AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1183730


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183730 MtrunA17_Chr8g0335671 97.131 488 13 1 1 487 1 488 0.0 984
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183730 AT2G44760.1 58.594 512 166 9 1 485 7 499 0.0 573

Find 160 sgRNAs with CRISPR-Local

Find 450 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGTTGTGATTGGGTTTC+TGG 0.021910 8_1:-19085078 None:intergenic
CTTGCTGTGGAAGATGATTT+TGG 0.159181 8_1:-19085043 None:intergenic
CTAGCAGTCTCAGTGGAATT+TGG 0.196435 8_1:+19088329 Msa1183730:CDS
AAAGACTTAGCTATGGTATT+TGG 0.210694 8_1:+19090763 Msa1183730:three_prime_UTR
AAATCCAAAGGAAGGTTAAT+TGG 0.216672 8_1:+19088494 Msa1183730:CDS
TAATGTAAATTCCGTTATTA+TGG 0.225133 8_1:-19090921 None:intergenic
GAGTTTGCATGTTCTAAATT+TGG 0.283606 8_1:-19084934 None:intergenic
ACTTCCATTGTTGTTGTGAT+TGG 0.283957 8_1:-19085086 None:intergenic
ATCAGCGCTACTCCGGTCTA+TGG 0.306706 8_1:+19090239 Msa1183730:CDS
GCGACGGCACTGCCTCTATA+CGG 0.317264 8_1:-19088450 None:intergenic
CATTTATGAATTCTATAGTA+TGG 0.319358 8_1:-19089549 None:intergenic
GTACATTTAAAACAGTGATA+TGG 0.322051 8_1:+19090139 Msa1183730:intron
GAAGGTGGTTAAGAGGAATA+AGG 0.324867 8_1:+19085195 Msa1183730:CDS
ATACTGAATTGCAATAAGTT+TGG 0.327235 8_1:+19090786 Msa1183730:three_prime_UTR
TAGGTTGATTTGTAATGTTT+TGG 0.331087 8_1:+19090829 Msa1183730:three_prime_UTR
TGCAGGATGGATCTTATTCT+AGG 0.335281 8_1:+19088955 Msa1183730:intron
CATACTATAGAATTCATAAA+TGG 0.344839 8_1:+19089550 Msa1183730:CDS
ATCCACATAATTTATACATT+AGG 0.348324 8_1:-19090587 None:intergenic
GGCATAGCTAAGAATGGTTC+CGG 0.348939 8_1:+19088565 Msa1183730:CDS
AGTGGTAGAGTTGTTGTTAC+TGG 0.356172 8_1:+19085226 Msa1183730:CDS
TTCTCCAATCACTGCTGAAA+TGG 0.356302 8_1:+19088372 Msa1183730:CDS
GTTGTTGTGATTGGGTTTCT+GGG 0.360953 8_1:-19085077 None:intergenic
CTAAATTTGGTCGGATAGAA+TGG 0.369843 8_1:-19084921 None:intergenic
TATGACCATTCTATGGCTTC+CGG 0.376585 8_1:+19090394 Msa1183730:CDS
TCACCCAATTAACCTTCCTT+TGG 0.377747 8_1:-19088498 None:intergenic
AGATGTCATGGGCTGTGAAC+CGG 0.387211 8_1:+19088699 Msa1183730:CDS
CTTGTGATGGAAAGAGATTA+TGG 0.389804 8_1:+19090500 Msa1183730:CDS
CTTCCATTGTTGTTGTGATT+GGG 0.396432 8_1:-19085085 None:intergenic
GGCTCCATTTCAGCAGTGAT+TGG 0.397415 8_1:-19088376 None:intergenic
CGTACTTGCGAACCTCAAAC+TGG 0.401768 8_1:+19084887 Msa1183730:five_prime_UTR
GGAGATAGATAGAAAGGAAA+AGG 0.404671 8_1:-19085011 None:intergenic
GAGTGTGTGGAGGAAGGTTT+TGG 0.409688 8_1:-19084972 None:intergenic
TTCTTGACACTTATTTCCAT+TGG 0.410247 8_1:-19088397 None:intergenic
TGTTACTGGTGCTATGTTGA+TGG 0.411163 8_1:+19085240 Msa1183730:CDS
ATGACCATTCTATGGCTTCC+GGG 0.414312 8_1:+19090395 Msa1183730:CDS
AGAAAGAGAAGAAGGGAAGA+GGG 0.417593 8_1:+19085164 Msa1183730:CDS
TGCAGGATATGACCATTCTA+TGG 0.418224 8_1:+19090387 Msa1183730:CDS
AATCAACCTAAGTATCATAC+TGG 0.419432 8_1:-19090816 None:intergenic
AAGAAAGAGAAGAAGGGAAG+AGG 0.440672 8_1:+19085163 Msa1183730:CDS
AAGGTGGTTAAGAGGAATAA+GGG 0.441564 8_1:+19085196 Msa1183730:CDS
CCAAAGTAGTTGGCACTATC+CGG 0.442331 8_1:-19090344 None:intergenic
ATGTTATGTTGATATCAATA+AGG 0.445468 8_1:+19090427 Msa1183730:CDS
TGTTGCGGCATTTCACCATA+AGG 0.447248 8_1:-19088529 None:intergenic
GAAGTAAGAAGGTGGTTAAG+AGG 0.447864 8_1:+19085188 Msa1183730:CDS
AATCCAAAGGAAGGTTAATT+GGG 0.448257 8_1:+19088495 Msa1183730:CDS
TGGTTAAAGGCTGCCACAAA+AGG 0.448879 8_1:+19089515 Msa1183730:CDS
GAGATAGATAGAAAGGAAAA+GGG 0.454132 8_1:-19085010 None:intergenic
CATGACCCTGTCAACTCTGA+TGG 0.454717 8_1:-19090203 None:intergenic
CCCTGTCAACTCTGATGGAT+TGG 0.456022 8_1:-19090198 None:intergenic
AGAGGCAGTGCCGTCGCATT+CGG 0.457112 8_1:+19088456 Msa1183730:CDS
ACTTGTTCAAACTTGAAAGT+TGG 0.459938 8_1:-19089032 None:intergenic
ATAGCCGGGCTGCGAAAATC+CGG 0.461067 8_1:+19088604 Msa1183730:CDS
TGAAGAGAGTGTGTGGAGGA+AGG 0.461241 8_1:-19084978 None:intergenic
TTGAGTCCAGTATGATACTT+AGG 0.462292 8_1:+19090810 Msa1183730:three_prime_UTR
GCATAGCTAAGAATGGTTCC+GGG 0.465545 8_1:+19088566 Msa1183730:CDS
CCGGATAGTGCCAACTACTT+TGG 0.466476 8_1:+19090344 Msa1183730:CDS
CAGTTTGAGGTTCGCAAGTA+CGG 0.466743 8_1:-19084886 None:intergenic
CACATAATTTATACATTAGG+TGG 0.469527 8_1:-19090584 None:intergenic
TCAGCGCTACTCCGGTCTAT+GGG 0.470374 8_1:+19090240 Msa1183730:CDS
GGAGGAGAGGCTTGACATGC+AGG 0.472665 8_1:+19090370 Msa1183730:CDS
CTATACTCTTTCCCGTATAG+AGG 0.475509 8_1:+19088438 Msa1183730:CDS
CACTGCTGAAATGGAGCCAA+TGG 0.477776 8_1:+19088381 Msa1183730:CDS
CACCTAATGTATAAATTATG+TGG 0.478281 8_1:+19090585 Msa1183730:exon
TGCTGTGTATGAAGAGGAAT+GGG 0.483464 8_1:+19089600 Msa1183730:CDS
TGGGTGACTTTGAATCCTTA+TGG 0.484540 8_1:+19088514 Msa1183730:CDS
AAGTCAAAGGATTCAAATGT+AGG 0.488900 8_1:-19088652 None:intergenic
CTCCTCCTCGCCAAAGTAGT+TGG 0.490934 8_1:-19090354 None:intergenic
GCAGGATGGATCTTATTCTA+GGG 0.494716 8_1:+19088956 Msa1183730:intron
GGAAATCAGAGATGAAGAGA+AGG 0.496039 8_1:+19090552 Msa1183730:CDS
ACTTGCTAAGAAAGAGAAGA+AGG 0.503720 8_1:+19085156 Msa1183730:CDS
GATGTCATGGGCTGTGAACC+GGG 0.504126 8_1:+19088700 Msa1183730:CDS
GGGAAGAGGGAGAAGTAAGA+AGG 0.504544 8_1:+19085177 Msa1183730:CDS
TTGTGATGGAAAGAGATTAT+GGG 0.505191 8_1:+19090501 Msa1183730:CDS
GAAAGAGATTATGGGTTGGA+TGG 0.505505 8_1:+19090509 Msa1183730:CDS
GATCTTAAAGCTCCTATAGC+CGG 0.507763 8_1:+19088589 Msa1183730:CDS
ACCAATCCATCAGAGTTGAC+AGG 0.511162 8_1:+19090197 Msa1183730:CDS
GGCTGTGATGATTCTTGCTG+TGG 0.517454 8_1:-19085056 None:intergenic
TTCTATGCATCGGAGTTGGC+TGG 0.518081 8_1:+19090456 Msa1183730:CDS
CGACGGCACTGCCTCTATAC+GGG 0.521684 8_1:-19088449 None:intergenic
CATAAAAGTAACCATAATAA+CGG 0.522865 8_1:+19090910 Msa1183730:three_prime_UTR
CTAGCAAATGTGTTCCATGC+TGG 0.522985 8_1:-19088310 None:intergenic
AGGAATAAGGGTAAGAAGAG+TGG 0.524622 8_1:+19085208 Msa1183730:CDS
ACATAACATGTCACACCTCC+CGG 0.529213 8_1:-19090413 None:intergenic
ATCTTAAAGCTCCTATAGCC+GGG 0.530708 8_1:+19088590 Msa1183730:CDS
TGAAACTGTTCTTCAGACTC+AGG 0.533405 8_1:+19085267 Msa1183730:CDS
GGCCCTGTGGATATTTCAGT+GGG 0.533641 8_1:+19088978 Msa1183730:CDS
GACAATGGCATAGCTAAGAA+TGG 0.533653 8_1:+19088559 Msa1183730:CDS
ACCTCCCGGAAGCCATAGAA+TGG 0.535315 8_1:-19090399 None:intergenic
