AlfalfaGEDB | Msa0568440

M. sativa cultivar zhongmu-4 / Msa0568440

KEGG: -
GO: GO:0001101 GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0042221 GO:0042742 GO:0043207 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0080090 GO:0098542 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0568440	XP_003630118.1	95.109	184	8	1	1	183	1	184	1.09e-125	361

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0568440	sp\|Q93WU9\|WRK51_ARATH	45.455	165	84	3	6	164	3	167	3.12e-37	130

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0568440	G7LBB4	95.109	184	8	1	1	183	1	184	5.23e-126	361

TFs/TRs:

Gene ID	Type	Classification
Msa0568440	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0054240	Msa0568440	0.800289	1.545178e-48	-8.615850e-47
Msa0054260	Msa0568440	0.818495	1.902616e-52	-8.615850e-47
Msa0054310	Msa0568440	0.827375	1.620248e-54	-8.615850e-47
Msa0054330	Msa0568440	0.802315	5.945960e-49	-8.615850e-47
Msa0085290	Msa0568440	0.825105	5.619441e-54	-8.615850e-47
Msa0100070	Msa0568440	0.822220	2.661085e-53	-8.615850e-47
Msa0100080	Msa0568440	0.805693	1.180027e-49	-8.615850e-47
Msa0100090	Msa0568440	0.819718	1.002394e-52	-8.615850e-47
Msa0148720	Msa0568440	0.823239	1.541737e-53	-8.615850e-47
Msa0212310	Msa0568440	0.815353	9.654508e-52	-8.615850e-47
Msa0377800	Msa0568440	0.817250	3.635950e-52	-8.615850e-47
Msa0426600	Msa0568440	0.812057	5.133283e-51	-8.615850e-47
Msa0472910	Msa0568440	0.804005	2.658782e-49	-8.615850e-47
Msa0517570	Msa0568440	0.815217	1.035095e-51	-8.615850e-47
Msa0568440	Msa0647360	0.800607	1.331596e-48	-8.615850e-47
Msa0568440	Msa0658990	0.897076	1.995109e-76	-8.615850e-47
Msa0568440	Msa0762850	0.802429	5.633281e-49	-8.615850e-47
Msa0568440	Msa0762890	0.802881	4.545956e-49	-8.615850e-47
Msa0568440	Msa0936530	0.823729	1.183874e-53	-8.615850e-47
Msa0568440	Msa0973520	0.810137	1.338249e-50	-8.615850e-47
Msa0568440	Msa1026500	0.809640	1.712695e-50	-8.615850e-47
Msa0568440	Msa1026510	0.807484	4.941193e-50	-8.615850e-47
Msa0568440	Msa1074580	0.804345	2.259210e-49	-8.615850e-47
Msa0568440	Msa1111750	0.825449	4.658788e-54	-8.615850e-47
Msa0568440	Msa1154080	0.820864	5.474353e-53	-8.615850e-47
Msa0568440	Msa1314170	0.815341	9.714027e-52	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0568440	MtrunA17_Chr8g0383251	95.109	184	8	1	1	183	1	184	1.01e-129	361
Msa0568440	MtrunA17_Chr3g0129321	53.535	198	71	7	1	182	1	193	1.67e-57	179
Msa0568440	MtrunA17_Chr1g0150801	48.252	143	58	3	28	163	25	158	1.12e-35	122
Msa0568440	MtrunA17_Chr2g0294231	58.427	89	36	1	90	178	186	273	1.61e-30	114
Msa0568440	MtrunA17_Chr7g0218081	42.975	121	56	1	65	172	355	475	8.95e-29	111
Msa0568440	MtrunA17_Chr7g0218081	56.667	60	25	1	107	166	228	286	2.75e-14	70.1
Msa0568440	MtrunA17_Chr7g0270191	46.957	115	54	2	65	174	100	212	3.35e-28	106
Msa0568440	MtrunA17_Chr4g0051881	58.108	74	31	0	93	166	164	237	1.36e-27	105
Msa0568440	MtrunA17_Chr3g0101131	38.889	144	75	2	42	172	337	480	1.75e-27	107
Msa0568440	MtrunA17_Chr3g0101131	49.206	63	31	1	107	169	243	304	7.14e-11	60.1
Msa0568440	MtrunA17_Chr4g0004911	39.850	133	78	1	35	167	266	396	1.89e-27	107
Msa0568440	MtrunA17_Chr4g0004911	38.793	116	61	3	57	166	132	243	3.68e-16	75.5
Msa0568440	MtrunA17_Chr1g0194481	51.087	92	42	1	81	172	135	223	2.56e-27	105
Msa0568440	MtrunA17_Chr5g0443131	59.211	76	31	0	93	168	143	218	9.42e-27	103
Msa0568440	MtrunA17_Chr4g0042831	46.078	102	42	1	78	166	236	337	1.05e-26	104
Msa0568440	MtrunA17_Chr4g0042831	49.206	63	32	0	107	169	145	207	2.21e-12	64.3
Msa0568440	MtrunA17_Chr3g0079691	52.439	82	39	0	93	174	481	562	1.48e-26	105
Msa0568440	MtrunA17_Chr3g0079691	49.275	69	34	1	107	175	280	347	7.34e-13	65.9
Msa0568440	MtrunA17_Chr5g0418191	58.108	74	31	0	93	166	306	379	1.69e-26	104
Msa0568440	MtrunA17_Chr5g0418191	53.333	60	27	1	107	166	151	209	1.04e-12	65.5
Msa0568440	MtrunA17_Chr7g0243891	56.757	74	32	0	93	166	360	433	1.90e-26	104
Msa0568440	MtrunA17_Chr7g0243891	52.308	65	30	1	102	166	211	274	5.80e-15	72.0
