AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0341260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0341260 MtrunA17_Chr2g0333221 97.586 497 11 1 1 497 1 496 0.0 989
Msa0341260 MtrunA17_Chr6g0478651 46.413 446 228 5 39 480 33 471 5.30e-131 390
Msa0341260 MtrunA17_Chr3g0123861 49.497 398 185 5 35 426 41 428 9.03e-129 381
Msa0341260 MtrunA17_Chr4g0010781 35.897 351 207 6 72 420 87 421 1.82e-58 199
Msa0341260 MtrunA17_Chr5g0426951 35.467 375 218 7 59 424 64 423 3.84e-58 199
Msa0341260 MtrunA17_Chr3g0087741 32.240 366 209 8 69 423 87 424 7.70e-55 190
Msa0341260 MtrunA17_Chr8g0334811 34.857 350 203 9 69 409 12 345 5.47e-51 179
Msa0341260 MtrunA17_Chr2g0322181 29.867 375 232 10 56 421 3 355 1.46e-32 128
Msa0341260 MtrunA17_Chr4g0025401 29.867 375 230 10 56 421 3 353 9.10e-31 123
Msa0341260 MtrunA17_Chr7g0269841 27.500 360 205 10 68 417 23 336 2.15e-28 115
Msa0341260 MtrunA17_Chr4g0040501 28.042 378 212 12 71 425 4 344 4.07e-25 106
Msa0341260 MtrunA17_Chr2g0282741 48.624 109 40 3 71 163 4 112 3.03e-21 94.7
Msa0341260 MtrunA17_Chr2g0324921 42.609 115 44 3 71 163 4 118 8.47e-18 84.7
Msa0341260 MtrunA17_Chr2g0282761 56.000 75 31 1 71 143 4 78 1.08e-17 84.3
Msa0341260 MtrunA17_Chr7g0242951 54.286 70 32 0 67 136 23 92 3.49e-17 84.3
Msa0341260 MtrunA17_Chr3g0138471 41.818 110 58 2 71 174 4 113 8.63e-17 81.6
Msa0341260 MtrunA17_Chr4g0006391 42.727 110 46 3 71 163 4 113 1.63e-16 80.9
Msa0341260 MtrunA17_Chr2g0295821 43.137 102 52 1 70 165 103 204 4.20e-16 79.7
Msa0341260 MtrunA17_Chr7g0253281 53.968 63 29 0 71 133 54 116 1.85e-15 77.0
Msa0341260 MtrunA17_Chr6g0460411 45.349 86 36 2 71 150 2 82 2.13e-14 72.4
Msa0341260 MtrunA17_Chr6g0460461 45.349 86 36 2 71 150 2 82 2.29e-14 72.4
Msa0341260 MtrunA17_Chr2g0295831 50.000 64 32 0 70 133 109 172 3.52e-14 72.0
Msa0341260 MtrunA17_Chr5g0415731 40.594 101 51 2 71 162 5 105 4.23e-14 69.7
Msa0341260 MtrunA17_Chr7g0263971 55.385 65 27 1 71 133 369 433 4.98e-14 74.3
Msa0341260 MtrunA17_Chr1g0159491 44.595 74 40 1 71 143 6 79 2.28e-13 65.5
Msa0341260 MtrunA17_Chr5g0393371 38.889 108 62 3 70 173 5 112 5.06e-13 70.9
Msa0341260 MtrunA17_Chr6g0460381 45.588 68 31 1 71 132 3 70 5.85e-13 67.8
Msa0341260 MtrunA17_Chr4g0021141 44.578 83 37 2 62 135 5 87 5.93e-13 66.2
Msa0341260 MtrunA17_Chr3g0093111 32.075 159 66 4 71 187 2 160 1.02e-12 68.9
Msa0341260 MtrunA17_Chr2g0328581 50.000 70 34 1 73 142 77 145 2.02e-12 66.2
Msa0341260 MtrunA17_Chr8g0378161 39.744 78 44 1 65 139 54 131 2.88e-12 65.5
Msa0341260 MtrunA17_Chr5g0399201 40.741 81 44 1 71 147 12 92 4.26e-12 68.6
Msa0341260 MtrunA17_Chr1g0209551 48.571 70 35 1 67 135 12 81 4.40e-12 67.8
Msa0341260 MtrunA17_Chr3g0091361 47.297 74 37 1 69 140 3 76 5.08e-12 65.1
Msa0341260 MtrunA17_Chr5g0414471 48.611 72 36 1 71 141 25 96 5.40e-12 67.8
Msa0341260 MtrunA17_Chr5g0405521 49.231 65 30 1 72 133 73 137 6.57e-12 63.9
Msa0341260 MtrunA17_Chr5g0405501 45.070 71 36 1 66 133 66 136 7.85e-12 63.5
Msa0341260 MtrunA17_Chr8g0371891 50.000 64 29 1 73 133 49 112 1.49e-11 62.4
Msa0341260 MtrunA17_Chr1g0159511 37.755 98 53 2 70 166 5 95 3.63e-11 64.7
Msa0341260 MtrunA17_Chr8g0352451 41.935 93 46 2 72 163 73 158 4.22e-11 64.7
Msa0341260 MtrunA17_Chr1g0173931 50.000 66 28 2 73 135 40 103 4.41e-11 63.9
Msa0341260 MtrunA17_Chr4g0010801 35.537 121 71 4 210 328 49 164 4.44e-11 62.4
Msa0341260 MtrunA17_Chr5g0427221 41.333 75 43 1 62 135 39 113 4.70e-11 60.8
Msa0341260 MtrunA17_Chr4g0061421 38.462 104 56 2 72 170 9 109 7.18e-11 64.7
Msa0341260 MtrunA17_Chr5g0405491 50.000 64 29 1 73 133 73 136 7.33e-11 60.8
Msa0341260 MtrunA17_Chr2g0307061 43.478 69 39 0 71 139 110 178 7.99e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0341260 AT1G80030.2 71.843 483 125 3 16 497 28 500 0.0 671
Msa0341260 AT1G80030.3 71.843 483 125 3 16 497 28 500 0.0 671
Msa0341260 AT1G80030.1 71.843 483 125 3 16 497 28 500 0.0 671
Msa0341260 AT1G80030.4 71.429 469 123 3 16 483 28 486 0.0 643
Msa0341260 AT2G22360.1 52.475 404 171 7 43 436 50 442 1.36e-133 394
Msa0341260 AT4G39960.1 50.957 418 194 7 12 426 28 437 1.59e-130 386
Msa0341260 AT4G39960.2 50.957 418 194 7 12 426 28 437 1.59e-130 386
Msa0341260 AT3G17830.1 49.492 394 188 4 36 423 29 417 6.11e-126 377
Msa0341260 AT5G48030.1 34.390 410 236 7 30 424 48 439 8.24e-68 225
Msa0341260 AT1G28210.3 33.699 365 211 7 67 424 44 384 3.33e-57 195
Msa0341260 AT1G28210.1 33.699 365 211 7 67 424 44 384 4.22e-57 195
Msa0341260 AT1G28210.2 33.699 365 211 7 67 424 44 384 5.48e-57 196
Msa0341260 AT5G22060.1 31.768 362 221 11 69 421 12 356 4.61e-42 155
Msa0341260 AT3G44110.1 31.452 372 226 10 69 431 12 363 5.89e-37 141
Msa0341260 AT3G44110.2 31.657 338 204 9 69 397 12 331 4.46e-34 131
Msa0341260 AT3G62600.1 27.989 368 207 12 68 423 23 344 2.79e-28 115
Msa0341260 AT5G01390.1 25.594 379 210 10 71 425 4 334 4.81e-22 97.4
Msa0341260 AT1G59725.1 27.487 382 190 13 71 423 4 327 3.99e-20 92.0
Msa0341260 AT5G01390.3 36.872 179 81 8 71 228 4 171 2.95e-19 87.4
Msa0341260 AT2G20560.1 44.144 111 44 3 71 163 4 114 4.17e-19 89.0
Msa0341260 AT5G25530.2 43.902 123 59 3 71 183 4 126 7.34e-19 88.2
Msa0341260 AT4G28480.2 46.535 101 37 2 71 154 4 104 2.19e-18 85.9
Msa0341260 AT4G28480.1 46.535 101 37 2 71 154 4 104 3.22e-18 86.7
Msa0341260 AT5G01390.2 40.000 135 57 5 71 184 4 135 2.03e-17 82.8
Msa0341260 AT5G01390.4 39.844 128 56 4 71 177 4 131 4.52e-17 80.9
Msa0341260 AT3G08910.1 52.703 74 33 1 71 142 4 77 1.32e-16 81.3
Msa0341260 AT5G25530.1 41.221 131 59 4 71 183 4 134 2.35e-16 80.9
Msa0341260 AT1G10350.1 37.500 120 54 3 71 169 4 123 3.93e-16 80.1
Msa0341260 AT3G08970.1 52.857 70 33 0 67 136 23 92 5.12e-16 81.3
Msa0341260 AT3G08970.2 52.857 70 33 0 67 136 23 92 5.12e-16 81.3
Msa0341260 AT1G59980.2 52.941 68 31 1 73 139 25 92 8.04e-15 76.3
Msa0341260 AT3G47940.1 52.703 74 32 1 71 141 4 77 9.10e-15 76.3
Msa0341260 AT1G59980.1 52.941 68 31 1 73 139 25 92 1.60e-14 75.9
Msa0341260 AT2G41000.2 45.055 91 40 2 71 155 3 89 1.99e-14 72.8
Msa0341260 AT2G41000.1 45.055 91 40 2 71 155 3 89 4.04e-14 71.2
Msa0341260 AT2G17880.1 42.268 97 53 1 40 133 37 133 8.83e-14 69.7
Msa0341260 AT4G39150.3 43.299 97 52 2 70 163 5 101 1.12e-13 72.8
Msa0341260 AT4G39150.1 43.299 97 52 2 70 163 5 101 1.12e-13 72.8
Msa0341260 AT4G39150.2 43.299 97 52 2 70 163 5 101 1.12e-13 72.8
Msa0341260 AT4G13830.3 45.455 77 39 1 72 145 67 143 1.24e-13 69.7
Msa0341260 AT4G13830.1 45.455 77 39 1 72 145 67 143 1.46e-13 68.9
Msa0341260 AT4G13830.2 45.455 77 39 1 72 145 67 143 5.16e-13 68.2
Msa0341260 AT1G56300.2 44.118 68 33 2 70 132 12 79 1.62e-12 64.7
Msa0341260 AT5G03160.1 49.231 65 31 1 71 133 370 434 1.90e-12 69.7
Msa0341260 AT5G18140.1 47.619 63 33 0 71 133 77 139 2.50e-12 68.6
Msa0341260 AT5G49060.2 44.776 67 37 0 69 135 97 163 3.53e-12 68.2
Msa0341260 AT5G49060.1 44.776 67 37 0 69 135 97 163 3.53e-12 68.2
Msa0341260 AT2G21510.5 40.206 97 55 2 70 163 5 101 4.44e-12 67.8
Msa0341260 AT2G21510.3 40.000 95 49 2 70 163 5 92 4.99e-12 67.8
Msa0341260 AT2G21510.1 40.000 95 49 2 70 163 5 92 4.99e-12 67.8
Msa0341260 AT2G21510.2 40.000 95 49 2 70 163 5 92 4.99e-12 67.8
Msa0341260 AT2G21510.4 40.000 95 49 2 70 163 5 92 4.99e-12 67.8
Msa0341260 AT5G59610.2 50.000 74 36 1 58 131 61 133 6.20e-12 66.2
Msa0341260 AT5G59610.1 50.000 74 36 1 58 131 61 133 8.17e-12 66.2
Msa0341260 AT5G59610.4 50.000 74 36 1 58 131 61 133 8.17e-12 66.2
Msa0341260 AT1G24120.1 40.217 92 44 2 71 151 20 111 8.56e-12 67.4
Msa0341260 AT5G59610.3 50.000 74 36 1 58 131 61 133 8.99e-12 66.2
Msa0341260 AT5G59610.5 50.000 74 36 1 58 131 61 133 8.99e-12 66.2
Msa0341260 AT2G35720.1 41.558 77 41 1 71 143 15 91 9.85e-12 67.8
Msa0341260 AT4G36040.1 41.000 100 42 3 59 144 56 152 1.16e-11 63.5
Msa0341260 AT1G76700.1 37.963 108 63 3 70 173 5 112 1.34e-11 66.6
Msa0341260 AT1G56300.1 44.118 68 33 2 70 132 12 79 2.05e-11 62.8
Msa0341260 AT1G68370.1 48.571 70 35 1 67 135 13 82 2.97e-11 65.9
Msa0341260 AT5G06910.1 33.333 123 67 3 73 191 31 142 4.41e-11 64.3

Find 183 sgRNAs with CRISPR-Local

Find 595 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACTTGTTGAAGAATATTT+TGG 0.193257 2_4:+62763256 Msa0341260:three_prime_UTR
TTCTTTACCAGTGGCGGATT+TGG 0.214923 2_4:-62755136 None:intergenic
TCCCCGTCACCTCCACAATT+TGG 0.228947 2_4:-62759463 None:intergenic
GTCCTTCCCCGCTGCATTTA+CGG 0.238343 2_4:-62759504 None:intergenic
AGAATATAGTTTACCTGATT+AGG 0.248681 2_4:+62763055 Msa0341260:three_prime_UTR
ATATCATCTCTTTGAATTCC+TGG 0.264263 2_4:-62760998 None:intergenic
TCTAGTTCAATGGAATTATT+AGG 0.265383 2_4:+62763017 Msa0341260:exon
CAGTTATCTAGAAGCTATAC+TGG 0.269288 2_4:+62761045 Msa0341260:CDS
TTTGTTGCACTTGTAAATTT+TGG 0.272823 2_4:+62763212 Msa0341260:three_prime_UTR
GTAGAAAAGCCGCCCATATT+TGG 0.287462 2_4:-62757742 None:intergenic
ATGGGTTCTGCTGGCTCAAC+TGG 0.289183 2_4:-62754752 None:intergenic
