AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1220230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1220230 MtrunA17_Chr4g0071101 88.564 752 69 6 1 743 1 744 0.0 1321
Msa1220230 MtrunA17_Chr1g0187011 49.597 621 272 5 144 745 187 785 0.0 595
Msa1220230 MtrunA17_Chr6g0484411 46.284 592 297 5 139 728 188 760 4.11e-161 486
Msa1220230 MtrunA17_Chr6g0451621 43.924 576 283 5 168 728 146 696 3.08e-147 457
Msa1220230 MtrunA17_Chr8g0366041 87.783 221 26 1 184 403 1 221 6.88e-131 387
Msa1220230 MtrunA17_Chr8g0391141 42.230 547 269 7 167 709 100 603 1.16e-130 401
Msa1220230 MtrunA17_Chr2g0330811 41.497 588 309 12 178 741 171 747 8.80e-122 382
Msa1220230 MtrunA17_Chr8g0366051 92.632 95 7 0 464 558 3 97 9.62e-52 175
Msa1220230 MtrunA17_Chr4g0067911 40.127 157 81 4 577 730 185 331 6.13e-24 103
Msa1220230 MtrunA17_Chr4g0033621 37.569 181 102 4 543 723 135 304 3.81e-23 103
Msa1220230 MtrunA17_Chr1g0171521 39.568 139 74 4 564 696 130 264 3.09e-21 94.4
Msa1220230 MtrunA17_Chr8g0391361 35.374 147 89 2 551 694 5 148 1.90e-20 89.4
Msa1220230 MtrunA17_Chr6g0449261 28.780 205 139 3 530 730 89 290 2.27e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1220230 AT4G29750.2 52.053 755 301 10 17 730 54 788 0.0 716
Msa1220230 AT4G29750.1 52.053 755 301 10 17 730 54 788 0.0 716
Msa1220230 AT3G23070.1 47.500 600 285 7 161 745 209 793 5.54e-176 527
Msa1220230 AT4G14510.1 47.360 625 275 9 161 745 210 820 1.83e-175 526
Msa1220230 AT3G18390.1 45.918 588 291 7 152 728 221 792 3.14e-163 493
Msa1220230 AT3G01370.1 43.072 599 318 6 160 747 153 739 2.04e-150 464
Msa1220230 AT5G16180.1 37.688 597 311 7 142 733 177 717 1.80e-110 352
Msa1220230 AT5G16180.2 36.019 422 210 6 142 559 177 542 2.43e-61 216
Msa1220230 AT3G25440.2 36.022 186 108 4 564 741 85 267 2.73e-26 112
Msa1220230 AT3G25440.4 37.576 165 95 3 580 739 13 174 3.10e-26 109
Msa1220230 AT3G25440.3 37.576 165 95 3 580 739 13 174 3.10e-26 109
Msa1220230 AT3G25440.5 37.576 165 95 3 580 739 13 174 3.10e-26 109
Msa1220230 AT3G25440.1 36.022 186 108 4 564 741 149 331 4.38e-26 112
Msa1220230 AT2G28480.1 37.569 181 102 4 543 723 126 295 2.61e-24 105
Msa1220230 AT4G13070.1 41.463 123 67 3 579 700 173 291 1.34e-20 94.4
Msa1220230 AT3G27550.2 30.573 157 103 2 577 730 133 286 1.31e-13 74.7
Msa1220230 AT3G27550.3 30.573 157 103 2 577 730 77 230 1.58e-13 74.3
Msa1220230 AT3G27550.1 30.573 157 103 2 577 730 77 230 1.58e-13 74.3

Find 189 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCGTGACAACAAGCTTT+TGG 0.215837 8_1:-83283838 None:intergenic
AACCTTACTTTCTAGAAATA+AGG 0.223126 8_1:+83282936 Msa1220230:CDS
AGGAATATATTGTAATTTAC+AGG 0.243412 8_1:+83282956 Msa1220230:CDS
GAAAATGTGGTTTAGGGTTT+TGG 0.268261 8_1:-83279373 None:intergenic
CAATTACCTGCTGTGGTTCC+AGG 0.270048 8_1:+83280750 Msa1220230:CDS
CACGATAAATAATTATTATA+TGG 0.271438 8_1:-83283782 None:intergenic
TGTGGTTGTTCCACTAGTTC+TGG 0.272480 8_1:-83279561 None:intergenic
TTCCCAACTTCTTGTTTACT+TGG 0.294491 8_1:-83283180 None:intergenic
CTTTCTCTTCCTCGTCTTGT+TGG 0.296198 8_1:-83283044 None:intergenic
CATCCTATCATTAGATGTAT+AGG 0.301240 8_1:-83281058 None:intergenic
ATGAAGCCATACTTACTTCT+AGG 0.301568 8_1:+83283497 Msa1220230:CDS
TAAGCATATTGCGATATCTT+TGG 0.302210 8_1:+83283710 Msa1220230:CDS
GGGACCATTTATGTCGAATT+TGG 0.303111 8_1:-83279464 None:intergenic
ATTTCACATGTTACATTACT+TGG 0.304112 8_1:-83284727 None:intergenic
AGGTTCAGTGTTGGAGTTGC+TGG 0.308508 8_1:+83279891 Msa1220230:CDS
ACACCATATATCAGATTTAC+AGG 0.309479 8_1:+83284088 Msa1220230:CDS
AATTGTTGAAAATGTGGTTT+AGG 0.317145 8_1:-83279380 None:intergenic
TTGTCTCTCAGTCAGGGTTT+TGG 0.325654 8_1:-83283007 None:intergenic
CTGACCAAATTCGACATAAA+TGG 0.334859 8_1:+83279460 Msa1220230:CDS
GAGATCTTTGTTTAGGAAGA+TGG 0.336007 8_1:+83283466 Msa1220230:CDS
AGCAGACCTTCCAACTGATT+TGG 0.336227 8_1:+83283424 Msa1220230:CDS
AAATTCTGGTGGTTCTGTTA+TGG 0.337329 8_1:+83279734 Msa1220230:CDS
ATTGAGAAGATAAACAATAA+TGG 0.340437 8_1:+83284596 Msa1220230:three_prime_UTR
TCTCCTGTAAATCTGATATA+TGG 0.341489 8_1:-83284091 None:intergenic
ATGAAGAGAGATCTTTGTTT+AGG 0.342661 8_1:+83283459 Msa1220230:CDS
CATGTCAGTCATTTCCTTGT+TGG 0.348961 8_1:-83280823 None:intergenic
TCTCAAATGCCGTTACTTGC+TGG 0.349600 8_1:+83283111 Msa1220230:CDS
TTCCTTATTTCTAGAAAGTA+AGG 0.350503 8_1:-83282938 None:intergenic
AAACGGGTACAGCGAAATTC+TGG 0.358562 8_1:+83279720 Msa1220230:CDS
AAATCAGTTGGAAGGTCTGC+TGG 0.363738 8_1:-83283422 None:intergenic
TGGGTCCGCGCTTCAAAGAT+TGG 0.371657 8_1:+83280694 Msa1220230:CDS
GAGGTTGTGGGTGTTCCTCT+TGG 0.371698 8_1:-83279587 None:intergenic
GATTTATGTGTGTTCTTGCT+TGG 0.372683 8_1:+83279008 None:intergenic
TTGCTTAATCAGAGTAAAAC+TGG 0.379063 8_1:+83280393 Msa1220230:intron
GTATTAGTAGTTTGAAGAAA+AGG 0.382826 8_1:+83279784 Msa1220230:CDS
TAGGGCAGCAACCGCCAATT+GGG 0.384752 8_1:+83283149 Msa1220230:CDS
AACCTTCTGTTGGATGAGTT+GGG 0.390797 8_1:+83280675 Msa1220230:CDS
TTGAGAAGATAAACAATAAT+GGG 0.392991 8_1:+83284597 Msa1220230:three_prime_UTR
TTCTTACCTAGAAGTAAGTA+TGG 0.393391 8_1:-83283503 None:intergenic
ATTCAGTGTTGAGTAGAGTT+TGG 0.394605 8_1:-83284266 None:intergenic
AAGGAGAAGTAATACTGAAT+TGG 0.396918 8_1:+83279803 Msa1220230:CDS
TGCTGGTATTACTCAGGAAT+TGG 0.397390 8_1:+83279908 Msa1220230:CDS
TTCCAAAGCGTTTATCTCCT+TGG 0.399056 8_1:+83279622 Msa1220230:CDS
CAACCTTCTGTTGGATGAGT+TGG 0.405542 8_1:+83280674 Msa1220230:CDS
TTTGGAAACTCAAAATTAAG+AGG 0.412179 8_1:-83279606 None:intergenic
ATCCTATCATTAGATGTATA+GGG 0.412690 8_1:-83281057 None:intergenic
CTAGGGCAGCAACCGCCAAT+TGG 0.414139 8_1:+83283148 Msa1220230:CDS
TTTCGGTATAAGAATGATGA+AGG 0.419967 8_1:+83284773 Msa1220230:three_prime_UTR
ATTGTTGAAAATGTGGTTTA+GGG 0.420323 8_1:-83279379 None:intergenic
AGGTTGTGGGTGTTCCTCTT+GGG 0.420559 8_1:-83279586 None:intergenic
GAGAAATACCTTGAGTTCTT+CGG 0.424079 8_1:-83281082 None:intergenic
AACTCAAAATTAAGAGGTTG+TGG 0.427382 8_1:-83279600 None:intergenic
CAACCAAGTAAACAAGAAGT+TGG 0.431444 8_1:+83283177 Msa1220230:CDS
ATATCGCAATATGCTTAACT+TGG 0.431744 8_1:-83283704 None:intergenic
TTCTACGCAAGGCAGCTTGT+AGG 0.432727 8_1:-83280469 None:intergenic
AAGTAATGTAACATGTGAAA+TGG 0.434746 8_1:+83284729 Msa1220230:three_prime_UTR
TTTCACATGTTACATTACTT+GGG 0.436982 8_1:-83284726 None:intergenic
TTGGGGTATTCCTACGACAT+TGG 0.437569 8_1:-83284708 None:intergenic
ATAGGGAACTCCACGTTTGA+TGG 0.437793 8_1:-83281040 None:intergenic
ATGCATTTGCAGAAATTGAC+TGG 0.442160 8_1:+83282910 Msa1220230:intron
ATTGGCGGAGAAGTTGATTC+CGG 0.442381 8_1:+83279821 Msa1220230:CDS