Msa0568440	MtrunA17_Chr7g0249311	51.807	83	40	0	93	175	378	460	2.25e-26	105
Msa0568440	MtrunA17_Chr7g0249311	52.381	63	29	1	107	169	179	240	5.62e-13	66.2
Msa0568440	MtrunA17_Chr7g0224801	56.757	74	32	0	96	169	82	155	2.79e-26	98.6
Msa0568440	MtrunA17_Chr7g0249301	51.807	83	39	1	84	166	270	351	3.02e-26	102
Msa0568440	MtrunA17_Chr7g0249301	50.000	64	31	1	106	169	61	123	2.74e-12	63.9
Msa0568440	MtrunA17_Chr5g0445311	47.778	90	47	0	93	182	350	439	4.56e-26	103
Msa0568440	MtrunA17_Chr5g0445311	50.000	60	29	1	107	166	200	258	7.90e-11	60.1
Msa0568440	MtrunA17_Chr8g0335811	43.697	119	59	2	51	163	94	210	7.39e-26	99.0
Msa0568440	MtrunA17_Chr5g0418781	47.664	107	47	2	57	163	83	180	6.13e-25	97.8
Msa0568440	MtrunA17_Chr7g0248721	47.059	102	48	2	83	179	117	217	1.60e-24	95.5
Msa0568440	MtrunA17_Chr3g0106491	51.250	80	39	0	87	166	345	424	1.81e-24	99.4
Msa0568440	MtrunA17_Chr3g0106491	41.000	100	54	2	67	166	162	256	1.55e-14	70.9
Msa0568440	MtrunA17_Chr4g0068541	48.810	84	43	0	94	177	195	278	3.15e-24	97.8
Msa0568440	MtrunA17_Chr5g0432161	54.054	74	34	0	93	166	407	480	8.94e-24	97.4
Msa0568440	MtrunA17_Chr5g0432161	53.333	60	27	1	107	166	244	302	2.28e-13	67.4
Msa0568440	MtrunA17_Chr3g0129361	54.930	71	32	0	93	163	130	200	2.09e-23	92.4
Msa0568440	MtrunA17_Chr7g0263531	49.333	75	38	0	93	167	347	421	2.35e-22	92.8
Msa0568440	MtrunA17_Chr7g0263531	54.237	59	26	1	108	166	190	247	5.47e-12	63.2
Msa0568440	MtrunA17_Chr5g0447701	54.795	73	33	0	94	166	239	311	5.28e-22	91.7
Msa0568440	MtrunA17_Chr1g0189391	53.947	76	34	1	89	163	79	154	5.55e-22	90.9
Msa0568440	MtrunA17_Chr8g0386241	51.389	72	35	0	94	165	90	161	7.48e-22	87.4
Msa0568440	MtrunA17_Chr8g0383351	54.167	72	32	1	93	163	145	216	1.44e-21	87.8
Msa0568440	MtrunA17_Chr4g0074001	48.750	80	41	0	88	167	340	419	4.35e-21	89.7
Msa0568440	MtrunA17_Chr6g0485431	45.122	82	44	1	89	169	136	217	5.00e-21	88.6
Msa0568440	MtrunA17_Chr1g0188941	47.297	74	39	0	93	166	37	110	7.49e-21	82.8
Msa0568440	MtrunA17_Chr7g0270831	47.297	74	38	1	94	166	203	276	1.31e-20	87.8
Msa0568440	MtrunA17_Chr4g0075201	45.946	74	39	1	94	166	254	327	6.49e-20	86.3
Msa0568440	MtrunA17_Chr4g0051181	48.000	75	38	1	94	167	230	304	3.00e-19	84.3
Msa0568440	MtrunA17_Chr7g0238921	55.932	59	26	0	105	163	122	180	4.00e-19	82.8
Msa0568440	MtrunA17_Chr3g0099641	44.156	77	42	1	94	169	238	314	5.93e-19	83.6
Msa0568440	MtrunA17_Chr2g0302391	47.297	74	38	1	94	166	198	271	1.97e-18	81.6
Msa0568440	MtrunA17_Chr2g0322391	44.595	74	40	1	94	166	336	409	2.20e-18	82.0
Msa0568440	MtrunA17_Chr4g0053281	45.783	83	41	2	84	165	246	325	2.91e-18	80.9
Msa0568440	MtrunA17_Chr1g0147881	43.902	82	45	1	85	165	240	321	7.98e-18	79.3
Msa0568440	MtrunA17_Chr4g0060271	44.000	75	41	1	94	167	242	316	1.21e-17	79.7
Msa0568440	MtrunA17_Chr2g0288871	45.946	74	39	1	94	166	292	365	2.01e-17	79.0
Msa0568440	MtrunA17_Chr7g0216891	42.857	77	43	1	94	169	206	282	2.48e-17	79.0
Msa0568440	MtrunA17_Chr5g0401821	47.945	73	37	1	94	165	186	258	2.80e-17	77.0
Msa0568440	MtrunA17_Chr4g0025051	45.455	77	41	1	94	169	322	398	2.99e-17	78.6
Msa0568440	MtrunA17_Chr2g0333851	47.368	76	37	2	94	166	154	229	4.76e-17	77.0
Msa0568440	MtrunA17_Chr5g0447711	38.824	85	52	0	82	166	205	289	1.42e-16	75.9
Msa0568440	MtrunA17_Chr3g0136961	50.847	59	28	1	106	163	137	195	2.33e-16	75.1
Msa0568440	MtrunA17_Chr1g0184691	42.500	80	45	1	85	163	271	350	6.47e-16	74.3
Msa0568440	MtrunA17_Chr4g0001361	50.794	63	30	1	105	166	160	222	1.10e-15	73.2
Msa0568440	MtrunA17_Chr8g0379461	44.286	70	38	1	108	176	77	146	2.32e-15	71.6
Msa0568440	MtrunA17_Chr4g0025061	41.558	77	44	1	94	169	347	423	4.04e-15	72.4
Msa0568440	MtrunA17_Chr2g0293481	37.755	98	59	2	71	166	230	327	6.07e-15	72.0
Msa0568440	MtrunA17_Chr4g0071521	50.820	61	29	1	104	163	242	302	9.28e-15	70.9
Msa0568440	MtrunA17_Chr2g0319961	43.662	71	39	1	98	167	71	141	1.01e-14	70.1
Msa0568440	MtrunA17_Chr7g0270051	50.000	60	29	1	108	166	54	113	1.52e-14	69.7
Msa0568440	MtrunA17_Chr8g0348311	46.875	64	33	1	104	166	152	215	3.67e-14	69.3
Msa0568440	MtrunA17_Chr7g0228941	33.636	110	67	3	56	164	6	110	4.75e-14	65.5