AGGACCGAACAAACACCTTT+TGG 0.304659 2_4:+62758637 Msa0341260:CDS
TTAGTGGGTAAATGTTAAAA+AGG 0.306469 2_4:-62754785 None:intergenic
CAGAAGATGAAGATGACTTA+TGG 0.309685 2_4:+62762421 Msa0341260:CDS
CCTCTCAAACCCAAATGTTA+TGG 0.320594 2_4:-62763475 None:intergenic
ACTCATTACCTAATACGTTT+TGG 0.325668 2_4:-62761945 None:intergenic
TTACAATACCAAAACGTATT+AGG 0.326918 2_4:+62761937 Msa0341260:CDS
TGCAGGACTTTCCTTACTTC+CGG 0.333362 2_4:-62762346 None:intergenic
AGGCATCACATGTTTCTAAA+TGG 0.335033 2_4:-62758540 None:intergenic
GACTGTTGCTGTTGGACTTT+CGG 0.337289 2_4:-62762379 None:intergenic
GAATATAGTTTACCTGATTA+GGG 0.341035 2_4:+62763056 Msa0341260:three_prime_UTR
TCTTTACCAGTGGCGGATTT+GGG 0.343685 2_4:-62755135 None:intergenic
TCTAATACTAAATTCTCTTC+TGG 0.347799 2_4:+62755045 Msa0341260:CDS
TCATATAGTCTCTCCCCTTT+CGG 0.351632 2_4:-62763110 None:intergenic
GCAATAAGCCACAACTTATC+TGG 0.354151 2_4:+62754673 Msa0341260:five_prime_UTR
ACCATGGATCCATCTGGATT+TGG 0.361587 2_4:+62757763 Msa0341260:CDS
TCTTCATCTTCTGATTTCTC+TGG 0.365886 2_4:-62762411 None:intergenic
TTAAACTTCACTTATGCATA+AGG 0.366647 2_4:-62763360 None:intergenic
CACTTGTGGTGGCAGGGGTC+AGG 0.367313 2_4:+62758609 Msa0341260:CDS
CTCTCAAACCCAAATGTTAT+GGG 0.377169 2_4:-62763474 None:intergenic
AGAGAATTTAGTATTAGAGT+TGG 0.379035 2_4:-62755040 None:intergenic
ATTGACGGTCTGTTTAATTT+CGG 0.379497 2_4:-62761885 None:intergenic
TCTCTAGTGCAACCTCTTCA+AGG 0.383207 2_4:-62763283 None:intergenic
GCGTCGTAGTACTGTTACTA+AGG 0.387946 2_4:+62757792 Msa0341260:CDS
CCAGGTTCCTTGTTCACATC+AGG 0.394472 2_4:-62756574 None:intergenic
AGTATTAGAGTTGGAGAAAG+TGG 0.401077 2_4:-62755031 None:intergenic
TGCTGGCTCAACTGGAGTAC+TGG 0.401906 2_4:-62754744 None:intergenic
TATGTTCCACTTGTGGTGGC+AGG 0.411064 2_4:+62758602 Msa0341260:CDS
TAATCAGGTAAACTATATTC+TGG 0.419047 2_4:-62763053 None:intergenic
CTTTCGGCCATTTGAACTGC+AGG 0.427687 2_4:-62762363 None:intergenic
TTATCGAAGGTTAGCTCGTC+AGG 0.429324 2_4:+62755170 Msa0341260:CDS
TTACAACACTAGCCCTAATC+AGG 0.431492 2_4:-62763068 None:intergenic
AAAGACAATCTCTAGTTCAA+TGG 0.432415 2_4:+62763007 Msa0341260:exon
CCACTCAGTCTCTTCCTCTC+TGG 0.432437 2_4:+62754708 Msa0341260:five_prime_UTR
AATGTCTCAAATAAATCAAA+TGG 0.435939 2_4:-62757712 None:intergenic
CTCTAGTGCAACCTCTTCAA+GGG 0.438786 2_4:-62763282 None:intergenic
ATACTGGAAGGTTGGGTCCT+AGG 0.439597 2_4:-62762142 None:intergenic
ATCTTCTGCAGCCGGAAGTA+AGG 0.441699 2_4:+62762335 Msa0341260:intron
GTGGCAGGGGTCAGGTGATG+AGG 0.444359 2_4:+62758617 Msa0341260:CDS
TAATTCAATTTCAATTTCAA+TGG 0.444747 2_4:+62754882 Msa0341260:exon
GTCACTGGAGAGGGTGATGC+TGG 0.445023 2_4:+62759595 Msa0341260:CDS
CGAACAGCTGCTGGCCGAAA+GGG 0.448339 2_4:+62763096 Msa0341260:three_prime_UTR
AGGGCTTTGTATGATCAATA+TGG 0.453668 2_4:+62757382 Msa0341260:CDS
ATCCATCTGGATTTGGCACT+CGG 0.456163 2_4:+62757770 Msa0341260:CDS
AGAAGAAGGAGAAGAATGAA+TGG 0.459935 2_4:-62755007 None:intergenic
TAACTTTAACAGTAAATAAG+TGG 0.462609 2_4:-62761917 None:intergenic
TCTGATTATTACTCTACTCT+CGG 0.463407 2_4:+62755108 Msa0341260:CDS
ATTAAAGTTAAAGTTCCTCC+TGG 0.464056 2_4:+62759547 Msa0341260:CDS
CCTGATGTGAACAAGGAACC+TGG 0.464650 2_4:+62756574 Msa0341260:CDS
GATGAAGGTGGTGGTGGAAG+TGG 0.469843 2_4:-62754928 None:intergenic
ATCCCTGCTGGTACCCAACC+TGG 0.472089 2_4:+62761831 Msa0341260:CDS
CAGAATAATGAATGAGATGA+AGG 0.472652 2_4:-62754943 None:intergenic
GGAAAGTCCTGCAGTTCAAA+TGG 0.473444 2_4:+62762356 Msa0341260:CDS
GAACAACATACTGGAAGGTT+GGG 0.475958 2_4:-62762149 None:intergenic
TTAAACTTGTCAGTTGCCCC+AGG 0.477510 2_4:-62756592 None:intergenic
ATGTTCCACTTGTGGTGGCA+GGG 0.478649 2_4:+62758603 Msa0341260:CDS
CAACCCAAAAGGTGTTTGTT+CGG 0.479856 2_4:-62758641 None:intergenic
GTCCAAATTGTGGAGGTGAC+GGG 0.481641 2_4:+62759461 Msa0341260:CDS
CACAACTTATCTGGTAGTTG+TGG 0.482329 2_4:+62754682 Msa0341260:five_prime_UTR
TATGATCAATATGGCGAGGC+AGG 0.483288 2_4:+62757391 Msa0341260:CDS
GGAAGGTTGGGTCCTAGGAC+GGG 0.483676 2_4:-62762137 None:intergenic
GAATGAGATGAAGGTGGTGG+TGG 0.486157 2_4:-62754934 None:intergenic
TCTCATTCATTATTCTGTAC+CGG 0.486406 2_4:+62754949 Msa0341260:CDS
ACTTGCAGGTCTGTAGCAAA+TGG 0.488248 2_4:+62762968 Msa0341260:intron
GACGAGGACATCTCCAGGTT+GGG 0.493540 2_4:-62761844 None:intergenic
AGATATACGTAAAGATCTCC+TGG 0.494601 2_4:-62760959 None:intergenic
AGTGGAACATACTCTCATCT+TGG 0.494603 2_4:-62758590 None:intergenic
TGCCGTAAATGCAGCGGGGA+AGG 0.495126 2_4:+62759502 Msa0341260:CDS
TTAAAGTTAAAGTTCCTCCT+GGG 0.497675 2_4:+62759548 Msa0341260:CDS
AATTTCTATACATACCTCAT+AGG 0.497885 2_4:-62756629 None:intergenic
CTCAACTGGAGTACTGGCAT+TGG 0.499407 2_4:-62754738 None:intergenic
CTTGAAGAACTTGCTTCTCT+AGG 0.500953 2_4:+62762091 Msa0341260:CDS
TGTCATAACAGGGGTCCTCC+AGG 0.502320 2_4:+62760941 Msa0341260:intron
TGTTCCACTTGTGGTGGCAG+GGG 0.505072 2_4:+62758604 Msa0341260:CDS
AGAACAACATACTGGAAGGT+TGG 0.505747 2_4:-62762150 None:intergenic
AAAGTTGCCGTAAATGCAGC+GGG 0.507133 2_4:+62759497 Msa0341260:CDS
TCAACTGGAGTACTGGCATT+GGG 0.507250 2_4:-62754737 None:intergenic
CTGACCCCTGCCACCACAAG+TGG 0.507884 2_4:-62758608 None:intergenic
ACTGGTACTGGTGCAAAGTT+AGG 0.508899 2_4:+62758565 Msa0341260:CDS
AAACAGGTAAAGACGGTTGA+AGG 0.509765 2_4:+62761792 Msa0341260:intron
CGCCCGCTTGAATTGTTAGT+GGG 0.510355 2_4:-62754800 None:intergenic
GTCATTCAAAATCCCGTCCT+AGG 0.511575 2_4:+62762125 Msa0341260:CDS
CTTGATGTGCTTGAGATACC+AGG 0.514132 2_4:+62760980 Msa0341260:CDS
GCAGCGGGGAAGGACGCATA+CGG 0.519290 2_4:+62759512 Msa0341260:CDS
TGTGATGCCTGTACTGGTAC+TGG 0.520706 2_4:+62758553 Msa0341260:CDS
ACCTGTGAGAACAACCCAAA+AGG 0.520884 2_4:-62758652 None:intergenic
TGTCCAAATTGTGGAGGTGA+CGG 0.521211 2_4:+62759460 Msa0341260:CDS
TGGAAGGTTGGGTCCTAGGA+CGG 0.521812 2_4:-62762138 None:intergenic
ACTTTGCATCTTCAGTTCAA+AGG 0.523338 2_4:+62762057 Msa0341260:intron
CAACAGGTATGATTTCTCCT+TGG 0.524403 2_4:+62758471 Msa0341260:intron
TCTCCAGGTTGGGTACCAGC+AGG 0.526854 2_4:-62761834 None:intergenic
TTACTAAGGGTGAAGACATC+CGG 0.527254 2_4:+62757806 Msa0341260:CDS
TTGGAGAAAGTGGAAGAAGA+AGG 0.527467 2_4:-62755021 None:intergenic
ACGCCCGCTTGAATTGTTAG+TGG 0.528064 2_4:-62754801 None:intergenic
TCGGTACACCCTTCCTTGCA+AGG 0.528930 2_4:-62761866 None:intergenic
GGCGTTCCCAAATCCGCCAC+TGG 0.530949 2_4:+62755129 Msa0341260:CDS
GTTTCAGTATGTCCAAATTG+TGG 0.531922 2_4:+62759451 Msa0341260:CDS
ATAAATATAGCATACCCTCT+TGG 0.531985 2_4:-62759619 None:intergenic
TGTCCTCGTCCTTGCAAGGA+AGG 0.532772 2_4:+62761857 Msa0341260:CDS
GTAATGATTCGAACAGCTGC+TGG 0.534114 2_4:+62763087 Msa0341260:three_prime_UTR
CACCCTTCCTTGCAAGGACG+AGG 0.534490 2_4:-62761860 None:intergenic
GGCTTTGATTTCTTTACCAG+TGG 0.535635 2_4:-62755145 None:intergenic
AGAGATTAGTAATGCCTATG+AGG 0.543434 2_4:+62756615 Msa0341260:CDS
ACGAGCTAACCTTCGATAAG+CGG 0.545760 2_4:-62755166 None:intergenic
CAGCGGGGAAGGACGCATAC+GGG 0.546893 2_4:+62759513 Msa0341260:CDS
AGTTATCTAGAAGCTATACT+GGG 0.550260 2_4:+62761046 Msa0341260:CDS
AAGTGGTCACCACGTATTGA+CGG 0.551433 2_4:-62761900 None:intergenic
ACAACTTATCTGGTAGTTGT+GGG 0.557101 2_4:+62754683 Msa0341260:five_prime_UTR
GCAGGAGTTAAGAGTTCAGT+CGG 0.558596 2_4:+62757409 Msa0341260:CDS
GTTAAGAGTTCAGTCGGAGG+AGG 0.559305 2_4:+62757415 Msa0341260:CDS
CGCCGAGTGCCAAATCCAGA+TGG 0.559447 2_4:-62757772 None:intergenic
GGACGAGGACATCTCCAGGT+TGG 0.563044 2_4:-62761845 None:intergenic
GAAACATGTGATGCCTGTAC+TGG 0.566268 2_4:+62758547 Msa0341260:CDS
GTTCCTCCTGGGGTTAGCGC+AGG 0.568793 2_4:+62759559 Msa0341260:CDS
TCTAGTGCAACCTCTTCAAG+GGG 0.569818 2_4:-62763281 None:intergenic
TTTGATTTCTTTACCAGTGG+CGG 0.570063 2_4:-62755142 None:intergenic
AAAGGAAATTGTTGTGGGAA+CGG 0.570565 2_4:-62754984 None:intergenic
AAATCAAAGCCGCTTATCGA+AGG 0.571341 2_4:+62755157 Msa0341260:CDS
GAATGGAAAGGAAATTGTTG+TGG 0.573138 2_4:-62754990 None:intergenic
CTGATGTGAACAAGGAACCT+GGG 0.573238 2_4:+62756575 Msa0341260:CDS
TCGAACAGCTGCTGGCCGAA+AGG 0.573766 2_4:+62763095 Msa0341260:three_prime_UTR
TATACTGGGGTCTGTAGTGA+AGG 0.574324 2_4:+62761060 Msa0341260:CDS
TAGCAAATGGAGCTCTAAAG+TGG 0.574327 2_4:+62762981 Msa0341260:CDS
AATGGAAAGGAAATTGTTGT+GGG 0.575082 2_4:-62754989 None:intergenic
AAGGAGAAGAATGAATGGAA+AGG 0.576245 2_4:-62755002 None:intergenic
GCAAGGACGAGGACATCTCC+AGG 0.576440 2_4:-62761849 None:intergenic
GAGATGTCCTCGTCCTTGCA+AGG 0.580447 2_4:+62761853 Msa0341260:CDS
TCCAAATTGTGGAGGTGACG+GGG 0.583688 2_4:+62759462 Msa0341260:CDS
CTTTGCACCAGTACCAGTAC+AGG 0.584881 2_4:-62758560 None:intergenic
AGCTATGCAACAAACGAATG+AGG 0.586265 2_4:-62763423 None:intergenic
AATGTTATGGGATCACCTCA+TGG 0.588681 2_4:-62763462 None:intergenic
GCCAAATCCAGATGGATCCA+TGG 0.590096 2_4:-62757764 None:intergenic
GTCCTCGTCCTTGCAAGGAA+GGG 0.591231 2_4:+62761858 Msa0341260:CDS
GGAACGGAGATGAATTCCTC+CGG 0.594195 2_4:-62754968 None:intergenic
CACAACTACCAGATAAGTTG+TGG 0.600704 2_4:-62754681 None:intergenic
CTCCAGGTTGGGTACCAGCA+GGG 0.602728 2_4:-62761833 None:intergenic
GGCACTTAAACAGGTAAAGA+CGG 0.603991 2_4:+62761785 Msa0341260:intron