GGTATTGTGGTGTGGCGATC+GGG 0.444388 8_1:+83280417 Msa1220230:CDS
GTTGCAGAGACTGAGAAATA+TGG 0.447718 8_1:+83279851 Msa1220230:CDS
ACTTGGTTGATGTCCCCAAT+TGG 0.449038 8_1:-83283163 None:intergenic
GAAGGATTTAGCTAAAATAC+AGG 0.450289 8_1:+83283388 Msa1220230:CDS
TGCCAAGGAGATAAACGCTT+TGG 0.451646 8_1:-83279624 None:intergenic
TCTTACACGAAAGTATATAA+TGG 0.454878 8_1:+83280492 Msa1220230:CDS
CGAATTTGGTCAGAGAAACT+TGG 0.461613 8_1:-83279450 None:intergenic
TCTCGATTAAAAGATTCAAT+AGG 0.464473 8_1:-83280594 None:intergenic
TTCCCTATACATCTAATGAT+AGG 0.466667 8_1:+83281055 Msa1220230:CDS
AAGCTTGTTGTCACGAAGAC+AGG 0.466888 8_1:+83283842 Msa1220230:CDS
TGTTGCTGTTGTTCTTGCCA+TGG 0.469337 8_1:-83279516 None:intergenic
GTTGCTGTTGTTCTTGCCAT+GGG 0.469452 8_1:-83279515 None:intergenic
AATGATGAGAGAATCTACTT+TGG 0.470218 8_1:+83283203 Msa1220230:CDS
AATAATTATTATATGGCCCT+TGG 0.473196 8_1:-83283775 None:intergenic
GGTAATTGATCAGCATCAAC+AGG 0.474127 8_1:-83280735 None:intergenic
TGGAACCCTTGCTGAGACTA+GGG 0.474177 8_1:+83283131 Msa1220230:CDS
AGATCTTTGTTTAGGAAGAT+GGG 0.477491 8_1:+83283467 Msa1220230:CDS
CTGGAACCCTTGCTGAGACT+AGG 0.478799 8_1:+83283130 Msa1220230:CDS
CATTCAGACTTCTTCCGTAT+GGG 0.480915 8_1:+83280784 Msa1220230:CDS
TGGACAATTCAGTGGATGTT+GGG 0.481308 8_1:+83280529 Msa1220230:CDS
GATCGAACTCAACCTTCTGT+TGG 0.482859 8_1:+83280665 Msa1220230:CDS
CAACAATTCCAACCACAAAA+CGG 0.485217 8_1:+83279395 Msa1220230:CDS
CGAGGTCTTTCATGTCATCA+TGG 0.485625 8_1:-83284306 None:intergenic
AGACTCTGCAGAGTATTTGA+AGG 0.486990 8_1:+83280614 Msa1220230:CDS
AGACAAAGATAATGTGAAAC+GGG 0.489498 8_1:+83279704 Msa1220230:CDS
TGAAATAAGTGTGAAAGAAA+TGG 0.489780 8_1:+83280566 Msa1220230:CDS
TTGATCAGCATCAACAGGTA+AGG 0.490123 8_1:-83280730 None:intergenic
AGGTATTGTGGTGTGGCGAT+CGG 0.490697 8_1:+83280416 Msa1220230:CDS
AGTCTCTGCAACTCATGTTC+CGG 0.491693 8_1:-83279840 None:intergenic
AACCAAGTAAACAAGAAGTT+GGG 0.491842 8_1:+83283178 Msa1220230:CDS
GGGTGTTCCTCTTGGGATTG+TGG 0.496204 8_1:-83279579 None:intergenic
AAGACAAAGATAATGTGAAA+CGG 0.505781 8_1:+83279703 Msa1220230:CDS
GTTAATGTCTCCAAATCAGT+TGG 0.506886 8_1:-83283434 None:intergenic
GTGTTTGGGAAGCTAATTTG+AGG 0.509014 8_1:-83279485 None:intergenic
CCATTCAGACTTCTTCCGTA+TGG 0.509793 8_1:+83280783 Msa1220230:CDS
TGTTTGGGAAGCTAATTTGA+GGG 0.512273 8_1:-83279484 None:intergenic
CATATAATAATTATTTATCG+TGG 0.512686 8_1:+83283783 Msa1220230:CDS
TTATACCCTGGAACCACAGC+AGG 0.514036 8_1:-83280756 None:intergenic
GGTTGGAATTGTTGAAAATG+TGG 0.519985 8_1:-83279386 None:intergenic
TGCATTTGCAGAAATTGACT+GGG 0.522489 8_1:+83282911 Msa1220230:intron
CACGAAAGTATATAATGGTA+AGG 0.522498 8_1:+83280497 Msa1220230:CDS
TGCTGATCAATTACCTGCTG+TGG 0.523115 8_1:+83280743 Msa1220230:CDS
GGTAGGCGGGATGTTTATGC+TGG 0.532035 8_1:+83283606 Msa1220230:intron
ACGGCGCCACACTTTGCCCT+TGG 0.532852 8_1:+83280864 Msa1220230:CDS
GAGAAGTAATACTGAATTGG+CGG 0.534782 8_1:+83279806 Msa1220230:CDS
AAACAAGGTTTCACCCCATA+CGG 0.539368 8_1:-83280798 None:intergenic
CATGAGTGAAGAAGAATCGA+TGG 0.544193 8_1:+83280638 Msa1220230:CDS
AATTCAGTGGATGTTGGGAG+TGG 0.546760 8_1:+83280534 Msa1220230:CDS
GGAAGAAGTAGAGAACTTCA+AGG 0.547852 8_1:+83280964 Msa1220230:intron
ATGGTGGAGAGGTTCAGTGT+TGG 0.549002 8_1:+83279882 Msa1220230:CDS
AATTACCTGCTGTGGTTCCA+GGG 0.549523 8_1:+83280751 Msa1220230:CDS
TTCACATGTTACATTACTTG+GGG 0.553912 8_1:-83284725 None:intergenic
ACTCAAAATTAAGAGGTTGT+GGG 0.554963 8_1:-83279599 None:intergenic
CTTTGGAAGCTGAGAGTGGT+GGG 0.555129 8_1:+83283727 Msa1220230:CDS
GTGGACAATTCAGTGGATGT+TGG 0.556615 8_1:+83280528 Msa1220230:CDS
TTGCTGCCCTAGTCTCAGCA+AGG 0.558727 8_1:-83283137 None:intergenic
GGAATATATTGTAATTTACA+GGG 0.559154 8_1:+83282957 Msa1220230:CDS
GAGAAATATGGCGTTGAGGA+TGG 0.559402 8_1:+83279863 Msa1220230:CDS
GAGTAAAACTGGAGGTATTG+TGG 0.560101 8_1:+83280404 Msa1220230:intron
AAATATGGCGTTGAGGATGG+TGG 0.563812 8_1:+83279866 Msa1220230:CDS
GTTGTCACGAAGACAGGCAT+TGG 0.566651 8_1:+83283848 Msa1220230:CDS
ATATAATAATTATTTATCGT+GGG 0.568217 8_1:+83283784 Msa1220230:CDS
TCTTTGGAAGCTGAGAGTGG+TGG 0.568769 8_1:+83283726 Msa1220230:CDS
GTTCCATGCGACACATCAAA+AGG 0.568788 8_1:-83284651 None:intergenic
CTATACATCTAATGATAGGA+TGG 0.569547 8_1:+83281059 Msa1220230:CDS
TGGAGTTGCTGGTATTACTC+AGG 0.570067 8_1:+83279902 Msa1220230:CDS
CCGCGCTTCAAAGATTGGAC+AGG 0.571785 8_1:+83280699 Msa1220230:CDS
TAGAAAACATGCATCTACAC+TGG 0.573476 8_1:+83283634 Msa1220230:CDS
ACAAGACAAACCAGAACTAG+TGG 0.574074 8_1:+83279551 Msa1220230:CDS
ATTCAGACTTCTTCCGTATG+GGG 0.575842 8_1:+83280785 Msa1220230:CDS
AATCAGTTGGAAGGTCTGCT+GGG 0.575969 8_1:-83283421 None:intergenic
ACATTCCTCGATATAACACT+AGG 0.578174 8_1:-83280446 None:intergenic
TATCGCAATATGCTTAACTT+GGG 0.578620 8_1:-83283703 None:intergenic
TTCGTGTAAGATTCTACGCA+AGG 0.581312 8_1:-83280480 None:intergenic
TGATCAGCATCAACAGGTAA+GGG 0.585666 8_1:-83280729 None:intergenic
TGGTATTACTCAGGAATTGG+TGG 0.587892 8_1:+83279911 Msa1220230:CDS
ATGTCTCCAAATCAGTTGGA+AGG 0.588053 8_1:-83283430 None:intergenic
GAGGTCTTTCATGTCATCAT+GGG 0.588523 8_1:-83284305 None:intergenic
ATCTGTAGACAAGGATACCA+AGG 0.589472 8_1:+83283758 Msa1220230:CDS
TGGGTCTCATAACCTGTGGA+CGG 0.596006 8_1:-83283818 None:intergenic
GCGTTTATCTCCTTGGCACG+TGG 0.599426 8_1:+83279629 Msa1220230:CDS
CTAGAGCTATAGTAAAGCTG+TGG 0.601734 8_1:+83280992 Msa1220230:CDS
TAGAGCTATAGTAAAGCTGT+GGG 0.602614 8_1:+83280993 Msa1220230:CDS
ATTCAGTGGATGTTGGGAGT+GGG 0.602998 8_1:+83280535 Msa1220230:CDS
ATTTCCTTGTTGGATAAACA+AGG 0.603660 8_1:-83280813 None:intergenic
AAGGTTCAGGAAGTCTGAGA+AGG 0.605613 8_1:+83283370 Msa1220230:CDS
CCATACGGAAGAAGTCTGAA+TGG 0.606838 8_1:-83280783 None:intergenic
TAGGATGGCCGAAGAACTCA+AGG 0.607091 8_1:+83281074 Msa1220230:CDS
GAATATATTGTAATTTACAG+GGG 0.614122 8_1:+83282958 Msa1220230:CDS
GCAAGGGTTCCAGCAAGTAA+CGG 0.614542 8_1:-83283120 None:intergenic
TGGTTGATGTCCCCAATTGG+CGG 0.616228 8_1:-83283160 None:intergenic
TGTCATCATGGGAAGAAACA+TGG 0.616340 8_1:-83284294 None:intergenic
ACACTGGAAATATCGCGAGT+TGG 0.619243 8_1:+83283650 Msa1220230:CDS
ATGCGACACATCAAAAGGCA+TGG 0.620367 8_1:-83284646 None:intergenic
AGGGCAGCAACCGCCAATTG+GGG 0.622870 8_1:+83283150 Msa1220230:CDS
GACTGAGAAATATGGCGTTG+AGG 0.626272 8_1:+83279859 Msa1220230:CDS
GACCCAACTCATCCAACAGA+AGG 0.627115 8_1:-83280677 None:intergenic
ATAAGTGTGAAAGAAATGGT+TGG 0.627154 8_1:+83280570 Msa1220230:CDS
AAGAGCTCATCAAATTCTCG+AGG 0.628328 8_1:+83280010 Msa1220230:CDS
TGCTGCCCTAGTCTCAGCAA+GGG 0.628919 8_1:-83283136 None:intergenic
AGGAAATGACTGACATGCGT+AGG 0.633226 8_1:+83280829 Msa1220230:CDS