Msa0568440	MtrunA17_Chr1g0150281	45.614	57	30	1	108	163	141	197	1.27e-13	67.4
Msa0568440	MtrunA17_Chr7g0248691	47.619	63	32	1	105	166	152	214	1.31e-13	67.8
Msa0568440	MtrunA17_Chr1g0202461	39.759	83	47	2	85	166	241	321	1.64e-13	67.8
Msa0568440	MtrunA17_Chr2g0289181	43.939	66	36	1	102	166	9	74	1.17e-12	63.9
Msa0568440	MtrunA17_Chr5g0432071	50.794	63	30	1	107	169	104	165	1.22e-12	63.5
Msa0568440	MtrunA17_Chr2g0284321	39.080	87	49	2	81	166	12	95	1.68e-12	63.5
Msa0568440	MtrunA17_Chr1g0150271	41.270	63	36	1	105	166	99	161	2.07e-12	63.5
Msa0568440	MtrunA17_Chr8g0387501	46.667	60	31	1	108	166	130	189	2.73e-12	63.5
Msa0568440	MtrunA17_Chr3g0139021	44.262	61	33	1	104	163	311	371	2.96e-12	63.9
Msa0568440	MtrunA17_Chr4g0024391	37.662	77	47	1	94	169	216	292	9.70e-12	62.8
Msa0568440	MtrunA17_Chr5g0402931	45.000	60	31	1	104	163	120	177	1.79e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0568440	AT5G64810.1	45.455	165	84	3	6	164	3	167	3.17e-38	130
Msa0568440	AT5G26170.1	75.714	70	17	0	94	163	100	169	2.26e-35	122
Msa0568440	AT5G49520.1	60.000	75	30	0	94	168	208	282	1.19e-28	110
Msa0568440	AT1G29860.1	61.333	75	29	0	94	168	123	197	4.52e-28	106
Msa0568440	AT4G18170.1	59.459	74	30	0	93	166	158	231	1.26e-27	105
Msa0568440	AT5G46350.1	49.451	91	46	0	93	183	169	259	1.26e-27	106
Msa0568440	AT2G47260.1	51.613	93	43	1	77	169	146	236	4.12e-27	105
Msa0568440	AT3G62340.1	61.333	75	29	0	93	167	104	178	4.80e-27	103
Msa0568440	AT3G01970.1	55.556	72	32	0	94	165	52	123	9.65e-27	99.4
Msa0568440	AT2G46130.1	55.128	78	35	0	86	163	9	86	1.46e-26	97.8
Msa0568440	AT2G38470.1	56.757	74	32	0	93	166	348	421	3.88e-26	104
Msa0568440	AT2G38470.1	51.667	60	28	1	107	166	184	242	2.64e-12	64.7
Msa0568440	AT5G41570.1	52.500	80	38	0	84	163	75	154	1.47e-25	97.4
Msa0568440	AT5G13080.1	56.944	72	31	0	94	165	54	125	1.59e-25	96.3
Msa0568440	AT1G69310.4	57.534	73	31	0	93	165	133	205	1.79e-25	99.8
Msa0568440	AT1G69310.2	57.534	73	31	0	93	165	133	205	1.79e-25	99.8
Msa0568440	AT1G69310.1	57.534	73	31	0	93	165	133	205	1.79e-25	99.8
Msa0568440	AT2G44745.1	44.444	126	66	3	42	166	81	203	2.75e-25	97.8
Msa0568440	AT5G56270.1	55.405	74	33	0	93	166	473	546	3.46e-25	102
Msa0568440	AT5G56270.1	53.333	60	27	1	107	166	273	331	8.99e-13	66.2
Msa0568440	AT3G01080.1	55.405	74	33	0	93	166	292	365	3.52e-25	100
Msa0568440	AT3G01080.1	53.333	60	27	1	107	166	167	225	4.37e-13	67.0
Msa0568440	AT3G01080.2	55.405	74	33	0	93	166	330	403	3.60e-25	101
Msa0568440	AT3G01080.2	53.333	60	27	1	107	166	205	263	3.79e-13	67.0
Msa0568440	AT1G13960.2	54.054	74	34	0	93	166	242	315	4.20e-25	100
Msa0568440	AT1G13960.2	50.667	75	33	2	95	166	61	134	1.04e-15	74.3
Msa0568440	AT5G07100.2	55.405	74	33	0	93	166	127	200	4.25e-25	97.1
Msa0568440	AT5G07100.2	48.333	60	31	0	107	166	24	83	6.10e-12	62.4
Msa0568440	AT5G07100.4	55.405	74	33	0	93	166	127	200	4.25e-25	97.1
Msa0568440	AT5G07100.4	48.333	60	31	0	107	166	24	83	6.10e-12	62.4
Msa0568440	AT5G07100.5	55.405	74	33	0	93	166	127	200	4.25e-25	97.1
Msa0568440	AT5G07100.5	48.333	60	31	0	107	166	24	83	6.10e-12	62.4
Msa0568440	AT5G07100.3	55.405	74	33	0	93	166	127	200	4.25e-25	97.1
Msa0568440	AT5G07100.3	48.333	60	31	0	107	166	24	83	6.10e-12	62.4
Msa0568440	AT1G64000.1	53.659	82	38	0	82	163	89	170	5.43e-25	96.3
Msa0568440	AT1G13960.1	54.054	74	34	0	93	166	395	468	5.95e-25	100
Msa0568440	AT1G13960.1	50.667	75	33	2	95	166	214	287	6.82e-16	75.1
Msa0568440	AT2G21900.1	47.917	96	46	2	85	176	83	178	6.19e-25	96.3
Msa0568440	AT5G07100.1	55.405	74	33	0	93	166	220	293	7.24e-25	98.6
Msa0568440	AT5G07100.1	48.333	60	31	0	107	166	117	176	4.05e-12	63.5
Msa0568440	AT4G26640.5	51.250	80	39	0	93	172	191	270	7.85e-25	99.4
Msa0568440	AT4G26640.5	50.000	62	30	1	105	166	33	93	2.60e-11	61.6
Msa0568440	AT4G26640.6	51.250	80	39	0	93	172	191	270	7.85e-25	99.4
Msa0568440	AT4G26640.6	50.000	62	30	1	105	166	33	93	2.60e-11	61.6
Msa0568440	AT4G26640.4	51.250	80	39	0	93	172	191	270	7.85e-25	99.4
Msa0568440	AT4G26640.4	50.000	62	30	1	105	166	33	93	2.60e-11	61.6
