Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084220 | XP_003591776.2 | 93.923 | 543 | 16 | 2 | 1 | 543 | 1 | 526 | 0.0 | 1049 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084220 | sp|B9RAJ0|DNPEP_RICCO | 52.778 | 504 | 200 | 5 | 58 | 542 | 6 | 490 | 0.0 | 560 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084220 | G7I369 | 93.923 | 543 | 16 | 2 | 1 | 543 | 1 | 526 | 0.0 | 1049 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0084220 | Msa0089210 | 0.804391 | 2.209171e-49 | -8.615850e-47 |
| Msa0084220 | Msa0162030 | 0.803802 | 2.928921e-49 | -8.615850e-47 |
| Msa0084220 | Msa0207000 | 0.801246 | 9.856565e-49 | -8.615850e-47 |
| Msa0084220 | Msa0214730 | 0.815692 | 8.115393e-52 | -8.615850e-47 |
| Msa0084220 | Msa0259980 | 0.805046 | 1.612623e-49 | -8.615850e-47 |
| Msa0084220 | Msa0304870 | 0.809858 | 1.536892e-50 | -8.615850e-47 |
| Msa0084220 | Msa0314790 | 0.817977 | 2.492932e-52 | -8.615850e-47 |
| Msa0084220 | Msa0339860 | 0.817149 | 3.831134e-52 | -8.615850e-47 |
| Msa0084220 | Msa0341260 | 0.810445 | 1.148537e-50 | -8.615850e-47 |
| Msa0084220 | Msa0466100 | 0.809427 | 1.902755e-50 | -8.615850e-47 |
| Msa0084220 | Msa0662860 | 0.805505 | 1.292187e-49 | -8.615850e-47 |
| Msa0084220 | Msa0709480 | 0.802984 | 4.327685e-49 | -8.615850e-47 |
| Msa0084220 | Msa0790830 | 0.817414 | 3.339266e-52 | -8.615850e-47 |
| Msa0084220 | Msa0812660 | 0.803367 | 3.606022e-49 | -8.615850e-47 |
| Msa0084220 | Msa1069450 | 0.820249 | 7.579505e-53 | -8.615850e-47 |
| Msa0084220 | Msa1097380 | 0.801405 | 9.145874e-49 | -8.615850e-47 |
| Msa0084220 | Msa1125780 | 0.801752 | 7.761755e-49 | -8.615850e-47 |
| Msa0084220 | Msa1125950 | 0.800912 | 1.153359e-48 | -8.615850e-47 |
| Msa0084220 | Msa1171340 | 0.809611 | 1.736670e-50 | -8.615850e-47 |
| Msa0084220 | Msa1183730 | 0.811948 | 5.423494e-51 | -8.615850e-47 |
| Msa0084220 | Msa1210640 | 0.807342 | 5.297462e-50 | -8.615850e-47 |
| Msa0084220 | Msa1220230 | 0.806114 | 9.625925e-50 | -8.615850e-47 |
| Msa0084220 | Msa1267860 | 0.800413 | 1.458282e-48 | -8.615850e-47 |
| Msa0084220 | Msa1299160 | 0.800737 | 1.252293e-48 | -8.615850e-47 |
| Msa0084220 | Msa1313460 | 0.804975 | 1.668463e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084220 | MtrunA17_Chr1g0198491 | 91.398 | 558 | 16 | 3 | 1 | 543 | 1 | 541 | 0.0 | 993 |
| Msa0084220 | MtrunA17_Chr3g0116281 | 53.550 | 493 | 195 | 6 | 64 | 542 | 9 | 481 | 0.0 | 550 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0084220 | AT5G04710.1 | 75.654 | 497 | 102 | 4 | 47 | 542 | 47 | 525 | 0.0 | 789 |
| Msa0084220 | AT5G60160.1 | 56.008 | 491 | 185 | 6 | 64 | 542 | 5 | 476 | 0.0 | 566 |
Find 138 sgRNAs with CRISPR-Local
Find 458 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGCTTATCTGCAAAATT+TGG | 0.136182 | 1_2:+63515862 | None:intergenic |
| AGAAGATGAGTCTCAAAATT+TGG | 0.216625 | 1_2:+63518687 | None:intergenic |
| TGGTGCACCCACCATGTTTC+AGG | 0.245589 | 1_2:-63516663 | Msa0084220:CDS |
| CGAATGAAGGATGATGAATT+TGG | 0.257196 | 1_2:+63521033 | None:intergenic |
| TTGCCTGAGTTGGAAGGTTT+TGG | 0.257427 | 1_2:+63515728 | None:intergenic |
| CATTAAAACGATTAGAATCT+TGG | 0.283821 | 1_2:-63514082 | Msa0084220:three_prime_UTR |
| AAGAGTAGGAATACGCAAAA+TGG | 0.284264 | 1_2:+63519505 | None:intergenic |
| GATAGGGATTTGAGTGTTGC+AGG | 0.304340 | 1_2:-63519590 | Msa0084220:CDS |
| CACTCGTAATATGTCTTGTT+TGG | 0.323205 | 1_2:-63520717 | Msa0084220:CDS |
| TCGATTATCTCAACGAATCT+TGG | 0.323561 | 1_2:-63520933 | Msa0084220:CDS |
| TCTAACAGTGTCTGCAGATA+TGG | 0.338378 | 1_2:-63515899 | Msa0084220:intron |
| TATGGCATACTTGGTTTGAT+AGG | 0.339877 | 1_2:-63519607 | Msa0084220:CDS |
| AGACTTATGGAGGTGGGTTA+TGG | 0.344088 | 1_2:-63519625 | Msa0084220:CDS |
| GCTTGCAACTATACGTCTTA+TGG | 0.358042 | 1_2:+63516640 | None:intergenic |
| TTGTGAATCTCCGGATGATT+TGG | 0.367388 | 1_2:-63517197 | Msa0084220:CDS |
| GAACTTTCTTCCCTAGCATT+TGG | 0.367591 | 1_2:-63514182 | Msa0084220:three_prime_UTR |
| CAATGGAAACGGATTGGGAT+TGG | 0.381883 | 1_2:+63520968 | None:intergenic |
| AATTTGGTTTGAAACCTTCC+TGG | 0.386938 | 1_2:+63518703 | None:intergenic |
| AGCAATTGATATTGTACAAT+GGG | 0.387021 | 1_2:-63517513 | Msa0084220:CDS |
| ATGGTAAATGTTCAGACTTA+TGG | 0.394816 | 1_2:-63519638 | Msa0084220:CDS |
| ATGATGAATTTGGGAGATTA+CGG | 0.401604 | 1_2:+63521043 | None:intergenic |
| GTGATGCAATACTAGTTAAC+AGG | 0.403989 | 1_2:-63521204 | Msa0084220:five_prime_UTR |
| TAGGTCCAATACTCGCTTCT+GGG | 0.407232 | 1_2:-63515161 | Msa0084220:CDS |
| TTTGTTCTTAATTTATTAGC+AGG | 0.410447 | 1_2:-63514054 | Msa0084220:three_prime_UTR |
| ATAGGTCCAATACTCGCTTC+TGG | 0.410477 | 1_2:-63515162 | Msa0084220:CDS |
| GTGGAACTAGAATAGGATAT+TGG | 0.413689 | 1_2:-63514264 | Msa0084220:three_prime_UTR |
| TGTTTGGTTGCTTTCGCCGT+TGG | 0.416471 | 1_2:-63520701 | Msa0084220:CDS |
| GTTAACAATGGAAACGGATT+GGG | 0.417308 | 1_2:+63520963 | None:intergenic |
| AATGGAAACGGATTGGGATT+GGG | 0.417947 | 1_2:+63520969 | None:intergenic |
| ATAGTTGTGTTTGCTGAGGA+AGG | 0.431764 | 1_2:-63514294 | Msa0084220:three_prime_UTR |
| GAATGAAGGATGATGAATTT+GGG | 0.440583 | 1_2:+63521034 | None:intergenic |
| TTTCTTCCCTAGCATTTGGT+TGG | 0.441117 | 1_2:-63514178 | Msa0084220:three_prime_UTR |
| TTCAAGTTATTGCGCATTGA+GGG | 0.445171 | 1_2:-63517233 | Msa0084220:CDS |
| GAGGTGGGTTATGGCATACT+TGG | 0.446649 | 1_2:-63519616 | Msa0084220:CDS |
| GAAGGCTTCTTCTTATATGA+TGG | 0.447361 | 1_2:-63519657 | Msa0084220:CDS |
| CCAATACTCGCTTCTGGGGT+TGG | 0.454012 | 1_2:-63515156 | Msa0084220:CDS |
| AAGACGTATAGTTGCAAGCT+TGG | 0.463174 | 1_2:-63516636 | Msa0084220:CDS |
| TCAGATTCTGCTCAAGGAGC+TGG | 0.464972 | 1_2:-63516683 | Msa0084220:CDS |
| CTACTCACTGTAGGAATTCG+TGG | 0.467627 | 1_2:-63515214 | Msa0084220:intron |
| CGTTAACAATGGAAACGGAT+TGG | 0.469284 | 1_2:+63520962 | None:intergenic |
| GGTGCTAGTGGAACTAGAAT+AGG | 0.471894 | 1_2:-63514271 | Msa0084220:three_prime_UTR |
| GGAAGAAAGTTCATTTGCTA+AGG | 0.472814 | 1_2:+63514193 | None:intergenic |
| ATGGCATACTTGGTTTGATA+GGG | 0.475833 | 1_2:-63519606 | Msa0084220:CDS |
| ACAAGTCCTTTCTGCAGCTC+TGG | 0.476527 | 1_2:+63515826 | None:intergenic |
| TGAAGGTACGATGTGGGTAA+TGG | 0.478279 | 1_2:-63519746 | Msa0084220:intron |
| ACTATACGCCAATCATTTCT+CGG | 0.479951 | 1_2:-63516578 | Msa0084220:intron |
| CTCTTGCCATTCATCTTGAC+CGG | 0.486089 | 1_2:-63519487 | Msa0084220:intron |
| GAAGACACGTCGTCGAATGA+AGG | 0.486801 | 1_2:+63521020 | None:intergenic |
| CAGTGGATGATGAGAAGCTT+TGG | 0.489869 | 1_2:+63518596 | None:intergenic |
| AGTAACGTCCACCTGGTTTG+AGG | 0.492439 | 1_2:+63520744 | None:intergenic |
| CAAAATTTGGATGAACTCCA+TGG | 0.496480 | 1_2:+63515875 | None:intergenic |
| TGTTGACTCTTGTGAATCTC+CGG | 0.497372 | 1_2:-63517206 | Msa0084220:CDS |
| AGATTACGGTAACGAAGAAA+TGG | 0.498312 | 1_2:+63521057 | None:intergenic |
| CCAACCCCAGAAGCGAGTAT+TGG | 0.498498 | 1_2:+63515156 | None:intergenic |
| AGAGTAGGAATACGCAAAAT+GGG | 0.505031 | 1_2:+63519506 | None:intergenic |
| GCATAATCCAACCAAATGCT+AGG | 0.505418 | 1_2:+63514171 | None:intergenic |
| CTTCAAGTTATTGCGCATTG+AGG | 0.506033 | 1_2:-63517234 | Msa0084220:CDS |
| ATGGTATACCGAGAAATGAT+TGG | 0.506590 | 1_2:+63516570 | None:intergenic |