AGATTTCTATCCAATGTCGT+AGG 0.634292 8_1:+83284698 Msa1220230:three_prime_UTR
GTTTCTGAAGCAGAGAAACA+CGG 0.634932 8_1:+83279156 Msa1220230:intron
AACTGTTCTCCAACAAGACG+AGG 0.635550 8_1:+83283035 Msa1220230:CDS
CATTCCTCGATATAACACTA+GGG 0.644587 8_1:-83280445 None:intergenic
GCGTAGGATTGCTAGAAGAA+CGG 0.645784 8_1:+83280845 Msa1220230:CDS
TGAAGGTTCAAAGAATTATG+CGG 0.648871 8_1:+83279049 Msa1220230:five_prime_UTR
GAAGAACTACTTCCGTCCAC+AGG 0.649230 8_1:+83283806 Msa1220230:CDS
TAATGGTAAGGAGAATGCTG+TGG 0.650593 8_1:+83280509 Msa1220230:CDS
TGCATACCAAGGGCAAAGTG+TGG 0.656479 8_1:-83280870 None:intergenic
GAATGCTGTGGACAATTCAG+TGG 0.657859 8_1:+83280521 Msa1220230:CDS
TGGCGTTGAGGATGGTGGAG+AGG 0.659099 8_1:+83279871 Msa1220230:CDS
TTTGGAAGCTGAGAGTGGTG+GGG 0.660912 8_1:+83283728 Msa1220230:CDS
CGGGTACAGCGAAATTCTGG+TGG 0.662432 8_1:+83279723 Msa1220230:CDS
GAAACCTTGTTTATCCAACA+AGG 0.665865 8_1:+83280809 Msa1220230:CDS
GGTGCTAGTATCTGTAGACA+AGG 0.666036 8_1:+83283749 Msa1220230:CDS
GCATTTGCAGAAATTGACTG+GGG 0.670583 8_1:+83282912 Msa1220230:intron
CTTAATCAGAGTAAAACTGG+AGG 0.676737 8_1:+83280396 Msa1220230:intron
TCTGTAGACAAGGATACCAA+GGG 0.682121 8_1:+83283759 Msa1220230:CDS
TATTGAGCTTCAAAGACGAG+AGG 0.684121 8_1:+83283878 Msa1220230:CDS
CCTGTCCAATCTTTGAAGCG+CGG 0.686187 8_1:-83280699 None:intergenic
AGTTCCCTAGTGTTATATCG+AGG 0.691104 8_1:+83280441 Msa1220230:CDS
CATTTGCAGAAATTGACTGG+GGG 0.692019 8_1:+83282913 Msa1220230:intron
ATATCTTTGGAAGCTGAGAG+TGG 0.692298 8_1:+83283723 Msa1220230:CDS
AAGGATTTAGCTAAAATACA+GGG 0.697797 8_1:+83283389 Msa1220230:CDS
CTGAAGCAGAGAAACACGGA+AGG 0.703195 8_1:+83279160 Msa1220230:five_prime_UTR
AAACTGGAGGTATTGTGGTG+TGG 0.705901 8_1:+83280409 Msa1220230:CDS
GGAACAACCACAATCCCAAG+AGG 0.708063 8_1:+83279572 Msa1220230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATCAAACAAAATTTTTTAT+GGG - chr8_1:83282676-83282695 None:intergenic 10.0%
!!! TAATCAAACAAAATTTTTTA+TGG - chr8_1:83282677-83282696 None:intergenic 10.0%
!! ATCTAACTTTATAAATTATA+TGG + chr8_1:83283333-83283352 Msa1220230:intron 10.0%
!! TTTATAAATTATATGGTTAT+AGG + chr8_1:83283340-83283359 Msa1220230:intron 10.0%
!! ATATAATAATTATTTATCGT+GGG + chr8_1:83283784-83283803 Msa1220230:CDS 10.0%
!!! ACTGTTTAATTTAATTGTAT+TGG + chr8_1:83281132-83281151 Msa1220230:intron 15.0%
!! AATAGATAATATACTATTAC+AGG + chr8_1:83281614-83281633 Msa1220230:intron 15.0%
!!! TTATTAAATTTTTATGTCAG+TGG - chr8_1:83281882-83281901 None:intergenic 15.0%
!!! TAACTTTTTTTAATGAGTTT+TGG + chr8_1:83282648-83282667 Msa1220230:intron 15.0%
!!! AACTTTTTTTAATGAGTTTT+GGG + chr8_1:83282649-83282668 Msa1220230:intron 15.0%
!! TTTATAAAGTTAGATAGATA+TGG - chr8_1:83283328-83283347 None:intergenic 15.0%
!! CACGATAAATAATTATTATA+TGG - chr8_1:83283785-83283804 None:intergenic 15.0%
!! CATATAATAATTATTTATCG+TGG + chr8_1:83283783-83283802 Msa1220230:CDS 15.0%
!!! TAAAGCAATAATTTCTTTTT+TGG + chr8_1:83283904-83283923 Msa1220230:intron 15.0%
!!! CTTTCTAATTTTTTTTTTTC+AGG + chr8_1:83284058-83284077 Msa1220230:intron 15.0%
!! ATATTGCTACTAAATATTAT+TGG - chr8_1:83284398-83284417 None:intergenic 15.0%
!! TTACTTATCTATATTCATCA+AGG + chr8_1:83280065-83280084 Msa1220230:intron 20.0%
!!! GTAAAGAATAGTAAATCTTT+TGG - chr8_1:83280937-83280956 None:intergenic 20.0%
!!! GATAGTTTTCAAATGATTTT+GGG - chr8_1:83281682-83281701 None:intergenic 20.0%
!!! CAGTTATGTTGTTTAATTTT+AGG - chr8_1:83281741-83281760 None:intergenic 20.0%
!! AATGTGTTATACTTATGTTA+TGG - chr8_1:83281797-83281816 None:intergenic 20.0%
!! ATAAAAAGAGATAGAATCAT+GGG + chr8_1:83282095-83282114 Msa1220230:intron 20.0%
!! TCTTATGTATGATATAATGT+TGG - chr8_1:83282126-83282145 None:intergenic 20.0%
!! GATAATGTTACAAAAGAAAA+CGG - chr8_1:83282367-83282386 None:intergenic 20.0%
!!! TTTTCTTTTGTAACATTATC+AGG + chr8_1:83282367-83282386 Msa1220230:intron 20.0%
!!! TTTCTTTTGTAACATTATCA+GGG + chr8_1:83282368-83282387 Msa1220230:intron 20.0%
!!! AGTTTTTTGCAATTTAGAAA+GGG - chr8_1:83282410-83282429 None:intergenic 20.0%
!! AAAAAAGTTAGAACAATATG+AGG - chr8_1:83282638-83282657 None:intergenic 20.0%
!! AGGAATATATTGTAATTTAC+AGG + chr8_1:83282956-83282975 Msa1220230:CDS 20.0%
!! GGAATATATTGTAATTTACA+GGG + chr8_1:83282957-83282976 Msa1220230:CDS 20.0%
!! GAATATATTGTAATTTACAG+GGG + chr8_1:83282958-83282977 Msa1220230:CDS 20.0%
!!! AATAATTTCTTTTTTGGTAG+TGG + chr8_1:83283910-83283929 Msa1220230:intron 20.0%
!! ATTGAGAAGATAAACAATAA+TGG + chr8_1:83284596-83284615 Msa1220230:three_prime_UTR 20.0%
!! TTGAGAAGATAAACAATAAT+GGG + chr8_1:83284597-83284616 Msa1220230:three_prime_UTR 20.0%
! ATTTATGCTTTGTAGGATAA+AGG + chr8_1:83279077-83279096 Msa1220230:intron 25.0%
!!! GTTCATGATTTTGATTTTAG+TGG + chr8_1:83279187-83279206 Msa1220230:five_prime_UTR 25.0%
!!! AGATAGTAGTGTTTTTTCAA+TGG + chr8_1:83279213-83279232 Msa1220230:five_prime_UTR 25.0%
!!! GATAGTAGTGTTTTTTCAAT+GGG + chr8_1:83279214-83279233 Msa1220230:five_prime_UTR 25.0%
! ATTGTTGAAAATGTGGTTTA+GGG - chr8_1:83279382-83279401 None:intergenic 25.0%
! AATTGTTGAAAATGTGGTTT+AGG - chr8_1:83279383-83279402 None:intergenic 25.0%
! TTTGGAAACTCAAAATTAAG+AGG - chr8_1:83279609-83279628 None:intergenic 25.0%
! AAGACAAAGATAATGTGAAA+CGG + chr8_1:83279703-83279722 Msa1220230:CDS 25.0%
! GTATTAGTAGTTTGAAGAAA+AGG + chr8_1:83279784-83279803 Msa1220230:CDS 25.0%
! GTAAACTGATAAATATGAGA+GGG - chr8_1:83280049-83280068 None:intergenic 25.0%
! AGTAAACTGATAAATATGAG+AGG - chr8_1:83280050-83280069 None:intergenic 25.0%
! TTAAGCATCTATATCATAAG+TGG - chr8_1:83280249-83280268 None:intergenic 25.0%
!!! ATTAAGTTGATTGTCCAAAA+TGG + chr8_1:83280268-83280287 Msa1220230:intron 25.0%
!!! TTAAGTTGATTGTCCAAAAT+GGG + chr8_1:83280269-83280288 Msa1220230:intron 25.0%
! GTTCAAATATTCTCTGATAA+AGG - chr8_1:83280340-83280359 None:intergenic 25.0%
!! TCTTACACGAAAGTATATAA+TGG + chr8_1:83280492-83280511 Msa1220230:CDS 25.0%
! TGAAATAAGTGTGAAAGAAA+TGG + chr8_1:83280566-83280585 Msa1220230:CDS 25.0%
! TCTCGATTAAAAGATTCAAT+AGG - chr8_1:83280597-83280616 None:intergenic 25.0%
! ATCCTATCATTAGATGTATA+GGG - chr8_1:83281060-83281079 None:intergenic 25.0%
!! TAATATTGTCCAATTTCTAG+CGG - chr8_1:83281113-83281132 None:intergenic 25.0%
!! GGAATTTTATCATGCTTAAA+AGG + chr8_1:83281153-83281172 Msa1220230:intron 25.0%
! TTCTTGTAAATGAGAATATC+AGG + chr8_1:83281253-83281272 Msa1220230:intron 25.0%
! TCTTGTAAATGAGAATATCA+GGG + chr8_1:83281254-83281273 Msa1220230:intron 25.0%
! GCATTAGACAAAAGTTTAAT+GGG - chr8_1:83281299-83281318 None:intergenic 25.0%
! TGCATTAGACAAAAGTTTAA+TGG - chr8_1:83281300-83281319 None:intergenic 25.0%