Msa0568440	AT4G26640.3	51.250	80	39	0	93	172	191	270	7.85e-25	99.4
Msa0568440	AT4G26640.3	50.000	62	30	1	105	166	33	93	2.60e-11	61.6
Msa0568440	AT4G26640.1	51.250	80	39	0	93	172	295	374	1.12e-24	100
Msa0568440	AT4G26640.1	50.000	62	30	1	105	166	137	197	1.59e-11	62.4
Msa0568440	AT4G26640.7	51.250	80	39	0	93	172	327	406	1.14e-24	100
Msa0568440	AT4G26640.7	50.000	62	30	1	105	166	169	229	1.40e-11	62.8
Msa0568440	AT4G26640.2	51.250	80	39	0	93	172	367	446	1.18e-24	100
Msa0568440	AT4G26640.2	50.000	62	30	1	105	166	209	269	1.34e-11	62.8
Msa0568440	AT2G03340.1	52.703	74	35	0	93	166	401	474	8.57e-24	97.8
Msa0568440	AT2G03340.1	56.667	60	25	1	107	166	250	308	4.87e-15	72.8
Msa0568440	AT4G39410.1	52.326	86	40	1	78	163	195	279	8.93e-24	95.5
Msa0568440	AT2G04880.2	42.857	112	59	2	58	166	233	342	1.27e-23	97.1
Msa0568440	AT2G04880.2	43.750	64	35	1	104	167	108	170	5.55e-11	60.8
Msa0568440	AT2G04880.1	42.857	112	59	2	58	166	257	366	1.33e-23	97.1
Msa0568440	AT2G04880.1	43.750	64	35	1	104	167	108	170	5.53e-11	60.8
Msa0568440	AT4G26440.1	48.780	82	42	0	93	174	358	439	1.79e-23	97.1
Msa0568440	AT4G26440.1	51.667	60	28	1	107	166	178	236	3.91e-11	61.2
Msa0568440	AT2G46130.2	52.564	78	33	1	86	163	9	82	4.95e-23	88.6
Msa0568440	AT2G30250.1	45.556	90	43	1	77	166	304	387	2.91e-22	92.8
Msa0568440	AT2G30250.1	48.649	74	36	2	107	179	166	238	5.86e-11	60.8
Msa0568440	AT1G69310.3	53.425	73	30	1	93	165	133	201	1.05e-21	89.7
Msa0568440	AT4G04450.2	47.297	74	38	1	94	166	185	258	3.95e-20	87.0
Msa0568440	AT5G43290.1	62.712	59	22	0	105	163	112	170	4.47e-20	85.1
Msa0568440	AT1G55600.1	42.045	88	51	0	79	166	279	366	5.32e-20	86.7
Msa0568440	AT4G04450.1	47.297	74	38	1	94	166	279	352	1.05e-19	86.3
Msa0568440	AT1G68150.1	46.667	75	39	1	94	167	222	296	2.95e-19	84.3
Msa0568440	AT2G23320.1	47.674	86	41	2	81	165	217	299	4.07e-19	83.2
Msa0568440	AT4G30935.1	45.946	74	40	0	94	167	318	391	4.91e-19	84.0
Msa0568440	AT1G62300.1	47.297	74	38	1	94	166	299	372	5.13e-19	84.0
Msa0568440	AT5G15130.2	44.156	77	42	1	94	169	172	248	6.93e-19	83.6
Msa0568440	AT5G15130.1	44.156	77	42	1	94	169	214	290	7.37e-19	83.6
Msa0568440	AT4G22070.4	47.297	74	38	1	94	166	284	357	8.78e-19	83.6
Msa0568440	AT4G22070.3	47.297	74	38	1	94	166	284	357	8.78e-19	83.6
Msa0568440	AT4G22070.2	47.297	74	38	1	94	166	284	357	8.78e-19	83.6
Msa0568440	AT4G22070.1	47.297	74	38	1	94	166	284	357	8.78e-19	83.6
Msa0568440	AT4G01720.1	44.595	74	40	1	94	166	226	299	2.80e-18	82.0
Msa0568440	AT1G18860.1	44.595	74	40	1	94	166	226	299	1.71e-17	79.7
Msa0568440	AT4G24240.1	53.968	63	28	1	104	165	278	340	3.38e-17	78.2
Msa0568440	AT1G29280.1	50.794	63	30	1	108	169	75	137	7.57e-17	76.3
Msa0568440	AT3G04670.1	46.739	92	39	3	73	163	237	319	8.00e-17	77.0
Msa0568440	AT2G25000.2	47.692	65	33	1	106	169	102	166	1.05e-16	75.5
Msa0568440	AT2G25000.4	47.692	65	33	1	106	169	102	166	1.05e-16	75.5
Msa0568440	AT2G25000.3	47.692	65	33	1	106	169	124	188	1.49e-16	75.1
Msa0568440	AT1G80840.1	46.032	63	33	1	105	166	144	206	1.94e-16	75.9
Msa0568440	AT2G25000.1	47.692	65	33	1	106	169	145	209	2.50e-16	75.1
Msa0568440	AT5G28650.1	39.344	122	59	4	43	163	212	319	3.11e-16	75.5
Msa0568440	AT2G24570.1	37.500	104	63	2	62	163	197	300	3.41e-16	75.1
Msa0568440	AT2G34830.2	42.391	92	45	3	83	166	193	284	4.22e-16	75.5
Msa0568440	AT2G34830.1	42.391	92	45	3	83	166	184	275	4.83e-16	75.5
Msa0568440	AT4G31550.2	47.727	88	36	4	79	163	222	302	6.81e-16	74.3
Msa0568440	AT4G31550.1	41.250	80	46	1	85	163	224	303	1.22e-15	73.6
Msa0568440	AT1G30650.1	40.860	93	47	3	83	167	186	278	1.71e-15	73.9
Msa0568440	AT4G31800.2	43.939	66	36	1	106	170	110	175	3.70e-15	71.2
Msa0568440	AT3G58710.2	36.220	127	72	4	51	169	8	133	4.25e-15	71.6
Msa0568440	AT4G31800.1	43.939	66	36	1	106	170	175	240	6.32e-15	71.6
Msa0568440	AT2G37260.3	46.875	64	34	0	102	165	264	327	6.80e-15	71.6
Msa0568440	AT2G37260.3	41.237	97	48	3	78	166	48	143	3.82e-13	67.0
Msa0568440	AT2G37260.2	46.875	64	34	0	102	165	262	325	6.87e-15	71.6
Msa0568440	AT2G37260.2	41.237	97	48	3	78	166	46	141	4.18e-13	66.6