GAAAACTTAAAGATGTGAGA+TGG 0.535360 8_1:+19090531 Msa1183730:CDS
GAGACTAAAGCGGAAGAAGA+AGG 0.536295 8_1:+19090266 Msa1183730:CDS
AATGGAAGTATAAGAGTGAA+AGG 0.537355 8_1:+19085100 Msa1183730:CDS
GGTTGGGGAGATAGATAGAA+AGG 0.538094 8_1:-19085017 None:intergenic
TATAAGAGTGAAAGGAAACA+AGG 0.538499 8_1:+19085108 Msa1183730:CDS
CATCAGAGTTGACAGGGTCA+TGG 0.540108 8_1:+19090204 Msa1183730:CDS
CCATTGTCTTCAGCTTGTTG+CGG 0.542262 8_1:-19088544 None:intergenic
GGTATTCTATGCATCGGAGT+TGG 0.543166 8_1:+19090452 Msa1183730:CDS
CTTCAAGAAAAGTGATGTGA+TGG 0.543502 8_1:+19088672 Msa1183730:CDS
GTACAGAAACTCTGAAGAAG+AGG 0.545629 8_1:+19090315 Msa1183730:CDS
ACTTCAAAGTAAACAAGGCC+CGG 0.546232 8_1:-19088718 None:intergenic
TTAGTCTCCTCCCCATAGAC+CGG 0.546679 8_1:-19090251 None:intergenic
TTGCATGTTCTAAATTTGGT+CGG 0.550779 8_1:-19084930 None:intergenic
GGGCCCTGTGGATATTTCAG+TGG 0.556207 8_1:+19088977 Msa1183730:CDS
TAGAAAGGAAAAGGGACTGT+GGG 0.556219 8_1:-19085002 None:intergenic
GTCATCAACACAAGTAGGAC+TGG 0.557404 8_1:-19089623 None:intergenic
TTATTGCAAAGACTTAGCTA+TGG 0.563738 8_1:+19090756 Msa1183730:three_prime_UTR
TATGTTGATATCAATAAGGA+TGG 0.564472 8_1:+19090431 Msa1183730:CDS
GTTGGCTGGTACTCTGATGA+AGG 0.567557 8_1:+19090470 Msa1183730:CDS
AAGAGGGAGAAGTAAGAAGG+TGG 0.570550 8_1:+19085180 Msa1183730:CDS
GAACACACAAAACCAGTTTG+AGG 0.571162 8_1:-19084899 None:intergenic
CTTTGAAATCAGCGCTACTC+CGG 0.574322 8_1:+19090232 Msa1183730:CDS
TCTTCAGAGTTTCTGTACAA+AGG 0.577038 8_1:-19090310 None:intergenic
CATAATCTCTTTCCATCACA+AGG 0.578509 8_1:-19090499 None:intergenic
TATAGGAGCTTTAAGATCCC+CGG 0.580512 8_1:-19088584 None:intergenic
TTGCTGTGTATGAAGAGGAA+TGG 0.582897 8_1:+19089599 Msa1183730:CDS
ACTACTTTGGCGAGGAGGAG+AGG 0.584851 8_1:+19090357 Msa1183730:CDS
AAAGAGTATAGCAGTCGTAA+AGG 0.589911 8_1:-19088426 None:intergenic
CGCTACTCCGGTCTATGGGG+AGG 0.591916 8_1:+19090244 Msa1183730:CDS
AGTGGAATTTGGAAAGGTGT+AGG 0.593266 8_1:+19088340 Msa1183730:CDS
TGAAGGAATCAACCTTGTGA+TGG 0.594121 8_1:+19090487 Msa1183730:CDS
CCAATCCATCAGAGTTGACA+GGG 0.594885 8_1:+19090198 Msa1183730:CDS
TACATCTCAAATCCAAAGGA+AGG 0.595112 8_1:+19088486 Msa1183730:CDS
GCACCCACTGAAATATCCAC+AGG 0.598924 8_1:-19088981 None:intergenic
ATCTTATTCTAGGGGCCCTG+TGG 0.599367 8_1:+19088965 Msa1183730:CDS
AAGGATGGTATTCTATGCAT+CGG 0.599587 8_1:+19090446 Msa1183730:CDS
TGCCAACTACTTTGGCGAGG+AGG 0.603070 8_1:+19090352 Msa1183730:CDS
CTTGCTAAGAAAGAGAAGAA+GGG 0.603612 8_1:+19085157 Msa1183730:CDS
AACGTACATCTCAAATCCAA+AGG 0.605463 8_1:+19088482 Msa1183730:CDS
CCGCAACAAGCTGAAGACAA+TGG 0.610241 8_1:+19088544 Msa1183730:CDS
TGTGGGTTGAAGAGAGTGTG+TGG 0.612277 8_1:-19084985 None:intergenic
CTCATGTCATCAACACAAGT+AGG 0.612339 8_1:-19089628 None:intergenic
ACTGGTTATGCAATGCACCT+AGG 0.612599 8_1:+19090857 Msa1183730:three_prime_UTR
AACCAGTAATAAAACCAGCA+TGG 0.618754 8_1:+19088296 Msa1183730:CDS
TCTGAAGAAGAGGAGCTCGC+CGG 0.619209 8_1:+19090325 Msa1183730:CDS
CAGGATGGATCTTATTCTAG+GGG 0.620220 8_1:+19088957 Msa1183730:intron
TCTGTACAAAGGTAGACATA+CGG 0.623226 8_1:-19090299 None:intergenic
AGTCTCAGTGGAATTTGGAA+AGG 0.623926 8_1:+19088334 Msa1183730:CDS
CAGCGCTACTCCGGTCTATG+GGG 0.629844 8_1:+19090241 Msa1183730:CDS
AAACCCAATCACAACAACAA+TGG 0.631203 8_1:+19085082 Msa1183730:CDS
GATGGAAAGAGATTATGGGT+TGG 0.632791 8_1:+19090505 Msa1183730:CDS
ATAGAAAGGAAAAGGGACTG+TGG 0.634733 8_1:-19085003 None:intergenic
AATCAGAGATGAAGAGAAGG+TGG 0.636071 8_1:+19090555 Msa1183730:CDS
TGTGATGGAAGAAGATGTCA+TGG 0.637077 8_1:+19088687 Msa1183730:CDS
ACTATAGAATTCATAAATGG+CGG 0.642562 8_1:+19089553 Msa1183730:CDS
AAGGAAACAAGGAGAATGTG+TGG 0.645034 8_1:+19085119 Msa1183730:CDS
TACTTACTTCAAAGTAAACA+AGG 0.646661 8_1:-19088723 None:intergenic
CTTACAAGCTGCGACCACCT+AGG 0.648983 8_1:-19090874 None:intergenic
GAGAGTTGCTGTGTATGAAG+AGG 0.667649 8_1:+19089594 Msa1183730:CDS
CTATGGGGAGGAGACTAAAG+CGG 0.670545 8_1:+19090256 Msa1183730:CDS
CACCCACTGAAATATCCACA+GGG 0.670684 8_1:-19088980 None:intergenic
ACATTTGCTAGCAGTCTCAG+TGG 0.670727 8_1:+19088322 Msa1183730:CDS
CATAGCTAAGAATGGTTCCG+GGG 0.671830 8_1:+19088567 Msa1183730:CDS
TAGTGCCAACTACTTTGGCG+AGG 0.679262 8_1:+19090349 Msa1183730:CDS
CTACTTGTGTTGATGACATG+AGG 0.683815 8_1:+19089629 Msa1183730:CDS
GTACGTTCATCCGAATGCGA+CGG 0.691972 8_1:-19088466 None:intergenic
ACCATTCTATGGCTTCCGGG+AGG 0.697610 8_1:+19090398 Msa1183730:CDS
GGTTATGCAATGCACCTAGG+TGG 0.707456 8_1:+19090860 Msa1183730:three_prime_UTR
ATTCTATAGTATGGACAATG+CGG 0.711770 8_1:-19089540 None:intergenic
GGGTTGAAGAGAGTGTGTGG+AGG 0.729009 8_1:-19084982 None:intergenic
GTGATGGAAGAAGATGTCAT+GGG 0.752957 8_1:+19088688 Msa1183730:CDS
ACAAAGGTAGACATACGGAG+CGG 0.804538 8_1:-19090294 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAGAAAATTTGTTTTAAA+TGG + chr8_1:19087556-19087575 Msa1183730:intron 10.0%
!! ATATCTTATTGTTAATTATT+AGG - chr8_1:19090026-19090045 None:intergenic 10.0%
!! AAACACAATTTCATAATAAA+AGG - chr8_1:19085453-19085472 None:intergenic 15.0%
!! AAAAATATATATATTCTAGC+TGG - chr8_1:19086324-19086343 None:intergenic 15.0%
!! ACACAATTTCATAAAAAAAA+AGG - chr8_1:19086916-19086935 None:intergenic 15.0%
!! AGTTAGATTATTAAAAATGT+TGG + chr8_1:19087236-19087255 Msa1183730:intron 15.0%
!! GTTAGATTATTAAAAATGTT+GGG + chr8_1:19087237-19087256 Msa1183730:intron 15.0%
!!! TCTAAAATTACATATATGAT+TGG + chr8_1:19087277-19087296 Msa1183730:intron 15.0%
!! TAGAAATAAAACAAAAAGAA+GGG - chr8_1:19088171-19088190 None:intergenic 15.0%
!! AGTTATTTACAAATGATAAA+AGG - chr8_1:19088922-19088941 None:intergenic 15.0%
!! ACTAATATAAACATATTTGT+TGG + chr8_1:19089128-19089147 Msa1183730:intron 15.0%
!!! AGAAGCAAATTTTAATTTTA+TGG - chr8_1:19089254-19089273 None:intergenic 15.0%
!!! AAAATTAAAATTTGCTTCTA+CGG + chr8_1:19089255-19089274 Msa1183730:intron 15.0%
!! AATAACTTTATTGAAATCAA+TGG - chr8_1:19090111-19090130 None:intergenic 15.0%
!! AAAAATGATCAAAATGATAA+TGG - chr8_1:19090726-19090745 None:intergenic 15.0%
!!! GTAATGTTTTTTTTTCATCT+GGG + chr8_1:19085289-19085308 Msa1183730:intron 20.0%
!!! TCAACTAACTATTTCTTAAA+AGG - chr8_1:19086815-19086834 None:intergenic 20.0%
!! TGAAATTGTGTTTAAATTTG+TGG + chr8_1:19085460-19085479 Msa1183730:intron 20.0%