| GATACTCAACCTAGCTGCCT+TGG | 0.507943 | 1_2:-63517304 | Msa0084220:CDS |
| TTGCTCAACTTTCAATGCAC+AGG | 0.508431 | 1_2:-63515110 | Msa0084220:intron |
| GCAGTATAAGAGAAATATGT+GGG | 0.509854 | 1_2:-63514436 | Msa0084220:intron |
| TTCTTAATGAAAATGAAGAA+TGG | 0.509917 | 1_2:-63520769 | Msa0084220:CDS |
| TATTGTACAATGGGCCATGC+TGG | 0.511001 | 1_2:-63517504 | Msa0084220:CDS |
| TACAATGGGCCATGCTGGAA+TGG | 0.512518 | 1_2:-63517499 | Msa0084220:CDS |
| TAGTTGTGTTTGCTGAGGAA+GGG | 0.514294 | 1_2:-63514293 | Msa0084220:three_prime_UTR |
| TGGCTAGCGAACAAGCGATT+CGG | 0.514344 | 1_2:-63517177 | Msa0084220:CDS |
| TAGAGAGGAATTGCCTGAGT+TGG | 0.517382 | 1_2:+63515718 | None:intergenic |
| TGGACTCATTTCCACGCCAC+AGG | 0.517508 | 1_2:-63520913 | Msa0084220:intron |
| AATGTATTAACAAATGCTCT+CGG | 0.518734 | 1_2:+63514101 | None:intergenic |
| TTCTGGGGTTGGCATCCGAA+CGG | 0.519284 | 1_2:-63515145 | Msa0084220:CDS |
| ACTCAACCTAGCTGCCTTGG+AGG | 0.522687 | 1_2:-63517301 | Msa0084220:CDS |
| AGAAGCGAGTATTGGACCTA+TGG | 0.522950 | 1_2:+63515164 | None:intergenic |
| AGTTGTGTTTGCTGAGGAAG+GGG | 0.524083 | 1_2:-63514292 | Msa0084220:three_prime_UTR |
| AAACGACAATTAATCGCAGC+TGG | 0.525194 | 1_2:-63520800 | Msa0084220:CDS |
| TCATCATCCACTGCTTATGC+AGG | 0.526925 | 1_2:-63518586 | Msa0084220:intron |
| CAATTCCACAGTCAACCGTT+CGG | 0.533344 | 1_2:+63515130 | None:intergenic |
| AATCCAAAACCTTCCAACTC+AGG | 0.535938 | 1_2:-63515731 | Msa0084220:intron |
| TTCCACTGGTAGCATAGCGC+TGG | 0.536045 | 1_2:+63515785 | None:intergenic |
| GTCCTTTCTGCAGCTCTGGT+CGG | 0.536358 | 1_2:+63515830 | None:intergenic |
| ATAGTACCGGTCAAGATGAA+TGG | 0.542404 | 1_2:+63519481 | None:intergenic |
| TTTGCACCTCCAAGGCAGCT+AGG | 0.544081 | 1_2:+63517295 | None:intergenic |
| AAGATCGTTAACAATGGAAA+CGG | 0.548215 | 1_2:+63520957 | None:intergenic |
| TTGAGATTGAGTTTGAGTGA+TGG | 0.549193 | 1_2:+63521090 | None:intergenic |
| TGCAGTATAAGAGAAATATG+TGG | 0.550194 | 1_2:-63514437 | Msa0084220:intron |
| GTGGGTTCAGATTCTGCTCA+AGG | 0.551999 | 1_2:-63516689 | Msa0084220:CDS |
| GTTAGAAATGACATGGGATG+CGG | 0.553592 | 1_2:-63515192 | Msa0084220:CDS |
| GCAAATAACTATGTTGGTGA+AGG | 0.554402 | 1_2:-63516614 | Msa0084220:CDS |
| AATGTTCAGACTTATGGAGG+TGG | 0.554687 | 1_2:-63519632 | Msa0084220:CDS |
| ATTGTTTAGCACAGTGAACC+AGG | 0.556386 | 1_2:-63518721 | Msa0084220:intron |
| TAACGAAGAAATGGTGATGA+TGG | 0.557854 | 1_2:+63521066 | None:intergenic |
| TCGAGTTTCATCGAGAGTAA+AGG | 0.562438 | 1_2:+63518663 | None:intergenic |
| TAGCAATTGATATTGTACAA+TGG | 0.565915 | 1_2:-63517514 | Msa0084220:CDS |
| GAGGAATTGCCTGAGTTGGA+AGG | 0.571426 | 1_2:+63515722 | None:intergenic |
| GCCGAAAACAGCGTCAGTGA+AGG | 0.571596 | 1_2:-63519675 | Msa0084220:CDS |
| TGTTCGCTAGCCAAATCATC+CGG | 0.572626 | 1_2:+63517187 | None:intergenic |
| AAGAAGAGATGTGATTCCAC+TGG | 0.575695 | 1_2:+63515771 | None:intergenic |
| CACCGACCAGAGCTGCAGAA+AGG | 0.578876 | 1_2:-63515832 | Msa0084220:CDS |
| ATGGGATGCGGATCAACCAT+AGG | 0.581725 | 1_2:-63515180 | Msa0084220:CDS |
| ATTCATTGTTTGCACCTCCA+AGG | 0.583178 | 1_2:+63517287 | None:intergenic |
| ACGTCTTATGGCCTGAAACA+TGG | 0.587160 | 1_2:+63516652 | None:intergenic |
| GGTTGCTCTGTTTGACAATG+AGG | 0.587175 | 1_2:-63517152 | Msa0084220:CDS |
| TTCGGCTTCAGTTTCAGACA+TGG | 0.589778 | 1_2:+63519692 | None:intergenic |
| TGTTGTTGAAGGTACGATGT+GGG | 0.589808 | 1_2:-63519752 | Msa0084220:intron |
| GTGAAGAAGTAACGTCCACC+TGG | 0.592016 | 1_2:+63520737 | None:intergenic |
| ATGTTCAGACTTATGGAGGT+GGG | 0.592042 | 1_2:-63519631 | Msa0084220:CDS |
| ATTCGTGGTTAGAAATGACA+TGG | 0.593807 | 1_2:-63515199 | Msa0084220:CDS |
| GTGTCTGCAGATATGGCCCA+TGG | 0.599082 | 1_2:-63515892 | Msa0084220:CDS |
| TGCAATACTAGTTAACAGGT+TGG | 0.599395 | 1_2:-63521200 | Msa0084220:five_prime_UTR |
| TGCTGAGGAAGGGGTGCTAG+TGG | 0.599992 | 1_2:-63514283 | Msa0084220:three_prime_UTR |
| CATAATCCAACCAAATGCTA+GGG | 0.600259 | 1_2:+63514172 | None:intergenic |
| CTTTCTGCAGCTCTGGTCGG+TGG | 0.600372 | 1_2:+63515833 | None:intergenic |
| TCAAGATGAATGGCAAGAGT+AGG | 0.611001 | 1_2:+63519491 | None:intergenic |
| TTTAGCACAGTGAACCAGGA+AGG | 0.619667 | 1_2:-63518717 | Msa0084220:intron |
| ATCGAGAAGATCGTTAACAA+TGG | 0.623163 | 1_2:+63520951 | None:intergenic |
| AAAATTTGGATGAACTCCAT+GGG | 0.626689 | 1_2:+63515876 | None:intergenic |
| AGCTTGGCAAATAACTATGT+TGG | 0.628527 | 1_2:-63516620 | Msa0084220:CDS |
| TTGTTGTTGAAGGTACGATG+TGG | 0.636225 | 1_2:-63519753 | Msa0084220:intron |
| AGGTCCAATACTCGCTTCTG+GGG | 0.638373 | 1_2:-63515160 | Msa0084220:CDS |
| AACCAGCGCTATGCTACCAG+TGG | 0.640942 | 1_2:-63515787 | Msa0084220:CDS |
| TGTACAATTCCATTCCAGCA+TGG | 0.642841 | 1_2:+63517490 | None:intergenic |
| GTAAATGTTCAGACTTATGG+AGG | 0.649065 | 1_2:-63519635 | Msa0084220:CDS |
| CATAGACAAGATGCTGACTG+TGG | 0.652971 | 1_2:-63514354 | Msa0084220:CDS |
| TAGCGAACAAGCGATTCGGA+TGG | 0.653246 | 1_2:-63517173 | Msa0084220:CDS |
| GGCATCCGAACGGTTGACTG+TGG | 0.654138 | 1_2:-63515135 | Msa0084220:CDS |
| TGCTCTGTTTGACAATGAGG+AGG | 0.654956 | 1_2:-63517149 | Msa0084220:intron |
| GAAGAATGGAACCTCAAACC+AGG | 0.655104 | 1_2:-63520755 | Msa0084220:CDS |
| TAAGAACTCAGCTAGAAACA+TGG | 0.659922 | 1_2:-63521160 | Msa0084220:exon |
| ATACGTACCTGCATAAGCAG+TGG | 0.663270 | 1_2:+63518579 | None:intergenic |
| TGCTCTCGGAGCAAATAGAG+AGG | 0.675399 | 1_2:+63514115 | None:intergenic |
| GAATGAAGGTACCTGTGGCG+TGG | 0.675955 | 1_2:+63520902 | None:intergenic |
| TTTACTCTCGATGAAACTCG+AGG | 0.679371 | 1_2:-63518661 | Msa0084220:CDS |
| GAATGAAGAAGAAGAATGTG+TGG | 0.689122 | 1_2:+63521120 | None:intergenic |
| TCTTATAGTTGTGTTTGCTG+AGG | 0.690799 | 1_2:-63514298 | Msa0084220:three_prime_UTR |
| CTTATGGCCTGAAACATGGT+GGG | 0.691940 | 1_2:+63516656 | None:intergenic |
| TTCGTGGTTAGAAATGACAT+GGG | 0.700502 | 1_2:-63515198 | Msa0084220:CDS |
| GAATGGAACCTCAAACCAGG+TGG | 0.708230 | 1_2:-63520752 | Msa0084220:CDS |
| TCTTATGGCCTGAAACATGG+TGG | 0.711165 | 1_2:+63516655 | None:intergenic |
| TAACTAGTATTGCATCACCG+TGG | 0.758626 | 1_2:+63521209 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAATAAAAAATAAAAT+TGG | + | chr1_2:63519060-63519079 | None:intergenic | 0.0% |
| !! | ATAAGATATTTGTAAAAAAA+AGG | + | chr1_2:63515998-63516017 | None:intergenic | 10.0% |
| !!! | TTTTAAAAAAATTATTGGTA+AGG | + | chr1_2:63516734-63516753 | None:intergenic | 10.0% |
| !!! | ATTATTTTGGAAATTTTAAA+AGG | - | chr1_2:63517236-63517255 | Msa0084220:CDS | 10.0% |
| !! | TATGCTATATATAAAAAAAT+AGG | + | chr1_2:63519973-63519992 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTTGTATC+CGG | - | chr1_2:63520322-63520341 | Msa0084220:intron | 10.0% |
| !! | TAATTTGACTATAAATAATC+AGG | + | chr1_2:63514774-63514793 | None:intergenic | 15.0% |
| !! | TAGCAATTTCAATTTATATT+TGG | + | chr1_2:63516887-63516906 | None:intergenic | 15.0% |
| !! | ATTCGATTATTAAATTGTAA+TGG | + | chr1_2:63517343-63517362 | None:intergenic | 15.0% |
| !! | AATTTAATAATCGAATGAAT+TGG | - | chr1_2:63517347-63517366 | Msa0084220:CDS | 15.0% |
| !! | TAAATATTCATTCATAGAAA+AGG | - | chr1_2:63517424-63517443 | Msa0084220:intron | 15.0% |
| !!! | AATTTTTGTAAAGCAATTAA+AGG | - | chr1_2:63517513-63517532 | Msa0084220:CDS | 15.0% |
| !! | AATATCCAAAATAATAAACA+CGG | + | chr1_2:63517664-63517683 | None:intergenic | 15.0% |