Msa0568440	AT2G37260.1	46.875	64	34	0	102	165	344	407	7.40e-15	72.0
Msa0568440	AT2G37260.1	41.237	97	48	3	78	166	128	223	4.45e-13	67.0
Msa0568440	AT3G58710.1	45.205	73	39	1	98	169	62	134	1.36e-14	70.1
Msa0568440	AT2G30590.1	52.459	61	28	1	104	163	310	370	1.53e-14	70.9
Msa0568440	AT4G01250.1	50.000	60	29	1	108	166	129	188	1.25e-13	67.8
Msa0568440	AT3G01080.3	53.333	60	27	1	107	166	205	263	1.84e-13	67.8
Msa0568440	AT4G23550.1	43.939	66	36	1	102	166	135	200	2.65e-13	67.0
Msa0568440	AT1G69810.2	37.079	89	48	3	81	167	125	207	6.20e-13	66.2
Msa0568440	AT1G69810.1	37.079	89	48	3	81	167	183	265	8.96e-13	65.9
Msa0568440	AT5G52830.1	47.619	63	32	1	105	166	163	225	1.87e-12	64.7
Msa0568440	AT5G45050.4	48.333	60	30	1	108	166	1042	1101	4.46e-12	64.3
Msa0568440	AT5G45050.1	48.333	60	30	1	108	166	1181	1240	4.96e-12	63.9
Msa0568440	AT5G45050.2	48.333	60	30	1	108	166	1153	1212	5.55e-12	63.9
Msa0568440	AT1G66560.1	37.079	89	44	3	97	182	93	172	5.73e-11	60.1

Find 49 sgRNAs with CRISPR-Local

Find 128 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATGAAAACGGTTACTTTGTT+AGG	0.243599	4_1:-70035433	None:intergenic
AAGATCAGAGCTTGAGATTA+TGG	0.274000	4_1:-70037122	Msa0568440:CDS
ATGGGTTGTTGGTATATAAA+TGG	0.277706	4_1:+70037856	None:intergenic
CTTGTTCTAAAGGCTATCTT+TGG	0.312484	4_1:+70037142	None:intergenic
TGAGTAGAGTGAGCAAAATT+TGG	0.322485	4_1:+70037781	None:intergenic
TGCATAGATAAACTCAGTTA+TGG	0.351269	4_1:+70037837	None:intergenic
CAGAATGCACAAAAGAGATT+TGG	0.356317	4_1:+70035581	None:intergenic
TGCATCATTGAATTCTTGAT+TGG	0.365316	4_1:+70037624	None:intergenic
AAATGGGATTAAGCGAAATA+AGG	0.381517	4_1:-70037176	Msa0568440:CDS
TTACATATTATTGTTCTTTG+AGG	0.400718	4_1:+70037600	None:intergenic
TTGCTTGATGATATTTGTAT+TGG	0.407278	4_1:-70037712	Msa0568440:CDS
GCATAGATAAACTCAGTTAT+GGG	0.408805	4_1:+70037838	None:intergenic
TGGCTGCAGTGGGAGGTAAA+TGG	0.416069	4_1:+70035601	None:intergenic
CAAAAGAGATTTGGCTGCAG+TGG	0.429261	4_1:+70035590	None:intergenic
TAAACTCAGTTATGGGTTGT+TGG	0.446707	4_1:+70037845	None:intergenic
TGTTACCTTCTCTAATGATT+CGG	0.455426	4_1:+70037657	None:intergenic
ATAAACTCAGAAGAGGGATT+AGG	0.455505	4_1:+70037751	None:intergenic
TGTGAAGAAAAGGGTGGAAA+GGG	0.465962	4_1:-70035683	Msa0568440:CDS
GGATACAAGTGGAGGAAGTA+CGG	0.474552	4_1:-70037094	Msa0568440:CDS
AAGCTCTGATCTTGTTCTAA+AGG	0.476991	4_1:+70037132	None:intergenic
GAGCTTGAGATTATGGATGA+TGG	0.492012	4_1:-70037115	Msa0568440:CDS
TGGGATGTAATGTGAAGAAA+AGG	0.500798	4_1:-70035693	Msa0568440:CDS
GTGACCGAGATTCTTGATCA+AGG	0.501478	4_1:+70037686	None:intergenic
AAGCGAAATAAGGTAGAAGC+GGG	0.536791	4_1:-70037166	Msa0568440:CDS
ATGTGAAGAAAAGGGTGGAA+AGG	0.539725	4_1:-70035684	Msa0568440:CDS
AACTGAGTTTATCTATGCAA+TGG	0.539741	4_1:-70037833	Msa0568440:exon
CAAAATTTGGAGTAGCATGA+GGG	0.551934	4_1:+70037794	None:intergenic
GATACAAGTGGAGGAAGTAC+GGG	0.554483	4_1:-70037093	Msa0568440:CDS
TGAAGAACAGTCCTAACCTA+AGG	0.563814	4_1:-70037060	Msa0568440:intron
TATGTGATAACAAGTTATGA+AGG	0.564114	4_1:-70035643	Msa0568440:CDS
TACTACAAATGTTCAAGTGT+GGG	0.566302	4_1:-70035712	Msa0568440:CDS
GTCACCTTGATCAAGAATCT+CGG	0.568789	4_1:-70037690	Msa0568440:CDS
AAAAGAGATTTGGCTGCAGT+GGG	0.577682	4_1:+70035591	None:intergenic
ATATAAATGAGAAATGAAAA+CGG	0.580286	4_1:-70035446	Msa0568440:three_prime_UTR
GCAAAATTTGGAGTAGCATG+AGG	0.589246	4_1:+70037793	None:intergenic
CTACTACAAATGTTCAAGTG+TGG	0.597033	4_1:-70035713	Msa0568440:CDS
TTATGGATGATGGATACAAG+TGG	0.599156	4_1:-70037105	Msa0568440:CDS
TGATAGAATACAATTTGAGA+AGG	0.602094	4_1:+70035510	None:intergenic
GATAGTATAAACTCAGAAGA+GGG	0.603484	4_1:+70037745	None:intergenic
AGATAGTATAAACTCAGAAG+AGG	0.605793	4_1:+70037744	None:intergenic
AAGTACCGAATCATTAGAGA+AGG	0.606756	4_1:-70037662	Msa0568440:CDS
GGGAGGTAAATGGAATCTCA+TGG	0.608064	4_1:+70035611	None:intergenic
AGAGATTTGGCTGCAGTGGG+AGG	0.615268	4_1:+70035594	None:intergenic
TAAGCGAAATAAGGTAGAAG+CGG	0.616655	4_1:-70037167	Msa0568440:CDS
GCAGTGAGTTTGCACTGCAG+TGG	0.652818	4_1:+70035540	None:intergenic
TGGATGATGGATACAAGTGG+AGG	0.653822	4_1:-70037102	Msa0568440:CDS