!!! ATTTACAATGATAGTGTAAA+GGG - chr8_1:19087190-19087209 None:intergenic 20.0%
!!! TATTTACAATGATAGTGTAA+AGG - chr8_1:19087191-19087210 None:intergenic 20.0%
!! TACATAAATTGAAGTTTGAA+TGG - chr8_1:19087753-19087772 None:intergenic 20.0%
!! AATGTTATCCACAAAAATAA+TGG - chr8_1:19088089-19088108 None:intergenic 20.0%
!! AGAAATAAAACAAAAAGAAG+GGG - chr8_1:19088170-19088189 None:intergenic 20.0%
!! GTAGAAATAAAACAAAAAGA+AGG - chr8_1:19088172-19088191 None:intergenic 20.0%
!! AGCTACAAAATAAATACATT+AGG - chr8_1:19088765-19088784 None:intergenic 20.0%
!!! GTTTTAAAATAACAAATGCA+TGG - chr8_1:19089203-19089222 None:intergenic 20.0%
!!! AATTTTAATTTTATGGCATG+CGG - chr8_1:19089247-19089266 None:intergenic 20.0%
!!! ATAAAATCTATGTTTTCTGT+TGG + chr8_1:19089339-19089358 Msa1183730:intron 20.0%
!! CATTTATGAATTCTATAGTA+TGG - chr8_1:19089552-19089571 None:intergenic 20.0%
!! CATACTATAGAATTCATAAA+TGG + chr8_1:19089550-19089569 Msa1183730:CDS 20.0%
!! TTTAGCACAAAATGTAAATA+AGG - chr8_1:19089663-19089682 None:intergenic 20.0%
!! AATGAAATGATAAATAGTGA+AGG + chr8_1:19089765-19089784 Msa1183730:intron 20.0%
!! ATGAAATGATAAATAGTGAA+GGG + chr8_1:19089766-19089785 Msa1183730:intron 20.0%
!! ATGTTATGTTGATATCAATA+AGG + chr8_1:19090427-19090446 Msa1183730:CDS 20.0%
!! ATCCACATAATTTATACATT+AGG - chr8_1:19090590-19090609 None:intergenic 20.0%
!! CATAAAAGTAACCATAATAA+CGG + chr8_1:19090910-19090929 Msa1183730:three_prime_UTR 20.0%
!!! GGTAATGTTTTTTTTTCATC+TGG + chr8_1:19085288-19085307 Msa1183730:intron 25.0%
!! AAAGTTTTTGTCTTTTGCTT+TGG + chr8_1:19085339-19085358 Msa1183730:intron 25.0%
!! AAGTTTTTGTCTTTTGCTTT+GGG + chr8_1:19085340-19085359 Msa1183730:intron 25.0%
! TAACTAGGGTTAAATTGATT+AGG + chr8_1:19085392-19085411 Msa1183730:intron 25.0%
! AACTAGGGTTAAATTGATTA+GGG + chr8_1:19085393-19085412 Msa1183730:intron 25.0%
! AGTGTAAGAAATATTTACAC+CGG - chr8_1:19085533-19085552 None:intergenic 25.0%
! CATCATAATTAGGAATAAGT+AGG + chr8_1:19085722-19085741 Msa1183730:intron 25.0%
! AAAATAACCGAAACTCAAAA+TGG - chr8_1:19085891-19085910 None:intergenic 25.0%
!!! TTTTGAGTTTCGGTTATTTT+CGG + chr8_1:19085891-19085910 Msa1183730:intron 25.0%
! AAAACAGATCCAAAAAAGAT+GGG + chr8_1:19085992-19086011 Msa1183730:intron 25.0%
!!! CAATCTATTTTTATGAAGTG+CGG - chr8_1:19086077-19086096 None:intergenic 25.0%
! ACTTCATAAAAATAGATTGG+TGG + chr8_1:19086078-19086097 Msa1183730:intron 25.0%
!!! ATGTTGAAGTTGATAAAGTT+GGG + chr8_1:19086837-19086856 Msa1183730:intron 25.0%
! ATACACTATCATTGTAAATG+AGG + chr8_1:19086987-19087006 Msa1183730:intron 25.0%
! TACACTATCATTGTAAATGA+GGG + chr8_1:19086988-19087007 Msa1183730:intron 25.0%
! ATAGTACACTTTAAACTAGT+AGG - chr8_1:19087440-19087459 None:intergenic 25.0%
! GACGTTGAAATTGATAAAAT+TGG + chr8_1:19087503-19087522 Msa1183730:intron 25.0%
! AAATAAATGTATCGTGTGTT+CGG + chr8_1:19087530-19087549 Msa1183730:intron 25.0%
! GTTAGATTATTATCATCCAA+TGG + chr8_1:19087618-19087637 Msa1183730:intron 25.0%
! CAATTTATGTACAGAAGTTT+AGG + chr8_1:19087762-19087781 Msa1183730:intron 25.0%
!!! TAGTTCTAAATAGCTTATTG+CGG - chr8_1:19087869-19087888 None:intergenic 25.0%
! TCGTAAACTATGGAAATTAA+TGG - chr8_1:19087963-19087982 None:intergenic 25.0%
!!! AAATCCATCCATTATTTTTG+TGG + chr8_1:19088078-19088097 Msa1183730:intron 25.0%
!! TTATCCACAAAAATAATGGA+TGG - chr8_1:19088085-19088104 None:intergenic 25.0%
! ATAACATTCAACTTCAAGTA+CGG + chr8_1:19088101-19088120 Msa1183730:intron 25.0%
!! ACAAATACCCAAATGAATTT+TGG - chr8_1:19088132-19088151 None:intergenic 25.0%
! ACTCAAATCAGTATAATGTT+CGG - chr8_1:19088261-19088280 None:intergenic 25.0%
!!! ACGATTTGTTATTTTTTCAC+CGG - chr8_1:19088626-19088645 None:intergenic 25.0%
! TACTTACTTCAAAGTAAACA+AGG - chr8_1:19088726-19088745 None:intergenic 25.0%
! AAAGAGAAAGAAACAATCAA+CGG - chr8_1:19088895-19088914 None:intergenic 25.0%
! AACTACATTTGATAAATTGC+AGG + chr8_1:19088938-19088957 Msa1183730:intron 25.0%
!! ATAAACATATTTGTTGGTGT+TGG + chr8_1:19089134-19089153 Msa1183730:intron 25.0%
!!! ATTTTAATTTTATGGCATGC+GGG - chr8_1:19089246-19089265 None:intergenic 25.0%
!!! AAAAGTATTGCAACTCTTAT+TGG - chr8_1:19089461-19089480 None:intergenic 25.0%
! ACTATAGAATTCATAAATGG+CGG + chr8_1:19089553-19089572 Msa1183730:CDS 25.0%
! ACATAGTACTAAATGTAGTA+TGG + chr8_1:19089903-19089922 Msa1183730:intron 25.0%
!! AACGTAAATCTTTTCATACT+AGG - chr8_1:19090068-19090087 None:intergenic 25.0%
! AACTTTATTGAAATCAATGG+AGG - chr8_1:19090108-19090127 None:intergenic 25.0%
!! GTACATTTAAAACAGTGATA+TGG + chr8_1:19090139-19090158 Msa1183730:intron 25.0%
!!! GTTCTTTTTCTTTGAGAAAA+TGG - chr8_1:19090179-19090198 None:intergenic 25.0%
! TATGTTGATATCAATAAGGA+TGG + chr8_1:19090431-19090450 Msa1183730:CDS 25.0%
! CACATAATTTATACATTAGG+TGG - chr8_1:19090587-19090606 None:intergenic 25.0%
! CACCTAATGTATAAATTATG+TGG + chr8_1:19090585-19090604 Msa1183730:exon 25.0%
! ATACTGAATTGCAATAAGTT+TGG + chr8_1:19090786-19090805 Msa1183730:three_prime_UTR 25.0%
!!! TAGGTTGATTTGTAATGTTT+TGG + chr8_1:19090829-19090848 Msa1183730:three_prime_UTR 25.0%
!!! CGTTATTATGGTTACTTTTA+TGG - chr8_1:19090912-19090931 None:intergenic 25.0%
! TTGCATGTTCTAAATTTGGT+CGG - chr8_1:19084933-19084952 None:intergenic 30.0%
! GAGTTTGCATGTTCTAAATT+TGG - chr8_1:19084937-19084956 None:intergenic 30.0%
GAGATAGATAGAAAGGAAAA+GGG - chr8_1:19085013-19085032 None:intergenic 30.0%
! AATGGAAGTATAAGAGTGAA+AGG + chr8_1:19085100-19085119 Msa1183730:CDS 30.0%
TATAAGAGTGAAAGGAAACA+AGG + chr8_1:19085108-19085127 Msa1183730:CDS 30.0%
! TTTGGGATGAGAATTAACTA+GGG + chr8_1:19085378-19085397 Msa1183730:intron 30.0%
TTCTGAGTTACCTATATCAT+TGG + chr8_1:19085631-19085650 Msa1183730:intron 30.0%
AACATCACAACCAATGATAT+AGG - chr8_1:19085644-19085663 None:intergenic 30.0%
!!! GGTTGTGATGTTTTTTTGAA+TGG + chr8_1:19085652-19085671 Msa1183730:intron 30.0%
ACAGTGTATGCATCATAATT+AGG + chr8_1:19085712-19085731 Msa1183730:intron 30.0%
! GGATCTGTTTTGTATTTTCA+TGG - chr8_1:19085983-19086002 None:intergenic 30.0%
CAAAACAGATCCAAAAAAGA+TGG + chr8_1:19085991-19086010 Msa1183730:intron 30.0%
AAACAGATCCAAAAAAGATG+GGG + chr8_1:19085993-19086012 Msa1183730:intron 30.0%
!!! TCTTAATTCCCCATCTTTTT+TGG - chr8_1:19086004-19086023 None:intergenic 30.0%