CGTCGTAGTACTGTTACTAA+GGG 0.604949 2_4:+62757793 Msa0341260:CDS
ATACTGCCTGCGCTAACCCC+AGG 0.606475 2_4:-62759565 None:intergenic
TCTGAACTACAAATCCCTGC+TGG 0.611504 2_4:+62761819 Msa0341260:CDS
GAACAGCTGCTGGCCGAAAG+GGG 0.616718 2_4:+62763097 Msa0341260:three_prime_UTR
TAAAGTTAAAGTTCCTCCTG+GGG 0.618796 2_4:+62759549 Msa0341260:CDS
TACCCACTAACAATTCAAGC+GGG 0.619871 2_4:+62754798 Msa0341260:five_prime_UTR
AAGCATATTGAATACCGCAT+AGG 0.621041 2_4:-62757446 None:intergenic
GTATCATCCTGATGTGAACA+AGG 0.622969 2_4:+62756567 Msa0341260:intron
TTACCCACTAACAATTCAAG+CGG 0.623045 2_4:+62754797 Msa0341260:five_prime_UTR
GAGGGTGATGCTGGACCAAG+AGG 0.629360 2_4:+62759604 Msa0341260:CDS
CATTCATTATTCTGTACCGG+AGG 0.631267 2_4:+62754952 Msa0341260:CDS
AATGAATGAGATGAAGGTGG+TGG 0.632508 2_4:-62754937 None:intergenic
CAGAGAGGAAGAGACTGAGT+GGG 0.634296 2_4:-62754707 None:intergenic
CTTCAGTTCAAAGGAGCGTG+AGG 0.643651 2_4:+62762066 Msa0341260:intron
TCAGTATGTCCAAATTGTGG+AGG 0.645215 2_4:+62759454 Msa0341260:CDS
AATTGCCTCAGAAAACTCCA+AGG 0.646456 2_4:-62758488 None:intergenic
AGTTCAATGGAATTATTAGG+TGG 0.649164 2_4:+62763020 Msa0341260:exon
GAAAGTTGCCGTAAATGCAG+CGG 0.650404 2_4:+62759496 Msa0341260:CDS
AACTGATTGATATTGTCGAG+CGG 0.658179 2_4:-62761027 None:intergenic
GGAGTTAAGAGTTCAGTCGG+AGG 0.664891 2_4:+62757412 Msa0341260:CDS
AGAGTATGTTCCACTTGTGG+TGG 0.666541 2_4:+62758598 Msa0341260:CDS
AATAATGAATGAGATGAAGG+TGG 0.671170 2_4:-62754940 None:intergenic
TGATGTGAACAAGGAACCTG+GGG 0.673343 2_4:+62756576 Msa0341260:CDS
TAGTGCAACCTCTTCAAGGG+GGG 0.673533 2_4:-62763279 None:intergenic
ATGAGAGTATGTTCCACTTG+TGG 0.676889 2_4:+62758595 Msa0341260:CDS
TTTGTATGATCAATATGGCG+AGG 0.678449 2_4:+62757387 Msa0341260:CDS
CCAGAGAGGAAGAGACTGAG+TGG 0.684087 2_4:-62754708 None:intergenic
CTGCCTGCGCTAACCCCAGG+AGG 0.685288 2_4:-62759562 None:intergenic
AGGGTGATGCTGGACCAAGA+GGG 0.687007 2_4:+62759605 Msa0341260:CDS
CTAGTGCAACCTCTTCAAGG+GGG 0.687095 2_4:-62763280 None:intergenic
AGGAGGATCAAGTGCCTATG+CGG 0.690520 2_4:+62757432 Msa0341260:CDS
TTAAACAGACCGTCAATACG+TGG 0.692147 2_4:+62761891 Msa0341260:CDS
GTTATCTAGAAGCTATACTG+GGG 0.733881 2_4:+62761047 Msa0341260:CDS
GCATTGGGTACATACCAGAG+AGG 0.769529 2_4:-62754722 None:intergenic
TATACGTAAAGATCTCCTGG+AGG 0.770752 2_4:-62760956 None:intergenic
AAGTTGCCGTAAATGCAGCG+GGG 0.833562 2_4:+62759498 Msa0341260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAAAAATAAAAATAAA+AGG - chr2_4:62762495-62762514 None:intergenic 0.0%
!! TAATACTCATATAATAAATA+GGG - chr2_4:62758146-62758165 None:intergenic 10.0%
!! TTAATACTCATATAATAAAT+AGG - chr2_4:62758147-62758166 None:intergenic 10.0%
!! AGAAAGTAAAAATATAAAAA+GGG + chr2_4:62758948-62758967 Msa0341260:intron 10.0%
!! CTAAAACAAATAAATAATAT+TGG - chr2_4:62759034-62759053 None:intergenic 10.0%
!! AAATAAAAGGAAAATTATAA+CGG - chr2_4:62759197-62759216 None:intergenic 10.0%
!! ATATATTAGAAGAATAATTT+AGG - chr2_4:62760357-62760376 None:intergenic 10.0%
!! TTAGATTAATATCTAAATAA+CGG - chr2_4:62761309-62761328 None:intergenic 10.0%
!!! AAAAAAAGTAAACTTTTTTT+CGG - chr2_4:62761445-62761464 None:intergenic 10.0%
!! TTGAATTATGAAGAAAAATA+TGG - chr2_4:62754870-62754889 None:intergenic 15.0%
!! TAATTCAATTTCAATTTCAA+TGG + chr2_4:62754882-62754901 Msa0341260:exon 15.0%
!!! TTTTTTAAAATTAAGATTGC+AGG + chr2_4:62755557-62755576 Msa0341260:intron 15.0%
!!! TTTTTAAAATTAAGATTGCA+GGG + chr2_4:62755558-62755577 Msa0341260:intron 15.0%
!!! AAAACTGATTTTAATTTGTT+TGG + chr2_4:62756273-62756292 Msa0341260:intron 15.0%
!!! ATTTATTTGAGACATTTTTT+GGG + chr2_4:62757719-62757738 Msa0341260:CDS 15.0%
!! AAATATAATAATCATTTCCT+TGG - chr2_4:62757879-62757898 None:intergenic 15.0%
!! AATACTCATATAATAAATAG+GGG - chr2_4:62758145-62758164 None:intergenic 15.0%
!! TATTATATGAGTATTAATCT+AGG + chr2_4:62758150-62758169 Msa0341260:intron 15.0%
!! TCAATTACAAAATAGAAATA+CGG - chr2_4:62758822-62758841 None:intergenic 15.0%
!!! CTTTTTATATTTTTACTTTC+TGG - chr2_4:62758949-62758968 None:intergenic 15.0%
!! CAGAAAGTAAAAATATAAAA+AGG + chr2_4:62758947-62758966 Msa0341260:intron 15.0%
!! AATAAAAGGAAAATTATAAC+GGG - chr2_4:62759196-62759215 None:intergenic 15.0%
!! TTCTATTAGCTATTTATATA+TGG - chr2_4:62760305-62760324 None:intergenic 15.0%
!! AAAAATTCATTTCTCTTAAT+TGG - chr2_4:62760380-62760399 None:intergenic 15.0%
!! TAGATTAATATCTAAATAAC+GGG - chr2_4:62761308-62761327 None:intergenic 15.0%
!!! AAAAAAGTAAACTTTTTTTC+GGG - chr2_4:62761444-62761463 None:intergenic 15.0%
!! ACATGTTTATAAAAGAAAAA+TGG - chr2_4:62761531-62761550 None:intergenic 15.0%
!!! TTTTCTTTTATAAACATGTT+TGG + chr2_4:62761532-62761551 Msa0341260:intron 15.0%
!! AACTAAATATCATATGTTAT+AGG - chr2_4:62762228-62762247 None:intergenic 15.0%
!! ATAAAATGACAATAAATGAA+AGG - chr2_4:62762829-62762848 None:intergenic 15.0%
!!! TTCATTTATTGTCATTTTAT+AGG + chr2_4:62762829-62762848 Msa0341260:intron 15.0%
!! ACATTAGGATTTATTTAGTT+TGG + chr2_4:62755229-62755248 Msa0341260:intron 20.0%
!! GTGTATAATTGATTATAGAT+GGG + chr2_4:62755313-62755332 Msa0341260:intron 20.0%
!! TATAAATAAGCTCAAATATG+TGG - chr2_4:62755372-62755391 None:intergenic 20.0%
!!! TTTTAAAATTAAGATTGCAG+GGG + chr2_4:62755559-62755578 Msa0341260:intron 20.0%
!!! TCTTTAAGTTAATGTTACAA+GGG - chr2_4:62755893-62755912 None:intergenic 20.0%
!!! TTCTTTAAGTTAATGTTACA+AGG - chr2_4:62755894-62755913 None:intergenic 20.0%
!! AAAATAACGTTAAGAGTTAA+AGG - chr2_4:62756339-62756358 None:intergenic 20.0%
!!! TTGTGTTAAGTTTTCTTTAT+TGG + chr2_4:62756675-62756694 Msa0341260:intron 20.0%
!! AAAAAATAAATCATCAGATC+AGG - chr2_4:62756889-62756908 None:intergenic 20.0%
!!! TTATTTTTTTTCCAATTCCA+AGG + chr2_4:62756911-62756930 Msa0341260:intron 20.0%
!! TTCGATTTAAACAAAGAAAA+CGG + chr2_4:62757062-62757081 Msa0341260:intron 20.0%
!!! TTAAGAATAAAAAGTACCAT+AGG - chr2_4:62757211-62757230 None:intergenic 20.0%
!!! TGGTACTTTTTATTCTTAAT+TGG + chr2_4:62757212-62757231 Msa0341260:intron 20.0%
!! TTTATTCTTAATTGGATTGA+TGG + chr2_4:62757220-62757239 Msa0341260:intron 20.0%
!! AATGTCTCAAATAAATCAAA+TGG - chr2_4:62757715-62757734 None:intergenic 20.0%
!!! GATTTATTTGAGACATTTTT+TGG + chr2_4:62757718-62757737 Msa0341260:CDS 20.0%
!!! CAACAAATCAATTTAGAATA+AGG - chr2_4:62757931-62757950 None:intergenic 20.0%
!!! CTTTTCTAAATATTAGCTTA+TGG + chr2_4:62758340-62758359 Msa0341260:intron 20.0%
!! AAATAAACTCAATGATTCAA+TGG - chr2_4:62758989-62759008 None:intergenic 20.0%
!!! TTAGATAAAGTCTTTGAAAT+TGG + chr2_4:62759050-62759069 Msa0341260:intron 20.0%
!! ATAAAAGGAAAATTATAACG+GGG - chr2_4:62759195-62759214 None:intergenic 20.0%
!! CAACAATTCATGAAAATAAA+AGG - chr2_4:62759210-62759229 None:intergenic 20.0%
!!! AAGAAATACTTCTAAAAGAA+AGG + chr2_4:62759801-62759820 Msa0341260:intron 20.0%
!!! AATTCTAAGAGTTTACATTA+AGG - chr2_4:62759867-62759886 None:intergenic 20.0%
!!! TTAGAAGAATAATTTAGGTT+GGG - chr2_4:62760352-62760371 None:intergenic 20.0%
!! ATTAGAAGAATAATTTAGGT+TGG - chr2_4:62760353-62760372 None:intergenic 20.0%
!! AACATTGTTAAATATCTTGA+GGG + chr2_4:62760511-62760530 Msa0341260:intron 20.0%
!!! TAGTACTTTTATTTTCATGA+AGG + chr2_4:62761159-62761178 Msa0341260:intron 20.0%
!!! TTTTCATGAAGGTTTTATTT+TGG + chr2_4:62761170-62761189 Msa0341260:intron 20.0%
!! TAATCTAATCTCTTGATATT+TGG + chr2_4:62761321-62761340 Msa0341260:intron 20.0%
!! AATCTAATCTCTTGATATTT+GGG + chr2_4:62761322-62761341 Msa0341260:intron 20.0%
!!! ACTTTTTTTTTTTTTTTGGG+TGG + chr2_4:62761709-62761728 Msa0341260:intron 20.0%
!! TAACTTTAACAGTAAATAAG+TGG - chr2_4:62761920-62761939 None:intergenic 20.0%
!!! ATCAGTTTTGAAACTAAATA+AGG + chr2_4:62762607-62762626 Msa0341260:intron 20.0%
!!! TCAGTTTTGAAACTAAATAA+GGG + chr2_4:62762608-62762627 Msa0341260:intron 20.0%
!! ACAAAAAATCAGATCTTATT+GGG - chr2_4:62762699-62762718 None:intergenic 20.0%
!! TACAAAAAATCAGATCTTAT+TGG - chr2_4:62762700-62762719 None:intergenic 20.0%
!!! TATTGTCATTTTATAGGATA+AGG + chr2_4:62762835-62762854 Msa0341260:intron 20.0%
!!! AACTTTTAACCTAATAGTAT+AGG - chr2_4:62762886-62762905 None:intergenic 20.0%
!!! TAACTTGTTGAAGAATATTT+TGG + chr2_4:62763256-62763275 Msa0341260:three_prime_UTR 20.0%
!! TTAGTGGGTAAATGTTAAAA+AGG - chr2_4:62754788-62754807 None:intergenic 25.0%
! AGAGAATTTAGTATTAGAGT+TGG - chr2_4:62755043-62755062 None:intergenic 25.0%
! TCTAATACTAAATTCTCTTC+TGG + chr2_4:62755045-62755064 Msa0341260:CDS 25.0%
! GGTGTATAATTGATTATAGA+TGG + chr2_4:62755312-62755331 Msa0341260:intron 25.0%
!! CTCTGTTTGCTAAAAAATAA+TGG + chr2_4:62755423-62755442 Msa0341260:intron 25.0%
! CTTATTATATAAGCTTGTAG+TGG - chr2_4:62755655-62755674 None:intergenic 25.0%
!! TTTAGTCAAATGAGCTTTAT+AGG + chr2_4:62755717-62755736 Msa0341260:intron 25.0%
! CATATTGAATTTGTAGTGTT+TGG - chr2_4:62755988-62756007 None:intergenic 25.0%
!! AAACATAACTGGTTTATGTT+TGG - chr2_4:62756213-62756232 None:intergenic 25.0%
! TGGATACATTCATATAAAAG+GGG - chr2_4:62756386-62756405 None:intergenic 25.0%