| !!! | AACAATGAATTTATTTTTTC+TGG | - | chr1_2:63517966-63517985 | Msa0084220:intron | 15.0% |
| !!! | CTATGATTTTTTTTCTTTTA+GGG | + | chr1_2:63518370-63518389 | None:intergenic | 15.0% |
| !! | ATAAATAGGATATATCATAA+AGG | + | chr1_2:63518444-63518463 | None:intergenic | 15.0% |
| !! | ATTTGTCATAAATTTATAAG+AGG | + | chr1_2:63518696-63518715 | None:intergenic | 15.0% |
| !!! | ATAAAAAAATAGGAGATTTT+GGG | + | chr1_2:63519963-63519982 | None:intergenic | 15.0% |
| !!! | TATAAAAAAATAGGAGATTT+TGG | + | chr1_2:63519964-63519983 | None:intergenic | 15.0% |
| !! | TATATAGCATAGATTTATTA+AGG | - | chr1_2:63519982-63520001 | Msa0084220:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGTATCC+GGG | - | chr1_2:63520323-63520342 | Msa0084220:intron | 15.0% |
| !!! | TGAAAATTGATATTTTTTTC+TGG | + | chr1_2:63520357-63520376 | None:intergenic | 15.0% |
| !!! | ATCAATTTTCAATATTTATG+AGG | - | chr1_2:63520366-63520385 | Msa0084220:intron | 15.0% |
| !! | AATATGTAGAATAATAGCAA+TGG | + | chr1_2:63514363-63514382 | None:intergenic | 20.0% |
| !!! | ATTCTTCATTTTCATTAAGA+AGG | + | chr1_2:63514472-63514491 | None:intergenic | 20.0% |
| !! | TTCTTAATGAAAATGAAGAA+TGG | - | chr1_2:63514471-63514490 | Msa0084220:intron | 20.0% |
| !! | TACTTGTAAAAACTAATATC+AGG | + | chr1_2:63514637-63514656 | None:intergenic | 20.0% |
| !! | TCAAAATTATATCACTTACT+AGG | - | chr1_2:63514797-63514816 | Msa0084220:intron | 20.0% |
| !!! | CTAATTTGCTTATGAAATTT+AGG | - | chr1_2:63515120-63515139 | Msa0084220:CDS | 20.0% |
| !! | TAATGTTAGAAATTAATGGA+AGG | - | chr1_2:63515310-63515329 | Msa0084220:intron | 20.0% |
| !!! | TTGTTTTCATAAGCTTTTTT+TGG | + | chr1_2:63515970-63515989 | None:intergenic | 20.0% |
| !! | ATTCATCAAACTAAACATTA+TGG | - | chr1_2:63516106-63516125 | Msa0084220:intron | 20.0% |
| !! | AGTTAATTATAAGCAAATAC+CGG | - | chr1_2:63516349-63516368 | Msa0084220:intron | 20.0% |
| !!! | CATGTAGAACATTATTATTT+TGG | - | chr1_2:63517223-63517242 | Msa0084220:CDS | 20.0% |
| !! | AGGAATACAAAATATGTATA+AGG | + | chr1_2:63517316-63517335 | None:intergenic | 20.0% |
| !!! | TAGATAAATAATGGAAAAAG+AGG | - | chr1_2:63517551-63517570 | Msa0084220:intron | 20.0% |
| !!! | GTGTTTATTATTTTGGATAT+TGG | - | chr1_2:63517663-63517682 | Msa0084220:intron | 20.0% |
| !! | TATCTGAAAATTAAACACAA+GGG | + | chr1_2:63517856-63517875 | None:intergenic | 20.0% |
| !! | ATATCTGAAAATTAAACACA+AGG | + | chr1_2:63517857-63517876 | None:intergenic | 20.0% |
| !!! | GCTATGATTTTTTTTCTTTT+AGG | + | chr1_2:63518371-63518390 | None:intergenic | 20.0% |
| !! | AAAAAAATCATAGCAATCAT+CGG | - | chr1_2:63518377-63518396 | Msa0084220:intron | 20.0% |
| !!! | AAATTATGGATTAGTTAAAG+AGG | - | chr1_2:63518834-63518853 | Msa0084220:intron | 20.0% |
| !!! | AATTATGGATTAGTTAAAGA+GGG | - | chr1_2:63518835-63518854 | Msa0084220:intron | 20.0% |
| !! | TCAGTACTTAAATCTTATTA+AGG | - | chr1_2:63518930-63518949 | Msa0084220:intron | 20.0% |
| !! | CAGTACTTAAATCTTATTAA+GGG | - | chr1_2:63518931-63518950 | Msa0084220:intron | 20.0% |
| !! | AGTACTTAAATCTTATTAAG+GGG | - | chr1_2:63518932-63518951 | Msa0084220:intron | 20.0% |
| !!! | TTATACATGAATTTGTTTCA+GGG | - | chr1_2:63519101-63519120 | Msa0084220:intron | 20.0% |
| !! | GAATACAAAAGTTAATTTAG+TGG | + | chr1_2:63519317-63519336 | None:intergenic | 20.0% |
| !!! | AAAGATAAACATGATTTGTT+GGG | + | chr1_2:63519816-63519835 | None:intergenic | 20.0% |
| !!! | AAAAGATAAACATGATTTGT+TGG | + | chr1_2:63519817-63519836 | None:intergenic | 20.0% |
| !! | TATTATATTTGCCATATTGT+TGG | + | chr1_2:63519849-63519868 | None:intergenic | 20.0% |
| !!! | CTATAGTAATGTTTTTTTGT+TGG | + | chr1_2:63519897-63519916 | None:intergenic | 20.0% |
| !! | CAACAAAAAAACATTACTAT+AGG | - | chr1_2:63519895-63519914 | Msa0084220:intron | 20.0% |
| !!! | TAAAGGTTTTGATAAGTTAT+TGG | + | chr1_2:63520194-63520213 | None:intergenic | 20.0% |
| !! | TTTGTTCTTAATTTATTAGC+AGG | - | chr1_2:63521186-63521205 | Msa0084220:five_prime_UTR | 20.0% |
| ! | AGTTAAGTGATATAACTCAT+TGG | + | chr1_2:63514853-63514872 | None:intergenic | 25.0% |
| !!! | TTTTAACTTTACCGAATATG+TGG | - | chr1_2:63515056-63515075 | Msa0084220:intron | 25.0% |
| ! | TTTGCTTATGAAATTTAGGT+TGG | - | chr1_2:63515124-63515143 | Msa0084220:CDS | 25.0% |
| !! | TTGCTTATGAAATTTAGGTT+GGG | - | chr1_2:63515125-63515144 | Msa0084220:CDS | 25.0% |
| ! | GTTGCAATTATAATTGTACA+TGG | + | chr1_2:63515172-63515191 | None:intergenic | 25.0% |
| ! | ACATCAATGTTAGTTCATTA+AGG | + | chr1_2:63515236-63515255 | None:intergenic | 25.0% |
| ! | TTAATGAACTAACATTGATG+TGG | - | chr1_2:63515235-63515254 | Msa0084220:intron | 25.0% |
| ! | CCATTAATTTCTAACATTAG+AGG | + | chr1_2:63515309-63515328 | None:intergenic | 25.0% |
| ! | CCTCTAATGTTAGAAATTAA+TGG | - | chr1_2:63515306-63515325 | Msa0084220:intron | 25.0% |
| ! | TTGTAATATACCGTTCAAAA+TGG | + | chr1_2:63515337-63515356 | None:intergenic | 25.0% |
| !! | TGAACGGTATATTACAATTT+TGG | - | chr1_2:63515340-63515359 | Msa0084220:intron | 25.0% |
| !! | GAACGGTATATTACAATTTT+GGG | - | chr1_2:63515341-63515360 | Msa0084220:intron | 25.0% |
| !! | AACGGTATATTACAATTTTG+GGG | - | chr1_2:63515342-63515361 | Msa0084220:intron | 25.0% |
| !! | TTGTTATTATTATCTGCTGA+TGG | - | chr1_2:63515438-63515457 | Msa0084220:intron | 25.0% |
| ! | TCTATTAAAATAAGCACTTG+TGG | - | chr1_2:63515874-63515893 | Msa0084220:CDS | 25.0% |
| ! | GATGATAGTTAGTTAGTATT+AGG | + | chr1_2:63516073-63516092 | None:intergenic | 25.0% |
| ! | ACAATGAAACAAATATGAGA+CGG | + | chr1_2:63516504-63516523 | None:intergenic | 25.0% |
| !! | AAAATCACAGAATTTTCCAT+GGG | + | chr1_2:63517270-63517289 | None:intergenic | 25.0% |
| !!! | TATTAAATTGTAATGGACTG+AGG | + | chr1_2:63517336-63517355 | None:intergenic | 25.0% |
| ! | AGTCAAATAAGTTTATCTCT+TGG | - | chr1_2:63517698-63517717 | Msa0084220:intron | 25.0% |
| ! | TAGCAATTGATATTGTACAA+TGG | - | chr1_2:63517726-63517745 | Msa0084220:intron | 25.0% |
| ! | AGCAATTGATATTGTACAAT+GGG | - | chr1_2:63517727-63517746 | Msa0084220:intron | 25.0% |
| ! | TTGCTTATCATTCTTTACAA+CGG | - | chr1_2:63517830-63517849 | Msa0084220:intron | 25.0% |
| !! | TAATTTTCAGATATTGTCAG+AGG | - | chr1_2:63517863-63517882 | Msa0084220:intron | 25.0% |
| ! | GATATATCCTATTTATGAGT+TGG | - | chr1_2:63518448-63518467 | Msa0084220:intron | 25.0% |
| ! | CATTATACCAACTCATAAAT+AGG | + | chr1_2:63518458-63518477 | None:intergenic | 25.0% |
| ! | GTCATAAATTTATAAGAGGA+TGG | + | chr1_2:63518692-63518711 | None:intergenic | 25.0% |
| !!! | AGATTTAAGTACTGAACAAA+TGG | + | chr1_2:63518925-63518944 | None:intergenic | 25.0% |
| ! | TTCTGTTTACTAGATCTATT+GGG | - | chr1_2:63519007-63519026 | Msa0084220:intron | 25.0% |
| !! | CTTATACATGAATTTGTTTC+AGG | - | chr1_2:63519100-63519119 | Msa0084220:intron | 25.0% |
| ! | ATATTACAGGACGAAATTAT+CGG | + | chr1_2:63519141-63519160 | None:intergenic | 25.0% |
| !!! | TCTCTTCTTTTTAAAGAAGT+TGG | - | chr1_2:63519483-63519502 | Msa0084220:intron | 25.0% |
| !!! | CTCTTCTTTTTAAAGAAGTT+GGG | - | chr1_2:63519484-63519503 | Msa0084220:intron | 25.0% |
| ! | CAAAATGAGAAATAATAGAG+AGG | + | chr1_2:63519540-63519559 | None:intergenic | 25.0% |
| !! | TCTATTGCTAGAGATTATTT+TGG | + | chr1_2:63519659-63519678 | None:intergenic | 25.0% |
