AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0162030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0162030 MtrunA17_Chr1g0187011 96.782 839 26 1 1 839 1 838 0.0 1659
Msa0162030 MtrunA17_Chr4g0071101 50.082 609 280 6 188 784 148 744 0.0 591
Msa0162030 MtrunA17_Chr6g0484411 45.611 581 297 5 194 770 195 760 2.47e-166 503
Msa0162030 MtrunA17_Chr6g0451621 41.832 655 326 7 206 839 145 765 3.66e-160 494
Msa0162030 MtrunA17_Chr8g0391141 42.342 555 257 8 209 751 100 603 1.16e-137 422
Msa0162030 MtrunA17_Chr2g0330811 40.917 611 336 9 181 771 139 744 1.29e-132 413
Msa0162030 MtrunA17_Chr8g0366041 40.167 239 109 3 223 445 1 221 1.27e-53 185
Msa0162030 MtrunA17_Chr1g0171521 39.583 144 81 3 597 738 125 264 1.53e-24 104
Msa0162030 MtrunA17_Chr4g0067911 36.458 192 113 4 593 783 163 346 9.28e-24 103
Msa0162030 MtrunA17_Chr4g0033621 36.496 137 84 1 628 764 170 303 1.25e-19 92.4
Msa0162030 MtrunA17_Chr8g0391361 34.694 147 92 2 593 739 9 151 2.80e-19 85.9
Msa0162030 MtrunA17_Chr6g0449261 31.944 216 123 7 567 766 77 284 3.76e-17 85.9
Msa0162030 MtrunA17_Chr8g0366051 38.947 95 58 0 510 604 7 101 2.91e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0162030 AT3G23070.1 60.269 818 284 17 1 794 1 801 0.0 906
Msa0162030 AT4G14510.1 59.722 720 237 9 112 794 125 828 0.0 830
Msa0162030 AT4G29750.1 45.546 696 333 10 134 820 181 839 0.0 574
Msa0162030 AT4G29750.2 46.588 674 313 13 134 797 181 817 0.0 568
Msa0162030 AT3G18390.1 46.578 599 303 4 180 770 203 792 3.16e-177 532
Msa0162030 AT3G01370.1 40.903 753 400 11 110 835 58 792 1.74e-170 520
Msa0162030 AT5G16180.1 38.907 604 299 10 177 774 177 716 2.94e-114 364
Msa0162030 AT5G16180.2 36.977 430 202 9 177 601 177 542 3.05e-64 225
Msa0162030 AT3G25440.2 35.714 182 109 3 595 771 74 252 3.42e-27 115
Msa0162030 AT3G25440.1 35.714 182 109 3 595 771 138 316 1.28e-26 114
Msa0162030 AT3G25440.4 36.076 158 93 3 619 771 7 161 1.26e-25 108
Msa0162030 AT3G25440.3 36.076 158 93 3 619 771 7 161 1.26e-25 108
Msa0162030 AT3G25440.5 36.076 158 93 3 619 771 7 161 1.26e-25 108
Msa0162030 AT4G13070.1 39.759 166 91 4 593 757 145 302 1.11e-22 100
Msa0162030 AT2G28480.1 38.686 137 81 1 628 764 161 294 7.18e-21 95.9
Msa0162030 AT3G27550.2 36.364 143 81 4 627 767 144 278 1.28e-15 81.3
Msa0162030 AT3G27550.3 36.364 143 81 4 627 767 88 222 1.36e-15 80.9
Msa0162030 AT3G27550.1 36.364 143 81 4 627 767 88 222 1.36e-15 80.9
Msa0162030 AT5G54890.1 35.664 143 75 7 165 302 104 234 7.61e-11 65.1

Find 216 sgRNAs with CRISPR-Local

Find 546 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACCAAGAAGTCTTTATTTC+TGG 0.089553 1_4:+38205349 None:intergenic
GTTGAGAAATTGAAGAAATT+TGG 0.119699 1_4:-38207690 Msa0162030:CDS
TCTTCATCGGTTATACTTTC+AGG 0.150823 1_4:+38204193 None:intergenic
GAAGAAGGAGTGATAGAAAA+AGG 0.162996 1_4:-38207636 Msa0162030:CDS
AAAACCCCGCGTGGCGGTTT+TGG 0.168258 1_4:+38207807 None:intergenic
CTCTTTGTCAAGAGATTCTT+TGG 0.173441 1_4:+38203701 None:intergenic
AGATTTATGTTTCGGAAATT+AGG 0.239341 1_4:-38204169 Msa0162030:CDS
CTCCAGAAATAAAGACTTCT+TGG 0.246222 1_4:-38205351 Msa0162030:CDS
TAATTGCTTATACACTATTA+AGG 0.248837 1_4:-38201491 Msa0162030:three_prime_UTR
GTTCTTACTCTGTTCTGTTC+TGG 0.277137 1_4:+38208161 None:intergenic
CCCTTCAGAGTTCTTCCTTT+CGG 0.281539 1_4:-38206238 Msa0162030:CDS
TTGAGAAATTGAAGAAATTT+GGG 0.281718 1_4:-38207689 Msa0162030:CDS
AATTATCAAGGTTCTGGAAA+TGG 0.293760 1_4:-38207783 Msa0162030:CDS
ATGAAAGCTTTCTTACTTCT+TGG 0.300263 1_4:-38204139 Msa0162030:intron
TTAACATATGCTTGAGGAAT+AGG 0.312732 1_4:-38201399 Msa0162030:three_prime_UTR
GATATTCTATACTTGTTTAC+CGG 0.312793 1_4:-38203757 Msa0162030:CDS
GAAATTGAAGATGAAGATTC+TGG 0.316685 1_4:+38208136 None:intergenic
ATGCTTCCTCCAACTGTTCC+TGG 0.321744 1_4:-38206271 Msa0162030:CDS
ATGAAGAGAGATTTATGTTT+CGG 0.326409 1_4:-38204177 Msa0162030:CDS
AGCTGAGAGTGGTGGTGTTC+TGG 0.328282 1_4:-38203804 Msa0162030:CDS
TCATCTTCATAACTGACTTT+TGG 0.336078 1_4:+38206373 None:intergenic
TGTTTATTCTGTTGTATTGA+AGG 0.336472 1_4:+38206550 None:intergenic
CTCCTCATCCTGCATTGCTT+TGG 0.339324 1_4:+38205259 None:intergenic
GGAAGACTTCTGAGATTGTT+AGG 0.341719 1_4:-38207287 Msa0162030:CDS
AGATGAAGTAGACAAGTTAT+TGG 0.342599 1_4:-38206356 Msa0162030:CDS
GTAGCTCACACCTCTGTATA+AGG 0.347417 1_4:+38206579 None:intergenic
GAATGAAGAGTGGAAATTAA+AGG 0.350423 1_4:+38208076 None:intergenic
GAAGAGGATGCATGAGATAT+TGG 0.355195 1_4:-38207232 Msa0162030:CDS
ATCAATAGTACGTACTATTT+CGG 0.357584 1_4:+38202162 None:intergenic
CGGAGAGGATGATGAAAGTT+AGG 0.358160 1_4:+38207990 None:intergenic
CCATTTGGGATTGGAAGTTA+TGG 0.366402 1_4:-38207540 Msa0162030:CDS
GCCTCACAAAATTGAAGGTC+AGG 0.369104 1_4:-38201692 Msa0162030:exon
AAACTGGTGGTCTGGTGATT+TGG 0.369744 1_4:-38206621 Msa0162030:CDS
TGGAAATTAAAGGATGATTA+TGG 0.374945 1_4:+38208086 None:intergenic