!! TTTTCATCTGAAAATAGCAA+AGG + chr8_1:83281412-83281431 Msa1220230:intron 25.0%
! ACATTTATCAGAAAATGAAG+TGG - chr8_1:83281446-83281465 None:intergenic 25.0%
! TCTACAGTTAAATCGTATTT+CGG - chr8_1:83281506-83281525 None:intergenic 25.0%
!!! GTAGAAACTGTCTTTTTTTA+TGG + chr8_1:83281521-83281540 Msa1220230:intron 25.0%
!! TTTTTCTGTTGTAACAAACA+TGG - chr8_1:83281551-83281570 None:intergenic 25.0%
!! GGATAGTTTTCAAATGATTT+TGG - chr8_1:83281683-83281702 None:intergenic 25.0%
! TAATAAAAAATTCCAAGCAC+AGG + chr8_1:83281896-83281915 Msa1220230:intron 25.0%
!! ATAAGCATGATATATTTTCC+TGG + chr8_1:83281942-83281961 Msa1220230:intron 25.0%
!! TAAGCATGATATATTTTCCT+GGG + chr8_1:83281943-83281962 Msa1220230:intron 25.0%
! TTCTATGTGTAGAAAGAAAT+AGG + chr8_1:83281979-83281998 Msa1220230:intron 25.0%
! TCTATGTGTAGAAAGAAATA+GGG + chr8_1:83281980-83281999 Msa1220230:intron 25.0%
! ATGCTATTATGTTTATTCCT+TGG + chr8_1:83282006-83282025 Msa1220230:intron 25.0%
! GATAAAAAGAGATAGAATCA+TGG + chr8_1:83282094-83282113 Msa1220230:intron 25.0%
!!! GTTTTTTGCAATTTAGAAAG+GGG - chr8_1:83282409-83282428 None:intergenic 25.0%
!!! GAGTTTTTTGCAATTTAGAA+AGG - chr8_1:83282411-83282430 None:intergenic 25.0%
! TCTAAATTGCAAAAAACTCT+TGG + chr8_1:83282412-83282431 Msa1220230:intron 25.0%
!!! TCTTACAAGACTTTGAAATA+TGG - chr8_1:83282765-83282784 None:intergenic 25.0%
! TGTTCCTTTCTTTAAACTTA+TGG + chr8_1:83282875-83282894 Msa1220230:intron 25.0%
! AACACCATAAGTTTAAAGAA+AGG - chr8_1:83282882-83282901 None:intergenic 25.0%
!! AACCTTACTTTCTAGAAATA+AGG + chr8_1:83282936-83282955 Msa1220230:CDS 25.0%
!!! TTCCTTATTTCTAGAAAGTA+AGG - chr8_1:83282941-83282960 None:intergenic 25.0%
! AAGGATTTAGCTAAAATACA+GGG + chr8_1:83283389-83283408 Msa1220230:CDS 25.0%
! TTGGTAAAAATACTTGTGAA+AGG + chr8_1:83283669-83283688 Msa1220230:CDS 25.0%
! TGGTAAAAATACTTGTGAAA+GGG + chr8_1:83283670-83283689 Msa1220230:CDS 25.0%
! AATAATTATTATATGGCCCT+TGG - chr8_1:83283778-83283797 None:intergenic 25.0%
!! TTACTCTGCTGTAATAATTT+TGG + chr8_1:83284164-83284183 Msa1220230:intron 25.0%
!!! AGTTTTTTGTTGTTGATTTC+AGG + chr8_1:83284209-83284228 Msa1220230:intron 25.0%
!!! TTTTTTCATAGACAAATACC+AGG + chr8_1:83284335-83284354 Msa1220230:three_prime_UTR 25.0%
! GCTACTAAATATTATTGGTA+AGG - chr8_1:83284393-83284412 None:intergenic 25.0%
!! TTTTTCCAAAGAGAATAATG+GGG - chr8_1:83284480-83284499 None:intergenic 25.0%
!! GTTTTTCCAAAGAGAATAAT+GGG - chr8_1:83284481-83284500 None:intergenic 25.0%
!! AGTTTTTCCAAAGAGAATAA+TGG - chr8_1:83284482-83284501 None:intergenic 25.0%
!!! GAGATTCATTTTGATAAAGA+CGG + chr8_1:83284515-83284534 Msa1220230:three_prime_UTR 25.0%
! TTTCACATGTTACATTACTT+GGG - chr8_1:83284729-83284748 None:intergenic 25.0%
! ATTTCACATGTTACATTACT+TGG - chr8_1:83284730-83284749 None:intergenic 25.0%
! AAGTAATGTAACATGTGAAA+TGG + chr8_1:83284729-83284748 Msa1220230:three_prime_UTR 25.0%
TGAAGGTTCAAAGAATTATG+CGG + chr8_1:83279049-83279068 Msa1220230:five_prime_UTR 30.0%
GGTAATCATTTATGCTTTGT+AGG + chr8_1:83279070-83279089 Msa1220230:intron 30.0%
AAATCAAAAATGGTTGCAAG+AGG - chr8_1:83279300-83279319 None:intergenic 30.0%
!!! TGCAACCATTTTTGATTTCA+TGG + chr8_1:83279302-83279321 Msa1220230:exon 30.0%
ACTCAAAATTAAGAGGTTGT+GGG - chr8_1:83279602-83279621 None:intergenic 30.0%
AACTCAAAATTAAGAGGTTG+TGG - chr8_1:83279603-83279622 None:intergenic 30.0%
! CAGATTCTGAATCATTTTGT+GGG - chr8_1:83279674-83279693 None:intergenic 30.0%
! TCAGATTCTGAATCATTTTG+TGG - chr8_1:83279675-83279694 None:intergenic 30.0%
AGACAAAGATAATGTGAAAC+GGG + chr8_1:83279704-83279723 Msa1220230:CDS 30.0%
AAGGAGAAGTAATACTGAAT+TGG + chr8_1:83279803-83279822 Msa1220230:CDS 30.0%
TGGATGCTATTCATGAAAAA+TGG + chr8_1:83279931-83279950 Msa1220230:CDS 30.0%
TGCTATTCATGAAAAATGGA+TGG + chr8_1:83279935-83279954 Msa1220230:CDS 30.0%
! CTTTTCATATTAGCAGAAAG+AGG - chr8_1:83279993-83280012 None:intergenic 30.0%
AATATTCTCTGATAAAGGAC+AGG - chr8_1:83280335-83280354 None:intergenic 30.0%
TTGCTTAATCAGAGTAAAAC+TGG + chr8_1:83280393-83280412 Msa1220230:intron 30.0%
! CACGAAAGTATATAATGGTA+AGG + chr8_1:83280497-83280516 Msa1220230:CDS 30.0%
ATAAGTGTGAAAGAAATGGT+TGG + chr8_1:83280570-83280589 Msa1220230:CDS 30.0%
ATTTCCTTGTTGGATAAACA+AGG - chr8_1:83280816-83280835 None:intergenic 30.0%
TTCCCTATACATCTAATGAT+AGG + chr8_1:83281055-83281074 Msa1220230:CDS 30.0%
CATCCTATCATTAGATGTAT+AGG - chr8_1:83281061-83281080 None:intergenic 30.0%
CTATACATCTAATGATAGGA+TGG + chr8_1:83281059-83281078 Msa1220230:CDS 30.0%
CAATTGAAACATGAGCATAT+AGG + chr8_1:83281321-83281340 Msa1220230:intron 30.0%
GTTTCTAACACAATGAGAAA+AGG - chr8_1:83281478-83281497 None:intergenic 30.0%
TTTCTCATTGTGTTAGAAAC+CGG + chr8_1:83281478-83281497 Msa1220230:intron 30.0%
!! GTTTTCAAATGATTTTGGGA+GGG - chr8_1:83281678-83281697 None:intergenic 30.0%
! AGTTTTCAAATGATTTTGGG+AGG - chr8_1:83281679-83281698 None:intergenic 30.0%
GGAATAAATAGAGCAATGAA+AGG - chr8_1:83281720-83281739 None:intergenic 30.0%
AGAATATCGTTTATTTACCC+AGG - chr8_1:83281963-83281982 None:intergenic 30.0%
GTAATTGTGATCCAAAACAA+AGG - chr8_1:83282334-83282353 None:intergenic 30.0%
! TAATGCGATTTTCTACATGT+GGG - chr8_1:83282500-83282519 None:intergenic 30.0%
! ATAATGCGATTTTCTACATG+TGG - chr8_1:83282501-83282520 None:intergenic 30.0%
CATGTAGAAAATCGCATTAT+AGG + chr8_1:83282501-83282520 Msa1220230:intron 30.0%
TTATAGGTGGTCAATATTCA+CGG + chr8_1:83282517-83282536 Msa1220230:intron 30.0%
! TCACGGTTTGATAATATTCA+TGG + chr8_1:83282534-83282553 Msa1220230:intron 30.0%
! CACGGTTTGATAATATTCAT+GGG + chr8_1:83282535-83282554 Msa1220230:intron 30.0%
! TTTGTAGTATTCGTGCATTT+TGG + chr8_1:83282729-83282748 Msa1220230:intron 30.0%
!! TACAAGACTTTGAAATATGG+TGG - chr8_1:83282762-83282781 None:intergenic 30.0%
! TATTCACTTCAATTTTGCCA+CGG - chr8_1:83282852-83282871 None:intergenic 30.0%
AACCAAGTAAACAAGAAGTT+GGG + chr8_1:83283178-83283197 Msa1220230:CDS 30.0%
AATGATGAGAGAATCTACTT+TGG + chr8_1:83283203-83283222 Msa1220230:CDS 30.0%
TATGGTTATAGGCAAAAACA+AGG + chr8_1:83283351-83283370 Msa1220230:intron 30.0%
GAAGGATTTAGCTAAAATAC+AGG + chr8_1:83283388-83283407 Msa1220230:CDS 30.0%
! ATGAAGAGAGATCTTTGTTT+AGG + chr8_1:83283459-83283478 Msa1220230:CDS 30.0%
! AGATCTTTGTTTAGGAAGAT+GGG + chr8_1:83283467-83283486 Msa1220230:CDS 30.0%
TTCTTACCTAGAAGTAAGTA+TGG - chr8_1:83283506-83283525 None:intergenic 30.0%
! ATGTTAAGCATGAGATTTTC+AGG + chr8_1:83283585-83283604 Msa1220230:intron 30.0%
TATCGCAATATGCTTAACTT+GGG - chr8_1:83283706-83283725 None:intergenic 30.0%