GGGATGTAATGTGAAGAAAA+GGG	0.671707	4_1:-70035692	Msa0568440:CDS
ATGTAATGTGAAGAAAAGGG+TGG	0.682851	4_1:-70035689	Msa0568440:CDS
AGCGAAATAAGGTAGAAGCG+GGG	0.727454	4_1:-70037165	Msa0568440:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTCATTTAAAATTAAGAAAA+GGG	-	chr4_1:70035772-70035791	Msa0568440:intron	10.0%
!!!	GACATTTTATATTTTTTTTA+AGG	-	chr4_1:70036863-70036882	Msa0568440:intron	10.0%
!!!	GTTCATTTAAAATTAAGAAA+AGG	-	chr4_1:70035771-70035790	Msa0568440:intron	15.0%
!!	CAAATACAAAATGAAATTTA+AGG	+	chr4_1:70036324-70036343	None:intergenic	15.0%
!!!	TACTTTAAATTCATTTTCTT+CGG	+	chr4_1:70036506-70036525	None:intergenic	15.0%
!!!	TTGAAATTCAATTTTTAACT+CGG	-	chr4_1:70036583-70036602	Msa0568440:intron	15.0%
!!	TTTAATGAAATTTCAAACTA+GGG	+	chr4_1:70037125-70037144	None:intergenic	15.0%
!!	ATTTAATGAAATTTCAAACT+AGG	+	chr4_1:70037126-70037145	None:intergenic	15.0%
!!	TTAAACATAAAGTCAAAATA+AGG	+	chr4_1:70037211-70037230	None:intergenic	15.0%
!!	ATATAAATGAGAAATGAAAA+CGG	-	chr4_1:70037872-70037891	Msa0568440:five_prime_UTR	15.0%
!!	TTACATATTATTGTTCTTTG+AGG	+	chr4_1:70035721-70035740	None:intergenic	20.0%
!!!	CTAATAAAGTGTACATATTT+TGG	-	chr4_1:70036085-70036104	Msa0568440:intron	20.0%
!!!	TTTTGCAGAAAATACAAAAA+TGG	-	chr4_1:70036125-70036144	Msa0568440:intron	20.0%
!!	TTTGCAGAAAATACAAAAAT+GGG	-	chr4_1:70036126-70036145	Msa0568440:intron	20.0%
!!	TAACTATAAGTTCATGATAT+TGG	-	chr4_1:70036446-70036465	Msa0568440:intron	20.0%
!!!	TGAAATTCAATTTTTAACTC+GGG	-	chr4_1:70036584-70036603	Msa0568440:intron	20.0%
!!!	ACTTTTCAATAGTAAGAATA+TGG	-	chr4_1:70036649-70036668	Msa0568440:intron	20.0%
!!	TGTCTTAACATAAATTAGTT+AGG	-	chr4_1:70037086-70037105	Msa0568440:CDS	20.0%
!!	ATAGTGCAAATATTCTAAAT+AGG	-	chr4_1:70037514-70037533	Msa0568440:intron	20.0%
!!	TTGCTTGATGATATTTGTAT+TGG	-	chr4_1:70035606-70035625	Msa0568440:CDS	25.0%
!	ACAAGAGCAATACAAATTAA+GGG	+	chr4_1:70035753-70035772	None:intergenic	25.0%
!	AACAAGAGCAATACAAATTA+AGG	+	chr4_1:70035754-70035773	None:intergenic	25.0%
!!	TCAAAAGTGTACTTCTAAAT+GGG	+	chr4_1:70035834-70035853	None:intergenic	25.0%
!!	TTCAAAAGTGTACTTCTAAA+TGG	+	chr4_1:70035835-70035854	None:intergenic	25.0%
!!!	TCTAAAAGTGTACATTTTGA+GGG	-	chr4_1:70035904-70035923	Msa0568440:intron	25.0%
!	ATTAATGAAGCATATACCAT+CGG	-	chr4_1:70036016-70036035	Msa0568440:intron	25.0%
!!	GTATTTCCTTTTATTACCTT+AGG	+	chr4_1:70036277-70036296	None:intergenic	25.0%
!!	ATTTGAACAAAGTAGCTTTA+AGG	-	chr4_1:70036339-70036358	Msa0568440:intron	25.0%
!	AGATGATAAAAAACGAGATT+TGG	-	chr4_1:70037152-70037171	Msa0568440:CDS	25.0%
!	TCAACTAGGTTAAGTAATAT+GGG	+	chr4_1:70037314-70037333	None:intergenic	25.0%
!	TCTAAATAGGTCAAGTAATA+TGG	-	chr4_1:70037527-70037546	Msa0568440:intron	25.0%
!	CTAAATAGGTCAAGTAATAT+GGG	-	chr4_1:70037528-70037547	Msa0568440:intron	25.0%
!	TATGTGATAACAAGTTATGA+AGG	-	chr4_1:70037675-70037694	Msa0568440:CDS	25.0%
!	TGATAGAATACAATTTGAGA+AGG	+	chr4_1:70037811-70037830	None:intergenic	25.0%
!	ATGGGTTGTTGGTATATAAA+TGG	+	chr4_1:70035465-70035484	None:intergenic	30.0%
	GCATAGATAAACTCAGTTAT+GGG	+	chr4_1:70035483-70035502	None:intergenic	30.0%
	TGCATAGATAAACTCAGTTA+TGG	+	chr4_1:70035484-70035503	None:intergenic	30.0%
	AACTGAGTTTATCTATGCAA+TGG	-	chr4_1:70035485-70035504	Msa0568440:three_prime_UTR	30.0%
	GATAGTATAAACTCAGAAGA+GGG	+	chr4_1:70035576-70035595	None:intergenic	30.0%
	AGATAGTATAAACTCAGAAG+AGG	+	chr4_1:70035577-70035596	None:intergenic	30.0%
	TGTTACCTTCTCTAATGATT+CGG	+	chr4_1:70035664-70035683	None:intergenic	30.0%
	TGCATCATTGAATTCTTGAT+TGG	+	chr4_1:70035697-70035716	None:intergenic	30.0%
!!	ATCGGTTTTTAAGAAACTAC+GGG	+	chr4_1:70035811-70035830	None:intergenic	30.0%
!!	GATCGGTTTTTAAGAAACTA+CGG	+	chr4_1:70035812-70035831	None:intergenic	30.0%
!!	GTCTAAAAGTGTACATTTTG+AGG	-	chr4_1:70035903-70035922	Msa0568440:intron	30.0%
!!	AGTGTACATATTTTGGATTG+TGG	-	chr4_1:70036092-70036111	Msa0568440:intron	30.0%
!!	GTGTACATATTTTGGATTGT+GGG	-	chr4_1:70036093-70036112	Msa0568440:intron	30.0%
!!	TGTACATATTTTGGATTGTG+GGG	-	chr4_1:70036094-70036113	Msa0568440:intron	30.0%