CCAATCCCAAATGGTGATTC+CGG 0.385507 1_4:+38207549 None:intergenic
AAGACACCTCCACCTTCGTT+AGG 0.386983 1_4:+38204242 None:intergenic
TCAGCGGAGGCTGGGACTCT+TGG 0.390512 1_4:-38205176 Msa0162030:CDS
ATTATCAAGGTTCTGGAAAT+GGG 0.399633 1_4:-38207782 Msa0162030:CDS
CTTCATCGGTTATACTTTCA+GGG 0.406225 1_4:+38204194 None:intergenic
TTTCGCCGGAATCACCATTT+GGG 0.408552 1_4:-38207554 Msa0162030:CDS
TATCAGTGCAGAAACTCTTA+TGG 0.409703 1_4:+38207862 None:intergenic
ATTGTATAACAGATTAGATT+CGG 0.413344 1_4:-38202008 Msa0162030:CDS
TTAAAGGATGATTATGGTGT+TGG 0.414002 1_4:+38208092 None:intergenic
CAATTATCTTGACCAGTTCC+CGG 0.415828 1_4:+38203876 None:intergenic
GAGACCGACACTTGGTTTCA+AGG 0.416038 1_4:-38206212 Msa0162030:CDS
TTCTTTGGTCTCATCATTGA+AGG 0.417775 1_4:+38203716 None:intergenic
CTTGACAAAGAGAAAGGCTT+TGG 0.418224 1_4:-38203690 Msa0162030:CDS
GAAAACCCACCTCTTGTATT+AGG 0.419315 1_4:+38207573 None:intergenic
GAAGAAGAGTAAGACTTCTA+TGG 0.420084 1_4:-38207436 Msa0162030:CDS
CCAGGCCAATCTGTATATCT+AGG 0.423225 1_4:+38206322 None:intergenic
TGTGAAATATAGGTAGAAAC+AGG 0.425010 1_4:-38206066 Msa0162030:intron
TCAGAGTTGTCAGCGGAGGC+TGG 0.425100 1_4:-38205185 Msa0162030:CDS
GTGGTGAAGTGAGGTTTCCT+TGG 0.428101 1_4:-38207506 Msa0162030:CDS
TCAACTTCTTCATCCACTAC+TGG 0.428246 1_4:+38207477 None:intergenic
GGTCTGGTGATTTGGAGGTC+TGG 0.432516 1_4:-38206613 Msa0162030:CDS
GTAGTGGATAGATAGAAAAC+TGG 0.436762 1_4:+38208212 None:intergenic
AGCAGTGACACTCAATTCAT+TGG 0.437611 1_4:-38201625 Msa0162030:three_prime_UTR
CCGGAATCACCATTTGGGAT+TGG 0.439424 1_4:-38207549 Msa0162030:CDS
GAGATCATAGAGTATGCAAT+TGG 0.439472 1_4:-38201529 Msa0162030:three_prime_UTR
TAAAGGATGATTATGGTGTT+GGG 0.441276 1_4:+38208093 None:intergenic
AACAGAATAAACAGTTATAT+AGG 0.443141 1_4:-38206540 Msa0162030:CDS
CTCTTCTGCCATTCTCTCGC+TGG 0.443734 1_4:+38205952 None:intergenic
GAAGAATGTAATAGCTCGTT+CGG 0.443759 1_4:-38201586 Msa0162030:three_prime_UTR
TCAGTTGACAAAGTTTCAAA+AGG 0.445552 1_4:-38203779 Msa0162030:CDS
GTGTATAAGCAATTACATTC+AGG 0.451351 1_4:+38201499 None:intergenic
TGGGACTCTTGGCGAAACTT+TGG 0.452256 1_4:-38205165 Msa0162030:CDS
TGCACTTGCACTGGAAGTAC+CGG 0.454136 1_4:-38203895 Msa0162030:CDS
CTTCTCTACGAAGGATTGCT+AGG 0.455152 1_4:-38206183 Msa0162030:CDS
ATTGTTAGGCTTAAGTTTGA+AGG 0.455427 1_4:-38207273 Msa0162030:CDS
CATTCATGTAAATTCATCAA+TGG 0.456014 1_4:-38208054 Msa0162030:exon
GAAGTTTCTATCAGCACCTT+CGG 0.458683 1_4:-38206500 Msa0162030:CDS
AAGTTAGGAGAAGTATGAAA+TGG 0.462793 1_4:+38208005 None:intergenic
TTCTAACTTTCTAACAATGT+TGG 0.465397 1_4:+38205061 None:intergenic
AACTCTGATGTATTAATAGC+TGG 0.465778 1_4:+38205200 None:intergenic
TTGAAGAGAGGACGAGTTCG+CGG 0.469113 1_4:-38207458 Msa0162030:CDS
GTCTCATCATTGAAGGGCGC+TGG 0.469906 1_4:+38203723 None:intergenic
GCACTGGAAGTACCGGGAAC+TGG 0.473145 1_4:-38203888 Msa0162030:CDS
CATTCTTTCCCTCTCTAGCA+AGG 0.474225 1_4:+38205283 None:intergenic
AGCAAGGCTTGAGTGACATC+TGG 0.475279 1_4:+38205299 None:intergenic
ACTGGTCAAGATAATTGTTA+AGG 0.475719 1_4:-38203870 Msa0162030:CDS
AAGAAGCATAAGACGAGAAT+CGG 0.477508 1_4:-38207357 Msa0162030:CDS
AAGAAATTGTGGTGAAGAAA+CGG 0.481559 1_4:+38207970 None:intergenic
AAGTATGAAATGGGTGAAGT+TGG 0.483163 1_4:+38208015 None:intergenic
GTGGATTCCCGACGCCTATG+TGG 0.483477 1_4:-38201657 Msa0162030:three_prime_UTR
ACAGGCAGTGGCTCACATCC+AGG 0.483842 1_4:+38206304 None:intergenic
AATGAGAATATAAAAGAAGA+AGG 0.487703 1_4:-38207651 Msa0162030:CDS
CTGAAGGGAGGTTGGTAACC+AGG 0.489214 1_4:+38206253 None:intergenic
AAGAATGGCCAAAGCAATGC+AGG 0.492191 1_4:-38205267 Msa0162030:CDS
CAGAGTTGTCAGCGGAGGCT+GGG 0.492293 1_4:-38205184 Msa0162030:CDS
GCTAACTACCAGCGAGAGAA+TGG 0.492548 1_4:-38205960 Msa0162030:CDS
GAGAATGGCAGAAGAGATCA+AGG 0.492861 1_4:-38205945 Msa0162030:intron
CCACTACTAGTATCAAGCTT+TGG 0.493108 1_4:-38208196 Msa0162030:five_prime_UTR
GGCCAAAGCAATGCAGGATG+AGG 0.501682 1_4:-38205261 Msa0162030:CDS
AGTTAGGAGAAGTATGAAAT+GGG 0.501723 1_4:+38208006 None:intergenic
TACCGGATGCAGAAATTGAC+AGG 0.502091 1_4:-38205386 Msa0162030:intron
AGAGTTTCTGCACTGATACA+TGG 0.502378 1_4:-38207857 Msa0162030:CDS
CTGGTGGTCTGGTGATTTGG+AGG 0.504053 1_4:-38206618 Msa0162030:CDS
GGTAGAAACAGGCAGCTTCA+AGG 0.506557 1_4:-38206055 Msa0162030:CDS
GAATCTCTTGACAAAGAGAA+AGG 0.507492 1_4:-38203696 Msa0162030:CDS
ATAGAGAAAGTAAAGGAGGA+AGG 0.508637 1_4:-38202040 Msa0162030:CDS
AACTCTGTTTCCTTATACAG+AGG 0.508975 1_4:-38206589 Msa0162030:CDS
TATACTTGTTTACCGGGGAA+AGG 0.509017 1_4:-38203750 Msa0162030:CDS
CCATAACTTCCAATCCCAAA+TGG 0.510654 1_4:+38207540 None:intergenic
ACAAATAGAGAAAGTAAAGG+AGG 0.514034 1_4:-38202044 Msa0162030:CDS
GGATGAGCGTCATGAGCAAA+AGG 0.516003 1_4:-38205114 Msa0162030:CDS
TGCAGCCATGATCAAATTGT+GGG 0.520807 1_4:-38206026 Msa0162030:CDS
TCGAGAACATGCACTTGCAC+TGG 0.523975 1_4:-38203904 Msa0162030:CDS