TGGGGAATTAAGAAGATATA+AGG + chr8_1:19086011-19086030 Msa1183730:intron 30.0%
CGCACTTCATAAAAATAGAT+TGG + chr8_1:19086075-19086094 Msa1183730:intron 30.0%
AGTGGTTTCATCTTTCAATA+TGG + chr8_1:19086132-19086151 Msa1183730:intron 30.0%
GATTGAAAACATGTGTGAAA+CGG + chr8_1:19086283-19086302 Msa1183730:intron 30.0%
TAGGAATATCAGTATGACTA+GGG - chr8_1:19086625-19086644 None:intergenic 30.0%
ATAGGAATATCAGTATGACT+AGG - chr8_1:19086626-19086645 None:intergenic 30.0%
ATCCACTAATTTAAACCAGT+AGG - chr8_1:19086663-19086682 None:intergenic 30.0%
ATGAAAACAAATGACCAATG+AGG - chr8_1:19086709-19086728 None:intergenic 30.0%
!! TCATTGGTCATTTGTTTTCA+TGG + chr8_1:19086708-19086727 Msa1183730:intron 30.0%
!! GTCATTTGTTTTCATGGATT+AGG + chr8_1:19086714-19086733 Msa1183730:intron 30.0%
!! GATGTTGAAGTTGATAAAGT+TGG + chr8_1:19086836-19086855 Msa1183730:intron 30.0%
TAAAGTTGGGTCAAATTGAT+TGG + chr8_1:19086850-19086869 Msa1183730:intron 30.0%
ACACTATCATTGTAAATGAG+GGG + chr8_1:19086989-19087008 Msa1183730:intron 30.0%
ATAGTATATAGTTGTGAACG+TGG + chr8_1:19087367-19087386 Msa1183730:intron 30.0%
GGATGATAATAATCTAACCA+TGG - chr8_1:19087616-19087635 None:intergenic 30.0%
AGATTATTATCATCCAATGG+TGG + chr8_1:19087621-19087640 Msa1183730:intron 30.0%
GATCAGCTAATATATGCTTT+AGG - chr8_1:19087647-19087666 None:intergenic 30.0%
TTAATTCCAACGAGAAAGTT+TGG - chr8_1:19088041-19088060 None:intergenic 30.0%
GGCATTACCAAAATTCATTT+GGG + chr8_1:19088122-19088141 Msa1183730:intron 30.0%
!! GAACATTATACTGATTTGAG+TGG + chr8_1:19088260-19088279 Msa1183730:intron 30.0%
TTCTTGACACTTATTTCCAT+TGG - chr8_1:19088400-19088419 None:intergenic 30.0%
AAATCCAAAGGAAGGTTAAT+TGG + chr8_1:19088494-19088513 Msa1183730:CDS 30.0%
AATCCAAAGGAAGGTTAATT+GGG + chr8_1:19088495-19088514 Msa1183730:CDS 30.0%
AAGTCAAAGGATTCAAATGT+AGG - chr8_1:19088655-19088674 None:intergenic 30.0%
!! ATCACTTTTCTTGAAGTCAA+AGG - chr8_1:19088668-19088687 None:intergenic 30.0%
TTTGTTAGTGACTGAAGAAT+TGG + chr8_1:19088786-19088805 Msa1183730:intron 30.0%
ACATTTGATAAATTGCAGGA+TGG + chr8_1:19088942-19088961 Msa1183730:intron 30.0%
ACTTGTTCAAACTTGAAAGT+TGG - chr8_1:19089035-19089054 None:intergenic 30.0%
! GTGAGTACTTTTATCTAAAC+TGG - chr8_1:19089318-19089337 None:intergenic 30.0%
! TTTTTCCAGTGTTTGGTTAA+AGG + chr8_1:19089502-19089521 Msa1183730:intron 30.0%
ATTCTATAGTATGGACAATG+CGG - chr8_1:19089543-19089562 None:intergenic 30.0%
TCTCTGCAATAAATACTTGA+AGG - chr8_1:19089732-19089751 None:intergenic 30.0%
CACATAGCAAGAAAATCAAT+AGG - chr8_1:19089836-19089855 None:intergenic 30.0%
! TTGTGATGGAAAGAGATTAT+GGG + chr8_1:19090501-19090520 Msa1183730:CDS 30.0%
GAAAACTTAAAGATGTGAGA+TGG + chr8_1:19090531-19090550 Msa1183730:CDS 30.0%
TTATTGCAAAGACTTAGCTA+TGG + chr8_1:19090756-19090775 Msa1183730:three_prime_UTR 30.0%
AAAGACTTAGCTATGGTATT+TGG + chr8_1:19090763-19090782 Msa1183730:three_prime_UTR 30.0%
AATCAACCTAAGTATCATAC+TGG - chr8_1:19090819-19090838 None:intergenic 30.0%
!!! TGTAATGTTTTGGCATTTAC+TGG + chr8_1:19090839-19090858 Msa1183730:three_prime_UTR 30.0%
CTAAATTTGGTCGGATAGAA+TGG - chr8_1:19084924-19084943 None:intergenic 35.0%
GGAGATAGATAGAAAGGAAA+AGG - chr8_1:19085014-19085033 None:intergenic 35.0%
! TTGCTGTGGAAGATGATTTT+GGG - chr8_1:19085045-19085064 None:intergenic 35.0%
AAACCCAATCACAACAACAA+TGG + chr8_1:19085082-19085101 Msa1183730:CDS 35.0%
! CTTCCATTGTTGTTGTGATT+GGG - chr8_1:19085088-19085107 None:intergenic 35.0%
! ACTTCCATTGTTGTTGTGAT+TGG - chr8_1:19085089-19085108 None:intergenic 35.0%
! ACTTGCTAAGAAAGAGAAGA+AGG + chr8_1:19085156-19085175 Msa1183730:CDS 35.0%
CTTGCTAAGAAAGAGAAGAA+GGG + chr8_1:19085157-19085176 Msa1183730:CDS 35.0%
AAGGTGGTTAAGAGGAATAA+GGG + chr8_1:19085196-19085215 Msa1183730:CDS 35.0%
GGATGAGAATTAACTGCTTT+GGG + chr8_1:19085361-19085380 Msa1183730:intron 35.0%
!! CTTTGGGATGAGAATTAACT+AGG + chr8_1:19085356-19085375 Msa1183730:intron 35.0%
TATTGTGTTGTATACACAGC+CGG + chr8_1:19085511-19085530 Msa1183730:intron 35.0%
GTAGTATATAACTCTGAACG+TGG + chr8_1:19085744-19085763 Msa1183730:intron 35.0%
!! AATGCTTGGTGTCATACTTA+GGG + chr8_1:19085777-19085796 Msa1183730:intron 35.0%
TAACCGAAACTCAAAATGGA+CGG - chr8_1:19085887-19085906 None:intergenic 35.0%
!!! ATTTTCGGTGTCGGTTTATT+CGG + chr8_1:19085906-19085925 Msa1183730:intron 35.0%
TTTATTCGGGTGGTTTGATT+CGG + chr8_1:19085936-19085955 Msa1183730:intron 35.0%
TTGAAGAGCAACACAATCTA+TGG - chr8_1:19086104-19086123 None:intergenic 35.0%
TTGAAAGATGAAACCACTTC+AGG - chr8_1:19086130-19086149 None:intergenic 35.0%
TAAGACATATAGAGAGAGCA+TGG + chr8_1:19086184-19086203 Msa1183730:intron 35.0%
AAGTGAATGAATGACAGTGT+AGG + chr8_1:19086215-19086234 Msa1183730:intron 35.0%
AGTGAATGAATGACAGTGTA+GGG + chr8_1:19086216-19086235 Msa1183730:intron 35.0%
! TATAGTGTTGTCGCTTCATT+TGG - chr8_1:19086382-19086401 None:intergenic 35.0%
ATGAAGCGACAACACTATAA+TGG + chr8_1:19086383-19086402 Msa1183730:intron 35.0%
!! AGCCTACTGGTTTAAATTAG+TGG + chr8_1:19086658-19086677 Msa1183730:intron 35.0%
! ATTAGTGGATATTGTGCTAG+TGG + chr8_1:19086673-19086692 Msa1183730:intron 35.0%
!!! CTTACCTTGTTTTACACAAG+AGG - chr8_1:19087085-19087104 None:intergenic 35.0%
CTCTTGTGTAAAACAAGGTA+AGG + chr8_1:19087083-19087102 Msa1183730:intron 35.0%
! ATGATAGTGTAAAGGGCAAA+GGG - chr8_1:19087183-19087202 None:intergenic 35.0%
! AATGATAGTGTAAAGGGCAA+AGG - chr8_1:19087184-19087203 None:intergenic 35.0%
GTGTATGCAAAGGAATAAGT+AGG + chr8_1:19087338-19087357 Msa1183730:intron 35.0%
AAAGTGTACTATTGTGCTAG+TGG + chr8_1:19087448-19087467 Msa1183730:intron 35.0%
CTTCAAACAAATGACAGATG+AGG - chr8_1:19087484-19087503 None:intergenic 35.0%
CACTCAGTTAAACAAAGTAC+AGG - chr8_1:19087701-19087720 None:intergenic 35.0%
! CTGTACTTTGTTTAACTGAG+TGG + chr8_1:19087699-19087718 Msa1183730:intron 35.0%
TTTGAATGGACAAGTTTCTG+GGG - chr8_1:19087739-19087758 None:intergenic 35.0%
GTTTGAATGGACAAGTTTCT+GGG - chr8_1:19087740-19087759 None:intergenic 35.0%
AGTTTGAATGGACAAGTTTC+TGG - chr8_1:19087741-19087760 None:intergenic 35.0%
TAGCTTATTGCGGAACAATA+AGG - chr8_1:19087859-19087878 None:intergenic 35.0%
GTGTTGTCAATCGTAAACTA+TGG - chr8_1:19087973-19087992 None:intergenic 35.0%