| ! | ATACTAGCAAATATTCTGAA+TGG | - | chr1_2:63519719-63519738 | Msa0084220:CDS | 25.0% |
| !! | GGTTACAATTTATACCTTTT+CGG | + | chr1_2:63520247-63520266 | None:intergenic | 25.0% |
| ! | TAAGACAGAGAAGAAATTAA+GGG | + | chr1_2:63520643-63520662 | None:intergenic | 25.0% |
| ! | ATAAGACAGAGAAGAAATTA+AGG | + | chr1_2:63520644-63520663 | None:intergenic | 25.0% |
| !! | AGAAAAAACCATTCTGAAAA+AGG | - | chr1_2:63520695-63520714 | Msa0084220:CDS | 25.0% |
| !!! | TAACAATTCCTTTTTCAGAA+TGG | + | chr1_2:63520706-63520725 | None:intergenic | 25.0% |
| ! | GACAATCTATATAATATCCT+TGG | + | chr1_2:63520762-63520781 | None:intergenic | 25.0% |
| ! | AATGTATTAACAAATGCTCT+CGG | + | chr1_2:63521142-63521161 | None:intergenic | 25.0% |
| ! | CATTAAAACGATTAGAATCT+TGG | - | chr1_2:63521158-63521177 | Msa0084220:exon | 25.0% |
| ATGATGAATTTGGGAGATTA+CGG | + | chr1_2:63514200-63514219 | None:intergenic | 30.0% | |
| GAATGAAGGATGATGAATTT+GGG | + | chr1_2:63514209-63514228 | None:intergenic | 30.0% | |
| AAGATCGTTAACAATGGAAA+CGG | + | chr1_2:63514286-63514305 | None:intergenic | 30.0% | |
| GAATAATAGCAATGGAATGA+AGG | + | chr1_2:63514355-63514374 | None:intergenic | 30.0% | |
| ACAGTAAGCGATATAATTCA+AGG | + | chr1_2:63514886-63514905 | None:intergenic | 30.0% | |
| CATTTACACCCTTGTAATTT+GGG | + | chr1_2:63514987-63515006 | None:intergenic | 30.0% | |
| ACATCAATGCTACCATATTT+GGG | - | chr1_2:63515096-63515115 | Msa0084220:intron | 30.0% | |
| AAGCAAATTAGTCCCAAATA+TGG | + | chr1_2:63515111-63515130 | None:intergenic | 30.0% | |
| ! | ATTGTACATGGACTAATTAC+TGG | + | chr1_2:63515160-63515179 | None:intergenic | 30.0% |
| ! | CTGATTTGCCTTAGAAATTT+AGG | + | chr1_2:63515212-63515231 | None:intergenic | 30.0% |
| ATGGTAAATGTTCAGACTTA+TGG | - | chr1_2:63515602-63515621 | Msa0084220:intron | 30.0% | |
| ATGAATGTGAGTTATAGTAC+CGG | + | chr1_2:63515775-63515794 | None:intergenic | 30.0% | |
| TTCAATTACAACTCCTACTT+AGG | - | chr1_2:63515823-63515842 | Msa0084220:CDS | 30.0% | |
| CTAACAATAAAAACAGGCTA+TGG | + | chr1_2:63515943-63515962 | None:intergenic | 30.0% | |
| AGTTAGTATTAGGTCATGTT+TGG | + | chr1_2:63516063-63516082 | None:intergenic | 30.0% | |
| ACATGCATTACAAATCATAG+GGG | + | chr1_2:63516208-63516227 | None:intergenic | 30.0% | |
| CACATGCATTACAAATCATA+GGG | + | chr1_2:63516209-63516228 | None:intergenic | 30.0% | |
| ACACATGCATTACAAATCAT+AGG | + | chr1_2:63516210-63516229 | None:intergenic | 30.0% | |
| GATGAATAAATCAGTGGTTA+AGG | + | chr1_2:63516248-63516267 | None:intergenic | 30.0% | |
| !! | ACCACTGATTTATTCATCAA+TGG | - | chr1_2:63516250-63516269 | Msa0084220:intron | 30.0% |
| ACCATTGATGAATAAATCAG+TGG | + | chr1_2:63516254-63516273 | None:intergenic | 30.0% | |
| ! | AAGGATAGAACAAAGTTTTC+CGG | + | chr1_2:63516371-63516390 | None:intergenic | 30.0% |
| AAAACTTTGTTCTATCCTTG+AGG | - | chr1_2:63516372-63516391 | Msa0084220:intron | 30.0% | |
| AAACTTTGTTCTATCCTTGA+GGG | - | chr1_2:63516373-63516392 | Msa0084220:intron | 30.0% | |
| AGAAGATGAGTCTCAAAATT+TGG | + | chr1_2:63516556-63516575 | None:intergenic | 30.0% | |
| CTTAAACTCAAGTCAAAAGA+AGG | + | chr1_2:63516694-63516713 | None:intergenic | 30.0% | |
| AATTATTGGTAAGGTATGCA+TGG | + | chr1_2:63516725-63516744 | None:intergenic | 30.0% | |
| AAGAAATCGATAGTTGTAGA+TGG | + | chr1_2:63516785-63516804 | None:intergenic | 30.0% | |
| TTCTATCTTCTACTGAATCT+AGG | + | chr1_2:63516839-63516858 | None:intergenic | 30.0% | |
| GCTATATACTATAGTTCCTT+AGG | - | chr1_2:63516903-63516922 | Msa0084220:intron | 30.0% | |
| !!! | TAGTTGGTTTTCCTATTCTT+CGG | - | chr1_2:63517023-63517042 | Msa0084220:intron | 30.0% |
| ! | GAAAATCACAGAATTTTCCA+TGG | + | chr1_2:63517271-63517290 | None:intergenic | 30.0% |
| ! | GATTTTCTTAACCAATGTCT+TGG | - | chr1_2:63517284-63517303 | Msa0084220:CDS | 30.0% |
| TAAGGAAAATACCAAGACAT+TGG | + | chr1_2:63517298-63517317 | None:intergenic | 30.0% | |
| ATATTCGCATGCATTTCAAT+AGG | + | chr1_2:63517388-63517407 | None:intergenic | 30.0% | |
| GCAGAGTAGTAGATAAATAA+TGG | - | chr1_2:63517542-63517561 | Msa0084220:intron | 30.0% | |
| TGAATTCAAGTGTCATCATT+GGG | + | chr1_2:63517638-63517657 | None:intergenic | 30.0% | |
| ATGAATTCAAGTGTCATCAT+TGG | + | chr1_2:63517639-63517658 | None:intergenic | 30.0% | |
| ! | CATAGCCGTGTTTATTATTT+TGG | - | chr1_2:63517656-63517675 | Msa0084220:intron | 30.0% |
| ! | TCTTTTGCACACTTAAGTAT+CGG | - | chr1_2:63518154-63518173 | Msa0084220:intron | 30.0% |
| TTTCCATCAGTTTGAAAGAA+CGG | + | chr1_2:63518316-63518335 | None:intergenic | 30.0% | |
| TGCGTGTAATTCCAATATTA+AGG | - | chr1_2:63518740-63518759 | Msa0084220:intron | 30.0% | |
| GCGTGTAATTCCAATATTAA+GGG | - | chr1_2:63518741-63518760 | Msa0084220:intron | 30.0% | |
| TTGCAATCAACCCTTAATAT+TGG | + | chr1_2:63518754-63518773 | None:intergenic | 30.0% | |
| TAGCTATGCTCTATAATAGA+AGG | + | chr1_2:63518791-63518810 | None:intergenic | 30.0% | |
| TCCTAAGAAAGCTCAAATTA+TGG | - | chr1_2:63518820-63518839 | Msa0084220:intron | 30.0% | |
| TCCATAATTTGAGCTTTCTT+AGG | + | chr1_2:63518824-63518843 | None:intergenic | 30.0% | |
| ATGGCTGAAATTGATAAAAG+AGG | - | chr1_2:63518874-63518893 | Msa0084220:intron | 30.0% | |
| CAGAAACAGAATAAATGCTA+GGG | + | chr1_2:63518980-63518999 | None:intergenic | 30.0% | |
| CTTCTGTTTACTAGATCTAT+TGG | - | chr1_2:63519006-63519025 | Msa0084220:intron | 30.0% | |
| GATAATTTCGTCCTGTAATA+TGG | - | chr1_2:63519140-63519159 | Msa0084220:intron | 30.0% | |
| ! | TGATAAAAGAGCACATTCAA+TGG | - | chr1_2:63519207-63519226 | Msa0084220:intron | 30.0% |
| AAAATTTGGATGAACTCCAT+GGG | + | chr1_2:63519367-63519386 | None:intergenic | 30.0% | |
| TCATGCTTATCTGCAAAATT+TGG | + | chr1_2:63519381-63519400 | None:intergenic | 30.0% | |
| TTTCAATGTCACCAACAATA+TGG | - | chr1_2:63519835-63519854 | Msa0084220:intron | 30.0% | |
| !! | AAAAATAGGAGATTTTGGGT+TGG | + | chr1_2:63519959-63519978 | None:intergenic | 30.0% |
| ! | ATATTTTGTCTACTCACTGT+AGG | - | chr1_2:63520017-63520036 | Msa0084220:intron | 30.0% |
| CATATGACAAGGTTTCATAA+AGG | + | chr1_2:63520211-63520230 | None:intergenic | 30.0% | |
| GTATAAATTGTAACCATGTC+TGG | - | chr1_2:63520252-63520271 | Msa0084220:intron | 30.0% | |
| !! | TGAGGTTTGACTTAATCTTT+TGG | - | chr1_2:63520384-63520403 | Msa0084220:intron | 30.0% |
| !!! | TGACTTAATCTTTTGGAATC+AGG | - | chr1_2:63520391-63520410 | Msa0084220:intron | 30.0% |
| !!! | AATCTTTTGGAATCAGGTAT+TGG | - | chr1_2:63520397-63520416 | Msa0084220:intron | 30.0% |
| GTAAGGCAACAAATATTGAA+TGG | + | chr1_2:63520499-63520518 | None:intergenic | 30.0% | |
| ! | AATATTTGTTGCCTTACTCT+TGG | - | chr1_2:63520502-63520521 | Msa0084220:intron | 30.0% |
| CATATATAATATTAGCCGAG+CGG | + | chr1_2:63520616-63520635 | None:intergenic | 30.0% | |
| AAGACAGAGAAGAAATTAAG+GGG | + | chr1_2:63520642-63520661 | None:intergenic | 30.0% | |
| ! | CTATATAATATCCTTGGTGT+AGG | + | chr1_2:63520756-63520775 | None:intergenic | 30.0% |
| TGCAGTATAAGAGAAATATG+TGG | - | chr1_2:63520803-63520822 | Msa0084220:CDS | 30.0% | |
| GCAGTATAAGAGAAATATGT+GGG | - | chr1_2:63520804-63520823 | Msa0084220:CDS | 30.0% | |
| !! | TTTTAGGAGAACTTTGTTCT+CGG | + | chr1_2:63521027-63521046 | None:intergenic | 30.0% |
| !! | AGTTCATTTGCTAAGGTTTT+AGG | + | chr1_2:63521043-63521062 | None:intergenic | 30.0% |