AATTTGCCTCACAAAATTGA+AGG 0.526100 1_4:-38201697 Msa0162030:exon
AAGACGAGAATCGGTGGTGG+TGG 0.526783 1_4:-38207348 Msa0162030:CDS
GTGAGGCAAATTCCTCAGGT+TGG 0.528149 1_4:+38201708 None:intergenic
ATATTCTATACTTGTTTACC+GGG 0.530412 1_4:-38203756 Msa0162030:CDS
TGACGATCCACATAGGCGTC+GGG 0.531992 1_4:+38201650 None:intergenic
AGACACCTCCACCTTCGTTA+GGG 0.536033 1_4:+38204243 None:intergenic
CTGCAGCCATGATCAAATTG+TGG 0.537372 1_4:-38206027 Msa0162030:CDS
TCCACTACTGGTTTCTCCCA+AGG 0.538339 1_4:+38207489 None:intergenic
CTTGCTAGAGAGGGAAAGAA+TGG 0.538645 1_4:-38205282 Msa0162030:CDS
GGGATTGGAAGTTATGGAAG+TGG 0.539360 1_4:-38207534 Msa0162030:CDS
GGTTGGTAACCAGGAACAGT+TGG 0.539492 1_4:+38206262 None:intergenic
TTCAACTTTGCAAAGTAGAG+TGG 0.539632 1_4:-38202197 Msa0162030:CDS
CCTCACAAAATTGAAGGTCA+GGG 0.539886 1_4:-38201691 Msa0162030:exon
CTCTTCCTGAGTCTGAATTG+AGG 0.540388 1_4:-38207404 Msa0162030:CDS
GGAAGCATATCCGCATCGAC+AGG 0.540888 1_4:+38206286 None:intergenic
CCTAGATATACAGATTGGCC+TGG 0.541076 1_4:-38206322 Msa0162030:CDS
GGGTGATGGTGGTAGTAGAA+TGG 0.541287 1_4:-38207721 Msa0162030:CDS
TGCTAAGTGGGGAAAGACAT+TGG 0.541926 1_4:-38205135 Msa0162030:CDS
AAACATAAATCTCTCTTCAT+CGG 0.542564 1_4:+38204180 None:intergenic
TTTGGATGCAGATGCTAAGT+GGG 0.543645 1_4:-38205147 Msa0162030:CDS
GAGGATGCATGAGATATTGG+AGG 0.550479 1_4:-38207229 Msa0162030:intron
TCACTCAAGCCTTGCTAGAG+AGG 0.551580 1_4:-38205292 Msa0162030:CDS
TTGATAAGATTCATGAGAGG+TGG 0.551714 1_4:-38207308 Msa0162030:CDS
AACCTCCTCAATTCAGACTC+AGG 0.552435 1_4:+38207399 None:intergenic
CTGATACATGGTTAAAACGC+TGG 0.556259 1_4:-38207845 Msa0162030:CDS
CTTTGGATGCAGATGCTAAG+TGG 0.556526 1_4:-38205148 Msa0162030:CDS
TTCTCTACGAAGGATTGCTA+GGG 0.556681 1_4:-38206182 Msa0162030:CDS
TCCGAAAGGAAGAACTCTGA+AGG 0.556767 1_4:+38206237 None:intergenic
TTACATGAATGAATGAAGAG+TGG 0.558200 1_4:+38208066 None:intergenic
GGAAGTTATGGAAGTGGTGA+TGG 0.559350 1_4:-38207528 Msa0162030:CDS
TGGTGAAGTGAGGTTTCCTT+GGG 0.559431 1_4:-38207505 Msa0162030:CDS
GGCGCTGGTAATCCTTTCCC+CGG 0.562420 1_4:+38203738 None:intergenic
GAAGAACTCTGAAGGGAGGT+TGG 0.563635 1_4:+38206245 None:intergenic
TAGGTCCTAGATATACAGAT+TGG 0.563776 1_4:-38206327 Msa0162030:CDS
TTCGGAGTGAGACCGACACT+TGG 0.564308 1_4:-38206220 Msa0162030:CDS
ATCGCCCAAAACCGCCACGC+GGG 0.566037 1_4:-38207812 Msa0162030:CDS
ATGTTGCCTAATACAAGAGG+TGG 0.568407 1_4:-38207579 Msa0162030:CDS
GGAACAAATAGAGAAAGTAA+AGG 0.569961 1_4:-38202047 Msa0162030:CDS
TGGATGAAGAAGTTGAAGAG+AGG 0.576446 1_4:-38207470 Msa0162030:CDS
GAATCAGAAGTAAACTCAGA+AGG 0.579916 1_4:+38206460 None:intergenic
CAAAGCAATGCAGGATGAGG+AGG 0.581413 1_4:-38205258 Msa0162030:CDS
GAAGTAGACAAGTTATTGGA+TGG 0.582788 1_4:-38206352 Msa0162030:CDS
CACTCAAGCCTTGCTAGAGA+GGG 0.584330 1_4:-38205291 Msa0162030:CDS
TCTTTGGTCTCATCATTGAA+GGG 0.584817 1_4:+38203717 None:intergenic
GACAAACCTAATGCAAAATG+TGG 0.585233 1_4:+38206151 None:intergenic
TTGACGATCCACATAGGCGT+CGG 0.588507 1_4:+38201649 None:intergenic
TGTTTCGGAAATTAGGATTG+CGG 0.589994 1_4:-38204162 Msa0162030:CDS
GACAAGTTATTGGATGGTCT+AGG 0.590262 1_4:-38206346 Msa0162030:CDS
ATATCCGCATCGACAGGCAG+TGG 0.591204 1_4:+38206292 None:intergenic
CCAAAGCTTGATACTAGTAG+TGG 0.592042 1_4:+38208196 None:intergenic
TGGTAACCAGGAACAGTTGG+AGG 0.592101 1_4:+38206265 None:intergenic
TTCGTGGTTGCAGGTAGACG+TGG 0.597803 1_4:-38203944 Msa0162030:intron
GTGGTGATGGTGGTGAAGTG+AGG 0.598555 1_4:-38207515 Msa0162030:CDS
TCGCCCAAAACCGCCACGCG+GGG 0.599879 1_4:-38207811 Msa0162030:CDS
ACCAGGCTGAAAGAAAGATA+AGG 0.600022 1_4:-38204279 Msa0162030:intron
CCGAAAGGAAGAACTCTGAA+GGG 0.601959 1_4:+38206238 None:intergenic
CTCTAGGATTGAATAAGTCA+AGG 0.601987 1_4:-38201428 Msa0162030:three_prime_UTR
TTCCTGAGTCTGAATTGAGG+AGG 0.601987 1_4:-38207401 Msa0162030:CDS
AAGAGCCCTAACGAAGGTGG+AGG 0.604594 1_4:-38204248 Msa0162030:CDS
ATACAGAGGTGTGAGCTACA+AGG 0.605536 1_4:-38206575 Msa0162030:CDS
GGATGATGAGGAAGAAGTTG+AGG 0.605917 1_4:-38201792 Msa0162030:CDS
ATTGAGTATGAACTTATCAG+TGG 0.606193 1_4:+38201557 None:intergenic
TATTATTTATTTCCAACCTG+AGG 0.607464 1_4:-38201720 Msa0162030:CDS
GCCTCCTTGAAACCAAGTGT+CGG 0.611476 1_4:+38206208 None:intergenic
TAATTTAAAACCCCGCGTGG+CGG 0.613765 1_4:+38207801 None:intergenic
TGAGAGAAGTAGAACAACTA+CGG 0.614641 1_4:-38205088 Msa0162030:CDS
TATGTAGGCGGAGGATGATG+AGG 0.615791 1_4:-38201804 Msa0162030:intron
AGTTATGGAAGTGGTGATGG+TGG 0.618975 1_4:-38207525 Msa0162030:CDS
CTGCTATTGACGATCCACAT+AGG 0.620633 1_4:+38201643 None:intergenic
GCACTTGCACTGGAAGTACC+GGG 0.621505 1_4:-38203894 Msa0162030:CDS
AAACCTAATGCAAAATGTGG+AGG 0.626002 1_4:+38206154 None:intergenic
AGGAGGCAACTTCTCTACGA+AGG 0.627538 1_4:-38206192 Msa0162030:CDS
AACCTAATGCAAAATGTGGA+GGG 0.630249 1_4:+38206155 None:intergenic