CAACGAGAAAGTTTGGAAAA+CGG - chr8_1:19088034-19088053 None:intergenic 35.0%
CGGCATTACCAAAATTCATT+TGG + chr8_1:19088121-19088140 Msa1183730:intron 35.0%
AACCAGTAATAAAACCAGCA+TGG + chr8_1:19088296-19088315 Msa1183730:CDS 35.0%
!!! TTCCATGCTGGTTTTATTAC+TGG - chr8_1:19088301-19088320 None:intergenic 35.0%
! AAAGAGTATAGCAGTCGTAA+AGG - chr8_1:19088429-19088448 None:intergenic 35.0%
AACGTACATCTCAAATCCAA+AGG + chr8_1:19088482-19088501 Msa1183730:CDS 35.0%
TACATCTCAAATCCAAAGGA+AGG + chr8_1:19088486-19088505 Msa1183730:CDS 35.0%
CTTCAAGAAAAGTGATGTGA+TGG + chr8_1:19088672-19088691 Msa1183730:CDS 35.0%
CGGAACAAATGAAAATCGAT+TGG + chr8_1:19089275-19089294 Msa1183730:intron 35.0%
TTGAATTCCTTGTTCAAGCA+TGG + chr8_1:19089386-19089405 Msa1183730:intron 35.0%
ACAAATTCCATGCTTGAACA+AGG - chr8_1:19089396-19089415 None:intergenic 35.0%
! ACTTCTCTTTTTCCAGTGTT+TGG + chr8_1:19089495-19089514 Msa1183730:intron 35.0%
GTACTAAATGTAGTATGGCA+TGG + chr8_1:19089908-19089927 Msa1183730:intron 35.0%
CTTCATCAATTCCTTTACTG+TGG + chr8_1:19089972-19089991 Msa1183730:intron 35.0%
GAAGGAAAATACCACAGTAA+AGG - chr8_1:19089986-19090005 None:intergenic 35.0%
GAATGACACTAAGATGATGA+AGG - chr8_1:19090004-19090023 None:intergenic 35.0%
TCTGTACAAAGGTAGACATA+CGG - chr8_1:19090302-19090321 None:intergenic 35.0%
TCTTCAGAGTTTCTGTACAA+AGG - chr8_1:19090313-19090332 None:intergenic 35.0%
AAGGATGGTATTCTATGCAT+CGG + chr8_1:19090446-19090465 Msa1183730:CDS 35.0%
CATAATCTCTTTCCATCACA+AGG - chr8_1:19090502-19090521 None:intergenic 35.0%
! CTTGTGATGGAAAGAGATTA+TGG + chr8_1:19090500-19090519 Msa1183730:CDS 35.0%
TTGAGTCCAGTATGATACTT+AGG + chr8_1:19090810-19090829 Msa1183730:three_prime_UTR 35.0%
GAACACACAAAACCAGTTTG+AGG - chr8_1:19084902-19084921 None:intergenic 40.0%
!! GTTTTGGTGAGAGAGAATGA+TGG - chr8_1:19084959-19084978 None:intergenic 40.0%
TAGAAAGGAAAAGGGACTGT+GGG - chr8_1:19085005-19085024 None:intergenic 40.0%
ATAGAAAGGAAAAGGGACTG+TGG - chr8_1:19085006-19085025 None:intergenic 40.0%
!! AAGATGATTTTGGGAGGGTT+GGG - chr8_1:19085036-19085055 None:intergenic 40.0%
!! TGTGGAAGATGATTTTGGGA+GGG - chr8_1:19085041-19085060 None:intergenic 40.0%
!! CTTGCTGTGGAAGATGATTT+TGG - chr8_1:19085046-19085065 None:intergenic 40.0%
GTTGTTGTGATTGGGTTTCT+GGG - chr8_1:19085080-19085099 None:intergenic 40.0%
TGTTGTTGTGATTGGGTTTC+TGG - chr8_1:19085081-19085100 None:intergenic 40.0%
AAGGAAACAAGGAGAATGTG+TGG + chr8_1:19085119-19085138 Msa1183730:CDS 40.0%
AAGAAAGAGAAGAAGGGAAG+AGG + chr8_1:19085163-19085182 Msa1183730:CDS 40.0%
AGAAAGAGAAGAAGGGAAGA+GGG + chr8_1:19085164-19085183 Msa1183730:CDS 40.0%
GAAGTAAGAAGGTGGTTAAG+AGG + chr8_1:19085188-19085207 Msa1183730:CDS 40.0%
GAAGGTGGTTAAGAGGAATA+AGG + chr8_1:19085195-19085214 Msa1183730:CDS 40.0%
AGGAATAAGGGTAAGAAGAG+TGG + chr8_1:19085208-19085227 Msa1183730:CDS 40.0%
! AGTGGTAGAGTTGTTGTTAC+TGG + chr8_1:19085226-19085245 Msa1183730:CDS 40.0%
!! TGTTACTGGTGCTATGTTGA+TGG + chr8_1:19085240-19085259 Msa1183730:CDS 40.0%
TGAAACTGTTCTTCAGACTC+AGG + chr8_1:19085267-19085286 Msa1183730:CDS 40.0%
GGGATGAGAATTAACTGCTT+TGG + chr8_1:19085360-19085379 Msa1183730:intron 40.0%
GTGGAATCATGAAGAATGCT+TGG + chr8_1:19085763-19085782 Msa1183730:intron 40.0%
!! GAATGCTTGGTGTCATACTT+AGG + chr8_1:19085776-19085795 Msa1183730:intron 40.0%
!! ATGCTTGGTGTCATACTTAG+GGG + chr8_1:19085778-19085797 Msa1183730:intron 40.0%
ACTTCACCCATGATTTACCT+CGG - chr8_1:19085850-19085869 None:intergenic 40.0%
AACTCAAAATGGACGGAAGT+GGG - chr8_1:19085880-19085899 None:intergenic 40.0%
AAACTCAAAATGGACGGAAG+TGG - chr8_1:19085881-19085900 None:intergenic 40.0%
!!! CTTCCGTCCATTTTGAGTTT+CGG + chr8_1:19085881-19085900 Msa1183730:intron 40.0%
!! GTTTCGGTTATTTTCGGTGT+CGG + chr8_1:19085897-19085916 Msa1183730:intron 40.0%
! TATTCGGATGGCGGTTTATT+CGG + chr8_1:19085922-19085941 Msa1183730:intron 40.0%
TGAAAACATGTGTGAAACGG+TGG + chr8_1:19086286-19086305 Msa1183730:intron 40.0%
! GTTGTCGCTTCATTTGGTAT+TGG - chr8_1:19086376-19086395 None:intergenic 40.0%
AGCTCACATTACCTTACTCT+CGG + chr8_1:19086427-19086446 Msa1183730:intron 40.0%
!! TCAAGGAAGTGGTTTGCTAT+GGG - chr8_1:19086508-19086527 None:intergenic 40.0%
!! TTCAAGGAAGTGGTTTGCTA+TGG - chr8_1:19086509-19086528 None:intergenic 40.0%
ATTGAATAACCGACCCAAAC+TGG - chr8_1:19086592-19086611 None:intergenic 40.0%
AATATCAGTATGACTAGGGC+TGG - chr8_1:19086621-19086640 None:intergenic 40.0%
GTGGATAATCATTGCCTCAT+TGG + chr8_1:19086692-19086711 Msa1183730:intron 40.0%
!! ATGGATTAGGATAGCGACTA+TGG + chr8_1:19086727-19086746 Msa1183730:intron 40.0%
AGGTTGCTGTCTTCAGATAA+AGG - chr8_1:19086795-19086814 None:intergenic 40.0%
TTGTAAATGAGGGGTAACCT+CGG + chr8_1:19086998-19087017 Msa1183730:intron 40.0%
GTTGTTGTCATGTGACTGTA+AGG + chr8_1:19087034-19087053 Msa1183730:intron 40.0%
TCATGTGACTGTAAGGTCAT+GGG + chr8_1:19087041-19087060 Msa1183730:intron 40.0%
ACAGCCTCTTGTGTAAAACA+AGG + chr8_1:19087078-19087097 Msa1183730:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr8_1:19087109-19087128 Msa1183730:intron 40.0%
TTCCTTTGCATACACTGTCA+GGG - chr8_1:19087333-19087352 None:intergenic 40.0%
ATTCCTTTGCATACACTGTC+AGG - chr8_1:19087334-19087353 None:intergenic 40.0%
GTGGAATCATGAAGAATGCT+TGG + chr8_1:19085763-19085782 Msa1183730:intron 40.0%
! GGCTCTGATTGTGTAAGTAA+AGG + chr8_1:19087577-19087596 Msa1183730:intron 40.0%
! TATATGCTTTAGGCCACCAT+TGG - chr8_1:19087637-19087656 None:intergenic 40.0%
AAATTCCGTTCACGCTATAG+TGG - chr8_1:19087828-19087847 None:intergenic 40.0%
! CGTTTTCCAAACTTTCTCGT+TGG + chr8_1:19088032-19088051 Msa1183730:intron 40.0%
! CCTTTTCTACAGTTTAGTGC+AGG - chr8_1:19088222-19088241 None:intergenic 40.0%
CCTGCACTAAACTGTAGAAA+AGG + chr8_1:19088219-19088238 Msa1183730:intron 40.0%
ATTTGAGTGGACACTCTTTC+AGG + chr8_1:19088273-19088292 Msa1183730:intron 40.0%
AGTCTCAGTGGAATTTGGAA+AGG + chr8_1:19088334-19088353 Msa1183730:CDS 40.0%
! AGTGGAATTTGGAAAGGTGT+AGG + chr8_1:19088340-19088359 Msa1183730:CDS 40.0%
TTCTCCAATCACTGCTGAAA+TGG + chr8_1:19088372-19088391 Msa1183730:CDS 40.0%
CTATACTCTTTCCCGTATAG+AGG + chr8_1:19088438-19088457 Msa1183730:CDS 40.0%
TCACCCAATTAACCTTCCTT+TGG - chr8_1:19088501-19088520 None:intergenic 40.0%