! CTGGATACATTCATATAAAA+GGG - chr2_4:62756387-62756406 None:intergenic 25.0%
! TCTGGATACATTCATATAAA+AGG - chr2_4:62756388-62756407 None:intergenic 25.0%
! AATGTAAAATGGTTTATGTC+TGG - chr2_4:62756406-62756425 None:intergenic 25.0%
! AAAGTTAGTCGAATGTAAAA+TGG - chr2_4:62756417-62756436 None:intergenic 25.0%
! AATTTCTATACATACCTCAT+AGG - chr2_4:62756632-62756651 None:intergenic 25.0%
!! TAAGTTTTCTTTATTGGAAG+TGG + chr2_4:62756681-62756700 Msa0341260:intron 25.0%
! ACTGAAGAAGAAAAGAAAAA+CGG - chr2_4:62756792-62756811 None:intergenic 25.0%
! CATTCATTTGACGTTTAAAT+GGG + chr2_4:62756862-62756881 Msa0341260:intron 25.0%
! GAGAAAGAAAAACATAGAAA+CGG - chr2_4:62757145-62757164 None:intergenic 25.0%
! TTTCTAATACCGTGTTATAA+AGG + chr2_4:62757165-62757184 Msa0341260:intron 25.0%
!!! TCAATTTTTTCCCATAAAGA+AGG - chr2_4:62757590-62757609 None:intergenic 25.0%
! TGATTAAAAAAAAGTTCCCT+AGG - chr2_4:62758079-62758098 None:intergenic 25.0%
! TAATAAATAGGGGTCTAAAT+TGG - chr2_4:62758135-62758154 None:intergenic 25.0%
!!! CTTTTGATTCAAATATCAAC+AGG + chr2_4:62758455-62758474 Msa0341260:intron 25.0%
!! TTTGTAATTGATTTCTACTG+TGG + chr2_4:62758831-62758850 Msa0341260:intron 25.0%
!!! TTATATTTTTACTTTCTGGC+TGG - chr2_4:62758945-62758964 None:intergenic 25.0%
! AATATTGGTATTACAGAGAA+CGG - chr2_4:62759019-62759038 None:intergenic 25.0%
!! ATCCCATGATATATACTTTT+TGG + chr2_4:62759079-62759098 Msa0341260:intron 25.0%
!!! TCCCATGATATATACTTTTT+GGG + chr2_4:62759080-62759099 Msa0341260:intron 25.0%
!! TCCCAAAAAGTATATATCAT+GGG - chr2_4:62759084-62759103 None:intergenic 25.0%
!! ATCCCAAAAAGTATATATCA+TGG - chr2_4:62759085-62759104 None:intergenic 25.0%
!!! CAATGTTTTTATCTTATGTG+AGG - chr2_4:62759382-62759401 None:intergenic 25.0%
!!! AAAACATTGTACTTTTTCTC+TGG + chr2_4:62759393-62759412 Msa0341260:intron 25.0%
! TTTCTTATTGTGAAAGTCTT+AGG + chr2_4:62759659-62759678 Msa0341260:intron 25.0%
! CATAACTTCTATCCAATAAT+TGG - chr2_4:62759685-62759704 None:intergenic 25.0%
! TAAGAAAACTTACTAACTCA+TGG - chr2_4:62759767-62759786 None:intergenic 25.0%
!! AATACTTCTAAAAGAAAGGA+AGG + chr2_4:62759805-62759824 Msa0341260:intron 25.0%
! GGATATTACAAAGTAAAAGA+AGG + chr2_4:62759826-62759845 Msa0341260:intron 25.0%
! TTCATTATTAGAATGCTCTT+TGG - chr2_4:62760109-62760128 None:intergenic 25.0%
! TAGCTATTTATATATGGAGT+AGG - chr2_4:62760299-62760318 None:intergenic 25.0%
! CAACATTGTTAAATATCTTG+AGG + chr2_4:62760510-62760529 Msa0341260:intron 25.0%
!!! TCATTTTATTTTGTGTGAAC+CGG - chr2_4:62760608-62760627 None:intergenic 25.0%
! AAGTTTGAATATATCCTCTT+TGG + chr2_4:62760663-62760682 Msa0341260:intron 25.0%
!!! CTACCTTGAGAATTTTAAAA+AGG + chr2_4:62760721-62760740 Msa0341260:intron 25.0%
!!! TGACCTTTTTAAAATTCTCA+AGG - chr2_4:62760727-62760746 None:intergenic 25.0%
!!! GTTGTTTGTTGTTATTGAAA+TGG + chr2_4:62760848-62760867 Msa0341260:intron 25.0%
! CATGTAATTGATCAATGATA+TGG - chr2_4:62760896-62760915 None:intergenic 25.0%
!! ATTGATCTTTTTGTCATAAC+AGG + chr2_4:62760930-62760949 Msa0341260:intron 25.0%
!! TTGATCTTTTTGTCATAACA+GGG + chr2_4:62760931-62760950 Msa0341260:intron 25.0%
!!! GTTTTTTTGCTTCTTTTTGT+AGG + chr2_4:62761121-62761140 Msa0341260:intron 25.0%
! AGAATCTGAATAGAACATTA+GGG - chr2_4:62761269-62761288 None:intergenic 25.0%
! TAGAATCTGAATAGAACATT+AGG - chr2_4:62761270-62761289 None:intergenic 25.0%
!! TAAATAACGGGAATATATCA+AGG - chr2_4:62761296-62761315 None:intergenic 25.0%
! TTACAATACCAAAACGTATT+AGG + chr2_4:62761937-62761956 Msa0341260:CDS 25.0%
! TTGACAAAAAAGCAATATAC+AGG - chr2_4:62762009-62762028 None:intergenic 25.0%
!! TTAGTTCTTCTAAACATACT+TGG + chr2_4:62762246-62762265 Msa0341260:intron 25.0%
! ATGGAATAAACTAAAAAACG+TGG + chr2_4:62762440-62762459 Msa0341260:CDS 25.0%
!!! CAGTTTTGAAACTAAATAAG+GGG + chr2_4:62762609-62762628 Msa0341260:intron 25.0%
!!! AGTTTTGAAACTAAATAAGG+GGG + chr2_4:62762610-62762629 Msa0341260:intron 25.0%
! ATATAGCAATTGAGTACATA+AGG - chr2_4:62762675-62762694 None:intergenic 25.0%
! TAATCACCAACAAAAAATCT+CGG - chr2_4:62762759-62762778 None:intergenic 25.0%
! ACTAAAACAAACGAAAAAAG+TGG - chr2_4:62762863-62762882 None:intergenic 25.0%
!!! TGTTTTAGTCCTATACTATT+AGG + chr2_4:62762874-62762893 Msa0341260:intron 25.0%
!! TCTAGTTCAATGGAATTATT+AGG + chr2_4:62763017-62763036 Msa0341260:exon 25.0%
! TAATCAGGTAAACTATATTC+TGG - chr2_4:62763056-62763075 None:intergenic 25.0%
! AGAATATAGTTTACCTGATT+AGG + chr2_4:62763055-62763074 Msa0341260:three_prime_UTR 25.0%
! GAATATAGTTTACCTGATTA+GGG + chr2_4:62763056-62763075 Msa0341260:three_prime_UTR 25.0%
!! TTTGTTGCACTTGTAAATTT+TGG + chr2_4:62763212-62763231 Msa0341260:three_prime_UTR 25.0%
! TTAAACTTCACTTATGCATA+AGG - chr2_4:62763363-62763382 None:intergenic 25.0%
!! TAAAAAGGATCGGGTTTTAT+GGG - chr2_4:62754773-62754792 None:intergenic 30.0%
! TTAAAAAGGATCGGGTTTTA+TGG - chr2_4:62754774-62754793 None:intergenic 30.0%
GGTAAATGTTAAAAAGGATC+GGG - chr2_4:62754782-62754801 None:intergenic 30.0%
GGGTAAATGTTAAAAAGGAT+CGG - chr2_4:62754783-62754802 None:intergenic 30.0%
AATAATGAATGAGATGAAGG+TGG - chr2_4:62754943-62754962 None:intergenic 30.0%
CAGAATAATGAATGAGATGA+AGG - chr2_4:62754946-62754965 None:intergenic 30.0%
TCTCATTCATTATTCTGTAC+CGG + chr2_4:62754949-62754968 Msa0341260:CDS 30.0%
AATGGAAAGGAAATTGTTGT+GGG - chr2_4:62754992-62755011 None:intergenic 30.0%
!!! AAAACAGTGAAAAAGCGTTT+TGG - chr2_4:62755078-62755097 None:intergenic 30.0%
TCTGATTATTACTCTACTCT+CGG + chr2_4:62755108-62755127 Msa0341260:CDS 30.0%
TTCACAAGACAAGAAAAGAA+TGG - chr2_4:62755210-62755229 None:intergenic 30.0%
TTTCTTGTCTTGTGAACATT+AGG + chr2_4:62755214-62755233 Msa0341260:intron 30.0%
!! GGTTTTTCAATGCATATTGT+TGG + chr2_4:62755250-62755269 Msa0341260:intron 30.0%
! TTCAATGCATATTGTTGGTT+TGG + chr2_4:62755255-62755274 Msa0341260:intron 30.0%
!!! TGTTGGTTTGGTTTCAATTT+TGG + chr2_4:62755267-62755286 Msa0341260:intron 30.0%
!! GTTTGGTTTCAATTTTGGAT+GGG + chr2_4:62755272-62755291 Msa0341260:intron 30.0%
!! TTTGGTTTCAATTTTGGATG+GGG + chr2_4:62755273-62755292 Msa0341260:intron 30.0%
! TAGATGGGTAGAATTGATTT+AGG + chr2_4:62755328-62755347 Msa0341260:intron 30.0%
! AGATGGGTAGAATTGATTTA+GGG + chr2_4:62755329-62755348 Msa0341260:intron 30.0%
CTTACAAGCTCATTTGATTA+AGG + chr2_4:62755400-62755419 Msa0341260:intron 30.0%
CTGTGTTTGGTAAAAATTAG+CGG + chr2_4:62755475-62755494 Msa0341260:intron 30.0%
AAGCTAATTCAAGTAGCTTA+TGG - chr2_4:62755624-62755643 None:intergenic 30.0%
CTCATTTGACTAAAAAAGAC+CGG - chr2_4:62755711-62755730 None:intergenic 30.0%
!!! AACCAAATGGGTCTTTTTTA+GGG - chr2_4:62755776-62755795 None:intergenic 30.0%
!!! AAACCAAATGGGTCTTTTTT+AGG - chr2_4:62755777-62755796 None:intergenic 30.0%
TTAAGCTTGTGAAACCAAAT+GGG - chr2_4:62755788-62755807 None:intergenic 30.0%
TTTAAGCTTGTGAAACCAAA+TGG - chr2_4:62755789-62755808 None:intergenic 30.0%
TTGAACGTTAAAACCATGTT+TGG - chr2_4:62756156-62756175 None:intergenic 30.0%
AAATGTGGAACAAACATAAC+TGG - chr2_4:62756224-62756243 None:intergenic 30.0%
AGTTATGTTTGTTCCACATT+TGG + chr2_4:62756223-62756242 Msa0341260:intron 30.0%
GCATTGAAATCGTGTTTATT+TGG - chr2_4:62756499-62756518 None:intergenic 30.0%
TCAATGCAAACAATCTTACT+TGG + chr2_4:62756512-62756531 Msa0341260:intron 30.0%
CAATAACAATGAACAATGAG+TGG - chr2_4:62756658-62756677 None:intergenic 30.0%
AAGAAAAACGGTAACAAGTT+AGG - chr2_4:62756780-62756799 None:intergenic 30.0%
! TCTTTTCTTCTTCAGTATTG+TGG + chr2_4:62756796-62756815 Msa0341260:intron 30.0%
CCATTTAAACGTCAAATGAA+TGG - chr2_4:62756864-62756883 None:intergenic 30.0%
CCATTCATTTGACGTTTAAA+TGG + chr2_4:62756861-62756880 Msa0341260:intron 30.0%
ATGTAAGAAAACCTTGGAAT+TGG - chr2_4:62756925-62756944 None:intergenic 30.0%
GCAACAAAACACAACATAAT+GGG - chr2_4:62756970-62756989 None:intergenic 30.0%
TGCAACAAAACACAACATAA+TGG - chr2_4:62756971-62756990 None:intergenic 30.0%
GAAATATTTGACCAAGTCAA+AGG + chr2_4:62757027-62757046 Msa0341260:intron 30.0%
AAGTTGAGTCCTTTATAACA+CGG - chr2_4:62757177-62757196 None:intergenic 30.0%
AACTTCATAAGAAAGTCCTA+TGG + chr2_4:62757192-62757211 Msa0341260:intron 30.0%
ACAATTATACTACTACACGA+CGG - chr2_4:62757287-62757306 None:intergenic 30.0%
TTCTGAATTATAACACTGTC+AGG + chr2_4:62757339-62757358 Msa0341260:intron 30.0%
! ATGATAAAAACTTGCTTGTC+AGG + chr2_4:62757521-62757540 Msa0341260:intron 30.0%
CTTACATAAGCAGCAAAAAT+GGG - chr2_4:62757650-62757669 None:intergenic 30.0%
!!! ACATTTTTTGGGCCAAATAT+GGG + chr2_4:62757730-62757749 Msa0341260:CDS 30.0%
AATAGGAGAGATTAGATACA+TGG - chr2_4:62758002-62758021 None:intergenic 30.0%
TCTCCTATTTGAATAAAGCT+TGG + chr2_4:62758013-62758032 Msa0341260:intron 30.0%
!! TGACCAAGCTTTATTCAAAT+AGG - chr2_4:62758019-62758038 None:intergenic 30.0%
CAAAATCTAATGCTTTGGTT+GGG + chr2_4:62758212-62758231 Msa0341260:intron 30.0%
AAAATCTAATGCTTTGGTTG+GGG + chr2_4:62758213-62758232 Msa0341260:intron 30.0%
AAAGTTATATGCGGAAGAAT+AGG - chr2_4:62758295-62758314 None:intergenic 30.0%