AATGGGTGAAGTTGGCGAGT+GGG 0.631051 1_4:+38208023 None:intergenic
TCCACTTCAAAATCATCCGA+AGG 0.632694 1_4:+38206484 None:intergenic
ATGCTGCACTTAACATGAAG+AGG 0.634551 1_4:-38207248 Msa0162030:CDS
TCCTTGGGAGAAACCAGTAG+TGG 0.634853 1_4:-38207490 Msa0162030:CDS
TACATCAGAGTTGTCAGCGG+AGG 0.635595 1_4:-38205189 Msa0162030:CDS
GGAATGTTGCCTAATACAAG+AGG 0.637246 1_4:-38207582 Msa0162030:CDS
TGAAAGAGCCCTAACGAAGG+TGG 0.638631 1_4:-38204251 Msa0162030:CDS
AGTGTCGGTCTCACTCCGAA+AGG 0.639614 1_4:+38206223 None:intergenic
AAGCATAAGACGAGAATCGG+TGG 0.644894 1_4:-38207354 Msa0162030:CDS
AATCGAGCTTCAACGACATG+AGG 0.650049 1_4:-38203660 Msa0162030:intron
TTTGATAGCTCTGATGATGA+GGG 0.651437 1_4:-38207741 Msa0162030:CDS
TGTTGCCTAATACAAGAGGT+GGG 0.652697 1_4:-38207578 Msa0162030:CDS
TCTGATGATGAGGGTGATGG+TGG 0.657403 1_4:-38207732 Msa0162030:CDS
AAATGGGTGAAGTTGGCGAG+TGG 0.658144 1_4:+38208022 None:intergenic
AGCTCTGATGATGAGGGTGA+TGG 0.659433 1_4:-38207735 Msa0162030:CDS
GAAGAGTAAGACTTCTATGG+CGG 0.662513 1_4:-38207433 Msa0162030:CDS
CTAGCACTTGAAGCTGAGAG+TGG 0.663111 1_4:-38203815 Msa0162030:CDS
CTCACAAAATTGAAGGTCAG+GGG 0.663537 1_4:-38201690 Msa0162030:exon
CATAAGACGAGAATCGGTGG+TGG 0.666864 1_4:-38207351 Msa0162030:CDS
GCACTTGAAGCTGAGAGTGG+TGG 0.667962 1_4:-38203812 Msa0162030:CDS
AGTCTGTTAACATATGCTTG+AGG 0.672068 1_4:-38201405 Msa0162030:three_prime_UTR
TACAGATGATGCTAACTCTG+AGG 0.680012 1_4:-38201978 Msa0162030:intron
AGCTGAAAGAGCCCTAACGA+AGG 0.684719 1_4:-38204254 Msa0162030:CDS
CGGATGCAGAAATTGACAGG+TGG 0.689412 1_4:-38205383 Msa0162030:intron
GCAAAAGTTGCACTAAAACG+TGG 0.689961 1_4:-38205989 Msa0162030:CDS
TGATAATTTAAAACCCCGCG+TGG 0.693389 1_4:+38207798 None:intergenic
AAAGGAAGAACTCTGAAGGG+AGG 0.696481 1_4:+38206241 None:intergenic
AATCGCCCAAAACCGCCACG+CGG 0.701184 1_4:-38207813 Msa0162030:CDS
TTGGATGCAGATGCTAAGTG+GGG 0.702741 1_4:-38205146 Msa0162030:CDS
ATTGTGGTGAAGAAACGGAG+AGG 0.704551 1_4:+38207975 None:intergenic
TGAGCCACTGCCTGTCGATG+CGG 0.707365 1_4:-38206296 Msa0162030:CDS
TATTCTATACTTGTTTACCG+GGG 0.713369 1_4:-38203755 Msa0162030:CDS
TAATACATCAGAGTTGTCAG+CGG 0.714007 1_4:-38205192 Msa0162030:CDS
TCTCTACGAAGGATTGCTAG+GGG 0.724320 1_4:-38206181 Msa0162030:CDS
ACCGACACTTGGTTTCAAGG+AGG 0.731383 1_4:-38206209 Msa0162030:CDS
TTGTTGATAAGATTCATGAG+AGG 0.747036 1_4:-38207311 Msa0162030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTAATTGTGAAATAT+AGG - chr1_4:38203455-38203474 Msa0162030:intron 10.0%
!!! ATGAATATTTTTTTTATTAC+CGG - chr1_4:38204128-38204147 Msa0162030:intron 10.0%
!!! TAAGGAATTTTTTTTTTAAT+GGG + chr1_4:38204760-38204779 None:intergenic 10.0%
!!! ATAAGGAATTTTTTTTTTAA+TGG + chr1_4:38204761-38204780 None:intergenic 10.0%
!!! ATTTTTAAAAGATAAATACA+AGG + chr1_4:38204986-38205005 None:intergenic 10.0%
!!! AATATGTTTTTGTTTTATTA+CGG - chr1_4:38205036-38205055 Msa0162030:intron 10.0%
!!! ATATACAATATTTAAAATCA+GGG + chr1_4:38205108-38205127 None:intergenic 10.0%
!!! TATATACAATATTTAAAATC+AGG + chr1_4:38205109-38205128 None:intergenic 10.0%
!! TAATCATGTAAATTATAAAT+TGG + chr1_4:38205211-38205230 None:intergenic 10.0%
!! TATACAGTATTTATATTAAT+TGG + chr1_4:38205982-38206001 None:intergenic 10.0%
!! ACAAAATTTATTAGTTAAAC+CGG + chr1_4:38203629-38203648 None:intergenic 15.0%
!!! GCTATAAATTTTTTTTTTTG+AGG + chr1_4:38204714-38204733 None:intergenic 15.0%
!!! AAGGAATTTTTTTTTTAATG+GGG + chr1_4:38204759-38204778 None:intergenic 15.0%
!!! ATATGTTTTTGTTTTATTAC+GGG - chr1_4:38205037-38205056 Msa0162030:intron 15.0%
!! AGAAAAAAAAATGAAAGATT+GGG + chr1_4:38206444-38206463 None:intergenic 15.0%
!!! ATGTATGTATATACATTTTT+TGG - chr1_4:38208073-38208092 Msa0162030:five_prime_UTR 15.0%
!!! AGAAAGATAAGTGAAATTTT+TGG + chr1_4:38201629-38201648 None:intergenic 20.0%
!! AAACTCTTATGGTAAAAAAT+GGG + chr1_4:38201661-38201680 None:intergenic 20.0%
!! TTGAGAAATTGAAGAAATTT+GGG - chr1_4:38201842-38201861 Msa0162030:intron 20.0%
!! AATGAGAATATAAAAGAAGA+AGG - chr1_4:38201880-38201899 Msa0162030:intron 20.0%
!!! GATATATTTTATGTAGAAGA+AGG - chr1_4:38201928-38201947 Msa0162030:intron 20.0%
!!! ATATTTTGTAGACATTTCAT+TGG - chr1_4:38202795-38202814 Msa0162030:intron 20.0%
!! AACAGAATAAACAGTTATAT+AGG - chr1_4:38202991-38203010 Msa0162030:intron 20.0%
!! CAAAATTTATTAGTTAAACC+GGG + chr1_4:38203628-38203647 None:intergenic 20.0%
!! ACTTATACTGAGAAATTAAT+GGG - chr1_4:38203862-38203881 Msa0162030:CDS 20.0%
!! ACAGCTATAACAAAAAATTT+AGG + chr1_4:38204560-38204579 None:intergenic 20.0%
!!! AAATTTTTTGTTATAGCTGT+TGG - chr1_4:38204560-38204579 Msa0162030:intron 20.0%
!!! AATTTTTTGTTATAGCTGTT+GGG - chr1_4:38204561-38204580 Msa0162030:intron 20.0%
!!! TTTAAAATGATGAATGTCTA+GGG + chr1_4:38204630-38204649 None:intergenic 20.0%
!!! TATTCATTATCATCATCTTT+TGG - chr1_4:38205158-38205177 Msa0162030:CDS 20.0%