TGGGTGACTTTGAATCCTTA+TGG + chr8_1:19088514-19088533 Msa1183730:CDS 40.0%
GACAATGGCATAGCTAAGAA+TGG + chr8_1:19088559-19088578 Msa1183730:CDS 40.0%
!! TATAGGAGCTTTAAGATCCC+CGG - chr8_1:19088587-19088606 None:intergenic 40.0%
GATCTTAAAGCTCCTATAGC+CGG + chr8_1:19088589-19088608 Msa1183730:CDS 40.0%
ATCTTAAAGCTCCTATAGCC+GGG + chr8_1:19088590-19088609 Msa1183730:CDS 40.0%
! TGTGATGGAAGAAGATGTCA+TGG + chr8_1:19088687-19088706 Msa1183730:CDS 40.0%
! GTGATGGAAGAAGATGTCAT+GGG + chr8_1:19088688-19088707 Msa1183730:CDS 40.0%
ACTTCAAAGTAAACAAGGCC+CGG - chr8_1:19088721-19088740 None:intergenic 40.0%
CAATCAACGGTAGTTTATGC+TGG - chr8_1:19088882-19088901 None:intergenic 40.0%
TGCAGGATGGATCTTATTCT+AGG + chr8_1:19088955-19088974 Msa1183730:intron 40.0%
GCAGGATGGATCTTATTCTA+GGG + chr8_1:19088956-19088975 Msa1183730:intron 40.0%
CAGGATGGATCTTATTCTAG+GGG + chr8_1:19088957-19088976 Msa1183730:intron 40.0%
GTCTGTGTCATCGTTTCATA+GGG - chr8_1:19089103-19089122 None:intergenic 40.0%
AGTCTGTGTCATCGTTTCAT+AGG - chr8_1:19089104-19089123 None:intergenic 40.0%
!! TATTTGTTGGTGTTGGACCT+CGG + chr8_1:19089141-19089160 Msa1183730:intron 40.0%
TTGCTGTGTATGAAGAGGAA+TGG + chr8_1:19089599-19089618 Msa1183730:CDS 40.0%
TGCTGTGTATGAAGAGGAAT+GGG + chr8_1:19089600-19089619 Msa1183730:CDS 40.0%
CTCATGTCATCAACACAAGT+AGG - chr8_1:19089631-19089650 None:intergenic 40.0%
!! CTACTTGTGTTGATGACATG+AGG + chr8_1:19089629-19089648 Msa1183730:CDS 40.0%
TAAGAACATGCACACACCAA+AGG - chr8_1:19089935-19089954 None:intergenic 40.0%
! GTACAGAAACTCTGAAGAAG+AGG + chr8_1:19090315-19090334 Msa1183730:CDS 40.0%
TGCAGGATATGACCATTCTA+TGG + chr8_1:19090387-19090406 Msa1183730:CDS 40.0%
TATGACCATTCTATGGCTTC+CGG + chr8_1:19090394-19090413 Msa1183730:CDS 40.0%
TGAAGGAATCAACCTTGTGA+TGG + chr8_1:19090487-19090506 Msa1183730:CDS 40.0%
GATGGAAAGAGATTATGGGT+TGG + chr8_1:19090505-19090524 Msa1183730:CDS 40.0%
!! GAAAGAGATTATGGGTTGGA+TGG + chr8_1:19090509-19090528 Msa1183730:CDS 40.0%
GGAAATCAGAGATGAAGAGA+AGG + chr8_1:19090552-19090571 Msa1183730:CDS 40.0%
AATCAGAGATGAAGAGAAGG+TGG + chr8_1:19090555-19090574 Msa1183730:CDS 40.0%
! CAGTTTGAGGTTCGCAAGTA+CGG - chr8_1:19084889-19084908 None:intergenic 45.0%
GGTTGGGGAGATAGATAGAA+AGG - chr8_1:19085020-19085039 None:intergenic 45.0%
!! AGATGATTTTGGGAGGGTTG+GGG - chr8_1:19085035-19085054 None:intergenic 45.0%
!! GAAGATGATTTTGGGAGGGT+TGG - chr8_1:19085037-19085056 None:intergenic 45.0%
! CTGTGGAAGATGATTTTGGG+AGG - chr8_1:19085042-19085061 None:intergenic 45.0%
AAGAGGGAGAAGTAAGAAGG+TGG + chr8_1:19085180-19085199 Msa1183730:CDS 45.0%
! CATGATTTACCTCGGATTGG+GGG - chr8_1:19085842-19085861 None:intergenic 45.0%
CCATGATTTACCTCGGATTG+GGG - chr8_1:19085843-19085862 None:intergenic 45.0%
CCCATGATTTACCTCGGATT+GGG - chr8_1:19085844-19085863 None:intergenic 45.0%
CCCAATCCGAGGTAAATCAT+GGG + chr8_1:19085841-19085860 Msa1183730:intron 45.0%
ACCCATGATTTACCTCGGAT+TGG - chr8_1:19085845-19085864 None:intergenic 45.0%
! ATTCGGATGGCGGTTTATTC+GGG + chr8_1:19085923-19085942 Msa1183730:intron 45.0%
TGCTCTTCAAGAACCTGAAG+TGG + chr8_1:19086114-19086133 Msa1183730:intron 45.0%
CACATTACCTTACTCTCGGT+CGG + chr8_1:19086431-19086450 Msa1183730:intron 45.0%
! GGTTGGAGTAATTTGCCCAA+CGG - chr8_1:19086467-19086486 None:intergenic 45.0%
! TTGCTATGGGTTGCAATGGT+CGG - chr8_1:19086495-19086514 None:intergenic 45.0%
!! TGGTTTGCTATGGGTTGCAA+TGG - chr8_1:19086499-19086518 None:intergenic 45.0%
AACGGTTTAAGCGGTTTCAG+CGG - chr8_1:19086532-19086551 None:intergenic 45.0%
GTCATGTGACTGTAAGGTCA+TGG + chr8_1:19087040-19087059 Msa1183730:intron 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - chr8_1:19087074-19087093 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr8_1:19087105-19087124 Msa1183730:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr8_1:19087108-19087127 Msa1183730:intron 45.0%
TAGGCTCACTCATAACGCAT+AGG - chr8_1:19087421-19087440 None:intergenic 45.0%
AAGGAACACGAACAAAGCCA+TGG + chr8_1:19087596-19087615 Msa1183730:intron 45.0%
TAGCACCACTATAGCGTGAA+CGG + chr8_1:19087820-19087839 Msa1183730:intron 45.0%
ACTGTTGCGTAGTACTGTAG+CGG + chr8_1:19087925-19087944 Msa1183730:intron 45.0%
CTAGCAAATGTGTTCCATGC+TGG - chr8_1:19088313-19088332 None:intergenic 45.0%
! ACATTTGCTAGCAGTCTCAG+TGG + chr8_1:19088322-19088341 Msa1183730:CDS 45.0%
CTAGCAGTCTCAGTGGAATT+TGG + chr8_1:19088329-19088348 Msa1183730:CDS 45.0%
TGTTGCGGCATTTCACCATA+AGG - chr8_1:19088532-19088551 None:intergenic 45.0%
!! CCATTGTCTTCAGCTTGTTG+CGG - chr8_1:19088547-19088566 None:intergenic 45.0%
GGCATAGCTAAGAATGGTTC+CGG + chr8_1:19088565-19088584 Msa1183730:CDS 45.0%
GCATAGCTAAGAATGGTTCC+GGG + chr8_1:19088566-19088585 Msa1183730:CDS 45.0%
CATAGCTAAGAATGGTTCCG+GGG + chr8_1:19088567-19088586 Msa1183730:CDS 45.0%
CACCCACTGAAATATCCACA+GGG - chr8_1:19088983-19089002 None:intergenic 45.0%
GTGTCATCGTTTCATAGGGA+AGG - chr8_1:19089099-19089118 None:intergenic 45.0%
TGGTTAAAGGCTGCCACAAA+AGG + chr8_1:19089515-19089534 Msa1183730:CDS 45.0%
GAGAGTTGCTGTGTATGAAG+AGG + chr8_1:19089594-19089613 Msa1183730:CDS 45.0%
GTCATCAACACAAGTAGGAC+TGG - chr8_1:19089626-19089645 None:intergenic 45.0%
TGTAGTATGGCATGGACCTT+TGG + chr8_1:19089916-19089935 Msa1183730:intron 45.0%
ACCAATCCATCAGAGTTGAC+AGG + chr8_1:19090197-19090216 Msa1183730:CDS 45.0%
CCAATCCATCAGAGTTGACA+GGG + chr8_1:19090198-19090217 Msa1183730:CDS 45.0%
!! CTTTGAAATCAGCGCTACTC+CGG + chr8_1:19090232-19090251 Msa1183730:CDS 45.0%
GAGACTAAAGCGGAAGAAGA+AGG + chr8_1:19090266-19090285 Msa1183730:CDS 45.0%
ACAAAGGTAGACATACGGAG+CGG - chr8_1:19090297-19090316 None:intergenic 45.0%
CCAAAGTAGTTGGCACTATC+CGG - chr8_1:19090347-19090366 None:intergenic 45.0%
ATGACCATTCTATGGCTTCC+GGG + chr8_1:19090395-19090414 Msa1183730:CDS 45.0%
ACATAACATGTCACACCTCC+CGG - chr8_1:19090416-19090435 None:intergenic 45.0%
GGTATTCTATGCATCGGAGT+TGG + chr8_1:19090452-19090471 Msa1183730:CDS 45.0%
ACTGGTTATGCAATGCACCT+AGG + chr8_1:19090857-19090876 Msa1183730:three_prime_UTR 45.0%
CGTACTTGCGAACCTCAAAC+TGG + chr8_1:19084887-19084906 Msa1183730:five_prime_UTR 50.0%
! GAGTGTGTGGAGGAAGGTTT+TGG - chr8_1:19084975-19084994 None:intergenic 50.0%