| GTGATGCAATACTAGTTAAC+AGG | - | chr1_2:63514036-63514055 | Msa0084220:three_prime_UTR | 35.0% | |
| TGCAATACTAGTTAACAGGT+TGG | - | chr1_2:63514040-63514059 | Msa0084220:three_prime_UTR | 35.0% | |
| TAAGAACTCAGCTAGAAACA+TGG | - | chr1_2:63514080-63514099 | Msa0084220:three_prime_UTR | 35.0% | |
| GAATGAAGAAGAAGAATGTG+TGG | + | chr1_2:63514123-63514142 | None:intergenic | 35.0% | |
| TTGAGATTGAGTTTGAGTGA+TGG | + | chr1_2:63514153-63514172 | None:intergenic | 35.0% | |
| ! | TAACGAAGAAATGGTGATGA+TGG | + | chr1_2:63514177-63514196 | None:intergenic | 35.0% |
| AGATTACGGTAACGAAGAAA+TGG | + | chr1_2:63514186-63514205 | None:intergenic | 35.0% | |
| CGAATGAAGGATGATGAATT+TGG | + | chr1_2:63514210-63514229 | None:intergenic | 35.0% | |
| !! | TTTTGAAGATGTGGAATTGG+TGG | + | chr1_2:63514250-63514269 | None:intergenic | 35.0% |
| !! | GGATTTTGAAGATGTGGAAT+TGG | + | chr1_2:63514253-63514272 | None:intergenic | 35.0% |
| ! | GTTAACAATGGAAACGGATT+GGG | + | chr1_2:63514280-63514299 | None:intergenic | 35.0% |
| ATCGAGAAGATCGTTAACAA+TGG | + | chr1_2:63514292-63514311 | None:intergenic | 35.0% | |
| TCGATTATCTCAACGAATCT+TGG | - | chr1_2:63514307-63514326 | Msa0084220:three_prime_UTR | 35.0% | |
| ! | TTCAGAAGGAAGGGTATAAA+TGG | + | chr1_2:63514386-63514405 | None:intergenic | 35.0% |
| !! | AAGGTTAGTTTCAGAAGGAA+GGG | + | chr1_2:63514395-63514414 | None:intergenic | 35.0% |
| !! | AAAGGTTAGTTTCAGAAGGA+AGG | + | chr1_2:63514396-63514415 | None:intergenic | 35.0% |
| ! | CACTCGTAATATGTCTTGTT+TGG | - | chr1_2:63514523-63514542 | Msa0084220:intron | 35.0% |
| !! | TGAAACTCACTTTTGTCCAA+CGG | + | chr1_2:63514558-63514577 | None:intergenic | 35.0% |
| ATCAGTTGAGCTAGAATTTG+TGG | - | chr1_2:63514594-63514613 | Msa0084220:intron | 35.0% | |
| CTCGACATAATTCAAAATCG+TGG | + | chr1_2:63514721-63514740 | None:intergenic | 35.0% | |
| ! | TTCTACTAACTTGTAAGGAC+AGG | + | chr1_2:63514913-63514932 | None:intergenic | 35.0% |
| TGTCCTTACAAGTTAGTAGA+AGG | - | chr1_2:63514912-63514931 | Msa0084220:intron | 35.0% | |
| TTAGTAGAAGGACCAAGTTA+TGG | - | chr1_2:63514924-63514943 | Msa0084220:intron | 35.0% | |
| TAGTAGAAGGACCAAGTTAT+GGG | - | chr1_2:63514925-63514944 | Msa0084220:intron | 35.0% | |
| TTGCCTATTCCCAAATTACA+AGG | - | chr1_2:63514975-63514994 | Msa0084220:intron | 35.0% | |
| TGCCTATTCCCAAATTACAA+GGG | - | chr1_2:63514976-63514995 | Msa0084220:intron | 35.0% | |
| GCATTTACACCCTTGTAATT+TGG | + | chr1_2:63514988-63515007 | None:intergenic | 35.0% | |
| TATGTAGAGGACCACATATT+CGG | + | chr1_2:63515070-63515089 | None:intergenic | 35.0% | |
| TTGATGTGGAATCTATGTAG+AGG | + | chr1_2:63515083-63515102 | None:intergenic | 35.0% | |
| !! | CAAATATGGTAGCATTGATG+TGG | + | chr1_2:63515097-63515116 | None:intergenic | 35.0% |
| CACATCAATGCTACCATATT+TGG | - | chr1_2:63515095-63515114 | Msa0084220:intron | 35.0% | |
| CTTAGAAATTTAGGTCATCG+GGG | + | chr1_2:63515203-63515222 | None:intergenic | 35.0% | |
| CCTTAGAAATTTAGGTCATC+GGG | + | chr1_2:63515204-63515223 | None:intergenic | 35.0% | |
| GCCTTAGAAATTTAGGTCAT+CGG | + | chr1_2:63515205-63515224 | None:intergenic | 35.0% | |
| ! | AATGGAAGGACCATTTTGAA+CGG | - | chr1_2:63515324-63515343 | Msa0084220:intron | 35.0% |
| CAAGAGTGAATAAGCATAAC+TGG | + | chr1_2:63515421-63515440 | None:intergenic | 35.0% | |
| !! | TTATTATCTGCTGATGGACT+TGG | - | chr1_2:63515444-63515463 | Msa0084220:intron | 35.0% |
| !! | TGCTTTGTTGTTGTTGTTGA+AGG | - | chr1_2:63515477-63515496 | Msa0084220:intron | 35.0% |
| GAAGGCTTCTTCTTATATGA+TGG | - | chr1_2:63515583-63515602 | Msa0084220:intron | 35.0% | |
| GTAAATGTTCAGACTTATGG+AGG | - | chr1_2:63515605-63515624 | Msa0084220:intron | 35.0% | |
| ! | TATGGCATACTTGGTTTGAT+AGG | - | chr1_2:63515633-63515652 | Msa0084220:intron | 35.0% |
| ! | ATGGCATACTTGGTTTGATA+GGG | - | chr1_2:63515634-63515653 | Msa0084220:intron | 35.0% |
| AGAGTAGGAATACGCAAAAT+GGG | + | chr1_2:63515737-63515756 | None:intergenic | 35.0% | |
| AAGAGTAGGAATACGCAAAA+TGG | + | chr1_2:63515738-63515757 | None:intergenic | 35.0% | |
| GGAGAGCTAACAATAAAAAC+AGG | + | chr1_2:63515949-63515968 | None:intergenic | 35.0% | |
| CTAAACATTATGGTTCAGTG+AGG | - | chr1_2:63516116-63516135 | Msa0084220:intron | 35.0% | |
| AATCAGTGGTTAAGGACTTA+AGG | + | chr1_2:63516240-63516259 | None:intergenic | 35.0% | |
| TGGTTAATCACTTACTTCAG+AGG | - | chr1_2:63516270-63516289 | Msa0084220:intron | 35.0% | |
| !! | AATTTGGTTTGAAACCTTCC+TGG | + | chr1_2:63516540-63516559 | None:intergenic | 35.0% |
| !! | AGTCTTCTCTTTTAACTCTG+AGG | + | chr1_2:63516611-63516630 | None:intergenic | 35.0% |
| CTGTACTACGAGGAAAAAAT+GGG | + | chr1_2:63516816-63516835 | None:intergenic | 35.0% | |
| AGATATCTATGCTGTACCTA+AGG | + | chr1_2:63516922-63516941 | None:intergenic | 35.0% | |
| ATAGGAAAACCAACTATAGC+AGG | + | chr1_2:63517019-63517038 | None:intergenic | 35.0% | |
| !!! | AGTTGGTTTTCCTATTCTTC+GGG | - | chr1_2:63517024-63517043 | Msa0084220:intron | 35.0% |
| ATCACAACCAGATATCAGTA+TGG | - | chr1_2:63517052-63517071 | Msa0084220:intron | 35.0% | |
| TACAGTACCATACTGATATC+TGG | + | chr1_2:63517062-63517081 | None:intergenic | 35.0% | |
| GCAATAACAACTCAAGAATG+TGG | + | chr1_2:63517106-63517125 | None:intergenic | 35.0% | |
| CATTGAGACCTTTCAAATCA+CGG | - | chr1_2:63517141-63517160 | Msa0084220:intron | 35.0% | |
| ATTGAGACCTTTCAAATCAC+GGG | - | chr1_2:63517142-63517161 | Msa0084220:intron | 35.0% | |
| TATAAGACCCGTGATTTGAA+AGG | + | chr1_2:63517152-63517171 | None:intergenic | 35.0% | |
| ! | AAATCACGGGTCTTATACTT+GGG | - | chr1_2:63517155-63517174 | Msa0084220:CDS | 35.0% |
| TGAAATGCATGCGAATATGT+TGG | - | chr1_2:63517390-63517409 | Msa0084220:intron | 35.0% | |
| TAGAAAAGGATGATTGCTTG+AGG | - | chr1_2:63517438-63517457 | Msa0084220:intron | 35.0% | |
| AGAAAAGGATGATTGCTTGA+GGG | - | chr1_2:63517439-63517458 | Msa0084220:intron | 35.0% | |
| !! | CAAAGAGCATTATGTGGAAT+TGG | - | chr1_2:63517577-63517596 | Msa0084220:intron | 35.0% |
| GCAAGCTACATTTAATGTCA+GGG | + | chr1_2:63517802-63517821 | None:intergenic | 35.0% | |
| AGCAAGCTACATTTAATGTC+AGG | + | chr1_2:63517803-63517822 | None:intergenic | 35.0% | |
| ! | TTCAAGTTATTGCGCATTGA+GGG | - | chr1_2:63518007-63518026 | Msa0084220:intron | 35.0% |
| GAAAGAACGGTTTATTGCAT+AGG | + | chr1_2:63518303-63518322 | None:intergenic | 35.0% | |
| AAACCGTTCTTTCAAACTGA+TGG | - | chr1_2:63518310-63518329 | Msa0084220:intron | 35.0% | |
| AGCTTGGCAAATAACTATGT+TGG | - | chr1_2:63518620-63518639 | Msa0084220:CDS | 35.0% | |
| ! | GCAAATAACTATGTTGGTGA+AGG | - | chr1_2:63518626-63518645 | Msa0084220:CDS | 35.0% |
| ACTATACGCCAATCATTTCT+CGG | - | chr1_2:63518662-63518681 | Msa0084220:CDS | 35.0% | |
| ATGGTATACCGAGAAATGAT+TGG | + | chr1_2:63518673-63518692 | None:intergenic | 35.0% | |
| !! | TGGATTAGTTAAAGAGGGTA+TGG | - | chr1_2:63518840-63518859 | Msa0084220:intron | 35.0% |
| !! | GGATTAGTTAAAGAGGGTAT+GGG | - | chr1_2:63518841-63518860 | Msa0084220:intron | 35.0% |
| ! | GATTAGTTAAAGAGGGTATG+GGG | - | chr1_2:63518842-63518861 | Msa0084220:intron | 35.0% |
| ! | TAAGGGGTGTAATGTGATTA+AGG | - | chr1_2:63518948-63518967 | Msa0084220:intron | 35.0% |
| CCAGAAACAGAATAAATGCT+AGG | + | chr1_2:63518981-63519000 | None:intergenic | 35.0% | |