!! ATTAAAATGAATGTAATTCG+TGG - chr1_4:38205571-38205590 Msa0162030:intron 20.0%
!!! TTTTACAATTAGCATTTGAT+TGG + chr1_4:38205919-38205938 None:intergenic 20.0%
!! TATTCAGAATAAATAGGAAA+GGG + chr1_4:38206200-38206219 None:intergenic 20.0%
!! GTATTGTATTCAGAATAAAT+AGG + chr1_4:38206206-38206225 None:intergenic 20.0%
!! ATACATCAAGTTTATCAATT+TGG - chr1_4:38206406-38206425 Msa0162030:CDS 20.0%
!! CAGAAAAAAAAATGAAAGAT+TGG + chr1_4:38206445-38206464 None:intergenic 20.0%
!!! CAATCTTTCATTTTTTTTTC+TGG - chr1_4:38206443-38206462 Msa0162030:CDS 20.0%
!! GTTTAGTGTTTATAAAGATT+GGG + chr1_4:38206974-38206993 None:intergenic 20.0%
!! AGTTTAGTGTTTATAAAGAT+TGG + chr1_4:38206975-38206994 None:intergenic 20.0%
!! TAAATGATATATTCAGTAGA+AGG - chr1_4:38207169-38207188 Msa0162030:intron 20.0%
!! TGTATATTATATGAAAACCT+AGG - chr1_4:38207425-38207444 Msa0162030:CDS 20.0%
!! ATTGTATAACAGATTAGATT+CGG - chr1_4:38207523-38207542 Msa0162030:CDS 20.0%
!! TATTTACACGCAAATATAAA+AGG + chr1_4:38207694-38207713 None:intergenic 20.0%
!! TATCTTATACTTGTATATGT+AGG - chr1_4:38207712-38207731 Msa0162030:CDS 20.0%
!! TAATTGCTTATACACTATTA+AGG - chr1_4:38208040-38208059 Msa0162030:exon 20.0%
!!! TTTTCTATAAGCTAATATGA+AGG + chr1_4:38208159-38208178 None:intergenic 20.0%
! TGGAAATTAAAGGATGATTA+TGG + chr1_4:38201448-38201467 None:intergenic 25.0%
! CATTCATGTAAATTCATCAA+TGG - chr1_4:38201477-38201496 Msa0162030:three_prime_UTR 25.0%
!!! AGATAAGTGAAATTTTTGGT+GGG + chr1_4:38201625-38201644 None:intergenic 25.0%
!!! AAGATAAGTGAAATTTTTGG+TGG + chr1_4:38201626-38201645 None:intergenic 25.0%
! AACTCTTATGGTAAAAAATG+GGG + chr1_4:38201660-38201679 None:intergenic 25.0%
! GAAACTCTTATGGTAAAAAA+TGG + chr1_4:38201662-38201681 None:intergenic 25.0%
!!! GTTTTAAATTATCAAGGTTC+TGG - chr1_4:38201742-38201761 Msa0162030:CDS 25.0%
! GTTGAGAAATTGAAGAAATT+TGG - chr1_4:38201841-38201860 Msa0162030:intron 25.0%
! TTGAATATACAAGAAGCAAA+AGG + chr1_4:38202339-38202358 None:intergenic 25.0%
! ATACCTCAGTGTTTAAATAT+AGG - chr1_4:38202448-38202467 Msa0162030:intron 25.0%
! ATAAACAAACTCTATCTTGA+AGG + chr1_4:38202559-38202578 None:intergenic 25.0%
!!! TAGTATTTATTGTTGGTTCA+GGG - chr1_4:38202589-38202608 Msa0162030:intron 25.0%
! TGCAGTTGAAAATTCAAATT+AGG - chr1_4:38202636-38202655 Msa0162030:intron 25.0%
! TACTACATTCAGAAAAAAAC+TGG - chr1_4:38202894-38202913 Msa0162030:intron 25.0%
! TGTTTATTCTGTTGTATTGA+AGG + chr1_4:38202984-38203003 None:intergenic 25.0%
! AAAAACATCGTTGGAAAAAT+TGG - chr1_4:38203100-38203119 Msa0162030:intron 25.0%
! AAAATTTATGCTTTAGCGAA+TGG + chr1_4:38203716-38203735 None:intergenic 25.0%
!! TTTTTGCATTATTCGTTTGT+AGG - chr1_4:38203761-38203780 Msa0162030:CDS 25.0%
! CACTTATACTGAGAAATTAA+TGG - chr1_4:38203861-38203880 Msa0162030:CDS 25.0%
! AACACAAACAAAATAAGATC+AGG - chr1_4:38204057-38204076 Msa0162030:intron 25.0%
! TTCTAACTTTCTAACAATGT+TGG + chr1_4:38204473-38204492 None:intergenic 25.0%
!! GTTTAAAATGATGAATGTCT+AGG + chr1_4:38204631-38204650 None:intergenic 25.0%
!! AGACATTCATCATTTTAAAC+AGG - chr1_4:38204631-38204650 Msa0162030:intron 25.0%
!! GACATTCATCATTTTAAACA+GGG - chr1_4:38204632-38204651 Msa0162030:intron 25.0%
! TTGTATATACACAATGTTAG+TGG - chr1_4:38205120-38205139 Msa0162030:CDS 25.0%
! AATAATCCTAGAGTGAAATT+AGG + chr1_4:38205186-38205205 None:intergenic 25.0%
! AAACATAAATCTCTCTTCAT+CGG + chr1_4:38205354-38205373 None:intergenic 25.0%
! ATGAAGAGAGATTTATGTTT+CGG - chr1_4:38205354-38205373 Msa0162030:CDS 25.0%
! AGATTTATGTTTCGGAAATT+AGG - chr1_4:38205362-38205381 Msa0162030:CDS 25.0%
!! ATTCATGATAATGATATGTG+AGG - chr1_4:38205533-38205552 Msa0162030:intron 25.0%
!! TTCATGATAATGATATGTGA+GGG - chr1_4:38205534-38205553 Msa0162030:intron 25.0%
! GATATTCTATACTTGTTTAC+CGG - chr1_4:38205774-38205793 Msa0162030:intron 25.0%
! ATATTCTATACTTGTTTACC+GGG - chr1_4:38205775-38205794 Msa0162030:intron 25.0%
! ATTTACAAACTTACACAGAA+AGG - chr1_4:38206062-38206081 Msa0162030:intron 25.0%
! GTATTCAGAATAAATAGGAA+AGG + chr1_4:38206201-38206220 None:intergenic 25.0%
!!! TGGCTTAACAACATTTTTTT+TGG - chr1_4:38206463-38206482 Msa0162030:CDS 25.0%
!!! AAGTTTTAACTCTTAGAGTT+TGG - chr1_4:38206593-38206612 Msa0162030:CDS 25.0%
!!! AGTTTTAACTCTTAGAGTTT+GGG - chr1_4:38206594-38206613 Msa0162030:CDS 25.0%
! GTGTAGTGTTTATAAAGATT+GGG + chr1_4:38206667-38206686 None:intergenic 25.0%
! TGTGTAGTGTTTATAAAGAT+TGG + chr1_4:38206668-38206687 None:intergenic 25.0%
! AATTGCCTAGATATATCATA+TGG + chr1_4:38206693-38206712 None:intergenic 25.0%
! ATCAATAGTACGTACTATTT+CGG + chr1_4:38207372-38207391 None:intergenic 25.0%
! CATATAATATACAGCTTAGA+TGG + chr1_4:38207418-38207437 None:intergenic 25.0%
! TATTATTTATTTCCAACCTG+AGG - chr1_4:38207811-38207830 Msa0162030:CDS 25.0%
!!! ATTTTTTGGTTAAGTTCTCT+AGG - chr1_4:38208087-38208106 Msa0162030:five_prime_UTR 25.0%