! TGAAGAGAGTGTGTGGAGGA+AGG - chr8_1:19084981-19085000 None:intergenic 50.0%
! TGTGGGTTGAAGAGAGTGTG+TGG - chr8_1:19084988-19085007 None:intergenic 50.0%
GGCTGTGATGATTCTTGCTG+TGG - chr8_1:19085059-19085078 None:intergenic 50.0%
GGGAAGAGGGAGAAGTAAGA+AGG + chr8_1:19085177-19085196 Msa1183730:CDS 50.0%
!! CTTGGTGTCATACTTAGGGG+TGG + chr8_1:19085781-19085800 Msa1183730:intron 50.0%
TCATACTTAGGGGTGGACGT+CGG + chr8_1:19085788-19085807 Msa1183730:intron 50.0%
CCCCAATCCGAGGTAAATCA+TGG + chr8_1:19085840-19085859 Msa1183730:intron 50.0%
!! TCGGTGTCGGTTTATTCGGA+TGG + chr8_1:19085910-19085929 Msa1183730:intron 50.0%
!! GTGTCGGTTTATTCGGATGG+CGG + chr8_1:19085913-19085932 Msa1183730:intron 50.0%
! CCTTACTCTCGGTCGGTTTA+CGG + chr8_1:19086438-19086457 Msa1183730:intron 50.0%
! CTTACTCTCGGTCGGTTTAC+GGG + chr8_1:19086439-19086458 Msa1183730:intron 50.0%
TGCAATGGTCGGTTATGGGT+TGG - chr8_1:19086484-19086503 None:intergenic 50.0%
GGGTTGCAATGGTCGGTTAT+GGG - chr8_1:19086488-19086507 None:intergenic 50.0%
TGGGTTGCAATGGTCGGTTA+TGG - chr8_1:19086489-19086508 None:intergenic 50.0%
GTTTCAGCGGTTCAAGGAAG+TGG - chr8_1:19086519-19086538 None:intergenic 50.0%
TAAGCGGTTTCAGCGGTTCA+AGG - chr8_1:19086525-19086544 None:intergenic 50.0%
GCTGAAACCGCTTAAACCGT+TGG + chr8_1:19086531-19086550 Msa1183730:intron 50.0%
! TAGGCTCACTCAGAAGGCAT+AGG - chr8_1:19086644-19086663 None:intergenic 50.0%
AACCAGTAGGCTCACTCAGA+AGG - chr8_1:19086650-19086669 None:intergenic 50.0%
CAACTTTACTAGTTGCGCCG+AGG - chr8_1:19087018-19087037 None:intergenic 50.0%
AAGGTCATGGGTTCAAGTCC+TGG + chr8_1:19087053-19087072 Msa1183730:intron 50.0%
GCATACACTGTCAGGGCAAA+AGG - chr8_1:19087326-19087345 None:intergenic 50.0%
TGCCCTGACAGTGTATGCAA+AGG + chr8_1:19087328-19087347 Msa1183730:intron 50.0%
GGCTCCATTTCAGCAGTGAT+TGG - chr8_1:19088379-19088398 None:intergenic 50.0%
CACTGCTGAAATGGAGCCAA+TGG + chr8_1:19088381-19088400 Msa1183730:CDS 50.0%
GTACGTTCATCCGAATGCGA+CGG - chr8_1:19088469-19088488 None:intergenic 50.0%
CCGCAACAAGCTGAAGACAA+TGG + chr8_1:19088544-19088563 Msa1183730:CDS 50.0%
! AGATGTCATGGGCTGTGAAC+CGG + chr8_1:19088699-19088718 Msa1183730:CDS 50.0%
! ATCTTATTCTAGGGGCCCTG+TGG + chr8_1:19088965-19088984 Msa1183730:CDS 50.0%
GGCCCTGTGGATATTTCAGT+GGG + chr8_1:19088978-19088997 Msa1183730:CDS 50.0%
GCACCCACTGAAATATCCAC+AGG - chr8_1:19088984-19089003 None:intergenic 50.0%
GTTGCTACTGACACCACAGA+AGG - chr8_1:19089175-19089194 None:intergenic 50.0%
ATGGCATGCGGGAGAAAACT+GGG - chr8_1:19089235-19089254 None:intergenic 50.0%
TATGGCATGCGGGAGAAAAC+TGG - chr8_1:19089236-19089255 None:intergenic 50.0%
GGCAGCCTTTAACCAAACAC+TGG - chr8_1:19089510-19089529 None:intergenic 50.0%
! GGACAATGCGGATCCTTTTG+TGG - chr8_1:19089531-19089550 None:intergenic 50.0%
! CCCTGTCAACTCTGATGGAT+TGG - chr8_1:19090201-19090220 None:intergenic 50.0%
CATGACCCTGTCAACTCTGA+TGG - chr8_1:19090206-19090225 None:intergenic 50.0%
CATCAGAGTTGACAGGGTCA+TGG + chr8_1:19090204-19090223 Msa1183730:CDS 50.0%
TTAGTCTCCTCCCCATAGAC+CGG - chr8_1:19090254-19090273 None:intergenic 50.0%
CTATGGGGAGGAGACTAAAG+CGG + chr8_1:19090256-19090275 Msa1183730:CDS 50.0%
CCGGATAGTGCCAACTACTT+TGG + chr8_1:19090344-19090363 Msa1183730:CDS 50.0%
TAGTGCCAACTACTTTGGCG+AGG + chr8_1:19090349-19090368 Msa1183730:CDS 50.0%
TTCTATGCATCGGAGTTGGC+TGG + chr8_1:19090456-19090475 Msa1183730:CDS 50.0%
GTTGGCTGGTACTCTGATGA+AGG + chr8_1:19090470-19090489 Msa1183730:CDS 50.0%
GGTTATGCAATGCACCTAGG+TGG + chr8_1:19090860-19090879 Msa1183730:three_prime_UTR 50.0%
! GGGTTGAAGAGAGTGTGTGG+AGG - chr8_1:19084985-19085004 None:intergenic 55.0%
CCGTAAACCGACCGAGAGTA+AGG - chr8_1:19086441-19086460 None:intergenic 55.0%
! GTCGGTTTACGGGTTCCGTT+GGG + chr8_1:19086449-19086468 Msa1183730:intron 55.0%
GTCGGGTCCAACGGTTTAAG+CGG - chr8_1:19086541-19086560 None:intergenic 55.0%
!! CCATTCGGTTCGGCCAGTTT+GGG + chr8_1:19086576-19086595 Msa1183730:intron 55.0%
TGCCTTCTGAGTGAGCCTAC+TGG + chr8_1:19086645-19086664 Msa1183730:intron 55.0%
CTAGAGCTCCCGCATATGCA+GGG - chr8_1:19087148-19087167 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG - chr8_1:19087149-19087168 None:intergenic 55.0%
GTAAAGGGCAAAGGGCAACC+CGG - chr8_1:19087175-19087194 None:intergenic 55.0%
! GATTTTCGCAGCCCGGCTAT+AGG - chr8_1:19088604-19088623 None:intergenic 55.0%
ATAGCCGGGCTGCGAAAATC+CGG + chr8_1:19088604-19088623 Msa1183730:CDS 55.0%
! TTCACCGGATTTTCGCAGCC+CGG - chr8_1:19088611-19088630 None:intergenic 55.0%
! GATGTCATGGGCTGTGAACC+GGG + chr8_1:19088700-19088719 Msa1183730:CDS 55.0%
GGGCCCTGTGGATATTTCAG+TGG + chr8_1:19088977-19088996 Msa1183730:CDS 55.0%
!! TTGGTGTTGGACCTCGGACA+CGG + chr8_1:19089147-19089166 Msa1183730:intron 55.0%
ATGCGGGAGAAAACTGGGGA+GGG - chr8_1:19089230-19089249 None:intergenic 55.0%
TGGCATGCGGGAGAAAACTG+GGG - chr8_1:19089234-19089253 None:intergenic 55.0%
ATCAGCGCTACTCCGGTCTA+TGG + chr8_1:19090239-19090258 Msa1183730:CDS 55.0%
TCAGCGCTACTCCGGTCTAT+GGG + chr8_1:19090240-19090259 Msa1183730:CDS 55.0%
TCTGAAGAAGAGGAGCTCGC+CGG + chr8_1:19090325-19090344 Msa1183730:CDS 55.0%
TGCCAACTACTTTGGCGAGG+AGG + chr8_1:19090352-19090371 Msa1183730:CDS 55.0%
CTCCTCCTCGCCAAAGTAGT+TGG - chr8_1:19090357-19090376 None:intergenic 55.0%
ACTACTTTGGCGAGGAGGAG+AGG + chr8_1:19090357-19090376 Msa1183730:CDS 55.0%
ACCATTCTATGGCTTCCGGG+AGG + chr8_1:19090398-19090417 Msa1183730:CDS 55.0%
ACCTCCCGGAAGCCATAGAA+TGG - chr8_1:19090402-19090421 None:intergenic 55.0%
CTTACAAGCTGCGACCACCT+AGG - chr8_1:19090877-19090896 None:intergenic 55.0%
ACTTAGGGGTGGACGTCGGT+CGG + chr8_1:19085792-19085811 Msa1183730:intron 60.0%
GGGTGAAAACCCCCAATCCG+AGG + chr8_1:19085830-19085849 Msa1183730:intron 60.0%
! CGGATGGCGGTTTATTCGGG+TGG + chr8_1:19085926-19085945 Msa1183730:intron 60.0%
! GGTCGGTTTACGGGTTCCGT+TGG + chr8_1:19086448-19086467 Msa1183730:intron 60.0%
ACGCTTCGGGCCATTCGGTT+CGG + chr8_1:19086566-19086585 Msa1183730:intron 60.0%
!! GCCATTCGGTTCGGCCAGTT+TGG + chr8_1:19086575-19086594 Msa1183730:intron 60.0%
CCCAAACTGGCCGAACCGAA+TGG - chr8_1:19086579-19086598 None:intergenic 60.0%
!! TCGGTTCGGCCAGTTTGGGT+CGG + chr8_1:19086580-19086599 Msa1183730:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr8_1:19087121-19087140 Msa1183730:intron 60.0%