!! AGTTGTTTTCTTGTTGAGTT+CGG + chr2_4:62758681-62758700 Msa0341260:intron 30.0%
TACACAACAGAGTTTGTAAT+TGG + chr2_4:62759111-62759130 Msa0341260:intron 30.0%
GATCAACGTAGAAACTTAAT+TGG - chr2_4:62759158-62759177 None:intergenic 30.0%
GCTAATCTCTATTCAATGTT+AGG + chr2_4:62759429-62759448 Msa0341260:intron 30.0%
ATTAAAGTTAAAGTTCCTCC+TGG + chr2_4:62759547-62759566 Msa0341260:CDS 30.0%
TTAAAGTTAAAGTTCCTCCT+GGG + chr2_4:62759548-62759567 Msa0341260:CDS 30.0%
ATAAATATAGCATACCCTCT+TGG - chr2_4:62759622-62759641 None:intergenic 30.0%
CTAACTCATGGAAACATATA+CGG - chr2_4:62759755-62759774 None:intergenic 30.0%
! CCTTAGAAGTTAATTTGGTA+GGG - chr2_4:62759911-62759930 None:intergenic 30.0%
! ACCTTAGAAGTTAATTTGGT+AGG - chr2_4:62759912-62759931 None:intergenic 30.0%
!! CAAATTAACTTCTAAGGTGA+GGG + chr2_4:62759914-62759933 Msa0341260:intron 30.0%
! ATCTAAAGCGCGAATTAATA+TGG + chr2_4:62760023-62760042 Msa0341260:intron 30.0%
! TCTAAAGCGCGAATTAATAT+GGG + chr2_4:62760024-62760043 Msa0341260:intron 30.0%
ATTGTTAAATATCTTGAGGG+AGG + chr2_4:62760514-62760533 Msa0341260:intron 30.0%
TTGTTAAATATCTTGAGGGA+GGG + chr2_4:62760515-62760534 Msa0341260:intron 30.0%
!!! CATTTTATTTTGTGTGAACC+GGG - chr2_4:62760607-62760626 None:intergenic 30.0%
! TGATCTTTTTGTCATAACAG+GGG + chr2_4:62760932-62760951 Msa0341260:intron 30.0%
ATATCATCTCTTTGAATTCC+TGG - chr2_4:62761001-62761020 None:intergenic 30.0%
AGTTATCTAGAAGCTATACT+GGG + chr2_4:62761046-62761065 Msa0341260:CDS 30.0%
TATTATTCATGCTTGAAGCT+TGG + chr2_4:62761099-62761118 Msa0341260:intron 30.0%
!! TGATATTTGGGATTTTACTG+CGG + chr2_4:62761334-62761353 Msa0341260:intron 30.0%
AATCTGACGCTATATTATGT+TGG + chr2_4:62761357-62761376 Msa0341260:intron 30.0%
!! CTTAAGTTGAAAAACACGTT+TGG + chr2_4:62761465-62761484 Msa0341260:intron 30.0%
ACAATCTCGAAGTATGAAAA+AGG - chr2_4:62761558-62761577 None:intergenic 30.0%
! AATCAACAGCTAACATTTTC+CGG + chr2_4:62761764-62761783 Msa0341260:intron 30.0%
! ATTGACGGTCTGTTTAATTT+CGG - chr2_4:62761888-62761907 None:intergenic 30.0%
! ACTCATTACCTAATACGTTT+TGG - chr2_4:62761948-62761967 None:intergenic 30.0%
CAAAAAAGCAATATACAGGA+GGG - chr2_4:62762005-62762024 None:intergenic 30.0%
ACAAAAAAGCAATATACAGG+AGG - chr2_4:62762006-62762025 None:intergenic 30.0%
AATTCAACTATAGTCTACTG+TGG - chr2_4:62762299-62762318 None:intergenic 30.0%
AATAAACTAAAAAACGTGGC+TGG + chr2_4:62762444-62762463 Msa0341260:CDS 30.0%
ATAAACTAAAAAACGTGGCT+GGG + chr2_4:62762445-62762464 Msa0341260:CDS 30.0%
! CGCAATCAGTTTTCATTAAT+TGG + chr2_4:62762522-62762541 Msa0341260:intron 30.0%
CAATTGAGTACATAAGGAAA+AGG - chr2_4:62762669-62762688 None:intergenic 30.0%
AATCACCAACAAAAAATCTC+GGG - chr2_4:62762758-62762777 None:intergenic 30.0%
!! TTGGTGATTATTTTCATTGC+TGG + chr2_4:62762769-62762788 Msa0341260:intron 30.0%
GATGCACAAAATAATTACCA+AGG - chr2_4:62762924-62762943 None:intergenic 30.0%
! AAAGACAATCTCTAGTTCAA+TGG + chr2_4:62763007-62763026 Msa0341260:exon 30.0%
AGTTCAATGGAATTATTAGG+TGG + chr2_4:62763020-62763039 Msa0341260:exon 30.0%
ACAACTTATCTGGTAGTTGT+GGG + chr2_4:62754683-62754702 Msa0341260:five_prime_UTR 35.0%
TTACCCACTAACAATTCAAG+CGG + chr2_4:62754797-62754816 Msa0341260:five_prime_UTR 35.0%
AAAGGAAATTGTTGTGGGAA+CGG - chr2_4:62754987-62755006 None:intergenic 35.0%
GAATGGAAAGGAAATTGTTG+TGG - chr2_4:62754993-62755012 None:intergenic 35.0%
AAGGAGAAGAATGAATGGAA+AGG - chr2_4:62755005-62755024 None:intergenic 35.0%
AGAAGAAGGAGAAGAATGAA+TGG - chr2_4:62755010-62755029 None:intergenic 35.0%
AGTATTAGAGTTGGAGAAAG+TGG - chr2_4:62755034-62755053 None:intergenic 35.0%
! TTTGATTTCTTTACCAGTGG+CGG - chr2_4:62755145-62755164 None:intergenic 35.0%
!! GGTTTGGTTTCAATTTTGGA+TGG + chr2_4:62755271-62755290 Msa0341260:intron 35.0%
! TTGGTTTCAATTTTGGATGG+GGG + chr2_4:62755274-62755293 Msa0341260:intron 35.0%
TGGGGGAAAATTGATCATAT+AGG + chr2_4:62755291-62755310 Msa0341260:intron 35.0%
! GAATTGATTTAGGGTCTGTT+TGG + chr2_4:62755338-62755357 Msa0341260:intron 35.0%
!! CTGATTGAATTTGCTGTGTT+TGG + chr2_4:62755462-62755481 Msa0341260:intron 35.0%
!! AAAAAAGACCGGTTTGGTAA+TGG - chr2_4:62755700-62755719 None:intergenic 35.0%
TTGACTAAAAAAGACCGGTT+TGG - chr2_4:62755706-62755725 None:intergenic 35.0%
!!! TTTTTAGGGTCTGTTTGGTA+AGG - chr2_4:62755762-62755781 None:intergenic 35.0%
GTAGTGTTTGGTAAAACTAG+CGG - chr2_4:62755976-62755995 None:intergenic 35.0%
! GTTGATTCTAACTTGAAGCT+AGG + chr2_4:62756113-62756132 Msa0341260:intron 35.0%
!! AATTTTGACCACTCCAAATG+TGG - chr2_4:62756239-62756258 None:intergenic 35.0%
GTGGTCAAAATTGATTATCG+AGG + chr2_4:62756247-62756266 Msa0341260:intron 35.0%
AGAGATTAGTAATGCCTATG+AGG + chr2_4:62756615-62756634 Msa0341260:CDS 35.0%
GAGTTACATTAGAGACACAT+AGG + chr2_4:62756832-62756851 Msa0341260:intron 35.0%
!! ACACAACATAATGGGTGAAA+AGG - chr2_4:62756962-62756981 None:intergenic 35.0%
! CTTAAGCTCCTGTTTCATTT+TGG + chr2_4:62757249-62757268 Msa0341260:intron 35.0%
GTGATCTTCCAAAATGAAAC+AGG - chr2_4:62757260-62757279 None:intergenic 35.0%
TGCTATCAGATGACAAAAAG+AGG + chr2_4:62757362-62757381 Msa0341260:CDS 35.0%
GCTATCAGATGACAAAAAGA+GGG + chr2_4:62757363-62757382 Msa0341260:CDS 35.0%
! AGGGCTTTGTATGATCAATA+TGG + chr2_4:62757382-62757401 Msa0341260:CDS 35.0%
TTTGTATGATCAATATGGCG+AGG + chr2_4:62757387-62757406 Msa0341260:CDS 35.0%
AAGCATATTGAATACCGCAT+AGG - chr2_4:62757449-62757468 None:intergenic 35.0%
GAGTAAACGACAACTTCAAT+TGG - chr2_4:62757621-62757640 None:intergenic 35.0%
CCTTACATAAGCAGCAAAAA+TGG - chr2_4:62757651-62757670 None:intergenic 35.0%
!! CCATTTTTGCTGCTTATGTA+AGG + chr2_4:62757648-62757667 Msa0341260:intron 35.0%
!!! GACATTTTTTGGGCCAAATA+TGG + chr2_4:62757729-62757748 Msa0341260:CDS 35.0%
TTATCCACATCATAACTCAC+CGG - chr2_4:62757828-62757847 None:intergenic 35.0%
AATCATTTCCTTGGCAAACA+TGG - chr2_4:62757870-62757889 None:intergenic 35.0%
GAATTTCGATAGATCCCAAT+GGG + chr2_4:62757965-62757984 Msa0341260:intron 35.0%
AAGGAGTAAAGGAAAACCTA+GGG + chr2_4:62758060-62758079 Msa0341260:intron 35.0%
!!! AAGCATTAGATTTTGGAGCA+AGG - chr2_4:62758207-62758226 None:intergenic 35.0%
TGCTCCAAAATCTAATGCTT+TGG + chr2_4:62758207-62758226 Msa0341260:intron 35.0%
!! CCAACCAAAGCATTAGATTT+TGG - chr2_4:62758214-62758233 None:intergenic 35.0%
CCAAAATCTAATGCTTTGGT+TGG + chr2_4:62758211-62758230 Msa0341260:intron 35.0%
AAATCTAATGCTTTGGTTGG+GGG + chr2_4:62758214-62758233 Msa0341260:intron 35.0%
CCTCTTGTCAAAGTTATATG+CGG - chr2_4:62758304-62758323 None:intergenic 35.0%
!!! GAGTTTTCTGAGGCAATTTT+TGG + chr2_4:62758493-62758512 Msa0341260:CDS 35.0%
! AGGCATCACATGTTTCTAAA+TGG - chr2_4:62758543-62758562 None:intergenic 35.0%
! TTTTGTATGCTCTGCTAATG+TGG + chr2_4:62758723-62758742 Msa0341260:intron 35.0%
!!! AGCAAATGGGTTTTTTTTGC+AGG - chr2_4:62758862-62758881 None:intergenic 35.0%
AGTCATTTCATGCAGCAAAT+GGG - chr2_4:62758875-62758894 None:intergenic 35.0%
TAGTCATTTCATGCAGCAAA+TGG - chr2_4:62758876-62758895 None:intergenic 35.0%
!!! TATTTTTACTTTCTGGCTGG+AGG - chr2_4:62758942-62758961 None:intergenic 35.0%
TAATTGGCAACACGAATACA+AGG + chr2_4:62759127-62759146 Msa0341260:intron 35.0%
TTTCCTACAAAGTCTGGATT+GGG - chr2_4:62759237-62759256 None:intergenic 35.0%
! TTTTCCTACAAAGTCTGGAT+TGG - chr2_4:62759238-62759257 None:intergenic 35.0%
! AAACGTTTTCCTACAAAGTC+TGG - chr2_4:62759243-62759262 None:intergenic 35.0%
! GACTTTGTAGGAAAACGTTT+TGG + chr2_4:62759243-62759262 Msa0341260:intron 35.0%
ACATCCTTATGTTCGACTTT+GGG + chr2_4:62759288-62759307 Msa0341260:intron 35.0%
TATTCCCAAAGTCGAACATA+AGG - chr2_4:62759295-62759314 None:intergenic 35.0%
GTTTCAGTATGTCCAAATTG+TGG + chr2_4:62759451-62759470 Msa0341260:CDS 35.0%
TAAAGTTAAAGTTCCTCCTG+GGG + chr2_4:62759549-62759568 Msa0341260:CDS 35.0%
!! TATTTTAAGAGTCACTGGAG+AGG + chr2_4:62759585-62759604 Msa0341260:CDS 35.0%
!! ATTTTAAGAGTCACTGGAGA+GGG + chr2_4:62759586-62759605 Msa0341260:CDS 35.0%
GAAAGTCTTAGGCCAATTAT+TGG + chr2_4:62759670-62759689 Msa0341260:intron 35.0%
TAATTTGGTAGGGCTAAGTT+AGG - chr2_4:62759901-62759920 None:intergenic 35.0%
CCCTACCAAATTAACTTCTA+AGG + chr2_4:62759908-62759927 Msa0341260:intron 35.0%
CCTCACCTTAGAAGTTAATT+TGG - chr2_4:62759916-62759935 None:intergenic 35.0%
!! CCAAATTAACTTCTAAGGTG+AGG + chr2_4:62759913-62759932 Msa0341260:intron 35.0%
TAGGTTGTGCTAATAAAGCT+TGG - chr2_4:62759944-62759963 None:intergenic 35.0%
!! AAGCTTTATTAGCACAACCT+AGG + chr2_4:62759943-62759962 Msa0341260:intron 35.0%
TTCCACATAGACAAGAGATA+TGG - chr2_4:62759969-62759988 None:intergenic 35.0%
! ATTAATATGGGTGGAGTACT+AGG + chr2_4:62760036-62760055 Msa0341260:intron 35.0%
! TTAATATGGGTGGAGTACTA+GGG + chr2_4:62760037-62760056 Msa0341260:intron 35.0%
! ATATATGGAGTAGGCTTTGA+AGG - chr2_4:62760290-62760309 None:intergenic 35.0%
TTTAACAATGTTGCATCCCA+AGG - chr2_4:62760503-62760522 None:intergenic 35.0%
!! ATATATCCTCTTTGGAGTCA+TGG + chr2_4:62760671-62760690 Msa0341260:intron 35.0%
! ATTTTTCCATGACTCCAAAG+AGG - chr2_4:62760680-62760699 None:intergenic 35.0%
