 Msa0148720:CDS 35.0%
GATGGTTTGAATGACTCATT+AGG - chr1_4:9122035-9122054 None:intergenic 35.0%
CTCACAAAGTCTAGTATTTG+TGG - chr1_4:9122126-9122145 None:intergenic 35.0%
GAAGTCAGGATCTTTGATTA+GGG - chr1_4:9122207-9122226 None:intergenic 35.0%
TGAAGTCAGGATCTTTGATT+AGG - chr1_4:9122208-9122227 None:intergenic 35.0%
CTTATGTTCTTGATCAGTGA+CGG - chr1_4:9122261-9122280 None:intergenic 35.0%
GAAAATTTACTTGCGACGTT+TGG + chr1_4:9122452-9122471 Msa0148720:three_prime_UTR 35.0%
TATCTCTTCGTATAAGCACT+TGG + chr1_4:9122492-9122511 Msa0148720:three_prime_UTR 35.0%
ATAAGCACTTGGAGACTATT+TGG + chr1_4:9122503-9122522 Msa0148720:three_prime_UTR 35.0%
TAAGCACTTGGAGACTATTT+GGG + chr1_4:9122504-9122523 Msa0148720:three_prime_UTR 35.0%
GGCTATTAGAATGGATGATA+AGG + chr1_4:9121017-9121036 Msa0148720:CDS 35.0%
TAAAAGATGGCTATCAATGG+AGG + chr1_4:9121705-9121724 Msa0148720:CDS 35.0%
ATCCTTGTTGCAACATATGA+TGG + chr1_4:9121990-9122009 Msa0148720:CDS 35.0%
GATGGTTTGAATGACTCATT+AGG - chr1_4:9122035-9122054 None:intergenic 35.0%
CTCACAAAGTCTAGTATTTG+TGG - chr1_4:9122126-9122145 None:intergenic 35.0%
GAAGTCAGGATCTTTGATTA+GGG - chr1_4:9122207-9122226 None:intergenic 35.0%
TGAAGTCAGGATCTTTGATT+AGG - chr1_4:9122208-9122227 None:intergenic 35.0%
CTTATGTTCTTGATCAGTGA+CGG - chr1_4:9122261-9122280 None:intergenic 35.0%
GAAAATTTACTTGCGACGTT+TGG + chr1_4:9122452-9122471 Msa0148720:three_prime_UTR 35.0%
TATCTCTTCGTATAAGCACT+TGG + chr1_4:9122492-9122511 Msa0148720:three_prime_UTR 35.0%
ATAAGCACTTGGAGACTATT+TGG + chr1_4:9122503-9122522 Msa0148720:three_prime_UTR 35.0%
TAAGCACTTGGAGACTATTT+GGG + chr1_4:9122504-9122523 Msa0148720:three_prime_UTR 35.0%
AGAGTTACAACAAGTGAGAG+AGG + chr1_4:9121254-9121273 Msa0148720:CDS 40.0%
GTTCGTACAAAGACTTGTAG+TGG - chr1_4:9121465-9121484 None:intergenic 40.0%
! ATGGAGGAAGTATGGTCAAA+AGG + chr1_4:9121721-9121740 Msa0148720:CDS 40.0%
!! TCTAGGAGAAGCATTGTCTT+TGG - chr1_4:9121750-9121769 None:intergenic 40.0%
CTTCTCCTAGAGCTTACTTT+AGG + chr1_4:9121759-9121778 Msa0148720:CDS 40.0%
CTCCATCATATGTTGCAACA+AGG - chr1_4:9121995-9122014 None:intergenic 40.0%
ATGACTCATTAGGAACACCA+TGG - chr1_4:9122025-9122044 None:intergenic 40.0%
GATTGATGAACCTTTAGGTG+TGG - chr1_4:9122063-9122082 None:intergenic 40.0%
GAGAATGTCATGCAACAGTT+TGG + chr1_4:9122143-9122162 Msa0148720:CDS 40.0%
GATCAAGAACATAAGCGACA+AGG + chr1_4:9122266-9122285 Msa0148720:CDS 40.0%
! TCTCGATTTGAATCTTTCGG+AGG + chr1_4:9122295-9122314 Msa0148720:CDS 40.0%
GGAGTGAAATGAAGGTTTCT+TGG + chr1_4:9122316-9122335 Msa0148720:exon 40.0%
AGTTCAGTGATATCACCGAA+AGG + chr1_4:9122426-9122445 Msa0148720:three_prime_UTR 40.0%
AGAGTTACAACAAGTGAGAG+AGG + chr1_4:9121254-9121273 Msa0148720:CDS 40.0%