| CCTAGCATTTATTCTGTTTC+TGG | - | chr1_2:63518978-63518997 | Msa0084220:intron | 35.0% | |
| TGACAAACTCTCCATATTAC+AGG | + | chr1_2:63519154-63519173 | None:intergenic | 35.0% | |
| TCATGGGAGACAACAAATTA+CGG | + | chr1_2:63519280-63519299 | None:intergenic | 35.0% | |
| TCTCCCATGATATTCTGAAT+GGG | - | chr1_2:63519290-63519309 | Msa0084220:intron | 35.0% | |
| CAAAATTTGGATGAACTCCA+TGG | + | chr1_2:63519368-63519387 | None:intergenic | 35.0% | |
| CTATAGGAAAATTTGTGCAG+TGG | - | chr1_2:63519911-63519930 | Msa0084220:intron | 35.0% | |
| ATTCGTGGTTAGAAATGACA+TGG | - | chr1_2:63520041-63520060 | Msa0084220:intron | 35.0% | |
| TTCGTGGTTAGAAATGACAT+GGG | - | chr1_2:63520042-63520061 | Msa0084220:intron | 35.0% | |
| !!! | TTTTTTCTGGACTCATTTCC+CGG | + | chr1_2:63520344-63520363 | None:intergenic | 35.0% |
| ! | CAAATATTGAATGGTAACGC+AGG | + | chr1_2:63520490-63520509 | None:intergenic | 35.0% |
| ATCTAGACATGCTTCACAAT+TGG | - | chr1_2:63520564-63520583 | Msa0084220:intron | 35.0% | |
| AGACAGAGAAGAAATTAAGG+GGG | + | chr1_2:63520641-63520660 | None:intergenic | 35.0% | |
| ! | TCTTATAGTTGTGTTTGCTG+AGG | - | chr1_2:63520942-63520961 | Msa0084220:CDS | 35.0% |
| GTGGAACTAGAATAGGATAT+TGG | - | chr1_2:63520976-63520995 | Msa0084220:CDS | 35.0% | |
| ! | GGAAGAAAGTTCATTTGCTA+AGG | + | chr1_2:63521050-63521069 | None:intergenic | 35.0% |
| CATAATCCAACCAAATGCTA+GGG | + | chr1_2:63521071-63521090 | None:intergenic | 35.0% | |
| !! | GGATTGGGATTTTGAAGATG+TGG | + | chr1_2:63514259-63514278 | None:intergenic | 40.0% |
| !! | AATGGAAACGGATTGGGATT+GGG | + | chr1_2:63514274-63514293 | None:intergenic | 40.0% |
| CGTTAACAATGGAAACGGAT+TGG | + | chr1_2:63514281-63514300 | None:intergenic | 40.0% | |
| !! | CGCAAAAGGTTAGTTTCAGA+AGG | + | chr1_2:63514400-63514419 | None:intergenic | 40.0% |
| AAACGACAATTAATCGCAGC+TGG | - | chr1_2:63514440-63514459 | Msa0084220:intron | 40.0% | |
| ! | ATCGACTCCTACAATTTCAG+GGG | + | chr1_2:63514675-63514694 | None:intergenic | 40.0% |
| ! | GATCGACTCCTACAATTTCA+GGG | + | chr1_2:63514676-63514695 | None:intergenic | 40.0% |
| ! | TGATCGACTCCTACAATTTC+AGG | + | chr1_2:63514677-63514696 | None:intergenic | 40.0% |
| TGTCGAGCAACTTGATCATT+TGG | - | chr1_2:63514734-63514753 | Msa0084220:intron | 40.0% | |
| ! | GGTCCTTCTACTAACTTGTA+AGG | + | chr1_2:63514918-63514937 | None:intergenic | 40.0% |
| TTGAATGACGTCCCATAACT+TGG | + | chr1_2:63514939-63514958 | None:intergenic | 40.0% | |
| ATGGGACGTCATTCAAAATC+AGG | - | chr1_2:63514943-63514962 | Msa0084220:intron | 40.0% | |
| TGGGACGTCATTCAAAATCA+GGG | - | chr1_2:63514944-63514963 | Msa0084220:intron | 40.0% | |
| CACCCTTGTAATTTGGGAAT+AGG | + | chr1_2:63514981-63515000 | None:intergenic | 40.0% | |
| CCCGATGACCTAAATTTCTA+AGG | - | chr1_2:63515201-63515220 | Msa0084220:CDS | 40.0% | |
| TGCGATATGTTTAGTCAACG+TGG | - | chr1_2:63515271-63515290 | Msa0084220:intron | 40.0% | |
| ! | TTGTTGTTGAAGGTACGATG+TGG | - | chr1_2:63515487-63515506 | Msa0084220:intron | 40.0% |
| ! | TGTTGTTGAAGGTACGATGT+GGG | - | chr1_2:63515488-63515507 | Msa0084220:intron | 40.0% |
| AATGTTCAGACTTATGGAGG+TGG | - | chr1_2:63515608-63515627 | Msa0084220:intron | 40.0% | |
| ATGTTCAGACTTATGGAGGT+GGG | - | chr1_2:63515609-63515628 | Msa0084220:intron | 40.0% | |
| TCAAGATGAATGGCAAGAGT+AGG | + | chr1_2:63515752-63515771 | None:intergenic | 40.0% | |
| !! | ATAGTACCGGTCAAGATGAA+TGG | + | chr1_2:63515762-63515781 | None:intergenic | 40.0% |
| AACTCCTACTTAGGCTTCTT+TGG | - | chr1_2:63515832-63515851 | Msa0084220:CDS | 40.0% | |
| CAATCCAAAGAAGCCTAAGT+AGG | + | chr1_2:63515839-63515858 | None:intergenic | 40.0% | |
| CTTGTGGTGAGACTGTTTAT+CGG | - | chr1_2:63515890-63515909 | Msa0084220:CDS | 40.0% | |
| TTGAGACTACTGCTCACTTT+AGG | + | chr1_2:63516149-63516168 | None:intergenic | 40.0% | |
| AAAACCAGACATTTCCCTCA+AGG | + | chr1_2:63516390-63516409 | None:intergenic | 40.0% | |
| ATTGTTTAGCACAGTGAACC+AGG | - | chr1_2:63516519-63516538 | Msa0084220:intron | 40.0% | |
| TCGAGTTTCATCGAGAGTAA+AGG | + | chr1_2:63516580-63516599 | None:intergenic | 40.0% | |
| TTTACTCTCGATGAAACTCG+AGG | - | chr1_2:63516579-63516598 | Msa0084220:CDS | 40.0% | |
| GCTGTACTACGAGGAAAAAA+TGG | + | chr1_2:63516817-63516836 | None:intergenic | 40.0% | |
| AAGAAACATCATTCAGAGCC+TGG | - | chr1_2:63516956-63516975 | Msa0084220:intron | 40.0% | |
| ! | CAAATCACGGGTCTTATACT+TGG | - | chr1_2:63517154-63517173 | Msa0084220:CDS | 40.0% |
| GTTGTGCTAACTGTGATCTT+AGG | - | chr1_2:63517177-63517196 | Msa0084220:CDS | 40.0% | |
| TGTGATCTTAGGAAGAGCAA+TGG | - | chr1_2:63517188-63517207 | Msa0084220:CDS | 40.0% | |
| CTTAGGAAGAGCAATGGTTA+AGG | - | chr1_2:63517194-63517213 | Msa0084220:CDS | 40.0% | |
| ! | TTAAAAGGTGCACTTTCCCA+TGG | - | chr1_2:63517251-63517270 | Msa0084220:CDS | 40.0% |
| ATGCATGCGAATATGTTGGA+AGG | - | chr1_2:63517394-63517413 | Msa0084220:intron | 40.0% | |
| !! | AGGCATCAAAGAGCATTATG+TGG | - | chr1_2:63517571-63517590 | Msa0084220:intron | 40.0% |
| ! | AAGACCACTGGTACTTGTTA+AGG | + | chr1_2:63517608-63517627 | None:intergenic | 40.0% |
| TGTACAATTCCATTCCAGCA+TGG | + | chr1_2:63517753-63517772 | None:intergenic | 40.0% | |
| ATTCATTGTTTGCACCTCCA+AGG | + | chr1_2:63517956-63517975 | None:intergenic | 40.0% | |
| ! | CTTCAAGTTATTGCGCATTG+AGG | - | chr1_2:63518006-63518025 | Msa0084220:intron | 40.0% |
| !! | TGTTGACTCTTGTGAATCTC+CGG | - | chr1_2:63518034-63518053 | Msa0084220:intron | 40.0% |
| TTGTGAATCTCCGGATGATT+TGG | - | chr1_2:63518043-63518062 | Msa0084220:intron | 40.0% | |
| GCTTGCAACTATACGTCTTA+TGG | + | chr1_2:63518603-63518622 | None:intergenic | 40.0% | |
| AAGACGTATAGTTGCAAGCT+TGG | - | chr1_2:63518604-63518623 | Msa0084220:CDS | 40.0% | |
| ! | GGGTATGGGGTTTGAAATAA+TGG | - | chr1_2:63518855-63518874 | Msa0084220:intron | 40.0% |
| CATGGGAGACAACAAATTAC+GGG | + | chr1_2:63519279-63519298 | None:intergenic | 40.0% | |
| GTCTCCCATGATATTCTGAA+TGG | - | chr1_2:63519289-63519308 | Msa0084220:intron | 40.0% | |
| GGTCCCATTCAGAATATCAT+GGG | + | chr1_2:63519296-63519315 | None:intergenic | 40.0% | |
| TGGTCCCATTCAGAATATCA+TGG | + | chr1_2:63519297-63519316 | None:intergenic | 40.0% | |
| TCTAACAGTGTCTGCAGATA+TGG | - | chr1_2:63519341-63519360 | Msa0084220:intron | 40.0% | |
| AAGAAGAGATGTGATTCCAC+TGG | + | chr1_2:63519472-63519491 | None:intergenic | 40.0% | |
| AATCCAAAACCTTCCAACTC+AGG | - | chr1_2:63519509-63519528 | Msa0084220:CDS | 40.0% | |
| GTTAGAAATGACATGGGATG+CGG | - | chr1_2:63520048-63520067 | Msa0084220:intron | 40.0% | |
| TTGCTCAACTTTCAATGCAC+AGG | - | chr1_2:63520130-63520149 | Msa0084220:intron | 40.0% | |
| TGAAACCTTGTCATATGCTC+AGG | - | chr1_2:63520214-63520233 | Msa0084220:intron | 40.0% | |
| !!! | TTTTGGAATCAGGTATTGGC+TGG | - | chr1_2:63520401-63520420 | Msa0084220:intron | 40.0% |
| ! | ATATTGAATGGTAACGCAGG+TGG | + | chr1_2:63520487-63520506 | None:intergenic | 40.0% |
| AATTGGAAATACGAGCACCA+TGG | - | chr1_2:63520581-63520600 | Msa0084220:intron | 40.0% | |
| TGGTGTAGGTCAGAAATGAA+TGG | + | chr1_2:63520742-63520761 | None:intergenic | 40.0% | |
| TTCATTTCTGACCTACACCA+AGG | - | chr1_2:63520742-63520761 | Msa0084220:CDS | 40.0% | |
| ! | ATAGTTGTGTTTGCTGAGGA+AGG | - | chr1_2:63520946-63520965 | Msa0084220:CDS | 40.0% |