GGAGTCATGGAAAAATGAAT+TGG + chr2_4:62760684-62760703 Msa0341260:intron 35.0%
AGATATACGTAAAGATCTCC+TGG - chr2_4:62760962-62760981 None:intergenic 35.0%
AACTGATTGATATTGTCGAG+CGG - chr2_4:62761030-62761049 None:intergenic 35.0%
CAGTTATCTAGAAGCTATAC+TGG + chr2_4:62761045-62761064 Msa0341260:CDS 35.0%
GTTATCTAGAAGCTATACTG+GGG + chr2_4:62761047-62761066 Msa0341260:CDS 35.0%
! TTTTGCTTCTTTTTGTAGGC+TGG + chr2_4:62761125-62761144 Msa0341260:intron 35.0%
CGAGGATAACAAAGAAAACA+AGG - chr2_4:62761222-62761241 None:intergenic 35.0%
GTCCAACTAGTTACATTCAA+GGG - chr2_4:62761383-62761402 None:intergenic 35.0%
TGTCCAACTAGTTACATTCA+AGG - chr2_4:62761384-62761403 None:intergenic 35.0%
GACTAAAACTGAAAACAGTC+TGG + chr2_4:62761505-62761524 Msa0341260:intron 35.0%
ACTTTGCATCTTCAGTTCAA+AGG + chr2_4:62762057-62762076 Msa0341260:intron 35.0%
AGAAAGAACAACATACTGGA+AGG - chr2_4:62762157-62762176 None:intergenic 35.0%
TGTTCCTATGACTGTAAGAT+GGG - chr2_4:62762181-62762200 None:intergenic 35.0%
TTGTTCCTATGACTGTAAGA+TGG - chr2_4:62762182-62762201 None:intergenic 35.0%
TCTTCATCTTCTGATTTCTC+TGG - chr2_4:62762414-62762433 None:intergenic 35.0%
CAGAAGATGAAGATGACTTA+TGG + chr2_4:62762421-62762440 Msa0341260:CDS 35.0%
! CACTTTAAAAGAGTCATGCT+TGG - chr2_4:62762581-62762600 None:intergenic 35.0%
AGTACATAAGGAAAAGGACA+TGG - chr2_4:62762663-62762682 None:intergenic 35.0%
!!! TCATACCCGAGATTTTTTGT+TGG + chr2_4:62762750-62762769 Msa0341260:intron 35.0%
! TTTTCTCGTTCATCAAACCT+TGG + chr2_4:62762904-62762923 Msa0341260:intron 35.0%
ATTAAACCACTGAAACTTGC+AGG + chr2_4:62762954-62762973 Msa0341260:intron 35.0%
!! TGCACTTGTAAATTTTGGCA+CGG + chr2_4:62763217-62763236 Msa0341260:three_prime_UTR 35.0%
!!! GTAGAGTAACGTTTTGAAGA+AGG - chr2_4:62763396-62763415 None:intergenic 35.0%
! CTTTCATTCTTTTGACCATG+AGG + chr2_4:62763447-62763466 Msa0341260:three_prime_UTR 35.0%
GCAATAAGCCACAACTTATC+TGG + chr2_4:62754673-62754692 Msa0341260:five_prime_UTR 40.0%
CACAACTACCAGATAAGTTG+TGG - chr2_4:62754684-62754703 None:intergenic 40.0%
CACAACTTATCTGGTAGTTG+TGG + chr2_4:62754682-62754701 Msa0341260:five_prime_UTR 40.0%
TACCCACTAACAATTCAAGC+GGG + chr2_4:62754798-62754817 Msa0341260:five_prime_UTR 40.0%
AATGAATGAGATGAAGGTGG+TGG - chr2_4:62754940-62754959 None:intergenic 40.0%
CATTCATTATTCTGTACCGG+AGG + chr2_4:62754952-62754971 Msa0341260:CDS 40.0%
TTGGAGAAAGTGGAAGAAGA+AGG - chr2_4:62755024-62755043 None:intergenic 40.0%
! GGCTTTGATTTCTTTACCAG+TGG - chr2_4:62755148-62755167 None:intergenic 40.0%
AAATCAAAGCCGCTTATCGA+AGG + chr2_4:62755157-62755176 Msa0341260:CDS 40.0%
GAAAGTGACCATTACCAAAC+CGG + chr2_4:62755689-62755708 Msa0341260:intron 40.0%
!!! GGTCTTTTTTAGGGTCTGTT+TGG - chr2_4:62755767-62755786 None:intergenic 40.0%
GACCCTAAAAAAGACCCATT+TGG + chr2_4:62755771-62755790 Msa0341260:intron 40.0%
! AGCTAGCTTATAGCTGATAG+CGG - chr2_4:62756020-62756039 None:intergenic 40.0%
! ATTGATAACCTAGCTCGTAG+TGG - chr2_4:62756053-62756072 None:intergenic 40.0%
AGAATCAACTCTGCAGACTA+AGG - chr2_4:62756102-62756121 None:intergenic 40.0%
TGTTTGTTCCACATTTGGAG+TGG + chr2_4:62756228-62756247 Msa0341260:intron 40.0%
GTATCATCCTGATGTGAACA+AGG + chr2_4:62756567-62756586 Msa0341260:intron 40.0%
!! ATCAGCTGAGTTTTTGACTG+AGG + chr2_4:62756745-62756764 Msa0341260:intron 40.0%
!! TCAGCTGAGTTTTTGACTGA+GGG + chr2_4:62756746-62756765 Msa0341260:intron 40.0%
CATTAGAGACACATAGGCTT+TGG + chr2_4:62756838-62756857 Msa0341260:intron 40.0%
GCAAGCATGTAAGAAAACCT+TGG - chr2_4:62756931-62756950 None:intergenic 40.0%
!! CACTTTACTAGCCTTTGACT+TGG - chr2_4:62757041-62757060 None:intergenic 40.0%
TCGCATGTTGCCTTCTTTAT+GGG + chr2_4:62757577-62757596 Msa0341260:intron 40.0%
!!! TTTTTTGGGCCAAATATGGG+CGG + chr2_4:62757733-62757752 Msa0341260:CDS 40.0%
! TTTTCTACCATGGATCCATC+TGG + chr2_4:62757757-62757776 Msa0341260:CDS 40.0%
CGTCGTAGTACTGTTACTAA+GGG + chr2_4:62757793-62757812 Msa0341260:CDS 40.0%
TTACTAAGGGTGAAGACATC+CGG + chr2_4:62757806-62757825 Msa0341260:CDS 40.0%
CGAATTTCGATAGATCCCAA+TGG + chr2_4:62757964-62757983 Msa0341260:intron 40.0%
!! TTGGTCATTGATTCCTACAG+AGG + chr2_4:62758032-62758051 Msa0341260:intron 40.0%
GATTCCTACAGAGGATTTCA+AGG + chr2_4:62758041-62758060 Msa0341260:intron 40.0%
TACTCCTTGAAATCCTCTGT+AGG - chr2_4:62758048-62758067 None:intergenic 40.0%
CAGAGGATTTCAAGGAGTAA+AGG + chr2_4:62758049-62758068 Msa0341260:intron 40.0%
CAAGGAGTAAAGGAAAACCT+AGG + chr2_4:62758059-62758078 Msa0341260:intron 40.0%
CCGCATATAACTTTGACAAG+AGG + chr2_4:62758301-62758320 Msa0341260:intron 40.0%
CAACAGGTATGATTTCTCCT+TGG + chr2_4:62758471-62758490 Msa0341260:intron 40.0%
! TTTCTCCTTGGAGTTTTCTG+AGG + chr2_4:62758483-62758502 Msa0341260:CDS 40.0%
AATTGCCTCAGAAAACTCCA+AGG - chr2_4:62758491-62758510 None:intergenic 40.0%
AGTGGAACATACTCTCATCT+TGG - chr2_4:62758593-62758612 None:intergenic 40.0%
! ATGAGAGTATGTTCCACTTG+TGG + chr2_4:62758595-62758614 Msa0341260:CDS 40.0%
!! CAACCCAAAAGGTGTTTGTT+CGG - chr2_4:62758644-62758663 None:intergenic 40.0%
GGTCGTATATTACAGGAATG+TGG - chr2_4:62758914-62758933 None:intergenic 40.0%
GGACTATGGTCGTATATTAC+AGG - chr2_4:62758921-62758940 None:intergenic 40.0%
TTCCTACAAAGTCTGGATTG+GGG - chr2_4:62759236-62759255 None:intergenic 40.0%
!!! ACGTTTTGGTTGTTGTTTGC+TGG + chr2_4:62759257-62759276 Msa0341260:intron 40.0%
!!! TTTTGGTTGTTGTTTGCTGG+TGG + chr2_4:62759260-62759279 Msa0341260:intron 40.0%
GACATCCTTATGTTCGACTT+TGG + chr2_4:62759287-62759306 Msa0341260:intron 40.0%
TCAGTATGTCCAAATTGTGG+AGG + chr2_4:62759454-62759473 Msa0341260:CDS 40.0%
!! GGCAGTATTTTAAGAGTCAC+TGG + chr2_4:62759580-62759599 Msa0341260:CDS 40.0%
ATGGAAACATATACGGCATG+TGG - chr2_4:62759748-62759767 None:intergenic 40.0%
ATAGACAAGAGATATGGCCT+AGG - chr2_4:62759963-62759982 None:intergenic 40.0%
AAAGCGCGAATTAATATGGG+TGG + chr2_4:62760027-62760046 Msa0341260:intron 40.0%
! TCTCCTTTCTAAAGATGCTC+GGG - chr2_4:62760142-62760161 None:intergenic 40.0%
! GTCTCCTTTCTAAAGATGCT+CGG - chr2_4:62760143-62760162 None:intergenic 40.0%
AAGGGATGAAAAGTCCTGTA+AGG + chr2_4:62760171-62760190 Msa0341260:intron 40.0%
!!! CGTTAAGCTCGTGTTTTGAT+GGG - chr2_4:62760224-62760243 None:intergenic 40.0%
!! TCGTTAAGCTCGTGTTTTGA+TGG - chr2_4:62760225-62760244 None:intergenic 40.0%
ACGATCCAACATAAGACAAC+AGG + chr2_4:62760241-62760260 Msa0341260:intron 40.0%
ATCCAACATAAGACAACAGG+AGG + chr2_4:62760244-62760263 Msa0341260:intron 40.0%
TCCAACATAAGACAACAGGA+GGG + chr2_4:62760245-62760264 Msa0341260:intron 40.0%
ATCTCTTCCAGCTTAACAAG+AGG + chr2_4:62760458-62760477 Msa0341260:intron 40.0%
CAACTATTATGCCCTCTGTT+GGG - chr2_4:62760832-62760851 None:intergenic 40.0%
ACAACTATTATGCCCTCTGT+TGG - chr2_4:62760833-62760852 None:intergenic 40.0%
TATACGTAAAGATCTCCTGG+AGG - chr2_4:62760959-62760978 None:intergenic 40.0%
! TCTTTGTTATCCTCGAAACC+TGG + chr2_4:62761227-62761246 Msa0341260:intron 40.0%
TGATATTTGGGTGTCAACAC+TGG + chr2_4:62761637-62761656 Msa0341260:intron 40.0%
TTGATTGTAATGCCTCAAGG+TGG - chr2_4:62761750-62761769 None:intergenic 40.0%
! CTGTTGATTGTAATGCCTCA+AGG - chr2_4:62761753-62761772 None:intergenic 40.0%
! ACATTTTCCGGCACTTAAAC+AGG + chr2_4:62761776-62761795 Msa0341260:intron 40.0%
GTCTTTACCTGTTTAAGTGC+CGG - chr2_4:62761786-62761805 None:intergenic 40.0%
GGCACTTAAACAGGTAAAGA+CGG + chr2_4:62761785-62761804 Msa0341260:intron 40.0%
AAACAGGTAAAGACGGTTGA+AGG + chr2_4:62761792-62761811 Msa0341260:intron 40.0%
TTAAACAGACCGTCAATACG+TGG + chr2_4:62761891-62761910 Msa0341260:CDS 40.0%
GAACTGAAGATGCAAAGTAG+AGG - chr2_4:62762055-62762074 None:intergenic 40.0%
! CTTGAAGAACTTGCTTCTCT+AGG + chr2_4:62762091-62762110 Msa0341260:CDS 40.0%
! GGGATTTTGAATGACTGCTT+GGG - chr2_4:62762120-62762139 None:intergenic 40.0%
GAACAACATACTGGAAGGTT+GGG - chr2_4:62762152-62762171 None:intergenic 40.0%
AGAACAACATACTGGAAGGT+TGG - chr2_4:62762153-62762172 None:intergenic 40.0%
GTTCCTATGACTGTAAGATG+GGG - chr2_4:62762180-62762199 None:intergenic 40.0%
GCTGCAGAAGATAAATACAG+TGG - chr2_4:62762327-62762346 None:intergenic 40.0%
CTGTATTTATCTTCTGCAGC+CGG + chr2_4:62762327-62762346 Msa0341260:intron 40.0%
! TTTTCTGTGACTGTTGCTGT+TGG - chr2_4:62762390-62762409 None:intergenic 40.0%
!! TAGCAAATGGAGCTCTAAAG+TGG + chr2_4:62762981-62763000 Msa0341260:CDS 40.0%
TTACAACACTAGCCCTAATC+AGG - chr2_4:62763071-62763090 None:intergenic 40.0%
TCATATAGTCTCTCCCCTTT+CGG - chr2_4:62763113-62763132 None:intergenic 40.0%
!! GCACTTGTAAATTTTGGCAC+GGG + chr2_4:62763218-62763237 Msa0341260:three_prime_UTR 40.0%
!! CACTTGTAAATTTTGGCACG+GGG + chr2_4:62763219-62763238 Msa0341260:three_prime_UTR 40.0%
AGCTATGCAACAAACGAATG+AGG - chr2_4:62763426-62763445 None:intergenic 40.0%
!! TCAACTGGAGTACTGGCATT+GGG - chr2_4:62754740-62754759 None:intergenic 45.0%
!! TCTTTACCAGTGGCGGATTT+GGG - chr2_4:62755138-62755157 None:intergenic 45.0%
!! TTCTTTACCAGTGGCGGATT+TGG - chr2_4:62755139-62755158 None:intergenic 45.0%
ACGAGCTAACCTTCGATAAG+CGG - chr2_4:62755169-62755188 None:intergenic 45.0%