ATATCGCAATATGCTTAACT+TGG - chr8_1:83283707-83283726 None:intergenic 30.0%
TAAGCATATTGCGATATCTT+TGG + chr8_1:83283710-83283729 Msa1220230:CDS 30.0%
!!! ATTTCTTTTTTGGTAGTGGT+CGG + chr8_1:83283914-83283933 Msa1220230:intron 30.0%
GACAATGCATAAAATATGCA+AGG - chr8_1:83283955-83283974 None:intergenic 30.0%
ACACCATATATCAGATTTAC+AGG + chr8_1:83284088-83284107 Msa1220230:CDS 30.0%
TCTCCTGTAAATCTGATATA+TGG - chr8_1:83284094-83284113 None:intergenic 30.0%
!!! CTGCTGTAATAATTTTGGTT+AGG + chr8_1:83284169-83284188 Msa1220230:intron 30.0%
!!! TTTTTGTTGTTGATTTCAGG+AGG + chr8_1:83284212-83284231 Msa1220230:intron 30.0%
AGGAGGATATGAAAAATCAA+AGG + chr8_1:83284229-83284248 Msa1220230:intron 30.0%
GGAGGATATGAAAAATCAAA+GGG + chr8_1:83284230-83284249 Msa1220230:intron 30.0%
AAAAATCAAAGGGTGATTGA+TGG + chr8_1:83284240-83284259 Msa1220230:CDS 30.0%
!! TCTATGAAAAAAGAGTATCG+AGG - chr8_1:83284327-83284346 None:intergenic 30.0%
GGAAAAAAATAAGAGGAACA+AGG - chr8_1:83284458-83284477 None:intergenic 30.0%
TAATGGGGGAAAAAAATAAG+AGG - chr8_1:83284465-83284484 None:intergenic 30.0%
! TTTTCCAAAGAGAATAATGG+GGG - chr8_1:83284479-83284498 None:intergenic 30.0%
! CTTTGGAAAAACTAGAATGA+AGG + chr8_1:83284489-83284508 Msa1220230:intron 30.0%
!! ATTCATTTTGATAAAGACGG+CGG + chr8_1:83284518-83284537 Msa1220230:three_prime_UTR 30.0%
TTCACATGTTACATTACTTG+GGG - chr8_1:83284728-83284747 None:intergenic 30.0%
TTTCGGTATAAGAATGATGA+AGG + chr8_1:83284773-83284792 Msa1220230:three_prime_UTR 30.0%
!!! AGTAGTGTTTTTTCAATGGG+AGG + chr8_1:83279217-83279236 Msa1220230:five_prime_UTR 35.0%
!!! GGCTTTTTTTGGTTTGATGA+TGG - chr8_1:83279279-83279298 None:intergenic 35.0%
TAGCGCCATGAAATCAAAAA+TGG - chr8_1:83279310-83279329 None:intergenic 35.0%
!! GAAAATGTGGTTTAGGGTTT+TGG - chr8_1:83279376-83279395 None:intergenic 35.0%
GGTTGGAATTGTTGAAAATG+TGG - chr8_1:83279389-83279408 None:intergenic 35.0%
CAACAATTCCAACCACAAAA+CGG + chr8_1:83279395-83279414 Msa1220230:CDS 35.0%
CTGACCAAATTCGACATAAA+TGG + chr8_1:83279460-83279479 Msa1220230:CDS 35.0%
TGTTTGGGAAGCTAATTTGA+GGG - chr8_1:83279487-83279506 None:intergenic 35.0%
! CCATGGGAATTTTTGTGTTT+GGG - chr8_1:83279502-83279521 None:intergenic 35.0%
!!! CATTTTGTGGGTGTTGTTTA+GGG - chr8_1:83279662-83279681 None:intergenic 35.0%
!!! TCATTTTGTGGGTGTTGTTT+AGG - chr8_1:83279663-83279682 None:intergenic 35.0%
! AAATTCTGGTGGTTCTGTTA+TGG + chr8_1:83279734-83279753 Msa1220230:CDS 35.0%
GAGAAGTAATACTGAATTGG+CGG + chr8_1:83279806-83279825 Msa1220230:CDS 35.0%
CTTAATCAGAGTAAAACTGG+AGG + chr8_1:83280396-83280415 Msa1220230:intron 35.0%
CATTCCTCGATATAACACTA+GGG - chr8_1:83280448-83280467 None:intergenic 35.0%
ACATTCCTCGATATAACACT+AGG - chr8_1:83280449-83280468 None:intergenic 35.0%
! GAAACCTTGTTTATCCAACA+AGG + chr8_1:83280809-83280828 Msa1220230:CDS 35.0%
TTACTATTCTTTACTGCTGC+AGG + chr8_1:83280943-83280962 Msa1220230:intron 35.0%
TAGAGCTATAGTAAAGCTGT+GGG + chr8_1:83280993-83281012 Msa1220230:CDS 35.0%
GAGAAATACCTTGAGTTCTT+CGG - chr8_1:83281085-83281104 None:intergenic 35.0%
TCTCATAAACCGCTAGAAAT+TGG + chr8_1:83281101-83281120 Msa1220230:intron 35.0%
TATAAAACAACCCATCTGCT+TGG + chr8_1:83281178-83281197 Msa1220230:intron 35.0%
AGAATATCAGGGATGAGATT+AGG + chr8_1:83281265-83281284 Msa1220230:intron 35.0%
AACATGAGCATATAGGTAGA+TGG + chr8_1:83281328-83281347 Msa1220230:intron 35.0%
GTAAAGTGTATCTGACTATC+TGG + chr8_1:83281380-83281399 Msa1220230:intron 35.0%
GTTAAATCGTATTTCGGTAC+CGG - chr8_1:83281500-83281519 None:intergenic 35.0%
CAGAATTCACACACAAACTA+AGG + chr8_1:83281590-83281609 Msa1220230:intron 35.0%
TGAAAGGAGAAAGTGACTAT+AGG - chr8_1:83281704-83281723 None:intergenic 35.0%
! AAGCGAGTTTAAAGCTTTCA+GGG + chr8_1:83281835-83281854 Msa1220230:intron 35.0%
TTCAGGGAATTGCCATAATT+AGG + chr8_1:83281851-83281870 Msa1220230:intron 35.0%
AATCAGATGACCTAAGTCAA+TGG + chr8_1:83282261-83282280 Msa1220230:intron 35.0%
ATGACCTAAGTCAATGGAAT+AGG + chr8_1:83282267-83282286 Msa1220230:intron 35.0%
!! AGTACCTATTCCATTGACTT+AGG - chr8_1:83282274-83282293 None:intergenic 35.0%
TGATTTCACACCAATAAGCA+CGG - chr8_1:83282476-83282495 None:intergenic 35.0%
GTAGAAAATCGCATTATAGG+TGG + chr8_1:83282504-83282523 Msa1220230:intron 35.0%
!! AAGTGATTTGCTGCAATTGA+AGG + chr8_1:83282583-83282602 Msa1220230:intron 35.0%
! ATAGCTGCAGTCAATCTTTT+GGG - chr8_1:83282706-83282725 None:intergenic 35.0%
! TATAGCTGCAGTCAATCTTT+TGG - chr8_1:83282707-83282726 None:intergenic 35.0%
CACTTGACACTTAAATGCTT+TGG + chr8_1:83282801-83282820 Msa1220230:intron 35.0%
CTTGTTCATAATTTATCCCG+TGG + chr8_1:83282832-83282851 Msa1220230:intron 35.0%
! ATTCACTTCAATTTTGCCAC+GGG - chr8_1:83282851-83282870 None:intergenic 35.0%
ATGCATTTGCAGAAATTGAC+TGG + chr8_1:83282910-83282929 Msa1220230:intron 35.0%
TGCATTTGCAGAAATTGACT+GGG + chr8_1:83282911-83282930 Msa1220230:intron 35.0%
! TAGTTTTTGTCTCTCAGTCA+GGG - chr8_1:83283016-83283035 None:intergenic 35.0%
!! TTAGTTTTTGTCTCTCAGTC+AGG - chr8_1:83283017-83283036 None:intergenic 35.0%
CAACCAAGTAAACAAGAAGT+TGG + chr8_1:83283177-83283196 Msa1220230:CDS 35.0%
! TTCCCAACTTCTTGTTTACT+TGG - chr8_1:83283183-83283202 None:intergenic 35.0%
! CTTTGGGAAGTTATTTCAGT+TGG - chr8_1:83283291-83283310 None:intergenic 35.0%
GGTAACAACAGATAGTCTTT+GGG - chr8_1:83283307-83283326 None:intergenic 35.0%
TGGTAACAACAGATAGTCTT+TGG - chr8_1:83283308-83283327 None:intergenic 35.0%
TATAGGCAAAAACAAGGTTC+AGG + chr8_1:83283357-83283376 Msa1220230:intron 35.0%
GTTAATGTCTCCAAATCAGT+TGG - chr8_1:83283437-83283456 None:intergenic 35.0%
! GAGATCTTTGTTTAGGAAGA+TGG + chr8_1:83283466-83283485 Msa1220230:CDS 35.0%
ATGAAGCCATACTTACTTCT+AGG + chr8_1:83283497-83283516 Msa1220230:CDS 35.0%
!!! TAAGCATGAGATTTTCAGGT+AGG + chr8_1:83283589-83283608 Msa1220230:intron 35.0%
! GTGTAGATGCATGTTTTCTA+TGG - chr8_1:83283634-83283653 None:intergenic 35.0%
TAGAAAACATGCATCTACAC+TGG + chr8_1:83283634-83283653 Msa1220230:CDS 35.0%
!!! TTTCTTTTTTGGTAGTGGTC+GGG + chr8_1:83283915-83283934 Msa1220230:intron 35.0%
CATAAAATATGCAAGGTCCA+GGG - chr8_1:83283948-83283967 None:intergenic 35.0%
! ATTCAGTGTTGAGTAGAGTT+TGG - chr8_1:83284269-83284288 None:intergenic 35.0%
TGTAATAAATTGCAAGCACC+TGG - chr8_1:83284356-83284375 None:intergenic 35.0%
! TTTTCCCCCATTATTCTCTT+TGG + chr8_1:83284472-83284491 Msa1220230:intron 35.0%
AGATTTCTATCCAATGTCGT+AGG + chr8_1:83284698-83284717 Msa1220230:three_prime_UTR 35.0%
!! GTTTCTGAAGCAGAGAAACA+CGG + chr8_1:83279156-83279175 Msa1220230:intron 40.0%
!!! TGGTTGCAAGAGGCTTTTTT+TGG - chr8_1:83279290-83279309 None:intergenic 40.0%