	AAATGGGATTAAGCGAAATA+AGG	-	chr4_1:70036142-70036161	Msa0568440:intron	30.0%
	TCCTAACCTAAGGTAATAAA+AGG	-	chr4_1:70036268-70036287	Msa0568440:intron	30.0%
!	TCCTTTTATTACCTTAGGTT+AGG	+	chr4_1:70036272-70036291	None:intergenic	30.0%
	TTCAAACATCATAGTACGAT+AGG	+	chr4_1:70036385-70036404	None:intergenic	30.0%
!	ATGATATTGGTCTACTCATT+TGG	-	chr4_1:70036459-70036478	Msa0568440:intron	30.0%
!	TGATATTGGTCTACTCATTT+GGG	-	chr4_1:70036460-70036479	Msa0568440:intron	30.0%
	AATACAATTGATGAGATGTG+TGG	+	chr4_1:70036774-70036793	None:intergenic	30.0%
	AGTTAAACTTAACTAACCAG+TGG	-	chr4_1:70036963-70036982	Msa0568440:intron	30.0%
	AATTAGTTAGGTCTGACAAA+TGG	-	chr4_1:70037098-70037117	Msa0568440:CDS	30.0%
	AAACACATAAAGTCAAAACG+AGG	+	chr4_1:70037239-70037258	None:intergenic	30.0%
	GTCAACTAGGTTAAGTAATA+TGG	+	chr4_1:70037315-70037334	None:intergenic	30.0%
	AGAAAAATAGAGTCAAAGCA+TGG	-	chr4_1:70037484-70037503	Msa0568440:intron	30.0%
	TACTACAAATGTTCAAGTGT+GGG	-	chr4_1:70037606-70037625	Msa0568440:CDS	30.0%
!	TAAACTCAGTTATGGGTTGT+TGG	+	chr4_1:70035476-70035495	None:intergenic	35.0%
!	CAAAATTTGGAGTAGCATGA+GGG	+	chr4_1:70035527-70035546	None:intergenic	35.0%
	TGAGTAGAGTGAGCAAAATT+TGG	+	chr4_1:70035540-70035559	None:intergenic	35.0%
!	TTTTGCTCACTCTACTCATA+TGG	-	chr4_1:70035542-70035561	Msa0568440:three_prime_UTR	35.0%
	ATAAACTCAGAAGAGGGATT+AGG	+	chr4_1:70035570-70035589	None:intergenic	35.0%
!!	AAGTACCGAATCATTAGAGA+AGG	-	chr4_1:70035656-70035675	Msa0568440:CDS	35.0%
	GCAATACAAATTAAGGGAGA+AGG	+	chr4_1:70035747-70035766	None:intergenic	35.0%
!!	TCGGTTTTTAAGAAACTACG+GGG	+	chr4_1:70035810-70035829	None:intergenic	35.0%
	AGTGTACTTCTAAATGGGAT+CGG	+	chr4_1:70035829-70035848	None:intergenic	35.0%
!!	AAGTGTACATTTTGAGGGAT+CGG	-	chr4_1:70035909-70035928	Msa0568440:intron	35.0%
!!	GGATCGGTTTTTAGAAATCA+TGG	-	chr4_1:70035925-70035944	Msa0568440:intron	35.0%
!!!	TGCATGATCGCATTTTTTCA+AGG	+	chr4_1:70035965-70035984	None:intergenic	35.0%
	CAAATGAAGTAATGAACCGA+TGG	+	chr4_1:70036035-70036054	None:intergenic	35.0%
	TAAGCGAAATAAGGTAGAAG+CGG	-	chr4_1:70036151-70036170	Msa0568440:intron	35.0%
!!	CTTGTTCTAAAGGCTATCTT+TGG	+	chr4_1:70036179-70036198	None:intergenic	35.0%
!	AAGCTCTGATCTTGTTCTAA+AGG	+	chr4_1:70036189-70036208	None:intergenic	35.0%
	AAGATCAGAGCTTGAGATTA+TGG	-	chr4_1:70036196-70036215	Msa0568440:intron	35.0%
!!	TTATGGATGATGGATACAAG+TGG	-	chr4_1:70036213-70036232	Msa0568440:intron	35.0%
!!	TGAACAAAGTAGCTTTAAGG+TGG	-	chr4_1:70036342-70036361	Msa0568440:intron	35.0%
!	GATATTGGTCTACTCATTTG+GGG	-	chr4_1:70036461-70036480	Msa0568440:intron	35.0%
	TTTAAGCATCAATCCATCGT+AGG	-	chr4_1:70036736-70036755	Msa0568440:intron	35.0%
	TTAAGCATCAATCCATCGTA+GGG	-	chr4_1:70036737-70036756	Msa0568440:intron	35.0%
	ACTTAACTAACCAGTGGATA+AGG	-	chr4_1:70036969-70036988	Msa0568440:intron	35.0%
	CTAGGTTAAGTAATATGGGA+TGG	+	chr4_1:70037310-70037329	None:intergenic	35.0%
	ATAGGTCAAGTAATATGGGA+CGG	-	chr4_1:70037532-70037551	Msa0568440:intron	35.0%
	ACAAGCTCAAATATTGACAC+AGG	-	chr4_1:70037580-70037599	Msa0568440:intron	35.0%
	CTACTACAAATGTTCAAGTG+TGG	-	chr4_1:70037605-70037624	Msa0568440:CDS	35.0%
	TGGGATGTAATGTGAAGAAA+AGG	-	chr4_1:70037625-70037644	Msa0568440:CDS	35.0%
	GGGATGTAATGTGAAGAAAA+GGG	-	chr4_1:70037626-70037645	Msa0568440:CDS	35.0%
	ATGTAATGTGAAGAAAAGGG+TGG	-	chr4_1:70037629-70037648	Msa0568440:CDS	35.0%
	CAGAATGCACAAAAGAGATT+TGG	+	chr4_1:70037740-70037759	None:intergenic	35.0%
!	GCAAAATTTGGAGTAGCATG+AGG	+	chr4_1:70035528-70035547	None:intergenic	40.0%
	GTCACCTTGATCAAGAATCT+CGG	-	chr4_1:70035628-70035647	Msa0568440:CDS	40.0%
	AAGCGAAATAAGGTAGAAGC+GGG	-	chr4_1:70036152-70036171	Msa0568440:intron	40.0%
	GAGCTTGAGATTATGGATGA+TGG	-	chr4_1:70036203-70036222	Msa0568440:intron	40.0%
	TGAAGAACAGTCCTAACCTA+AGG	-	chr4_1:70036258-70036277	Msa0568440:intron	40.0%
!	CTACTCATTTGGGGTTGAAT+CGG	-	chr4_1:70036470-70036489	Msa0568440:intron	40.0%
	ACTAACCAGTGGATAAGGAT+AGG	-	chr4_1:70036974-70036993	Msa0568440:intron	40.0%
	CTAACCAGTGGATAAGGATA+GGG	-	chr4_1:70036975-70036994	Msa0568440:intron	40.0%