GAAATTGAAGATGAAGATTC+TGG + chr1_4:38201398-38201417 None:intergenic 30.0%
TAAAGGATGATTATGGTGTT+GGG + chr1_4:38201441-38201460 None:intergenic 30.0%
TTAAAGGATGATTATGGTGT+TGG + chr1_4:38201442-38201461 None:intergenic 30.0%
GAATGAAGAGTGGAAATTAA+AGG + chr1_4:38201458-38201477 None:intergenic 30.0%
TTACATGAATGAATGAAGAG+TGG + chr1_4:38201468-38201487 None:intergenic 30.0%
! AGTTAGGAGAAGTATGAAAT+GGG + chr1_4:38201528-38201547 None:intergenic 30.0%
! AAGTTAGGAGAAGTATGAAA+TGG + chr1_4:38201529-38201548 None:intergenic 30.0%
AAGAAATTGTGGTGAAGAAA+CGG + chr1_4:38201564-38201583 None:intergenic 30.0%
TGAAGAAGAAGAAGAAATTG+TGG + chr1_4:38201575-38201594 None:intergenic 30.0%
!! AATTATCAAGGTTCTGGAAA+TGG - chr1_4:38201748-38201767 Msa0162030:CDS 30.0%
!! ATTATCAAGGTTCTGGAAAT+GGG - chr1_4:38201749-38201768 Msa0162030:CDS 30.0%
AAGAAGGAGTGATAGAAAAA+GGG - chr1_4:38201896-38201915 Msa0162030:intron 30.0%
! TTGTTGATAAGATTCATGAG+AGG - chr1_4:38202220-38202239 Msa0162030:intron 30.0%
ATTGTTAGGCTTAAGTTTGA+AGG - chr1_4:38202258-38202277 Msa0162030:intron 30.0%
TAAATGCATACAATTCGAGT+TGG + chr1_4:38202429-38202448 None:intergenic 30.0%
ATCACGGAAATTAAGAAAGT+TGG - chr1_4:38202485-38202504 Msa0162030:intron 30.0%
TCCATCGTAGTATTTATTGT+TGG - chr1_4:38202582-38202601 Msa0162030:intron 30.0%
ACCAACAATAAATACTACGA+TGG + chr1_4:38202586-38202605 None:intergenic 30.0%
!! GTAGTATTTATTGTTGGTTC+AGG - chr1_4:38202588-38202607 Msa0162030:intron 30.0%
!! AGTATTTATTGTTGGTTCAG+GGG - chr1_4:38202590-38202609 Msa0162030:intron 30.0%
ACAATTATGCATCACTACAT+TGG + chr1_4:38202751-38202770 None:intergenic 30.0%
AATTGTGCAATCTTCTATGA+TGG - chr1_4:38202765-38202784 Msa0162030:intron 30.0%
TACATTCAGAAAAAAACTGG+TGG - chr1_4:38202897-38202916 Msa0162030:intron 30.0%
!! TCATCTTCATAACTGACTTT+TGG + chr1_4:38203161-38203180 None:intergenic 30.0%
AGATGAAGTAGACAAGTTAT+TGG - chr1_4:38203175-38203194 Msa0162030:intron 30.0%
TGTGAAATATAGGTAGAAAC+AGG - chr1_4:38203465-38203484 Msa0162030:intron 30.0%
! TTTTTCCCACAATTTGATCA+TGG + chr1_4:38203513-38203532 None:intergenic 30.0%
CATACTTAATGTCCACTTAA+TGG + chr1_4:38203790-38203809 None:intergenic 30.0%
ATGTGAGTTTGTAATTCGTA+AGG - chr1_4:38203831-38203850 Msa0162030:CDS 30.0%
TGTGAGTTTGTAATTCGTAA+GGG - chr1_4:38203832-38203851 Msa0162030:CDS 30.0%
AGATGTAAGTATCACGTTAT+AGG - chr1_4:38204027-38204046 Msa0162030:intron 30.0%
ATCTACAAATCATCACATAG+TGG + chr1_4:38204110-38204129 None:intergenic 30.0%
AACTCTGATGTATTAATAGC+TGG + chr1_4:38204334-38204353 None:intergenic 30.0%
TAGTACTTAGTAGTACTACT+GGG + chr1_4:38204736-38204755 None:intergenic 30.0%
TATCAGAGAGAAAGAGAATA+AGG + chr1_4:38204778-38204797 None:intergenic 30.0%
AGGAAAAGGAAATCAAATCA+GGG + chr1_4:38204848-38204867 None:intergenic 30.0%
! TTTGAGGTTCTTCATGTATA+CGG - chr1_4:38204948-38204967 Msa0162030:intron 30.0%
ATTTACATGATTATGATCCC+TGG - chr1_4:38205218-38205237 Msa0162030:CDS 30.0%
ATGAAAGCTTTCTTACTTCT+TGG - chr1_4:38205392-38205411 Msa0162030:intron 30.0%
ACTGGTCAAGATAATTGTTA+AGG - chr1_4:38205661-38205680 Msa0162030:intron 30.0%
TCAGTTGACAAAGTTTCAAA+AGG - chr1_4:38205752-38205771 Msa0162030:intron 30.0%
TATTCTATACTTGTTTACCG+GGG - chr1_4:38205776-38205795 Msa0162030:intron 30.0%
TCTATCAGAATGCAACAAAT+TGG + chr1_4:38205951-38205970 None:intergenic 30.0%
TTGTTGCATTCTGATAGAAA+CGG - chr1_4:38205953-38205972 Msa0162030:CDS 30.0%
GTTAGATATCTAATTGAGAG+TGG + chr1_4:38206386-38206405 None:intergenic 30.0%
! AATGAAAGATTGGGAAGTAT+CGG + chr1_4:38206435-38206454 None:intergenic 30.0%
!!! TTTTTTGGCTTAGTTTGTTG+TGG - chr1_4:38206478-38206497 Msa0162030:CDS 30.0%
CTAATTCAACCTTAGAAAAC+CGG - chr1_4:38206623-38206642 Msa0162030:CDS 30.0%
ACACACCATATGATATATCT+AGG - chr1_4:38206685-38206704 Msa0162030:intron 30.0%
TAGGACAGATTCTTAGAATT+TGG - chr1_4:38206902-38206921 Msa0162030:intron 30.0%
AGGACAGATTCTTAGAATTT+GGG - chr1_4:38206903-38206922 Msa0162030:intron 30.0%
TATATCTTGTTAGTCCTTGT+TGG + chr1_4:38207136-38207155 None:intergenic 30.0%
AAGGACTAACAAGATATAGT+GGG - chr1_4:38207138-38207157 Msa0162030:intron 30.0%
ACATATGCACATTTACAAGA+TGG + chr1_4:38207225-38207244 None:intergenic 30.0%
TTTGTCAATAAAATGAGGCA+AGG + chr1_4:38207294-38207313 None:intergenic 30.0%
AAACAAAGATTAGGAAACCT+AGG + chr1_4:38207445-38207464 None:intergenic 30.0%
! TTTCCTAATCTTTGTTTGTC+TGG - chr1_4:38207448-38207467 Msa0162030:CDS 30.0%
GGAACAAATAGAGAAAGTAA+AGG - chr1_4:38207484-38207503 Msa0162030:CDS 30.0%
ACAAATAGAGAAAGTAAAGG+AGG - chr1_4:38207487-38207506 Msa0162030:CDS 30.0%
CTTATACTTGTATATGTAGG+CGG - chr1_4:38207715-38207734 Msa0162030:CDS 30.0%
AATTTGCCTCACAAAATTGA+AGG - chr1_4:38207834-38207853 Msa0162030:CDS 30.0%
ATTGAGTATGAACTTATCAG+TGG + chr1_4:38207977-38207996 None:intergenic 30.0%
GTGTATAAGCAATTACATTC+AGG + chr1_4:38208035-38208054 None:intergenic 30.0%