GGGAAAAACTGAAAATGCAG+AGG - chr8_1:83279345-83279364 None:intergenic 40.0%
!!! TGGTTTAGGGTTTTGGTTTG+GGG - chr8_1:83279369-83279388 None:intergenic 40.0%
!!! GTGGTTTAGGGTTTTGGTTT+GGG - chr8_1:83279370-83279389 None:intergenic 40.0%
!!! TGTGGTTTAGGGTTTTGGTT+TGG - chr8_1:83279371-83279390 None:intergenic 40.0%
!! TTTCAACTTGAGCCGTTTTG+TGG - chr8_1:83279410-83279429 None:intergenic 40.0%
CGAATTTGGTCAGAGAAACT+TGG - chr8_1:83279453-83279472 None:intergenic 40.0%
GGGACCATTTATGTCGAATT+TGG - chr8_1:83279467-83279486 None:intergenic 40.0%
GTGTTTGGGAAGCTAATTTG+AGG - chr8_1:83279488-83279507 None:intergenic 40.0%
CCCAAACACAAAAATTCCCA+TGG + chr8_1:83279499-83279518 Msa1220230:CDS 40.0%
! GCCATGGGAATTTTTGTGTT+TGG - chr8_1:83279503-83279522 None:intergenic 40.0%
ACAAGACAAACCAGAACTAG+TGG + chr8_1:83279551-83279570 Msa1220230:CDS 40.0%
! TTCCAAAGCGTTTATCTCCT+TGG + chr8_1:83279622-83279641 Msa1220230:CDS 40.0%
GTTGCAGAGACTGAGAAATA+TGG + chr8_1:83279851-83279870 Msa1220230:CDS 40.0%
TGCTGGTATTACTCAGGAAT+TGG + chr8_1:83279908-83279927 Msa1220230:CDS 40.0%
TGGTATTACTCAGGAATTGG+TGG + chr8_1:83279911-83279930 Msa1220230:CDS 40.0%
AAGAGCTCATCAAATTCTCG+AGG + chr8_1:83280010-83280029 Msa1220230:CDS 40.0%
! TTGTGAGGTATGACCCATTT+TGG - chr8_1:83280285-83280304 None:intergenic 40.0%
!! GAGTAAAACTGGAGGTATTG+TGG + chr8_1:83280404-83280423 Msa1220230:intron 40.0%
AGTTCCCTAGTGTTATATCG+AGG + chr8_1:83280441-83280460 Msa1220230:CDS 40.0%
TTCGTGTAAGATTCTACGCA+AGG - chr8_1:83280483-83280502 None:intergenic 40.0%
TAATGGTAAGGAGAATGCTG+TGG + chr8_1:83280509-83280528 Msa1220230:CDS 40.0%
TGGACAATTCAGTGGATGTT+GGG + chr8_1:83280529-83280548 Msa1220230:CDS 40.0%
! AGACTCTGCAGAGTATTTGA+AGG + chr8_1:83280614-83280633 Msa1220230:CDS 40.0%
CATGAGTGAAGAAGAATCGA+TGG + chr8_1:83280638-83280657 Msa1220230:CDS 40.0%
AACCTTCTGTTGGATGAGTT+GGG + chr8_1:83280675-83280694 Msa1220230:CDS 40.0%
TGATCAGCATCAACAGGTAA+GGG - chr8_1:83280732-83280751 None:intergenic 40.0%
TTGATCAGCATCAACAGGTA+AGG - chr8_1:83280733-83280752 None:intergenic 40.0%
GGTAATTGATCAGCATCAAC+AGG - chr8_1:83280738-83280757 None:intergenic 40.0%
! CTGAATGGTGTTTTATACCC+TGG - chr8_1:83280771-83280790 None:intergenic 40.0%
CATTCAGACTTCTTCCGTAT+GGG + chr8_1:83280784-83280803 Msa1220230:CDS 40.0%
ATTCAGACTTCTTCCGTATG+GGG + chr8_1:83280785-83280804 Msa1220230:CDS 40.0%
AAACAAGGTTTCACCCCATA+CGG - chr8_1:83280801-83280820 None:intergenic 40.0%
CATGTCAGTCATTTCCTTGT+TGG - chr8_1:83280826-83280845 None:intergenic 40.0%
GGAAGAAGTAGAGAACTTCA+AGG + chr8_1:83280964-83280983 Msa1220230:intron 40.0%
CTAGAGCTATAGTAAAGCTG+TGG + chr8_1:83280992-83281011 Msa1220230:CDS 40.0%
GCAAAAATAGCCATCAAACG+TGG + chr8_1:83281030-83281049 Msa1220230:CDS 40.0%
! ACTCTTTTAGTCAACAGCCA+AGG - chr8_1:83281210-83281229 None:intergenic 40.0%
TCCAAGAAATTCGAGAGTCT+TGG + chr8_1:83281647-83281666 Msa1220230:intron 40.0%
ACCAAGACTCTCGAATTTCT+TGG - chr8_1:83281651-83281670 None:intergenic 40.0%
ACTTATGTTATGGCCGTTGT+GGG - chr8_1:83281787-83281806 None:intergenic 40.0%
TACTTATGTTATGGCCGTTG+TGG - chr8_1:83281788-83281807 None:intergenic 40.0%
! CAAGCGAGTTTAAAGCTTTC+AGG + chr8_1:83281834-83281853 Msa1220230:intron 40.0%
TCAGTGGCATAGCCTAATTA+TGG - chr8_1:83281866-83281885 None:intergenic 40.0%
! TATGTTTATTCCTTGGCTCG+AGG + chr8_1:83282013-83282032 Msa1220230:intron 40.0%
TAAAATTTCACCTCGAGCCA+AGG - chr8_1:83282026-83282045 None:intergenic 40.0%
!! TTGGCTCGAGGTGAAATTTT+AGG + chr8_1:83282025-83282044 Msa1220230:intron 40.0%
TTTGTTAACCTTCCCTCAAG+TGG + chr8_1:83282154-83282173 Msa1220230:intron 40.0%
TTGTTAACCTTCCCTCAAGT+GGG + chr8_1:83282155-83282174 Msa1220230:intron 40.0%
AACTGATAACACCCACTTGA+GGG - chr8_1:83282169-83282188 None:intergenic 40.0%
ACTTACCATACCGTGCTTAT+TGG + chr8_1:83282463-83282482 Msa1220230:intron 40.0%
CAATTGCAGCAAATCACTTG+TGG - chr8_1:83282582-83282601 None:intergenic 40.0%
TTGAAGGATAAGCCTGAATG+TGG + chr8_1:83282599-83282618 Msa1220230:intron 40.0%
GCATTTGCAGAAATTGACTG+GGG + chr8_1:83282912-83282931 Msa1220230:intron 40.0%
CATTTGCAGAAATTGACTGG+GGG + chr8_1:83282913-83282932 Msa1220230:intron 40.0%
ATGTCTCCAAATCAGTTGGA+AGG - chr8_1:83283433-83283452 None:intergenic 40.0%
! AGCTTTATGCTTAGCTGCTT+TGG + chr8_1:83283541-83283560 Msa1220230:intron 40.0%
! ATATCTTTGGAAGCTGAGAG+TGG + chr8_1:83283723-83283742 Msa1220230:CDS 40.0%
ATCTGTAGACAAGGATACCA+AGG + chr8_1:83283758-83283777 Msa1220230:CDS 40.0%
TCTGTAGACAAGGATACCAA+GGG + chr8_1:83283759-83283778 Msa1220230:CDS 40.0%
! CTTCGTGACAACAAGCTTTT+GGG - chr8_1:83283840-83283859 None:intergenic 40.0%
! TCTTCGTGACAACAAGCTTT+TGG - chr8_1:83283841-83283860 None:intergenic 40.0%
TATTGAGCTTCAAAGACGAG+AGG + chr8_1:83283878-83283897 Msa1220230:CDS 40.0%
!!! TTCTTTTTTGGTAGTGGTCG+GGG + chr8_1:83283916-83283935 Msa1220230:intron 40.0%
GCATAAAATATGCAAGGTCC+AGG - chr8_1:83283949-83283968 None:intergenic 40.0%
TGAGCTTAACTCAGTTGGTT+GGG - chr8_1:83283977-83283996 None:intergenic 40.0%
TGTCATCATGGGAAGAAACA+TGG - chr8_1:83284297-83284316 None:intergenic 40.0%
GAGGTCTTTCATGTCATCAT+GGG - chr8_1:83284308-83284327 None:intergenic 40.0%
!!! GCGCTGATTTTTGTGGTTGA+AGG + chr8_1:83279032-83279051 Msa1220230:five_prime_UTR 45.0%
!!! TTAGGGTTTTGGTTTGGGGT+GGG - chr8_1:83279365-83279384 None:intergenic 45.0%
!!! TTTAGGGTTTTGGTTTGGGG+TGG - chr8_1:83279366-83279385 None:intergenic 45.0%
!! AACTTGAGCCGTTTTGTGGT+TGG - chr8_1:83279406-83279425 None:intergenic 45.0%
! GTTGCTGTTGTTCTTGCCAT+GGG - chr8_1:83279518-83279537 None:intergenic 45.0%
! TGTTGCTGTTGTTCTTGCCA+TGG - chr8_1:83279519-83279538 None:intergenic 45.0%
TGTGGTTGTTCCACTAGTTC+TGG - chr8_1:83279564-83279583 None:intergenic 45.0%
TGCCAAGGAGATAAACGCTT+TGG - chr8_1:83279627-83279646 None:intergenic 45.0%
AAACGGGTACAGCGAAATTC+TGG + chr8_1:83279720-83279739 Msa1220230:CDS 45.0%
! ATTGGCGGAGAAGTTGATTC+CGG + chr8_1:83279821-83279840 Msa1220230:CDS 45.0%
AGTCTCTGCAACTCATGTTC+CGG - chr8_1:83279843-83279862 None:intergenic 45.0%
GACTGAGAAATATGGCGTTG+AGG + chr8_1:83279859-83279878 Msa1220230:CDS 45.0%
! GAGAAATATGGCGTTGAGGA+TGG + chr8_1:83279863-83279882 Msa1220230:CDS 45.0%
! AAATATGGCGTTGAGGATGG+TGG + chr8_1:83279866-83279885 Msa1220230:CDS 45.0%
TGGAGTTGCTGGTATTACTC+AGG + chr8_1:83279902-83279921 Msa1220230:CDS 45.0%
TCATACCTCACAATGCAGTG+TGG + chr8_1:83280292-83280311 Msa1220230:intron 45.0%
!! AAACTGGAGGTATTGTGGTG+TGG + chr8_1:83280409-83280428 Msa1220230:CDS 45.0%
GAATGCTGTGGACAATTCAG+TGG + chr8_1:83280521-83280540 Msa1220230:CDS 45.0%
GTGGACAATTCAGTGGATGT+TGG + chr8_1:83280528-83280547 Msa1220230:CDS 45.0%