CATATGCAGGGACCGGGAAG+GGG - chr8_1:19087136-19087155 None:intergenic 60.0%
GCATATGCAGGGACCGGGAA+GGG - chr8_1:19087137-19087156 None:intergenic 60.0%
CTTCCCGGTCCCTGCATATG+CGG + chr8_1:19087136-19087155 Msa1183730:intron 60.0%
TTCCCGGTCCCTGCATATGC+GGG + chr8_1:19087137-19087156 Msa1183730:intron 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG + chr8_1:19087153-19087172 Msa1183730:intron 60.0%
CGACGGCACTGCCTCTATAC+GGG - chr8_1:19088452-19088471 None:intergenic 60.0%
GCGACGGCACTGCCTCTATA+CGG - chr8_1:19088453-19088472 None:intergenic 60.0%
AGAGGCAGTGCCGTCGCATT+CGG + chr8_1:19088456-19088475 Msa1183730:CDS 60.0%
CACAGAAGGATCCGTGTCCG+AGG - chr8_1:19089161-19089180 None:intergenic 60.0%
CTCGGACACGGATCCTTCTG+TGG + chr8_1:19089159-19089178 Msa1183730:intron 60.0%
TGCGGGAGAAAACTGGGGAG+GGG - chr8_1:19089229-19089248 None:intergenic 60.0%
CATGCGGGAGAAAACTGGGG+AGG - chr8_1:19089231-19089250 None:intergenic 60.0%
CAGCGCTACTCCGGTCTATG+GGG + chr8_1:19090241-19090260 Msa1183730:CDS 60.0%
GGAGGAGAGGCTTGACATGC+AGG + chr8_1:19090370-19090389 Msa1183730:CDS 60.0%
CTTAGGGGTGGACGTCGGTC+GGG + chr8_1:19085793-19085812 Msa1183730:intron 65.0%
GGTCGGGCACGGTCGGATTT+CGG + chr8_1:19085809-19085828 Msa1183730:intron 65.0%
GTCGGGCACGGTCGGATTTC+GGG + chr8_1:19085810-19085829 Msa1183730:intron 65.0%
CGAATGGCCCGAAGCGTGTC+GGG - chr8_1:19086563-19086582 None:intergenic 65.0%
CCGAATGGCCCGAAGCGTGT+CGG - chr8_1:19086564-19086583 None:intergenic 65.0%
CCGACACGCTTCGGGCCATT+CGG + chr8_1:19086561-19086580 Msa1183730:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr8_1:19087123-19087142 None:intergenic 65.0%
CGCATATGCAGGGACCGGGA+AGG - chr8_1:19087138-19087157 None:intergenic 65.0%
CTCCCGCATATGCAGGGACC+GGG - chr8_1:19087142-19087161 None:intergenic 65.0%
GCTCCCGCATATGCAGGGAC+CGG - chr8_1:19087143-19087162 None:intergenic 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG + chr8_1:19087154-19087173 Msa1183730:intron 65.0%
GCGGGAGAAAACTGGGGAGG+GGG - chr8_1:19089228-19089247 None:intergenic 65.0%
CGCTACTCCGGTCTATGGGG+AGG + chr8_1:19090244-19090263 Msa1183730:CDS 65.0%
GCGTGTCGGGTCGGGTCCAA+CGG - chr8_1:19086550-19086569 None:intergenic 70.0%
GGACCCGACCCGACACGCTT+CGG + chr8_1:19086552-19086571 Msa1183730:intron 70.0%
GACCCGACCCGACACGCTTC+GGG + chr8_1:19086553-19086572 Msa1183730:intron 70.0%
TGGCCCGAAGCGTGTCGGGT+CGG - chr8_1:19086559-19086578 None:intergenic 70.0%
GGGTGGACGTCGGTCGGGCA+CGG + chr8_1:19085798-19085817 Msa1183730:intron 75.0%
GGACGTCGGTCGGGCACGGT+CGG + chr8_1:19085802-19085821 Msa1183730:intron 75.0%
GGCCCGAAGCGTGTCGGGTC+GGG - chr8_1:19086558-19086577 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 19084871 19090933 19084871 ID=Msa1183730;Name=Msa1183730
chr8_1 mRNA 19084871 19090933 19084871 ID=Msa1183730-mRNA-1;Parent=Msa1183730;Name=Msa1183730-mRNA-1;_AED=0.01;_eAED=0.01;_QI=76|1|1|1|1|1|5|335|487
chr8_1 exon 19084871 19085288 19084871 ID=Msa1183730-mRNA-1:exon:7363;Parent=Msa1183730-mRNA-1
chr8_1 exon 19088295 19088738 19088295 ID=Msa1183730-mRNA-1:exon:7364;Parent=Msa1183730-mRNA-1
chr8_1 exon 19088960 19089052 19088960 ID=Msa1183730-mRNA-1:exon:7365;Parent=Msa1183730-mRNA-1
chr8_1 exon 19089511 19089650 19089511 ID=Msa1183730-mRNA-1:exon:7366;Parent=Msa1183730-mRNA-1
chr8_1 exon 19090154 19090933 19090154 ID=Msa1183730-mRNA-1:exon:7367;Parent=Msa1183730-mRNA-1
chr8_1 five_prime_UTR 19084871 19084946 19084871 ID=Msa1183730-mRNA-1:five_prime_utr;Parent=Msa1183730-mRNA-1
chr8_1 CDS 19084947 19085288 19084947 ID=Msa1183730-mRNA-1:cds;Parent=Msa1183730-mRNA-1
chr8_1 CDS 19088295 19088738 19088295 ID=Msa1183730-mRNA-1:cds;Parent=Msa1183730-mRNA-1
chr8_1 CDS 19088960 19089052 19088960 ID=Msa1183730-mRNA-1:cds;Parent=Msa1183730-mRNA-1
chr8_1 CDS 19089511 19089650 19089511 ID=Msa1183730-mRNA-1:cds;Parent=Msa1183730-mRNA-1
chr8_1 CDS 19090154 19090598 19090154 ID=Msa1183730-mRNA-1:cds;Parent=Msa1183730-mRNA-1
chr8_1 three_prime_UTR 19090599 19090933 19090599 ID=Msa1183730-mRNA-1:three_prime_utr;Parent=Msa1183730-mRNA-1
Gene Sequence

>Msa1183730

ATGCAAACTCCATCATTCTCTCTCACCAAAACCTTCCTCCACACACTCTCTTCAACCCACAGTCCCTTTTCCTTTCTATCTATCTCCCCAACCCTCCCAAAATCATCTTCCACAGCAAGAATCATCACAGCCCAGAAACCCAATCACAACAACAATGGAAGTATAAGAGTGAAAGGAAACAAGGAGAATGTGTGGAGTGTTGATAATGAACTTGCTAAGAAAGAGAAGAAGGGAAGAGGGAGAAGTAAGAAGGTGGTTAAGAGGAATAAGGGTAAGAAGAGTGGTAGAGTTGTTGTTACTGGTGCTATGTTGATGGAAGTTGAAACTGTTCTTCAGACTCAGGAACCAGTAATAAAACCAGCATGGAACACATTTGCTAGCAGTCTCAGTGGAATTTGGAAAGGTGTAGGTGCTGTTTTTTCTCCAATCACTGCTGAAATGGAGCCAATGGAAATAAGTGTCAAGAATGAAAACCTTTACGACTGCTATACTCTTTCCCGTATAGAGGCAGTGCCGTCGCATTCGGATGAACGTACATCTCAAATCCAAAGGAAGGTTAATTGGGTGACTTTGAATCCTTATGGTGAAATGCCGCAACAAGCTGAAGACAATGGCATAGCTAAGAATGGTTCCGGGGATCTTAAAGCTCCTATAGCCGGGCTGCGAAAATCCGGTGAAAAAATAACAAATCGTGTTTTGCCTACATTTGAATCCTTTGACTTCAAGAAAAGTGATGTGATGGAAGAAGATGTCATGGGCTGTGAACCGGGCCTTGTTTACTTTGAAGATGGATCTTATTCTAGGGGCCCTGTGGATATTTCAGTGGGTGCAGATGATGATTCAAAGTACTATATCACACCAACTTTCAAGTTTGAACAATGTTTGGTTAAAGGCTGCCACAAAAGGATCCGCATTGTCCATACTATAGAATTCATAAATGGCGGTTCAGAAATACAGATAATGAGAGTTGCTGTGTATGAAGAGGAATGGGCCAGTCCTACTTGTGTTGATGACATGAGTGATATGGACTTTGATTTAAAGCCATTTTCTCAAAGAAAAAGAACCAATCCATCAGAGTTGACAGGGTCATGGAAAGTCTTTGAAATCAGCGCTACTCCGGTCTATGGGGAGGAGACTAAAGCGGAAGAAGAAGGCAATACCGCTCCGTATGTCTACCTTTGTACAGAAACTCTGAAGAAGAGGAGCTCGCCGGATAGTGCCAACTACTTTGGCGAGGAGGAGAGGCTTGACATGCAGGATATGACCATTCTATGGCTTCCGGGAGGTGTGACATGTTATGTTGATATCAATAAGGATGGTATTCTATGCATCGGAGTTGGCTGGTACTCTGATGAAGGAATCAACCTTGTGATGGAAAGAGATTATGGGTTGGATGGAAAACTTAAAGATGTGAGATGGAAATCAGAGATGAAGAGAAGGTGGTCTAATCCACCTAATGTATAA

Protein sequence

>Msa1183730

MQTPSFSLTKTFLHTLSSTHSPFSFLSISPTLPKSSSTARIITAQKPNHNNNGSIRVKGNKENVWSVDNELAKKEKKGRGRSKKVVKRNKGKKSGRVVVTGAMLMEVETVLQTQEPVIKPAWNTFASSLSGIWKGVGAVFSPITAEMEPMEISVKNENLYDCYTLSRIEAVPSHSDERTSQIQRKVNWVTLNPYGEMPQQAEDNGIAKNGSGDLKAPIAGLRKSGEKITNRVLPTFESFDFKKSDVMEEDVMGCEPGLVYFEDGSYSRGPVDISVGADDDSKYYITPTFKFEQCLVKGCHKRIRIVHTIEFINGGSEIQIMRVAVYEEEWASPTCVDDMSDMDFDLKPFSQRKRTNPSELTGSWKVFEISATPVYGEETKAEEEGNTAPYVYLCTETLKKRSSPDSANYFGEEERLDMQDMTILWLPGGVTCYVDINKDGILCIGVGWYSDEGINLVMERDYGLDGKLKDVRWKSEMKRRWSNPPNV*