! TTATCGAAGGTTAGCTCGTC+AGG + chr2_4:62755170-62755189 Msa0341260:CDS 45.0%
! TGATTTAGGGTCTGTTTGGC+TGG + chr2_4:62755342-62755361 Msa0341260:intron 45.0%
TCAGTTATCCACTACGAGCT+AGG + chr2_4:62756042-62756061 Msa0341260:intron 45.0%
CTGCAGACTAAGGCTATGTT+TGG - chr2_4:62756092-62756111 None:intergenic 45.0%
! GTAGCTTTTGACGCCAAACA+TGG + chr2_4:62756140-62756159 Msa0341260:intron 45.0%
CTGATGTGAACAAGGAACCT+GGG + chr2_4:62756575-62756594 Msa0341260:CDS 45.0%
TGATGTGAACAAGGAACCTG+GGG + chr2_4:62756576-62756595 Msa0341260:CDS 45.0%
TTAAACTTGTCAGTTGCCCC+AGG - chr2_4:62756595-62756614 None:intergenic 45.0%
TATGATCAATATGGCGAGGC+AGG + chr2_4:62757391-62757410 Msa0341260:CDS 45.0%
GCAGGAGTTAAGAGTTCAGT+CGG + chr2_4:62757409-62757428 Msa0341260:CDS 45.0%
GTCGCATGTTGCCTTCTTTA+TGG + chr2_4:62757576-62757595 Msa0341260:intron 45.0%
GTAGAAAAGCCGCCCATATT+TGG - chr2_4:62757745-62757764 None:intergenic 45.0%
ACCATGGATCCATCTGGATT+TGG + chr2_4:62757763-62757782 Msa0341260:CDS 45.0%
ATCCATCTGGATTTGGCACT+CGG + chr2_4:62757770-62757789 Msa0341260:CDS 45.0%
GCGTCGTAGTACTGTTACTA+AGG + chr2_4:62757792-62757811 Msa0341260:CDS 45.0%
ACATCCGGTGAGTTATGATG+TGG + chr2_4:62757821-62757840 Msa0341260:intron 45.0%
TCTTCTAGCCATGTTTGCCA+AGG + chr2_4:62757859-62757878 Msa0341260:intron 45.0%
TGGATCAAACACTGCCCATT+GGG - chr2_4:62757982-62758001 None:intergenic 45.0%
ATGGATCAAACACTGCCCAT+TGG - chr2_4:62757983-62758002 None:intergenic 45.0%
GAAACATGTGATGCCTGTAC+TGG + chr2_4:62758547-62758566 Msa0341260:CDS 45.0%
!! ACTGGTACTGGTGCAAAGTT+AGG + chr2_4:62758565-62758584 Msa0341260:CDS 45.0%
AGAGTATGTTCCACTTGTGG+TGG + chr2_4:62758598-62758617 Msa0341260:CDS 45.0%
! AGGACCGAACAAACACCTTT+TGG + chr2_4:62758637-62758656 Msa0341260:CDS 45.0%
! GGACCGAACAAACACCTTTT+GGG + chr2_4:62758638-62758657 Msa0341260:CDS 45.0%
!!! ACCTTTTGGGTTGTTCTCAC+AGG + chr2_4:62758651-62758670 Msa0341260:CDS 45.0%
ACCTGTGAGAACAACCCAAA+AGG - chr2_4:62758655-62758674 None:intergenic 45.0%
! TCCTACAAAGTCTGGATTGG+GGG - chr2_4:62759235-62759254 None:intergenic 45.0%
TGTCCAAATTGTGGAGGTGA+CGG + chr2_4:62759460-62759479 Msa0341260:CDS 45.0%
GAAAGTTGCCGTAAATGCAG+CGG + chr2_4:62759496-62759515 Msa0341260:CDS 45.0%
AAAGTTGCCGTAAATGCAGC+GGG + chr2_4:62759497-62759516 Msa0341260:CDS 45.0%
GGCCATATCTCTTGTCTATG+TGG + chr2_4:62759964-62759983 Msa0341260:intron 45.0%
! TTCTAAAGATGCTCGGGAAC+TGG - chr2_4:62760136-62760155 None:intergenic 45.0%
! GTTCCCGAGCATCTTTAGAA+AGG + chr2_4:62760136-62760155 Msa0341260:intron 45.0%
ACCCTCCTGTTGTCTTATGT+TGG - chr2_4:62760249-62760268 None:intergenic 45.0%
CATCTCATCCAAGTGCTCTT+GGG - chr2_4:62760431-62760450 None:intergenic 45.0%
AGCACTTGGATGAGATGGTA+AGG + chr2_4:62760434-62760453 Msa0341260:intron 45.0%
GCACTTGGATGAGATGGTAA+GGG + chr2_4:62760435-62760454 Msa0341260:intron 45.0%
TGGGTTTGAATCCAAGCCTT+GGG + chr2_4:62760484-62760503 Msa0341260:intron 45.0%
TAGAGACTAATTCCTCGAGC+CGG - chr2_4:62760565-62760584 None:intergenic 45.0%
TCATGTTCCTTCCCAACAGA+GGG + chr2_4:62760818-62760837 Msa0341260:intron 45.0%
TATTATGCCCTCTGTTGGGA+AGG - chr2_4:62760828-62760847 None:intergenic 45.0%
CTTGATGTGCTTGAGATACC+AGG + chr2_4:62760980-62760999 Msa0341260:CDS 45.0%
TATACTGGGGTCTGTAGTGA+AGG + chr2_4:62761060-62761079 Msa0341260:CDS 45.0%
GGCCCTTGAATGTAACTAGT+TGG + chr2_4:62761378-62761397 Msa0341260:intron 45.0%
ACATTGATGTCACCACCTTG+AGG + chr2_4:62761735-62761754 Msa0341260:intron 45.0%
TCTGAACTACAAATCCCTGC+TGG + chr2_4:62761819-62761838 Msa0341260:CDS 45.0%
AAGTGGTCACCACGTATTGA+CGG - chr2_4:62761903-62761922 None:intergenic 45.0%
! CGGGATTTTGAATGACTGCT+TGG - chr2_4:62762121-62762140 None:intergenic 45.0%
GTCATTCAAAATCCCGTCCT+AGG + chr2_4:62762125-62762144 Msa0341260:CDS 45.0%
GGGGAGAAAGAACAACATAC+TGG - chr2_4:62762161-62762180 None:intergenic 45.0%
TCTCCCCATCTTACAGTCAT+AGG + chr2_4:62762174-62762193 Msa0341260:intron 45.0%
TGCAGGACTTTCCTTACTTC+CGG - chr2_4:62762349-62762368 None:intergenic 45.0%
GGAAAGTCCTGCAGTTCAAA+TGG + chr2_4:62762356-62762375 Msa0341260:CDS 45.0%
! GACTGTTGCTGTTGGACTTT+CGG - chr2_4:62762382-62762401 None:intergenic 45.0%
TACAGACCTGCAAGTTTCAG+TGG - chr2_4:62762963-62762982 None:intergenic 45.0%
ACTTGCAGGTCTGTAGCAAA+TGG + chr2_4:62762968-62762987 Msa0341260:intron 45.0%
GTAATGATTCGAACAGCTGC+TGG + chr2_4:62763087-62763106 Msa0341260:three_prime_UTR 45.0%
TCTAGTGCAACCTCTTCAAG+GGG - chr2_4:62763284-62763303 None:intergenic 45.0%
CTCTAGTGCAACCTCTTCAA+GGG - chr2_4:62763285-62763304 None:intergenic 45.0%
TCTCTAGTGCAACCTCTTCA+AGG - chr2_4:62763286-62763305 None:intergenic 45.0%
!!! ATATTTTGTATATTTAATAT+TGG + chr2_4:62758367-62758386 Msa0341260:intron 5.0%
!!! TTATAATTTTTTTTGATATT+TGG + chr2_4:62761624-62761643 Msa0341260:intron 5.0%
!!! TATAATTTTTTTTGATATTT+GGG + chr2_4:62761625-62761644 Msa0341260:intron 5.0%
!!! TTTAACTTTTTTTTTTTTTT+TGG + chr2_4:62761705-62761724 Msa0341260:intron 5.0%
!!! TTAACTTTTTTTTTTTTTTT+GGG + chr2_4:62761706-62761725 Msa0341260:intron 5.0%
CAGAGAGGAAGAGACTGAGT+GGG - chr2_4:62754710-62754729 None:intergenic 50.0%
GCATTGGGTACATACCAGAG+AGG - chr2_4:62754725-62754744 None:intergenic 50.0%
!! CTCAACTGGAGTACTGGCAT+TGG - chr2_4:62754741-62754760 None:intergenic 50.0%
!! TCGGGTTTTATGGGTTCTGC+TGG - chr2_4:62754764-62754783 None:intergenic 50.0%
CGCCCGCTTGAATTGTTAGT+GGG - chr2_4:62754803-62754822 None:intergenic 50.0%
ACGCCCGCTTGAATTGTTAG+TGG - chr2_4:62754804-62754823 None:intergenic 50.0%
! GAATGAGATGAAGGTGGTGG+TGG - chr2_4:62754937-62754956 None:intergenic 50.0%
GGAACGGAGATGAATTCCTC+CGG - chr2_4:62754971-62754990 None:intergenic 50.0%
CCAGGTTCCTTGTTCACATC+AGG - chr2_4:62756577-62756596 None:intergenic 50.0%
CCTGATGTGAACAAGGAACC+TGG + chr2_4:62756574-62756593 Msa0341260:CDS 50.0%
GGAGTTAAGAGTTCAGTCGG+AGG + chr2_4:62757412-62757431 Msa0341260:CDS 50.0%
GTTAAGAGTTCAGTCGGAGG+AGG + chr2_4:62757415-62757434 Msa0341260:CDS 50.0%
AGGAGGATCAAGTGCCTATG+CGG + chr2_4:62757432-62757451 Msa0341260:CDS 50.0%
! TATGGGCGGCTTTTCTACCA+TGG + chr2_4:62757747-62757766 Msa0341260:CDS 50.0%
GCCAAATCCAGATGGATCCA+TGG - chr2_4:62757767-62757786 None:intergenic 50.0%
TCTAATGCTTTGGTTGGGGG+TGG + chr2_4:62758217-62758236 Msa0341260:intron 50.0%
CTAATGCTTTGGTTGGGGGT+GGG + chr2_4:62758218-62758237 Msa0341260:intron 50.0%
! TGTGATGCCTGTACTGGTAC+TGG + chr2_4:62758553-62758572 Msa0341260:CDS 50.0%
CTTTGCACCAGTACCAGTAC+AGG - chr2_4:62758563-62758582 None:intergenic 50.0%
TATGTTCCACTTGTGGTGGC+AGG + chr2_4:62758602-62758621 Msa0341260:CDS 50.0%
ATGTTCCACTTGTGGTGGCA+GGG + chr2_4:62758603-62758622 Msa0341260:CDS 50.0%
!! ACTTTCTGGCTGGAGGACTA+TGG - chr2_4:62758935-62758954 None:intergenic 50.0%
! CCTACAAAGTCTGGATTGGG+GGG - chr2_4:62759234-62759253 None:intergenic 50.0%
GTCCAAATTGTGGAGGTGAC+GGG + chr2_4:62759461-62759480 Msa0341260:CDS 50.0%
TCCAAATTGTGGAGGTGACG+GGG + chr2_4:62759462-62759481 Msa0341260:CDS 50.0%
AAGTTGCCGTAAATGCAGCG+GGG + chr2_4:62759498-62759517 Msa0341260:CDS 50.0%
GAAAGCTGGACTTGCCTTAC+AGG - chr2_4:62760188-62760207 None:intergenic 50.0%
AAGGCAAGTCCAGCTTTCCA+CGG + chr2_4:62760190-62760209 Msa0341260:intron 50.0%
TTTGATGGGACGTTTGTCCG+TGG - chr2_4:62760210-62760229 None:intergenic 50.0%
CCATCTCATCCAAGTGCTCT+TGG - chr2_4:62760432-62760451 None:intergenic 50.0%
!! CCAAGAGCACTTGGATGAGA+TGG + chr2_4:62760429-62760448 Msa0341260:intron 50.0%
TCCAGCTTAACAAGAGGTCC+TGG + chr2_4:62760464-62760483 Msa0341260:intron 50.0%
CCAGCTTAACAAGAGGTCCT+GGG + chr2_4:62760465-62760484 Msa0341260:intron 50.0%
CAAGGCTTGGATTCAAACCC+AGG - chr2_4:62760485-62760504 None:intergenic 50.0%
CTGGGTTTGAATCCAAGCCT+TGG + chr2_4:62760483-62760502 Msa0341260:intron 50.0%
CAATGTTGCATCCCAAGGCT+TGG - chr2_4:62760498-62760517 None:intergenic 50.0%
AGAGACTAATTCCTCGAGCC+GGG - chr2_4:62760564-62760583 None:intergenic 50.0%
CTCATGTTCCTTCCCAACAG+AGG + chr2_4:62760817-62760836 Msa0341260:intron 50.0%
ACATTAGGGCACATCATGCC+AGG - chr2_4:62761255-62761274 None:intergenic 50.0%
! CTTCAGTTCAAAGGAGCGTG+AGG + chr2_4:62762066-62762085 Msa0341260:intron 50.0%
ATACTGGAAGGTTGGGTCCT+AGG - chr2_4:62762145-62762164 None:intergenic 50.0%
ATCTTCTGCAGCCGGAAGTA+AGG + chr2_4:62762335-62762354 Msa0341260:intron 50.0%
CTTTCGGCCATTTGAACTGC+AGG - chr2_4:62762366-62762385 None:intergenic 50.0%
!!! TATTTTGGCCCCCCTTGAAG+AGG + chr2_4:62763271-62763290 Msa0341260:three_prime_UTR 50.0%
TAGTGCAACCTCTTCAAGGG+GGG - chr2_4:62763282-62763301 None:intergenic 50.0%
CTAGTGCAACCTCTTCAAGG+GGG - chr2_4:62763283-62763302 None:intergenic 50.0%
CCAGAGAGGAAGAGACTGAG+TGG - chr2_4:62754711-62754730 None:intergenic 55.0%
CCACTCAGTCTCTTCCTCTC+TGG + chr2_4:62754708-62754727 Msa0341260:five_prime_UTR 55.0%
!! TGCTGGCTCAACTGGAGTAC+TGG - chr2_4:62754747-62754766 None:intergenic 55.0%
!! ATGGGTTCTGCTGGCTCAAC+TGG - chr2_4:62754755-62754774 None:intergenic 55.0%
!! GATGAAGGTGGTGGTGGAAG+TGG - chr2_4:62754931-62754950 None:intergenic 55.0%