AATTCAGTGGATGTTGGGAG+TGG + chr8_1:83280534-83280553 Msa1220230:CDS 45.0%
ATTCAGTGGATGTTGGGAGT+GGG + chr8_1:83280535-83280554 Msa1220230:CDS 45.0%
GATCGAACTCAACCTTCTGT+TGG + chr8_1:83280665-83280684 Msa1220230:CDS 45.0%
CAACCTTCTGTTGGATGAGT+TGG + chr8_1:83280674-83280693 Msa1220230:CDS 45.0%
TGCTGATCAATTACCTGCTG+TGG + chr8_1:83280743-83280762 Msa1220230:CDS 45.0%
AATTACCTGCTGTGGTTCCA+GGG + chr8_1:83280751-83280770 Msa1220230:CDS 45.0%
CCATACGGAAGAAGTCTGAA+TGG - chr8_1:83280786-83280805 None:intergenic 45.0%
CCATTCAGACTTCTTCCGTA+TGG + chr8_1:83280783-83280802 Msa1220230:CDS 45.0%
AGGAAATGACTGACATGCGT+AGG + chr8_1:83280829-83280848 Msa1220230:CDS 45.0%
GCGTAGGATTGCTAGAAGAA+CGG + chr8_1:83280845-83280864 Msa1220230:CDS 45.0%
GAGAGCTTCTTGCATACCAA+GGG - chr8_1:83280883-83280902 None:intergenic 45.0%
AGAGAGCTTCTTGCATACCA+AGG - chr8_1:83280884-83280903 None:intergenic 45.0%
ATAGGGAACTCCACGTTTGA+TGG - chr8_1:83281043-83281062 None:intergenic 45.0%
! CTTTTAGTCAACAGCCAAGG+AGG - chr8_1:83281207-83281226 None:intergenic 45.0%
TACCTAAAACCTGCCCACAA+CGG + chr8_1:83281771-83281790 Msa1220230:intron 45.0%
CAACTGATAACACCCACTTG+AGG - chr8_1:83282170-83282189 None:intergenic 45.0%
CAGAATGTGTGTGACTTTCG+TGG + chr8_1:83282302-83282321 Msa1220230:intron 45.0%
AGCACGGTATGGTAAGTTCA+AGG - chr8_1:83282460-83282479 None:intergenic 45.0%
TCACACCAATAAGCACGGTA+TGG - chr8_1:83282471-83282490 None:intergenic 45.0%
TTCATGGGAGTGAGTTGCTA+TGG + chr8_1:83282550-83282569 Msa1220230:intron 45.0%
TGCATGCAAGAACCACATTC+AGG - chr8_1:83282614-83282633 None:intergenic 45.0%
! TTGTCTCTCAGTCAGGGTTT+TGG - chr8_1:83283010-83283029 None:intergenic 45.0%
AACTGTTCTCCAACAAGACG+AGG + chr8_1:83283035-83283054 Msa1220230:CDS 45.0%
CTTTCTCTTCCTCGTCTTGT+TGG - chr8_1:83283047-83283066 None:intergenic 45.0%
TCTCAAATGCCGTTACTTGC+TGG + chr8_1:83283111-83283130 Msa1220230:CDS 45.0%
! ACTTGGTTGATGTCCCCAAT+TGG - chr8_1:83283166-83283185 None:intergenic 45.0%
AAGGTTCAGGAAGTCTGAGA+AGG + chr8_1:83283370-83283389 Msa1220230:CDS 45.0%
AATCAGTTGGAAGGTCTGCT+GGG - chr8_1:83283424-83283443 None:intergenic 45.0%
AAATCAGTTGGAAGGTCTGC+TGG - chr8_1:83283425-83283444 None:intergenic 45.0%
AGCAGACCTTCCAACTGATT+TGG + chr8_1:83283424-83283443 Msa1220230:CDS 45.0%
!!! GCATGAGATTTTCAGGTAGG+CGG + chr8_1:83283592-83283611 Msa1220230:intron 45.0%
!!! CATGAGATTTTCAGGTAGGC+GGG + chr8_1:83283593-83283612 Msa1220230:intron 45.0%
ACACTGGAAATATCGCGAGT+TGG + chr8_1:83283650-83283669 Msa1220230:CDS 45.0%
GGTGCTAGTATCTGTAGACA+AGG + chr8_1:83283749-83283768 Msa1220230:CDS 45.0%
!! CTTTTGGGTCTCATAACCTG+TGG - chr8_1:83283825-83283844 None:intergenic 45.0%
!! AAGCTTGTTGTCACGAAGAC+AGG + chr8_1:83283842-83283861 Msa1220230:CDS 45.0%
GTGAGCTTAACTCAGTTGGT+TGG - chr8_1:83283978-83283997 None:intergenic 45.0%
CGAGGTCTTTCATGTCATCA+TGG - chr8_1:83284309-83284328 None:intergenic 45.0%
!! CATTTTGATAAAGACGGCGG+TGG + chr8_1:83284521-83284540 Msa1220230:three_prime_UTR 45.0%
ATGCGACACATCAAAAGGCA+TGG - chr8_1:83284649-83284668 None:intergenic 45.0%
! ATGCCTTTTGATGTGTCGCA+TGG + chr8_1:83284648-83284667 Msa1220230:three_prime_UTR 45.0%
GTTCCATGCGACACATCAAA+AGG - chr8_1:83284654-83284673 None:intergenic 45.0%
! TTGGGGTATTCCTACGACAT+TGG - chr8_1:83284711-83284730 None:intergenic 45.0%
!!! TTTATGTAAATATTTTATTT+CGG + chr8_1:83284756-83284775 Msa1220230:three_prime_UTR 5.0%
!!! GCTTGGAGCGCTGATTTTTG+TGG + chr8_1:83279025-83279044 Msa1220230:five_prime_UTR 50.0%
CTGAAGCAGAGAAACACGGA+AGG + chr8_1:83279160-83279179 Msa1220230:five_prime_UTR 50.0%
GGAACAACCACAATCCCAAG+AGG + chr8_1:83279572-83279591 Msa1220230:CDS 50.0%
AGGTTGTGGGTGTTCCTCTT+GGG - chr8_1:83279589-83279608 None:intergenic 50.0%
! ATGGTGGAGAGGTTCAGTGT+TGG + chr8_1:83279882-83279901 Msa1220230:CDS 50.0%
! AGGTTCAGTGTTGGAGTTGC+TGG + chr8_1:83279891-83279910 Msa1220230:CDS 50.0%
AGCAACCACACTGCATTGTG+AGG - chr8_1:83280300-83280319 None:intergenic 50.0%
! AGGTATTGTGGTGTGGCGAT+CGG + chr8_1:83280416-83280435 Msa1220230:CDS 50.0%
TTCTACGCAAGGCAGCTTGT+AGG - chr8_1:83280472-83280491 None:intergenic 50.0%
GACCCAACTCATCCAACAGA+AGG - chr8_1:83280680-83280699 None:intergenic 50.0%
!! CCTGTCCAATCTTTGAAGCG+CGG - chr8_1:83280702-83280721 None:intergenic 50.0%
CAATTACCTGCTGTGGTTCC+AGG + chr8_1:83280750-83280769 Msa1220230:CDS 50.0%
TTATACCCTGGAACCACAGC+AGG - chr8_1:83280759-83280778 None:intergenic 50.0%
TGCATACCAAGGGCAAAGTG+TGG - chr8_1:83280873-83280892 None:intergenic 50.0%
TAGGATGGCCGAAGAACTCA+AGG + chr8_1:83281074-83281093 Msa1220230:CDS 50.0%
GCAGTCAACTTACCTGTGCT+TGG - chr8_1:83281911-83281930 None:intergenic 50.0%
GATAACACCCACTTGAGGGA+AGG - chr8_1:83282165-83282184 None:intergenic 50.0%
GCAAGGGTTCCAGCAAGTAA+CGG - chr8_1:83283123-83283142 None:intergenic 50.0%
TGGAACCCTTGCTGAGACTA+GGG + chr8_1:83283131-83283150 Msa1220230:CDS 50.0%
! TGGTTGATGTCCCCAATTGG+CGG - chr8_1:83283163-83283182 None:intergenic 50.0%
! TCTTTGGAAGCTGAGAGTGG+TGG + chr8_1:83283726-83283745 Msa1220230:CDS 50.0%
! CTTTGGAAGCTGAGAGTGGT+GGG + chr8_1:83283727-83283746 Msa1220230:CDS 50.0%
TTTGGAAGCTGAGAGTGGTG+GGG + chr8_1:83283728-83283747 Msa1220230:CDS 50.0%
GAAGAACTACTTCCGTCCAC+AGG + chr8_1:83283806-83283825 Msa1220230:CDS 50.0%
TGGGTCTCATAACCTGTGGA+CGG - chr8_1:83283821-83283840 None:intergenic 50.0%
GTTGTCACGAAGACAGGCAT+TGG + chr8_1:83283848-83283867 Msa1220230:CDS 50.0%
CCTCGTGAGCTTAACTCAGT+TGG - chr8_1:83283982-83284001 None:intergenic 50.0%
CCAACTGAGTTAAGCTCACG+AGG + chr8_1:83283979-83283998 Msa1220230:intron 50.0%
GGGTGTTCCTCTTGGGATTG+TGG - chr8_1:83279582-83279601 None:intergenic 55.0%
GAGGTTGTGGGTGTTCCTCT+TGG - chr8_1:83279590-83279609 None:intergenic 55.0%
GCGTTTATCTCCTTGGCACG+TGG + chr8_1:83279629-83279648 Msa1220230:CDS 55.0%
CGGGTACAGCGAAATTCTGG+TGG + chr8_1:83279723-83279742 Msa1220230:CDS 55.0%
GGTATTGTGGTGTGGCGATC+GGG + chr8_1:83280417-83280436 Msa1220230:CDS 55.0%
TGGGTCCGCGCTTCAAAGAT+TGG + chr8_1:83280694-83280713 Msa1220230:CDS 55.0%
CCGCGCTTCAAAGATTGGAC+AGG + chr8_1:83280699-83280718 Msa1220230:CDS 55.0%
AAGGAGGTCGCCAAGCAGAT+GGG - chr8_1:83281191-83281210 None:intergenic 55.0%
ATGTTATGGCCGTTGTGGGC+AGG - chr8_1:83281783-83281802 None:intergenic 55.0%
!! CGTGGCGTCTGCCTTTGTTT+TGG + chr8_1:83282320-83282339 Msa1220230:intron 55.0%
!! AGGGTTTTGGTGACAGCAGG+AGG - chr8_1:83282997-83283016 None:intergenic 55.0%
!! GTCAGGGTTTTGGTGACAGC+AGG - chr8_1:83283000-83283019 None:intergenic 55.0%
CTGGAACCCTTGCTGAGACT+AGG + chr8_1:83283130-83283149 Msa1220230:CDS 55.0%