TTAACATATGCTTGAGGAAT+AGG - chr1_4:38208132-38208151 Msa0162030:five_prime_UTR 30.0%
!! GTAGTGGATAGATAGAAAAC+TGG + chr1_4:38201322-38201341 None:intergenic 35.0%
AAGTATGAAATGGGTGAAGT+TGG + chr1_4:38201519-38201538 None:intergenic 35.0%
TATCAGTGCAGAAACTCTTA+TGG + chr1_4:38201672-38201691 None:intergenic 35.0%
!!! TTTTGATAGCTCTGATGATG+AGG - chr1_4:38201789-38201808 Msa0162030:CDS 35.0%
!! TTTGATAGCTCTGATGATGA+GGG - chr1_4:38201790-38201809 Msa0162030:CDS 35.0%
GAAGAAGGAGTGATAGAAAA+AGG - chr1_4:38201895-38201914 Msa0162030:intron 35.0%
GAAGAAGAGTAAGACTTCTA+TGG - chr1_4:38202095-38202114 Msa0162030:intron 35.0%
! AAGAAGCATAAGACGAGAAT+CGG - chr1_4:38202174-38202193 Msa0162030:intron 35.0%
TTGATAAGATTCATGAGAGG+TGG - chr1_4:38202223-38202242 Msa0162030:intron 35.0%
TTGAAAAACCTGTGCAACAT+AGG - chr1_4:38202381-38202400 Msa0162030:intron 35.0%
TGAAAAACCTGTGCAACATA+GGG - chr1_4:38202382-38202401 Msa0162030:intron 35.0%
GGACCTATATTTAAACACTG+AGG + chr1_4:38202454-38202473 None:intergenic 35.0%
TATGCATCACTACATTGGAT+TGG + chr1_4:38202746-38202765 None:intergenic 35.0%
! TTATTGATAGTCAAGGATGC+AGG + chr1_4:38202846-38202865 None:intergenic 35.0%
TCCTTGACTATCAATAACTG+TGG - chr1_4:38202849-38202868 Msa0162030:intron 35.0%
AACTCTGTTTCCTTATACAG+AGG - chr1_4:38202942-38202961 Msa0162030:intron 35.0%
GAATCAGAAGTAAACTCAGA+AGG + chr1_4:38203074-38203093 None:intergenic 35.0%
!! TTCTGAGACAAAAACATCGT+TGG - chr1_4:38203091-38203110 Msa0162030:intron 35.0%
GAAGTAGACAAGTTATTGGA+TGG - chr1_4:38203179-38203198 Msa0162030:intron 35.0%
TAGGTCCTAGATATACAGAT+TGG - chr1_4:38203204-38203223 Msa0162030:intron 35.0%
AACCTAATGCAAAATGTGGA+GGG + chr1_4:38203379-38203398 None:intergenic 35.0%
AAACCTAATGCAAAATGTGG+AGG + chr1_4:38203380-38203399 None:intergenic 35.0%
GACAAACCTAATGCAAAATG+TGG + chr1_4:38203383-38203402 None:intergenic 35.0%
AAGTGGACATTAAGTATGAG+AGG - chr1_4:38203792-38203811 Msa0162030:CDS 35.0%
CTCCAGAAATAAAGACTTCT+TGG - chr1_4:38204180-38204199 Msa0162030:CDS 35.0%
! GACCAAGAAGTCTTTATTTC+TGG + chr1_4:38204185-38204204 None:intergenic 35.0%
!! ACTTCTTGGTCTTTTATCGA+GGG - chr1_4:38204194-38204213 Msa0162030:CDS 35.0%
TAATACATCAGAGTTGTCAG+CGG - chr1_4:38204339-38204358 Msa0162030:intron 35.0%
TGAGAGAAGTAGAACAACTA+CGG - chr1_4:38204443-38204462 Msa0162030:intron 35.0%
!! TTTAGGCTTGTTGATGATGT+GGG + chr1_4:38204543-38204562 None:intergenic 35.0%
!! ATTTAGGCTTGTTGATGATG+TGG + chr1_4:38204544-38204563 None:intergenic 35.0%
! TTCATCATTTTAAACAGGGC+CGG - chr1_4:38204636-38204655 Msa0162030:intron 35.0%
GTAGTACTTAGTAGTACTAC+TGG + chr1_4:38204737-38204756 None:intergenic 35.0%
TCAAATCAGGGAAGAAGAAA+AGG + chr1_4:38204836-38204855 None:intergenic 35.0%
GAGGAAAAGGAAATCAAATC+AGG + chr1_4:38204849-38204868 None:intergenic 35.0%
CTAAAACAAGACAACAGAAG+AGG + chr1_4:38204868-38204887 None:intergenic 35.0%
!!! CTCTTCTGTTGTCTTGTTTT+AGG - chr1_4:38204866-38204885 Msa0162030:intron 35.0%
CAAGATGACTCGATTCTAAT+AGG + chr1_4:38204892-38204911 None:intergenic 35.0%
! CTTCATCGGTTATACTTTCA+GGG + chr1_4:38205340-38205359 None:intergenic 35.0%
! TCTTCATCGGTTATACTTTC+AGG + chr1_4:38205341-38205360 None:intergenic 35.0%
TGTTTCGGAAATTAGGATTG+CGG - chr1_4:38205369-38205388 Msa0162030:CDS 35.0%
!! TATGTGAGGGTATTTAGTTG+TGG - chr1_4:38205547-38205566 Msa0162030:intron 35.0%
TCTTTGGTCTCATCATTGAA+GGG + chr1_4:38205817-38205836 None:intergenic 35.0%
TTCTTTGGTCTCATCATTGA+AGG + chr1_4:38205818-38205837 None:intergenic 35.0%
CTCTTTGTCAAGAGATTCTT+TGG + chr1_4:38205833-38205852 None:intergenic 35.0%
GAATCTCTTGACAAAGAGAA+AGG - chr1_4:38205835-38205854 Msa0162030:intron 35.0%
TGTTGCATTCTGATAGAAAC+GGG - chr1_4:38205954-38205973 Msa0162030:CDS 35.0%
TATCAAGTGGTTAATTGGGT+GGG + chr1_4:38206163-38206182 None:intergenic 35.0%
TTATCAAGTGGTTAATTGGG+TGG + chr1_4:38206164-38206183 None:intergenic 35.0%
GGGTTATCAAGTGGTTAATT+GGG + chr1_4:38206167-38206186 None:intergenic 35.0%
TGGGTTATCAAGTGGTTAAT+TGG + chr1_4:38206168-38206187 None:intergenic 35.0%
CAGAATAAATAGGAAAGGGA+AGG + chr1_4:38206196-38206215 None:intergenic 35.0%
GAAACAGTCAAAAGTGACAT+TGG + chr1_4:38206318-38206337 None:intergenic 35.0%
TGATAAAGGAACAATACAGG+AGG + chr1_4:38206348-38206367 None:intergenic 35.0%
CTCTGATAAAGGAACAATAC+AGG + chr1_4:38206351-38206370 None:intergenic 35.0%
! ATGTGTTACAGCTCTGATAA+AGG + chr1_4:38206362-38206381 None:intergenic 35.0%
!! ATGAAAGATTGGGAAGTATC+GGG + chr1_4:38206434-38206453 None:intergenic 35.0%
!!! CGGTTTTCTAAGGTTGAATT+AGG + chr1_4:38206625-38206644 None:intergenic 35.0%
TTCATTGTGTTGGGTGTAAA+GGG + chr1_4:38206731-38206750 None:intergenic 35.0%
CTAACTCAACCTTATGAAAC+CGG - chr1_4:38206932-38206951 Msa0162030:intron 35.0%
ACTAAACTTGCCATATCTCT+AGG - chr1_4:38206987-38207006 Msa0162030:intron 35.0%