	CAGGTAGCTAGATAATGTTG+TGG	-	chr4_1:70037017-70037036	Msa0568440:intron	40.0%
	GTAGCTAGATAATGTTGTGG+CGG	-	chr4_1:70037020-70037039	Msa0568440:intron	40.0%
	CTGACTAATGGCTTGAGATA+GGG	-	chr4_1:70037055-70037074	Msa0568440:intron	40.0%
	GGTTAAGTAATATGGGATGG+AGG	+	chr4_1:70037307-70037326	None:intergenic	40.0%
	ATGTGAAGAAAAGGGTGGAA+AGG	-	chr4_1:70037634-70037653	Msa0568440:CDS	40.0%
	TGTGAAGAAAAGGGTGGAAA+GGG	-	chr4_1:70037635-70037654	Msa0568440:CDS	40.0%
	AAAAGAGATTTGGCTGCAGT+GGG	+	chr4_1:70037730-70037749	None:intergenic	40.0%
	GTGACCGAGATTCTTGATCA+AGG	+	chr4_1:70035635-70035654	None:intergenic	45.0%
	AGCGAAATAAGGTAGAAGCG+GGG	-	chr4_1:70036153-70036172	Msa0568440:intron	45.0%
!!	TGGATGATGGATACAAGTGG+AGG	-	chr4_1:70036216-70036235	Msa0568440:intron	45.0%
	GGATACAAGTGGAGGAAGTA+CGG	-	chr4_1:70036224-70036243	Msa0568440:intron	45.0%
!	GATACAAGTGGAGGAAGTAC+GGG	-	chr4_1:70036225-70036244	Msa0568440:intron	45.0%
	TTGATGAGATGTGTGGTGTC+AGG	+	chr4_1:70036767-70036786	None:intergenic	45.0%
	CAGTACTACTTCAGGAGTTC+AGG	-	chr4_1:70036998-70037017	Msa0568440:intron	45.0%
!!	CTGGTCATAGTGCTGACTAA+TGG	-	chr4_1:70037043-70037062	Msa0568440:intron	45.0%
	GCTGACTAATGGCTTGAGAT+AGG	-	chr4_1:70037054-70037073	Msa0568440:intron	45.0%
	CATACGTGACAGAGTCAACT+AGG	+	chr4_1:70037328-70037347	None:intergenic	45.0%
	GTCAAGTAATATGGGACGGA+GGG	-	chr4_1:70037536-70037555	Msa0568440:intron	45.0%
	GGGAGGTAAATGGAATCTCA+TGG	+	chr4_1:70037710-70037729	None:intergenic	45.0%
	CAAAAGAGATTTGGCTGCAG+TGG	+	chr4_1:70037731-70037750	None:intergenic	45.0%
	ACTGCCCTATCCTTATCCAC+TGG	+	chr4_1:70036982-70037001	None:intergenic	50.0%
	GGATAGGGCAGTACTACTTC+AGG	-	chr4_1:70036990-70037009	Msa0568440:intron	50.0%
	CTAGATAATGTTGTGGCGGC+TGG	-	chr4_1:70037024-70037043	Msa0568440:intron	50.0%
	GGTCAAGTAATATGGGACGG+AGG	-	chr4_1:70037535-70037554	Msa0568440:intron	50.0%
	TGGCTGCAGTGGGAGGTAAA+TGG	+	chr4_1:70037720-70037739	None:intergenic	55.0%
	AGAGATTTGGCTGCAGTGGG+AGG	+	chr4_1:70037727-70037746	None:intergenic	55.0%
	GCAGTGAGTTTGCACTGCAG+TGG	+	chr4_1:70037781-70037800	None:intergenic	55.0%
	GTGTCAGGTGCTCCCTACGA+TGG	+	chr4_1:70036752-70036771	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_1	gene	70035435	70037905	70035435	ID=Msa0568440;Name=Msa0568440
chr4_1	mRNA	70035435	70037905	70035435	ID=Msa0568440-mRNA-1;Parent=Msa0568440;Name=Msa0568440-mRNA-1;_AED=0.12;_eAED=0.12;_QI=69\|1\|1\|1\|1\|1\|3\|132\|183
chr4_1	exon	70035435	70035738	70035435	ID=Msa0568440-mRNA-1:exon:23558;Parent=Msa0568440-mRNA-1
chr4_1	exon	70037061	70037207	70037061	ID=Msa0568440-mRNA-1:exon:23557;Parent=Msa0568440-mRNA-1
chr4_1	exon	70037604	70037905	70037604	ID=Msa0568440-mRNA-1:exon:23556;Parent=Msa0568440-mRNA-1
chr4_1	five_prime_UTR	70037837	70037905	70037837	ID=Msa0568440-mRNA-1:five_prime_utr;Parent=Msa0568440-mRNA-1
chr4_1	CDS	70037604	70037836	70037604	ID=Msa0568440-mRNA-1:cds;Parent=Msa0568440-mRNA-1
chr4_1	CDS	70037061	70037207	70037061	ID=Msa0568440-mRNA-1:cds;Parent=Msa0568440-mRNA-1
chr4_1	CDS	70035567	70035738	70035567	ID=Msa0568440-mRNA-1:cds;Parent=Msa0568440-mRNA-1
chr4_1	three_prime_UTR	70035435	70035566	70035435	ID=Msa0568440-mRNA-1:three_prime_utr;Parent=Msa0568440-mRNA-1

Gene Sequence

>Msa0568440

ATGGACTACTATTTTGTAAACCCTCATGCTACTCCAAATTTTGCTCACTCTACTCATATGGTTCCTAATCCCTCTTCTGAGTTTATACTATCTGATTATCTTTTGCTTGATGATATTTGTATTGGTCACCTTGATCAAGAATCTCGGTCACAAAGTACCGAATCATTAGAGAAGGTAACATTCAATGATGCCAATCAAGAATTCAATGATGCAACCTCAAAGAACAATAATATAAAATACAAAAATGGGATTAAGCGAAATAAGGTAGAAGCGGGGCCAAAGATAGCCTTTAGAACAAGATCAGAGCTTGAGATTATGGATGATGGATACAAGTGGAGGAAGTACGGGAAGAAGTCTGTGAAGAACAGTCCTAACCTAAGGAACTACTACAAATGTTCAAGTGTGGGATGTAATGTGAAGAAAAGGGTGGAAAGGGATAGAGATGATTCGAGCTATGTGATAACAAGTTATGAAGGTGTGCATAACCATGAGATTCCATTTACCTCCCACTGCAGCCAAATCTCTTTTGTGCATTCTGATGAATATAATTAA

Protein sequence

>Msa0568440

MDYYFVNPHATPNFAHSTHMVPNPSSEFILSDYLLLDDICIGHLDQESRSQSTESLEKVTFNDANQEFNDATSKNNNIKYKNGIKRNKVEAGPKIAFRTRSELEIMDDGYKWRKYGKKSVKNSPNLRNYYKCSSVGCNVKKRVERDRDDSSYVITSYEGVHNHEIPFTSHCSQISFVHSDEYN*