TGCTGCCCTAGTCTCAGCAA+GGG - chr8_1:83283139-83283158 None:intergenic 55.0%
TTGCTGCCCTAGTCTCAGCA+AGG - chr8_1:83283140-83283159 None:intergenic 55.0%
TAGGGCAGCAACCGCCAATT+GGG + chr8_1:83283149-83283168 Msa1220230:CDS 55.0%
GGTAGGCGGGATGTTTATGC+TGG + chr8_1:83283606-83283625 Msa1220230:intron 55.0%
! GGGTTTTCTGCCACGTGCCA+AGG - chr8_1:83279642-83279661 None:intergenic 60.0%
!! TGGCGTTGAGGATGGTGGAG+AGG + chr8_1:83279871-83279890 Msa1220230:CDS 60.0%
CAAGGAGGTCGCCAAGCAGA+TGG - chr8_1:83281192-83281211 None:intergenic 60.0%
CATCTGCTTGGCGACCTCCT+TGG + chr8_1:83281190-83281209 Msa1220230:intron 60.0%
! GGCCGTTGTGGGCAGGTTTT+AGG - chr8_1:83281776-83281795 None:intergenic 60.0%
CTAGGGCAGCAACCGCCAAT+TGG + chr8_1:83283148-83283167 Msa1220230:CDS 60.0%
AGGGCAGCAACCGCCAATTG+GGG + chr8_1:83283150-83283169 Msa1220230:CDS 60.0%
AGTGGTCGGGGTTTGAACCC+TGG + chr8_1:83283928-83283947 Msa1220230:intron 60.0%
ACGGCGCCACACTTTGCCCT+TGG + chr8_1:83280864-83280883 Msa1220230:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 83279017 83284837 83279017 ID=Msa1220230;Name=Msa1220230
chr8_1 mRNA 83279017 83284837 83279017 ID=Msa1220230-mRNA-1;Parent=Msa1220230;Name=Msa1220230-mRNA-1;_AED=0.09;_eAED=0.09;_QI=218|1|1|1|0.77|0.7|10|400|747
chr8_1 exon 83279017 83279070 83279017 ID=Msa1220230-mRNA-1:exon:29827;Parent=Msa1220230-mRNA-1
chr8_1 exon 83279157 83280031 83279157 ID=Msa1220230-mRNA-1:exon:29828;Parent=Msa1220230-mRNA-1
chr8_1 exon 83280405 83280885 83280405 ID=Msa1220230-mRNA-1:exon:29829;Parent=Msa1220230-mRNA-1
chr8_1 exon 83280965 83281095 83280965 ID=Msa1220230-mRNA-1:exon:29830;Parent=Msa1220230-mRNA-1
chr8_1 exon 83282922 83283272 83282922 ID=Msa1220230-mRNA-1:exon:29831;Parent=Msa1220230-mRNA-1
chr8_1 exon 83283362 83283518 83283362 ID=Msa1220230-mRNA-1:exon:29832;Parent=Msa1220230-mRNA-1
chr8_1 exon 83283607 83283899 83283607 ID=Msa1220230-mRNA-1:exon:29833;Parent=Msa1220230-mRNA-1
chr8_1 exon 83284080 83284139 83284080 ID=Msa1220230-mRNA-1:exon:29834;Parent=Msa1220230-mRNA-1
chr8_1 exon 83284231 83284356 83284231 ID=Msa1220230-mRNA-1:exon:29835;Parent=Msa1220230-mRNA-1
chr8_1 exon 83284504 83284837 83284504 ID=Msa1220230-mRNA-1:exon:29836;Parent=Msa1220230-mRNA-1
chr8_1 five_prime_UTR 83279017 83279070 83279017 ID=Msa1220230-mRNA-1:five_prime_utr;Parent=Msa1220230-mRNA-1
chr8_1 five_prime_UTR 83279157 83279320 83279157 ID=Msa1220230-mRNA-1:five_prime_utr;Parent=Msa1220230-mRNA-1
chr8_1 CDS 83279321 83280031 83279321 ID=Msa1220230-mRNA-1:cds;Parent=Msa1220230-mRNA-1
chr8_1 CDS 83280405 83280885 83280405 ID=Msa1220230-mRNA-1:cds;Parent=Msa1220230-mRNA-1
chr8_1 CDS 83280965 83281095 83280965 ID=Msa1220230-mRNA-1:cds;Parent=Msa1220230-mRNA-1
chr8_1 CDS 83282922 83283272 83282922 ID=Msa1220230-mRNA-1:cds;Parent=Msa1220230-mRNA-1
chr8_1 CDS 83283362 83283518 83283362 ID=Msa1220230-mRNA-1:cds;Parent=Msa1220230-mRNA-1
chr8_1 CDS 83283607 83283899 83283607 ID=Msa1220230-mRNA-1:cds;Parent=Msa1220230-mRNA-1
chr8_1 CDS 83284080 83284139 83284080 ID=Msa1220230-mRNA-1:cds;Parent=Msa1220230-mRNA-1
chr8_1 CDS 83284231 83284290 83284231 ID=Msa1220230-mRNA-1:cds;Parent=Msa1220230-mRNA-1
chr8_1 three_prime_UTR 83284291 83284356 83284291 ID=Msa1220230-mRNA-1:three_prime_utr;Parent=Msa1220230-mRNA-1
chr8_1 three_prime_UTR 83284504 83284837 83284504 ID=Msa1220230-mRNA-1:three_prime_utr;Parent=Msa1220230-mRNA-1
Gene Sequence

>Msa1220230

ATGGCGCTACAACAAATCTCTCCTCTGCATTTTCAGTTTTTCCCACCCCAAACCAAAACCCTAAACCACATTTTCAACAATTCCAACCACAAAACGGCTCAAGTTGAAATTAAGAAGAAAAAACACAGACCAAGTTTCTCTGACCAAATTCGACATAAATGGTCCCTCAAATTAGCTTCCCAAACACAAAAATTCCCATGGCAAGAACAACAGCAACAACAACAACAACAACAAGACAAACCAGAACTAGTGGAACAACCACAATCCCAAGAGGAACACCCACAACCTCTTAATTTTGAGTTTCCAAAGCGTTTATCTCCTTGGCACGTGGCAGAAAACCCTAAACAACACCCACAAAATGATTCAGAATCTGATGCTTCTGAAGACAAAGATAATGTGAAACGGGTACAGCGAAATTCTGGTGGTTCTGTTATGGAAAGAGAGTTTGAAGAATCAGAAAGTAGTATTAGTAGTTTGAAGAAAAGGAGAAGTAATACTGAATTGGCGGAGAAGTTGATTCCGGAACATGAGTTGCAGAGACTGAGAAATATGGCGTTGAGGATGGTGGAGAGGTTCAGTGTTGGAGTTGCTGGTATTACTCAGGAATTGGTGGATGCTATTCATGAAAAATGGATGGTTGATGAAGTTGTTAAGTTTAAGTTTGATTCTCCTCTTTCTGCTAATATGAAAAGAGCTCATCAAATTCTCGAGAGTAAAACTGGAGGTATTGTGGTGTGGCGATCGGGAAGTTCCCTAGTGTTATATCGAGGAATGTCCTACAAGCTGCCTTGCGTAGAATCTTACACGAAAGTATATAATGGTAAGGAGAATGCTGTGGACAATTCAGTGGATGTTGGGAGTGGGAGAAGTGCTGAAATAAGTGTGAAAGAAATGGTTGGACCTATTGAATCTTTTAATCGAGACTCTGCAGAGTATTTGAAGGACATGAGTGAAGAAGAATCGATGGAATTGATCGAACTCAACCTTCTGTTGGATGAGTTGGGTCCGCGCTTCAAAGATTGGACAGGACGTGAGCCCTTACCTGTTGATGCTGATCAATTACCTGCTGTGGTTCCAGGGTATAAAACACCATTCAGACTTCTTCCGTATGGGGTGAAACCTTGTTTATCCAACAAGGAAATGACTGACATGCGTAGGATTGCTAGAAGAACGGCGCCACACTTTGCCCTTGGAAGAAGTAGAGAACTTCAAGGTCTAGCTAGAGCTATAGTAAAGCTGTGGGAAACAAGCGCTATTGCAAAAATAGCCATCAAACGTGGAGTTCCCTATACATCTAATGATAGGATGGCCGAAGAACTCAAGAAATTGACTGGGGGAACCTTACTTTCTAGAAATAAGGAATATATTGTAATTTACAGGGGAAATGACTTCTTGCCTCCTGCTGTCACCAAAACCCTGACTGAGAGACAAAAACTAACTGTTCTCCAACAAGACGAGGAAGAGAAAGCACGTCAAAATGCTTCATCGATTACTTTATCAAATAGCAAATCATCTCAAATGCCGTTACTTGCTGGAACCCTTGCTGAGACTAGGGCAGCAACCGCCAATTGGGGACATCAACCAAGTAAACAAGAAGTTGGGAAAATGATGAGAGAATCTACTTTGGATAGACTTTCTTCTTTAATCAGAAATCATGAGAGTAAACTAGCTCTAGCAAAAACAAGGTTCAGGAAGTCTGAGAAGGATTTAGCTAAAATACAGGGTGATTTTGACCCAGCAGACCTTCCAACTGATTTGGAGACATTAACTAATGAAGAGAGATCTTTGTTTAGGAAGATGGGTCTGAGTATGAAGCCATACTTACTTCTAGGTAGGCGGGATGTTTATGCTGGCACCATAGAAAACATGCATCTACACTGGAAATATCGCGAGTTGGTAAAAATACTTGTGAAAGGGAAAAATTTAGCCCAAGTTAAGCATATTGCGATATCTTTGGAAGCTGAGAGTGGTGGGGTGCTAGTATCTGTAGACAAGGATACCAAGGGCCATATAATAATTATTTATCGTGGGAAGAACTACTTCCGTCCACAGGTTATGAGACCCAAAAGCTTGTTGTCACGAAGACAGGCATTGGCTCGATCTATTGAGCTTCAAAGACGAGAGGCACTAAAACACCATATATCAGATTTACAGGAGATGATTGAGTTGCTCAAATCTGAGCTAGAGGATATGAAAAATCAAAGGGTGATTGATGGTGACCAAACTCTACTCAACACTGAATAA
Protein sequence

>Msa1220230

MALQQISPLHFQFFPPQTKTLNHIFNNSNHKTAQVEIKKKKHRPSFSDQIRHKWSLKLASQTQKFPWQEQQQQQQQQQDKPELVEQPQSQEEHPQPLNFEFPKRLSPWHVAENPKQHPQNDSESDASEDKDNVKRVQRNSGGSVMEREFEESESSISSLKKRRSNTELAEKLIPEHELQRLRNMALRMVERFSVGVAGITQELVDAIHEKWMVDEVVKFKFDSPLSANMKRAHQILESKTGGIVVWRSGSSLVLYRGMSYKLPCVESYTKVYNGKENAVDNSVDVGSGRSAEISVKEMVGPIESFNRDSAEYLKDMSEEESMELIELNLLLDELGPRFKDWTGREPLPVDADQLPAVVPGYKTPFRLLPYGVKPCLSNKEMTDMRRIARRTAPHFALGRSRELQGLARAIVKLWETSAIAKIAIKRGVPYTSNDRMAEELKKLTGGTLLSRNKEYIVIYRGNDFLPPAVTKTLTERQKLTVLQQDEEEKARQNASSITLSNSKSSQMPLLAGTLAETRAATANWGHQPSKQEVGKMMRESTLDRLSSLIRNHESKLALAKTRFRKSEKDLAKIQGDFDPADLPTDLETLTNEERSLFRKMGLSMKPYLLLGRRDVYAGTIENMHLHWKYRELVKILVKGKNLAQVKHIAISLEAESGGVLVSVDKDTKGHIIIIYRGKNYFRPQVMRPKSLLSRRQALARSIELQRREALKHHISDLQEMIELLKSELEDMKNQRVIDGDQTLLNTE*