| ! | TAGTTGTGTTTGCTGAGGAA+GGG | - | chr1_2:63520947-63520966 | Msa0084220:CDS | 40.0% |
| GAACTTTCTTCCCTAGCATT+TGG | - | chr1_2:63521058-63521077 | Msa0084220:CDS | 40.0% | |
| TTTCTTCCCTAGCATTTGGT+TGG | - | chr1_2:63521062-63521081 | Msa0084220:CDS | 40.0% | |
| GCATAATCCAACCAAATGCT+AGG | + | chr1_2:63521072-63521091 | None:intergenic | 40.0% | |
| !! | CAATGGAAACGGATTGGGAT+TGG | + | chr1_2:63514275-63514294 | None:intergenic | 45.0% |
| !! | CAATGGAATGAAGGTACCTG+TGG | + | chr1_2:63514346-63514365 | None:intergenic | 45.0% |
| GAAGAATGGAACCTCAAACC+AGG | - | chr1_2:63514485-63514504 | Msa0084220:intron | 45.0% | |
| ACAATTTCAGGGGGGCAAAT+TGG | + | chr1_2:63514665-63514684 | None:intergenic | 45.0% | |
| ATTTGCCCCCCTGAAATTGT+AGG | - | chr1_2:63514665-63514684 | Msa0084220:intron | 45.0% | |
| TCGACTCCTACAATTTCAGG+GGG | + | chr1_2:63514674-63514693 | None:intergenic | 45.0% | |
| GGAGTCGATCATTTACGAGT+AGG | - | chr1_2:63514686-63514705 | Msa0084220:intron | 45.0% | |
| TCGACAACACCTCCAATTTC+TGG | - | chr1_2:63515008-63515027 | Msa0084220:intron | 45.0% | |
| CGACAACACCTCCAATTTCT+GGG | - | chr1_2:63515009-63515028 | Msa0084220:intron | 45.0% | |
| GACAACACCTCCAATTTCTG+GGG | - | chr1_2:63515010-63515029 | Msa0084220:intron | 45.0% | |
| ! | ACAACACCTCCAATTTCTGG+GGG | - | chr1_2:63515011-63515030 | Msa0084220:intron | 45.0% |
| AATTCACCCCCAGAAATTGG+AGG | + | chr1_2:63515020-63515039 | None:intergenic | 45.0% | |
| ! | TCCAATTTCTGGGGGTGAAT+TGG | - | chr1_2:63515019-63515038 | Msa0084220:intron | 45.0% |
| ACCAATTCACCCCCAGAAAT+TGG | + | chr1_2:63515023-63515042 | None:intergenic | 45.0% | |
| ! | AATTTCTGGGGGTGAATTGG+TGG | - | chr1_2:63515022-63515041 | Msa0084220:intron | 45.0% |
| ! | GACTGCTGCTTACAATTTCG+AGG | - | chr1_2:63515394-63515413 | Msa0084220:intron | 45.0% |
| !! | ATCTGCTGATGGACTTGGAA+TGG | - | chr1_2:63515449-63515468 | Msa0084220:intron | 45.0% |
| ! | TGAAGGTACGATGTGGGTAA+TGG | - | chr1_2:63515494-63515513 | Msa0084220:intron | 45.0% |
| TTCGGCTTCAGTTTCAGACA+TGG | + | chr1_2:63515551-63515570 | None:intergenic | 45.0% | |
| !! | AGACTTATGGAGGTGGGTTA+TGG | - | chr1_2:63515615-63515634 | Msa0084220:intron | 45.0% |
| ! | GATAGGGATTTGAGTGTTGC+AGG | - | chr1_2:63515650-63515669 | Msa0084220:intron | 45.0% |
| CTCTTGCCATTCATCTTGAC+CGG | - | chr1_2:63515753-63515772 | Msa0084220:CDS | 45.0% | |
| CTATCCTTGAGGGAAATGTC+TGG | - | chr1_2:63516383-63516402 | Msa0084220:intron | 45.0% | |
| !!! | GTTGCCCTAGCGTTGTTTTT+TGG | - | chr1_2:63516415-63516434 | Msa0084220:intron | 45.0% |
| CGAGCCAAAAAACAACGCTA+GGG | + | chr1_2:63516422-63516441 | None:intergenic | 45.0% | |
| ACGAGCCAAAAAACAACGCT+AGG | + | chr1_2:63516423-63516442 | None:intergenic | 45.0% | |
| TTTAGCACAGTGAACCAGGA+AGG | - | chr1_2:63516523-63516542 | Msa0084220:intron | 45.0% | |
| CAGTGGATGATGAGAAGCTT+TGG | + | chr1_2:63516647-63516666 | None:intergenic | 45.0% | |
| TCATCATCCACTGCTTATGC+AGG | - | chr1_2:63516654-63516673 | Msa0084220:CDS | 45.0% | |
| ATACGTACCTGCATAAGCAG+TGG | + | chr1_2:63516664-63516683 | None:intergenic | 45.0% | |
| TGAATCTAGGCTGTACTACG+AGG | + | chr1_2:63516826-63516845 | None:intergenic | 45.0% | |
| ! | AGCCTGGCATGGCAATTTTA+GGG | - | chr1_2:63516972-63516991 | Msa0084220:intron | 45.0% |
| TTCCCTAAAATTGCCATGCC+AGG | + | chr1_2:63516977-63516996 | None:intergenic | 45.0% | |
| GTTACTCTGCCTGCTATAGT+TGG | - | chr1_2:63517007-63517026 | Msa0084220:intron | 45.0% | |
| GTGATCAAGACCCGAAGAAT+AGG | + | chr1_2:63517037-63517056 | None:intergenic | 45.0% | |
| CATGCGAATATGTTGGAAGG+TGG | - | chr1_2:63517397-63517416 | Msa0084220:intron | 45.0% | |
| AGTGCCTTAACAAGTACCAG+TGG | - | chr1_2:63517601-63517620 | Msa0084220:intron | 45.0% | |
| ! | AAGTACCAGTGGTCTTGACA+AGG | - | chr1_2:63517612-63517631 | Msa0084220:intron | 45.0% |
| TATTGTACAATGGGCCATGC+TGG | - | chr1_2:63517736-63517755 | Msa0084220:intron | 45.0% | |
| TGTTCGCTAGCCAAATCATC+CGG | + | chr1_2:63518056-63518075 | None:intergenic | 45.0% | |
| GGTTGCTCTGTTTGACAATG+AGG | - | chr1_2:63518088-63518107 | Msa0084220:intron | 45.0% | |
| TGCTCTGTTTGACAATGAGG+AGG | - | chr1_2:63518091-63518110 | Msa0084220:intron | 45.0% | |
| AGCATCAGTTGTGAGAACAG+CGG | + | chr1_2:63518200-63518219 | None:intergenic | 45.0% | |
| ATAGCAATCATCGGTAGCGT+GGG | - | chr1_2:63518386-63518405 | Msa0084220:intron | 45.0% | |
| AAACAGCAGTGGTTAGACGT+AGG | + | chr1_2:63518529-63518548 | None:intergenic | 45.0% | |
| ! | ACGTCTAACCACTGCTGTTT+AGG | - | chr1_2:63518529-63518548 | Msa0084220:intron | 45.0% |
| ! | TCTAACCACTGCTGTTTAGG+TGG | - | chr1_2:63518532-63518551 | Msa0084220:intron | 45.0% |
| ! | CTAACCACTGCTGTTTAGGT+GGG | - | chr1_2:63518533-63518552 | Msa0084220:intron | 45.0% |
| CTTATGGCCTGAAACATGGT+GGG | + | chr1_2:63518587-63518606 | None:intergenic | 45.0% | |
| TCTTATGGCCTGAAACATGG+TGG | + | chr1_2:63518588-63518607 | None:intergenic | 45.0% | |
| ACGTCTTATGGCCTGAAACA+TGG | + | chr1_2:63518591-63518610 | None:intergenic | 45.0% | |
| TACTGAACAAATGGTTGCCG+TGG | + | chr1_2:63518916-63518935 | None:intergenic | 45.0% | |
| !! | TTGCCTGAGTTGGAAGGTTT+TGG | + | chr1_2:63519515-63519534 | None:intergenic | 45.0% |
| TAGAGAGGAATTGCCTGAGT+TGG | + | chr1_2:63519525-63519544 | None:intergenic | 45.0% | |
| CTACTCACTGTAGGAATTCG+TGG | - | chr1_2:63520026-63520045 | Msa0084220:intron | 45.0% | |
| !! | AGAAGCGAGTATTGGACCTA+TGG | + | chr1_2:63520079-63520098 | None:intergenic | 45.0% |
| ATAGGTCCAATACTCGCTTC+TGG | - | chr1_2:63520078-63520097 | Msa0084220:intron | 45.0% | |
| TAGGTCCAATACTCGCTTCT+GGG | - | chr1_2:63520079-63520098 | Msa0084220:intron | 45.0% | |
| CAATTCCACAGTCAACCGTT+CGG | + | chr1_2:63520113-63520132 | None:intergenic | 45.0% | |
| TCAAGCCTGAGCATATGACA+AGG | + | chr1_2:63520222-63520241 | None:intergenic | 45.0% | |
| TTGTAACCATGTCTGGCTGT+TGG | - | chr1_2:63520259-63520278 | Msa0084220:intron | 45.0% | |
| ! | CATAGACAAGATGCTGACTG+TGG | - | chr1_2:63520886-63520905 | Msa0084220:intron | 45.0% |
| ! | AGTTGTGTTTGCTGAGGAAG+GGG | - | chr1_2:63520948-63520967 | Msa0084220:CDS | 45.0% |
| GGTGCTAGTGGAACTAGAAT+AGG | - | chr1_2:63520969-63520988 | Msa0084220:CDS | 45.0% | |
| !! | AATTAATAATGAAAAATATA+AGG | - | chr1_2:63516167-63516186 | Msa0084220:intron | 5.0% |
| !! | ATTAATAATGAAAAATATAA+GGG | - | chr1_2:63516168-63516187 | Msa0084220:intron | 5.0% |
| !!! | ATATGTTTTAAAAAAATTAT+TGG | + | chr1_2:63516739-63516758 | None:intergenic | 5.0% |
| !! | ATACAAAAAAAAAAAAAAAA+AGG | + | chr1_2:63520321-63520340 | None:intergenic | 5.0% |
| GAAGACACGTCGTCGAATGA+AGG | + | chr1_2:63514223-63514242 | None:intergenic | 50.0% | |
| AGCTGCACATGAAGCGCAAA+AGG | + | chr1_2:63514414-63514433 | None:intergenic | 50.0% | |
| GAATGGAACCTCAAACCAGG+TGG | - | chr1_2:63514488-63514507 | Msa0084220:intron | 50.0% | |
| ! | AGTAACGTCCACCTGGTTTG+AGG | + | chr1_2:63514499-63514518 | None:intergenic | 50.0% |
| GTGAAGAAGTAACGTCCACC+TGG | + | chr1_2:63514506-63514525 | None:intergenic | 50.0% | |
| ! | TGTTTGGTTGCTTTCGCCGT+TGG | - | chr1_2:63514539-63514558 | Msa0084220:intron | 50.0% |
| CGACTCCTACAATTTCAGGG+GGG | + | chr1_2:63514673-63514692 | None:intergenic | 50.0% | |