GTTCGTACAAAGACTTGTAG+TGG - chr1_4:9121465-9121484 None:intergenic 40.0%
! ATGGAGGAAGTATGGTCAAA+AGG + chr1_4:9121721-9121740 Msa0148720:CDS 40.0%
!! TCTAGGAGAAGCATTGTCTT+TGG - chr1_4:9121750-9121769 None:intergenic 40.0%
CTTCTCCTAGAGCTTACTTT+AGG + chr1_4:9121759-9121778 Msa0148720:CDS 40.0%
CTCCATCATATGTTGCAACA+AGG - chr1_4:9121995-9122014 None:intergenic 40.0%
ATGACTCATTAGGAACACCA+TGG - chr1_4:9122025-9122044 None:intergenic 40.0%
GATTGATGAACCTTTAGGTG+TGG - chr1_4:9122063-9122082 None:intergenic 40.0%
GAGAATGTCATGCAACAGTT+TGG + chr1_4:9122143-9122162 Msa0148720:CDS 40.0%
GATCAAGAACATAAGCGACA+AGG + chr1_4:9122266-9122285 Msa0148720:CDS 40.0%
! TCTCGATTTGAATCTTTCGG+AGG + chr1_4:9122295-9122314 Msa0148720:CDS 40.0%
GGAGTGAAATGAAGGTTTCT+TGG + chr1_4:9122316-9122335 Msa0148720:exon 40.0%
AGTTCAGTGATATCACCGAA+AGG + chr1_4:9122426-9122445 Msa0148720:three_prime_UTR 40.0%
! TGTAGTGGCTTTTGTGCTGT+GGG - chr1_4:9121450-9121469 None:intergenic 45.0%
! TTGTAGTGGCTTTTGTGCTG+TGG - chr1_4:9121451-9121470 None:intergenic 45.0%
GGCTATCAATGGAGGAAGTA+TGG + chr1_4:9121713-9121732 Msa0148720:CDS 45.0%
GAGCACCTAAAGTAAGCTCT+AGG - chr1_4:9121767-9121786 None:intergenic 45.0%
AGCTTACTTTAGGTGCTCCA+TGG + chr1_4:9121769-9121788 Msa0148720:CDS 45.0%
!!! TTCTTTTTTGCGGGGCAACT+AGG - chr1_4:9121797-9121816 None:intergenic 45.0%
TAGTTGCCCCGCAAAAAAGA+AGG + chr1_4:9121796-9121815 Msa0148720:CDS 45.0%
! TATGATGGAGAGCACAACCA+TGG + chr1_4:9122005-9122024 Msa0148720:CDS 45.0%
CCTTTAGGTGTGGATGAAGA+TGG - chr1_4:9122053-9122072 None:intergenic 45.0%
CCATCTTCATCCACACCTAA+AGG + chr1_4:9122050-9122069 Msa0148720:CDS 45.0%
GTCATGCAACAGTTTGGCTA+TGG + chr1_4:9122149-9122168 Msa0148720:CDS 45.0%
TGCAACAGTTTGGCTATGGA+AGG + chr1_4:9122153-9122172 Msa0148720:CDS 45.0%
CTTTCGGAGGAGTGAAATGA+AGG + chr1_4:9122308-9122327 Msa0148720:exon 45.0%
! TGTAGTGGCTTTTGTGCTGT+GGG - chr1_4:9121450-9121469 None:intergenic 45.0%
! TTGTAGTGGCTTTTGTGCTG+TGG - chr1_4:9121451-9121470 None:intergenic 45.0%
GGCTATCAATGGAGGAAGTA+TGG + chr1_4:9121713-9121732 Msa0148720:CDS 45.0%
GAGCACCTAAAGTAAGCTCT+AGG - chr1_4:9121767-9121786 None:intergenic 45.0%
AGCTTACTTTAGGTGCTCCA+TGG + chr1_4:9121769-9121788 Msa0148720:CDS 45.0%
!!! TTCTTTTTTGCGGGGCAACT+AGG - chr1_4:9121797-9121816 None:intergenic 45.0%
TAGTTGCCCCGCAAAAAAGA+AGG + chr1_4:9121796-9121815 Msa0148720:CDS 45.0%
! TATGATGGAGAGCACAACCA+TGG + chr1_4:9122005-9122024 Msa0148720:CDS 45.0%
CCTTTAGGTGTGGATGAAGA+TGG - chr1_4:9122053-9122072 None:intergenic 45.0%
CCATCTTCATCCACACCTAA+AGG + chr1_4:9122050-9122069 Msa0148720:CDS 45.0%
GTCATGCAACAGTTTGGCTA+TGG + chr1_4:9122149-9122168 Msa0148720:CDS 45.0%