!! GGTGGGTGGTGGAAGAATCA+GGG + chr2_4:62758235-62758254 Msa0341260:intron 55.0%
!! GTGGGTGGTGGAAGAATCAG+GGG + chr2_4:62758236-62758255 Msa0341260:intron 55.0%
TGTTCCACTTGTGGTGGCAG+GGG + chr2_4:62758604-62758623 Msa0341260:CDS 55.0%
CGAACTGCATCCTGCTGATG+CGG + chr2_4:62758781-62758800 Msa0341260:intron 55.0%
AGCTAGATTGCCGCATCAGC+AGG - chr2_4:62758794-62758813 None:intergenic 55.0%
CCCCCCAATCCAGACTTTGT+AGG + chr2_4:62759231-62759250 Msa0341260:intron 55.0%
TCCCCGTCACCTCCACAATT+TGG - chr2_4:62759466-62759485 None:intergenic 55.0%
GTCCTTCCCCGCTGCATTTA+CGG - chr2_4:62759507-62759526 None:intergenic 55.0%
AGGGTGATGCTGGACCAAGA+GGG + chr2_4:62759605-62759624 Msa0341260:CDS 55.0%
GACGTTTGTCCGTGGAAAGC+TGG - chr2_4:62760202-62760221 None:intergenic 55.0%
!! GTTGTCGACCCAAGAGCACT+TGG + chr2_4:62760420-62760439 Msa0341260:intron 55.0%
CCCAGGACCTCTTGTTAAGC+TGG - chr2_4:62760468-62760487 None:intergenic 55.0%
ACTAATTCCTCGAGCCGGGT+AGG - chr2_4:62760560-62760579 None:intergenic 55.0%
TGTCATAACAGGGGTCCTCC+AGG + chr2_4:62760941-62760960 Msa0341260:intron 55.0%
TATCCTCGAAACCTGGCACC+TGG + chr2_4:62761234-62761253 Msa0341260:intron 55.0%
GACGAGGACATCTCCAGGTT+GGG - chr2_4:62761847-62761866 None:intergenic 55.0%
GAGATGTCCTCGTCCTTGCA+AGG + chr2_4:62761853-62761872 Msa0341260:CDS 55.0%
TGTCCTCGTCCTTGCAAGGA+AGG + chr2_4:62761857-62761876 Msa0341260:CDS 55.0%
GTCCTCGTCCTTGCAAGGAA+GGG + chr2_4:62761858-62761877 Msa0341260:CDS 55.0%
TCGGTACACCCTTCCTTGCA+AGG - chr2_4:62761869-62761888 None:intergenic 55.0%
TGGAAGGTTGGGTCCTAGGA+CGG - chr2_4:62762141-62762160 None:intergenic 55.0%
CGCCGAGTGCCAAATCCAGA+TGG - chr2_4:62757775-62757794 None:intergenic 60.0%
ATGCTTTGGTTGGGGGTGGG+TGG + chr2_4:62758221-62758240 Msa0341260:intron 60.0%
!! GGGTGGGTGGTGGAAGAATC+AGG + chr2_4:62758234-62758253 Msa0341260:intron 60.0%
TGCCGTAAATGCAGCGGGGA+AGG + chr2_4:62759502-62759521 Msa0341260:CDS 60.0%
ATACTGCCTGCGCTAACCCC+AGG - chr2_4:62759568-62759587 None:intergenic 60.0%
GTCACTGGAGAGGGTGATGC+TGG + chr2_4:62759595-62759614 Msa0341260:CDS 60.0%
GAGGGTGATGCTGGACCAAG+AGG + chr2_4:62759604-62759623 Msa0341260:CDS 60.0%
CCACCCATTGCGATCCTACC+CGG + chr2_4:62760543-62760562 Msa0341260:intron 60.0%
GAGCCGGGTAGGATCGCAAT+GGG - chr2_4:62760549-62760568 None:intergenic 60.0%
AGTTGCGCGCAGAGAACACC+CGG + chr2_4:62760586-62760605 Msa0341260:intron 60.0%
ATGCCAGGTGCCAGGTTTCG+AGG - chr2_4:62761240-62761259 None:intergenic 60.0%
ATCCCTGCTGGTACCCAACC+TGG + chr2_4:62761831-62761850 Msa0341260:CDS 60.0%
! CTCCAGGTTGGGTACCAGCA+GGG - chr2_4:62761836-62761855 None:intergenic 60.0%
! TCTCCAGGTTGGGTACCAGC+AGG - chr2_4:62761837-62761856 None:intergenic 60.0%
GGACGAGGACATCTCCAGGT+TGG - chr2_4:62761848-62761867 None:intergenic 60.0%
GCAAGGACGAGGACATCTCC+AGG - chr2_4:62761852-62761871 None:intergenic 60.0%
CACCCTTCCTTGCAAGGACG+AGG - chr2_4:62761863-62761882 None:intergenic 60.0%
GGAAGGTTGGGTCCTAGGAC+GGG - chr2_4:62762140-62762159 None:intergenic 60.0%
TCGAACAGCTGCTGGCCGAA+AGG + chr2_4:62763095-62763114 Msa0341260:three_prime_UTR 60.0%
CGAACAGCTGCTGGCCGAAA+GGG + chr2_4:62763096-62763115 Msa0341260:three_prime_UTR 60.0%
GAACAGCTGCTGGCCGAAAG+GGG + chr2_4:62763097-62763116 Msa0341260:three_prime_UTR 60.0%
GGCGTTCCCAAATCCGCCAC+TGG + chr2_4:62755129-62755148 Msa0341260:CDS 65.0%
CTTTGGTTGGGGGTGGGTGG+TGG + chr2_4:62758224-62758243 Msa0341260:intron 65.0%
CTGACCCCTGCCACCACAAG+TGG - chr2_4:62758611-62758630 None:intergenic 65.0%
CACTTGTGGTGGCAGGGGTC+AGG + chr2_4:62758609-62758628 Msa0341260:CDS 65.0%
GTGGCAGGGGTCAGGTGATG+AGG + chr2_4:62758617-62758636 Msa0341260:CDS 65.0%
GCAGCGGGGAAGGACGCATA+CGG + chr2_4:62759512-62759531 Msa0341260:CDS 65.0%
CAGCGGGGAAGGACGCATAC+GGG + chr2_4:62759513-62759532 Msa0341260:CDS 65.0%
! GTTCCTCCTGGGGTTAGCGC+AGG + chr2_4:62759559-62759578 Msa0341260:CDS 65.0%
CCGGGTAGGATCGCAATGGG+TGG - chr2_4:62760546-62760565 None:intergenic 65.0%
CGAGCCGGGTAGGATCGCAA+TGG - chr2_4:62760550-62760569 None:intergenic 65.0%
! TTGCGATCCTACCCGGCTCG+AGG + chr2_4:62760550-62760569 Msa0341260:intron 65.0%
GGCACATCATGCCAGGTGCC+AGG - chr2_4:62761248-62761267 None:intergenic 65.0%
CTGCCTGCGCTAACCCCAGG+AGG - chr2_4:62759565-62759584 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 62754670 62763482 62754670 ID=Msa0341260;Name=Msa0341260
chr2_4 mRNA 62754670 62763482 62754670 ID=Msa0341260-mRNA-1;Parent=Msa0341260;Name=Msa0341260-mRNA-1;_AED=0.02;_eAED=0.02;_QI=231|1|1|1|1|1|11|461|497
chr2_4 exon 62754670 62755191 62754670 ID=Msa0341260-mRNA-1:exon:19965;Parent=Msa0341260-mRNA-1
chr2_4 exon 62756568 62756636 62756568 ID=Msa0341260-mRNA-1:exon:19966;Parent=Msa0341260-mRNA-1
chr2_4 exon 62757361 62757453 62757361 ID=Msa0341260-mRNA-1:exon:19967;Parent=Msa0341260-mRNA-1
chr2_4 exon 62757706 62757827 62757706 ID=Msa0341260-mRNA-1:exon:19968;Parent=Msa0341260-mRNA-1
chr2_4 exon 62758477 62758672 62758477 ID=Msa0341260-mRNA-1:exon:19969;Parent=Msa0341260-mRNA-1
chr2_4 exon 62759451 62759626 62759451 ID=Msa0341260-mRNA-1:exon:19970;Parent=Msa0341260-mRNA-1
chr2_4 exon 62760952 62761081 62760952 ID=Msa0341260-mRNA-1:exon:19971;Parent=Msa0341260-mRNA-1
chr2_4 exon 62761798 62761958 62761798 ID=Msa0341260-mRNA-1:exon:19972;Parent=Msa0341260-mRNA-1
chr2_4 exon 62762072 62762160 62762072 ID=Msa0341260-mRNA-1:exon:19973;Parent=Msa0341260-mRNA-1
chr2_4 exon 62762346 62762466 62762346 ID=Msa0341260-mRNA-1:exon:19974;Parent=Msa0341260-mRNA-1
chr2_4 exon 62762976 62763482 62762976 ID=Msa0341260-mRNA-1:exon:19975;Parent=Msa0341260-mRNA-1
chr2_4 five_prime_UTR 62754670 62754900 62754670 ID=Msa0341260-mRNA-1:five_prime_utr;Parent=Msa0341260-mRNA-1
chr2_4 CDS 62754901 62755191 62754901 ID=Msa0341260-mRNA-1:cds;Parent=Msa0341260-mRNA-1
chr2_4 CDS 62756568 62756636 62756568 ID=Msa0341260-mRNA-1:cds;Parent=Msa0341260-mRNA-1
chr2_4 CDS 62757361 62757453 62757361 ID=Msa0341260-mRNA-1:cds;Parent=Msa0341260-mRNA-1
chr2_4 CDS 62757706 62757827 62757706 ID=Msa0341260-mRNA-1:cds;Parent=Msa0341260-mRNA-1
chr2_4 CDS 62758477 62758672 62758477 ID=Msa0341260-mRNA-1:cds;Parent=Msa0341260-mRNA-1
chr2_4 CDS 62759451 62759626 62759451 ID=Msa0341260-mRNA-1:cds;Parent=Msa0341260-mRNA-1
chr2_4 CDS 62760952 62761081 62760952 ID=Msa0341260-mRNA-1:cds;Parent=Msa0341260-mRNA-1
chr2_4 CDS 62761798 62761958 62761798 ID=Msa0341260-mRNA-1:cds;Parent=Msa0341260-mRNA-1
chr2_4 CDS 62762072 62762160 62762072 ID=Msa0341260-mRNA-1:cds;Parent=Msa0341260-mRNA-1
chr2_4 CDS 62762346 62762466 62762346 ID=Msa0341260-mRNA-1:cds;Parent=Msa0341260-mRNA-1
chr2_4 CDS 62762976 62763021 62762976 ID=Msa0341260-mRNA-1:cds;Parent=Msa0341260-mRNA-1
chr2_4 three_prime_UTR 62763022 62763482 62763022 ID=Msa0341260-mRNA-1:three_prime_utr;Parent=Msa0341260-mRNA-1
Gene Sequence

>Msa0341260

ATGGCAGTTATATCACTCTCTCTTCTTCCACTTCCACCACCACCTTCATCTCATTCATTATTCTGTACCGGAGGAATTCATCTCCGTTCCCACAACAATTTCCTTTCCATTCATTCTTCTCCTTCTTCTTCCACTTTCTCCAACTCTAATACTAAATTCTCTTCTGGTACTAGACCAAAACGCTTTTTCACTGTTTTCGCTGCTTCTTCTGATTATTACTCTACTCTCGGCGTTCCCAAATCCGCCACTGGTAAAGAAATCAAAGCCGCTTATCGAAGGTTAGCTCGTCAGTATCATCCTGATGTGAACAAGGAACCTGGGGCAACTGACAAGTTTAAAGAGATTAGTAATGCCTATGAGGTGCTATCAGATGACAAAAAGAGGGCTTTGTATGATCAATATGGCGAGGCAGGAGTTAAGAGTTCAGTCGGAGGAGGATCAAGTGCCTATGCGACAAATCCATTTGATTTATTTGAGACATTTTTTGGGCCAAATATGGGCGGCTTTTCTACCATGGATCCATCTGGATTTGGCACTCGGCGTCGTAGTACTGTTACTAAGGGTGAAGACATCCGGTATGATTTCTCCTTGGAGTTTTCTGAGGCAATTTTTGGAACAGAGAAAGAATTTGAGCTTTTCCATTTAGAAACATGTGATGCCTGTACTGGTACTGGTGCAAAGTTAGGCTCCAAGATGAGAGTATGTTCCACTTGTGGTGGCAGGGGTCAGGTGATGAGGACCGAACAAACACCTTTTGGGTTGTTCTCACAGGTTTCAGTATGTCCAAATTGTGGAGGTGACGGGGAAGTCATATCTGAAAGTTGCCGTAAATGCAGCGGGGAAGGACGCATACGGGTTAAGAAAAATATTAAAGTTAAAGTTCCTCCTGGGGTTAGCGCAGGCAGTATTTTAAGAGTCACTGGAGAGGGTGATGCTGGACCAAGAGGGGGTCCTCCAGGAGATCTTTACGTATATCTTGATGTGCTTGAGATACCAGGAATTCAAAGAGATGATATTAATCTCCGCTCGACAATATCAATCAGTTATCTAGAAGCTATACTGGGGTCTGTAGTGAAGGTAAAGACGGTTGAAGGCACTTCTGAACTACAAATCCCTGCTGGTACCCAACCTGGAGATGTCCTCGTCCTTGCAAGGAAGGGTGTACCGAAATTAAACAGACCGTCAATACGTGGTGACCACTTATTTACTGTTAAAGTTACAATACCAAAACGTATTAGTTCAAAGGAGCGTGAGGTGCTTGAAGAACTTGCTTCTCTAGGCAACCCAAGCAGTCATTCAAAATCCCGTCCTAGGACCCAACCTTCCACCGGAAGTAAGGAAAGTCCTGCAGTTCAAATGGCCGAAAGTCCAACAGCAACAGTCACAGAAAAACCAGAGAAATCAGAAGATGAAGATGACTTATGGAATAAACTAAAAAACGTGGCTGGGTCTGTAGCAAATGGAGCTCTAAAGTGGTTTAAAGACAATCTCTAG
Protein sequence

>Msa0341260

MAVISLSLLPLPPPPSSHSLFCTGGIHLRSHNNFLSIHSSPSSSTFSNSNTKFSSGTRPKRFFTVFAASSDYYSTLGVPKSATGKEIKAAYRRLARQYHPDVNKEPGATDKFKEISNAYEVLSDDKKRALYDQYGEAGVKSSVGGGSSAYATNPFDLFETFFGPNMGGFSTMDPSGFGTRRRSTVTKGEDIRYDFSLEFSEAIFGTEKEFELFHLETCDACTGTGAKLGSKMRVCSTCGGRGQVMRTEQTPFGLFSQVSVCPNCGGDGEVISESCRKCSGEGRIRVKKNIKVKVPPGVSAGSILRVTGEGDAGPRGGPPGDLYVYLDVLEIPGIQRDDINLRSTISISYLEAILGSVVKVKTVEGTSELQIPAGTQPGDVLVLARKGVPKLNRPSIRGDHLFTVKVTIPKRISSKEREVLEELASLGNPSSHSKSRPRTQPSTGSKESPAVQMAESPTATVTEKPEKSEDEDDLWNKLKNVAGSVANGALKWFKDNL*