| !! | GCCTTCACTGACGCTGTTTT+CGG | + | chr1_2:63515569-63515588 | None:intergenic | 50.0% |
| !! | GAGGTGGGTTATGGCATACT+TGG | - | chr1_2:63515624-63515643 | Msa0084220:intron | 50.0% |
| ACATCATTCAGAGCCTGGCA+TGG | - | chr1_2:63516961-63516980 | Msa0084220:intron | 50.0% | |
| ! | GAGCCTGGCATGGCAATTTT+AGG | - | chr1_2:63516971-63516990 | Msa0084220:intron | 50.0% |
| AGGATGATTGCTTGAGGGCA+AGG | - | chr1_2:63517444-63517463 | Msa0084220:intron | 50.0% | |
| TACAATGGGCCATGCTGGAA+TGG | - | chr1_2:63517741-63517760 | Msa0084220:intron | 50.0% | |
| GATACTCAACCTAGCTGCCT+TGG | - | chr1_2:63517936-63517955 | Msa0084220:intron | 50.0% | |
| TGGCTAGCGAACAAGCGATT+CGG | - | chr1_2:63518063-63518082 | Msa0084220:intron | 50.0% | |
| ! | TAGCGAACAAGCGATTCGGA+TGG | - | chr1_2:63518067-63518086 | Msa0084220:intron | 50.0% |
| GCATCAGTTGTGAGAACAGC+GGG | + | chr1_2:63518199-63518218 | None:intergenic | 50.0% | |
| CATAGCAATCATCGGTAGCG+TGG | - | chr1_2:63518385-63518404 | Msa0084220:intron | 50.0% | |
| TGAACCCACCTAAACAGCAG+TGG | + | chr1_2:63518540-63518559 | None:intergenic | 50.0% | |
| GTGGGTTCAGATTCTGCTCA+AGG | - | chr1_2:63518551-63518570 | Msa0084220:intron | 50.0% | |
| TCAGATTCTGCTCAAGGAGC+TGG | - | chr1_2:63518557-63518576 | Msa0084220:intron | 50.0% | |
| ! | GTCTCAAGCTGTTTCAGCCA+CGG | - | chr1_2:63518896-63518915 | Msa0084220:intron | 50.0% |
| ACAAGTCCTTTCTGCAGCTC+TGG | + | chr1_2:63519417-63519436 | None:intergenic | 50.0% | |
| ! | GAGGAATTGCCTGAGTTGGA+AGG | + | chr1_2:63519521-63519540 | None:intergenic | 50.0% |
| ATGGGATGCGGATCAACCAT+AGG | - | chr1_2:63520060-63520079 | Msa0084220:intron | 50.0% | |
| AGGTCCAATACTCGCTTCTG+GGG | - | chr1_2:63520080-63520099 | Msa0084220:intron | 50.0% | |
| GCTCAGGCTTGATACCGAAA+AGG | - | chr1_2:63520230-63520249 | Msa0084220:intron | 50.0% | |
| CAAGAACCAACAGCCAGACA+TGG | + | chr1_2:63520268-63520287 | None:intergenic | 50.0% | |
| AACGCAGGTGGAGGTTTCAA+CGG | + | chr1_2:63520475-63520494 | None:intergenic | 50.0% | |
| ! | TTGAATGGTAACGCAGGTGG+AGG | + | chr1_2:63520484-63520503 | None:intergenic | 50.0% |
| ! | ACGTGGTTTGGCCAAGAGTA+AGG | + | chr1_2:63520516-63520535 | None:intergenic | 50.0% |
| TTACTCTTGGCCAAACCACG+TGG | - | chr1_2:63520515-63520534 | Msa0084220:intron | 50.0% | |
| TACTCTTGGCCAAACCACGT+GGG | - | chr1_2:63520516-63520535 | Msa0084220:intron | 50.0% | |
| AATTCAACCTAGTGCCCACG+TGG | + | chr1_2:63520533-63520552 | None:intergenic | 50.0% | |
| CCATGGAAATACATGCCGCT+CGG | - | chr1_2:63520598-63520617 | Msa0084220:intron | 50.0% | |
| TGCTCTCGGAGCAAATAGAG+AGG | + | chr1_2:63521128-63521147 | None:intergenic | 50.0% | |
| TGGACTCATTTCCACGCCAC+AGG | - | chr1_2:63514327-63514346 | Msa0084220:exon | 55.0% | |
| !! | GAATGAAGGTACCTGTGGCG+TGG | + | chr1_2:63514341-63514360 | None:intergenic | 55.0% |
| GCCGAAAACAGCGTCAGTGA+AGG | - | chr1_2:63515565-63515584 | Msa0084220:intron | 55.0% | |
| ! | TTGGGCCTTGTCAAGACCAC+TGG | + | chr1_2:63517620-63517639 | None:intergenic | 55.0% |
| ACTCAACCTAGCTGCCTTGG+AGG | - | chr1_2:63517939-63517958 | Msa0084220:intron | 55.0% | |
| TTTGCACCTCCAAGGCAGCT+AGG | + | chr1_2:63517948-63517967 | None:intergenic | 55.0% | |
| TGGTGCACCCACCATGTTTC+AGG | - | chr1_2:63518577-63518596 | Msa0084220:intron | 55.0% | |
| GTGTCTGCAGATATGGCCCA+TGG | - | chr1_2:63519348-63519367 | Msa0084220:intron | 55.0% | |
| ! | GTCCTTTCTGCAGCTCTGGT+CGG | + | chr1_2:63519413-63519432 | None:intergenic | 55.0% |
| AACCAGCGCTATGCTACCAG+TGG | - | chr1_2:63519453-63519472 | Msa0084220:intron | 55.0% | |
| TTCCACTGGTAGCATAGCGC+TGG | + | chr1_2:63519458-63519477 | None:intergenic | 55.0% | |
| CCAACCCCAGAAGCGAGTAT+TGG | + | chr1_2:63520087-63520106 | None:intergenic | 55.0% | |
| !! | CCAATACTCGCTTCTGGGGT+TGG | - | chr1_2:63520084-63520103 | Msa0084220:intron | 55.0% |
| !! | TTCTGGGGTTGGCATCCGAA+CGG | - | chr1_2:63520095-63520114 | Msa0084220:intron | 55.0% |
| AACCTAGTGCCCACGTGGTT+TGG | + | chr1_2:63520528-63520547 | None:intergenic | 55.0% | |
| CCGAGCGGCATGTATTTCCA+TGG | + | chr1_2:63520601-63520620 | None:intergenic | 55.0% | |
| ! | CTTTCTGCAGCTCTGGTCGG+TGG | + | chr1_2:63519410-63519429 | None:intergenic | 60.0% |
| CACCGACCAGAGCTGCAGAA+AGG | - | chr1_2:63519408-63519427 | Msa0084220:intron | 60.0% | |
| GGCATCCGAACGGTTGACTG+TGG | - | chr1_2:63520105-63520124 | Msa0084220:intron | 60.0% | |
| !! | TGCTGAGGAAGGGGTGCTAG+TGG | - | chr1_2:63520957-63520976 | Msa0084220:CDS | 60.0% |
| GGCCAAACCACGTGGGCACT+AGG | - | chr1_2:63520523-63520542 | Msa0084220:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 63514034 | 63521228 | 63514034 | ID=Msa0084220;Name=Msa0084220 |
| chr1_2 | mRNA | 63514034 | 63521228 | 63514034 | ID=Msa0084220-mRNA-1;Parent=Msa0084220;Name=Msa0084220-mRNA-1;_AED=0.12;_eAED=0.12;_QI=65|0.77|0.9|1|1|1|10|312|543 |
| chr1_2 | exon | 63514034 | 63514454 | 63514034 | ID=Msa0084220-mRNA-1:exon:21276;Parent=Msa0084220-mRNA-1 |
| chr1_2 | exon | 63515111 | 63515223 | 63515111 | ID=Msa0084220-mRNA-1:exon:21275;Parent=Msa0084220-mRNA-1 |
| chr1_2 | exon | 63515732 | 63515913 | 63515732 | ID=Msa0084220-mRNA-1:exon:21274;Parent=Msa0084220-mRNA-1 |
| chr1_2 | exon | 63516579 | 63516711 | 63516579 | ID=Msa0084220-mRNA-1:exon:21273;Parent=Msa0084220-mRNA-1 |
| chr1_2 | exon | 63517150 | 63517389 | 63517150 | ID=Msa0084220-mRNA-1:exon:21272;Parent=Msa0084220-mRNA-1 |
| chr1_2 | exon | 63517489 | 63517533 | 63517489 | ID=Msa0084220-mRNA-1:exon:21271;Parent=Msa0084220-mRNA-1 |
| chr1_2 | exon | 63518587 | 63518734 | 63518587 | ID=Msa0084220-mRNA-1:exon:21270;Parent=Msa0084220-mRNA-1 |
| chr1_2 | exon | 63519488 | 63519763 | 63519488 | ID=Msa0084220-mRNA-1:exon:21269;Parent=Msa0084220-mRNA-1 |
| chr1_2 | exon | 63520695 | 63520830 | 63520695 | ID=Msa0084220-mRNA-1:exon:21268;Parent=Msa0084220-mRNA-1 |
| chr1_2 | exon | 63520914 | 63521228 | 63520914 | ID=Msa0084220-mRNA-1:exon:21267;Parent=Msa0084220-mRNA-1 |
| chr1_2 | five_prime_UTR | 63521164 | 63521228 | 63521164 | ID=Msa0084220-mRNA-1:five_prime_utr;Parent=Msa0084220-mRNA-1 |
| chr1_2 | CDS | 63520914 | 63521163 | 63520914 | ID=Msa0084220-mRNA-1:cds;Parent=Msa0084220-mRNA-1 |
| chr1_2 | CDS | 63520695 | 63520830 | 63520695 | ID=Msa0084220-mRNA-1:cds;Parent=Msa0084220-mRNA-1 |
| chr1_2 | CDS | 63519488 | 63519763 | 63519488 | ID=Msa0084220-mRNA-1:cds;Parent=Msa0084220-mRNA-1 |
| chr1_2 | CDS | 63518587 | 63518734 | 63518587 | ID=Msa0084220-mRNA-1:cds;Parent=Msa0084220-mRNA-1 |
| chr1_2 | CDS | 63517489 | 63517533 | 63517489 | ID=Msa0084220-mRNA-1:cds;Parent=Msa0084220-mRNA-1 |
| chr1_2 | CDS | 63517150 | 63517389 | 63517150 | ID=Msa0084220-mRNA-1:cds;Parent=Msa0084220-mRNA-1 |
| chr1_2 | CDS | 63516579 | 63516711 | 63516579 | ID=Msa0084220-mRNA-1:cds;Parent=Msa0084220-mRNA-1 |
| chr1_2 | CDS | 63515732 | 63515913 | 63515732 | ID=Msa0084220-mRNA-1:cds;Parent=Msa0084220-mRNA-1 |
| chr1_2 | CDS | 63515111 | 63515223 | 63515111 | ID=Msa0084220-mRNA-1:cds;Parent=Msa0084220-mRNA-1 |
| chr1_2 | CDS | 63514346 | 63514454 | 63514346 | ID=Msa0084220-mRNA-1:cds;Parent=Msa0084220-mRNA-1 |
| chr1_2 | three_prime_UTR | 63514034 | 63514345 | 63514034 | ID=Msa0084220-mRNA-1:three_prime_utr;Parent=Msa0084220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