TGCAACAGTTTGGCTATGGA+AGG + chr1_4:9122153-9122172 Msa0148720:CDS 45.0%
CTTTCGGAGGAGTGAAATGA+AGG + chr1_4:9122308-9122327 Msa0148720:exon 45.0%
GCTAATGCTGCAGTGAAGTC+AGG - chr1_4:9122221-9122240 None:intergenic 50.0%
GCTAATGCTGCAGTGAAGTC+AGG - chr1_4:9122221-9122240 None:intergenic 50.0%
TGCGGGGCAACTAGGAGCCA+TGG - chr1_4:9121789-9121808 None:intergenic 65.0%
TGCGGGGCAACTAGGAGCCA+TGG - chr1_4:9121789-9121808 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 9121015 9122623 9121015 ID=Msa0148720;Name=Msa0148720
chr1_4 mRNA 9121015 9122623 9121015 ID=Msa0148720-mRNA-1;Parent=Msa0148720;Name=Msa0148720-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0.66|0.5|1|1|1|4|301|256
chr1_4 exon 9121015 9121038 9121015 ID=Msa0148720-mRNA-1:exon:3844;Parent=Msa0148720-mRNA-1
chr1_4 exon 9121237 9121506 9121237 ID=Msa0148720-mRNA-1:exon:3845;Parent=Msa0148720-mRNA-1
chr1_4 exon 9121701 9121817 9121701 ID=Msa0148720-mRNA-1:exon:3846;Parent=Msa0148720-mRNA-1
chr1_4 exon 9121963 9122623 9121963 ID=Msa0148720-mRNA-1:exon:3847;Parent=Msa0148720-mRNA-1
chr1_4 CDS 9121015 9121038 9121015 ID=Msa0148720-mRNA-1:cds;Parent=Msa0148720-mRNA-1
chr1_4 CDS 9121237 9121506 9121237 ID=Msa0148720-mRNA-1:cds;Parent=Msa0148720-mRNA-1
chr1_4 CDS 9121701 9121817 9121701 ID=Msa0148720-mRNA-1:cds;Parent=Msa0148720-mRNA-1
chr1_4 CDS 9121963 9122322 9121963 ID=Msa0148720-mRNA-1:cds;Parent=Msa0148720-mRNA-1
chr1_4 three_prime_UTR 9122323 9122623 9122323 ID=Msa0148720-mRNA-1:three_prime_utr;Parent=Msa0148720-mRNA-1
Gene Sequence

>Msa0148720

ATGGCTATTAGAATGGATGATAAGGTGGAAACTCTTGAATTAGAGTTACAACAAGTGAGAGAGGAGAACAATACTCTAAGATTCATGCTTGAAGTTATGAGTATCAAATGCACAAAGCTTGAATCTCATCTTCAAGAAATCAAAAAGGAAGAACATAGGGGAATCATAAGTTCAAATCATCGAATTGGGTCAATACCTAACATTGATTCAAGCAAAAGAGCAAGACTAGAGATTCCCACAGCACAAAAGCCACTACAAGTCTTTGTACGAACTCAACCTAATGATGAAAGTTTGATAATAAAAGATGGCTATCAATGGAGGAAGTATGGTCAAAAGGTTACCAAAGACAATGCTTCTCCTAGAGCTTACTTTAGGTGCTCCATGGCTCCTAGTTGCCCCGCAAAAAAGAAGGTGCAAAAATGCATAAATGATAGGTCTATCCTTGTTGCAACATATGATGGAGAGCACAACCATGGTGTTCCTAATGAGTCATTCAAACCATCTTCATCCACACCTAAAGGTTCATCAATCTCTAATAATAAATTACCAACAACATTGAATGACAAAGAAGCCACAAATACTAGACTTTGTGAGAATGTCATGCAACAGTTTGGCTATGGAAGGCACATTAAAATTGAAGAATATGCAAGTTCCCTAATCAAAGATCCTGACTTCACTGCAGCATTAGCTGAAGCAGTTGCTCGAACCGTCACTGATCAAGAACATAAGCGACAAGGTCTAAATCTCGATTTGAATCTTTCGGAGGAGTGA
Protein sequence

>Msa0148720

MAIRMDDKVETLELELQQVREENNTLRFMLEVMSIKCTKLESHLQEIKKEEHRGIISSNHRIGSIPNIDSSKRARLEIPTAQKPLQVFVRTQPNDESLIIKDGYQWRKYGQKVTKDNASPRAYFRCSMAPSCPAKKKVQKCINDRSILVATYDGEHNHGVPNESFKPSSSTPKGSSISNNKLPTTLNDKEATNTRLCENVMQQFGYGRHIKIEEYASSLIKDPDFTAALAEAVARTVTDQEHKRQGLNLDLNLSEE*