! TTCATTGCTTTGGGTTTAAG+GGG + chr1_4:38207032-38207051 None:intergenic 35.0%
! CTTCATTGCTTTGGGTTTAA+GGG + chr1_4:38207033-38207052 None:intergenic 35.0%
AAAACCCAAATGCCACAATT+AGG - chr1_4:38207075-38207094 Msa0162030:intron 35.0%
CAAGGACTAACAAGATATAG+TGG - chr1_4:38207137-38207156 Msa0162030:intron 35.0%
! GCCTCATTTTATTGACAAAC+AGG - chr1_4:38207295-38207314 Msa0162030:CDS 35.0%
GCCTGTTTGTCAATAAAATG+AGG + chr1_4:38207299-38207318 None:intergenic 35.0%
TTCAACTTTGCAAAGTAGAG+TGG - chr1_4:38207334-38207353 Msa0162030:CDS 35.0%
GTTCCAGACAAACAAAGATT+AGG + chr1_4:38207454-38207473 None:intergenic 35.0%
!! TTGTCTGGAACATTTTTCAC+AGG - chr1_4:38207463-38207482 Msa0162030:CDS 35.0%
ATAGAGAAAGTAAAGGAGGA+AGG - chr1_4:38207491-38207510 Msa0162030:CDS 35.0%
GAAGAATGTAATAGCTCGTT+CGG - chr1_4:38207945-38207964 Msa0162030:CDS 35.0%
GAGATCATAGAGTATGCAAT+TGG - chr1_4:38208002-38208021 Msa0162030:CDS 35.0%
!! CTCTAGGATTGAATAAGTCA+AGG - chr1_4:38208103-38208122 Msa0162030:five_prime_UTR 35.0%
AGTCTGTTAACATATGCTTG+AGG - chr1_4:38208126-38208145 Msa0162030:five_prime_UTR 35.0%
CCAAAGCTTGATACTAGTAG+TGG + chr1_4:38201338-38201357 None:intergenic 40.0%
CCACTACTAGTATCAAGCTT+TGG - chr1_4:38201335-38201354 Msa0162030:three_prime_UTR 40.0%
!!! CTCTGTTCTGTTCTGGTTTT+TGG + chr1_4:38201366-38201385 None:intergenic 40.0%
GTTCTTACTCTGTTCTGTTC+TGG + chr1_4:38201373-38201392 None:intergenic 40.0%
! AGAGTTTCTGCACTGATACA+TGG - chr1_4:38201674-38201693 Msa0162030:three_prime_UTR 40.0%
CTGATACATGGTTAAAACGC+TGG - chr1_4:38201686-38201705 Msa0162030:exon 40.0%
! TGATAATTTAAAACCCCGCG+TGG + chr1_4:38201736-38201755 None:intergenic 40.0%
!!! CGCGGGGTTTTAAATTATCA+AGG - chr1_4:38201736-38201755 Msa0162030:CDS 40.0%
AGTGATAGAAAAAGGGTCAG+TGG - chr1_4:38201903-38201922 Msa0162030:intron 40.0%
GGAATGTTGCCTAATACAAG+AGG - chr1_4:38201949-38201968 Msa0162030:intron 40.0%
ATGTTGCCTAATACAAGAGG+TGG - chr1_4:38201952-38201971 Msa0162030:intron 40.0%
TGTTGCCTAATACAAGAGGT+GGG - chr1_4:38201953-38201972 Msa0162030:intron 40.0%
GAAAACCCACCTCTTGTATT+AGG + chr1_4:38201961-38201980 None:intergenic 40.0%
CCATAACTTCCAATCCCAAA+TGG + chr1_4:38201994-38202013 None:intergenic 40.0%
! CCATTTGGGATTGGAAGTTA+TGG - chr1_4:38201991-38202010 Msa0162030:CDS 40.0%
TCAACTTCTTCATCCACTAC+TGG + chr1_4:38202057-38202076 None:intergenic 40.0%
TGGATGAAGAAGTTGAAGAG+AGG - chr1_4:38202061-38202080 Msa0162030:intron 40.0%
GAAGAGTAAGACTTCTATGG+CGG - chr1_4:38202098-38202117 Msa0162030:intron 40.0%
!! GGAAGACTTCTGAGATTGTT+AGG - chr1_4:38202244-38202263 Msa0162030:intron 40.0%
ATGCTGCACTTAACATGAAG+AGG - chr1_4:38202283-38202302 Msa0162030:intron 40.0%
GAAGAGGATGCATGAGATAT+TGG - chr1_4:38202299-38202318 Msa0162030:intron 40.0%
GAAAAACCTGTGCAACATAG+GGG - chr1_4:38202383-38202402 Msa0162030:intron 40.0%
!! ACAATTCGAGTTGGTCTATC+TGG + chr1_4:38202420-38202439 None:intergenic 40.0%
TTTCCGTGATTTAGTCGACA+AGG + chr1_4:38202475-38202494 None:intergenic 40.0%
! GAGGGTCTTATACTTAGGAA+CGG - chr1_4:38202688-38202707 Msa0162030:intron 40.0%
! GCCACAGTTATTGATAGTCA+AGG + chr1_4:38202853-38202872 None:intergenic 40.0%
TCAGAAAAAAACTGGTGGTC+TGG - chr1_4:38202902-38202921 Msa0162030:intron 40.0%
GAAGTTTCTATCAGCACCTT+CGG - chr1_4:38203031-38203050 Msa0162030:intron 40.0%
!! ACCTTCGGATGATTTTGAAG+TGG - chr1_4:38203046-38203065 Msa0162030:intron 40.0%
TCCACTTCAAAATCATCCGA+AGG + chr1_4:38203050-38203069 None:intergenic 40.0%
GACAAGTTATTGGATGGTCT+AGG - chr1_4:38203185-38203204 Msa0162030:intron 40.0%
TTCTCTACGAAGGATTGCTA+GGG - chr1_4:38203349-38203368 Msa0162030:intron 40.0%
TGCAGCCATGATCAAATTGT+GGG - chr1_4:38203505-38203524 Msa0162030:intron 40.0%
GCAAAAGTTGCACTAAAACG+TGG - chr1_4:38203542-38203561 Msa0162030:intron 40.0%
CTTCACTGTTCATGTATCCT+TGG - chr1_4:38203686-38203705 Msa0162030:CDS 40.0%
TACAAACTCACATAGCGTAC+TGG + chr1_4:38203824-38203843 None:intergenic 40.0%
GTTTGTAATTCGTAAGGGCT+AGG - chr1_4:38203837-38203856 Msa0162030:CDS 40.0%
CTACACAAAGCTAACTGCAA+AGG + chr1_4:38203985-38204004 None:intergenic 40.0%
!! CTTTGCAGTTAGCTTTGTGT+AGG - chr1_4:38203983-38204002 Msa0162030:intron 40.0%
!! GACTTCTTGGTCTTTTATCG+AGG - chr1_4:38204193-38204212 Msa0162030:CDS 40.0%
TTTGGATGCAGATGCTAAGT+GGG - chr1_4:38204384-38204403 Msa0162030:intron 40.0%
! GAATGTCTAGGGTCTATATG+AGG + chr1_4:38204619-38204638 None:intergenic 40.0%
!!! TTTTTTGAGGCCCATACCTT+GGG + chr1_4:38204701-38204720 None:intergenic 40.0%
!!! TTTTTTTGAGGCCCATACCT+TGG + chr1_4:38204702-38204721 None:intergenic 40.0%
AGAAGAAAAGGAAAGTCCGA+TGG + chr1_4:38204824-38204843 None:intergenic 40.0%
CAAGACAACAGAAGAGGAAA+AGG + chr1_4:38204862-38204881 None:intergenic 40.0%
! GAATCGAGTCATCTTGCTTT+TGG - chr1_4:38204896-38204915 Msa0162030:intron 40.0%
!!! GTCATCTTGCTTTTGGTGTT+AGG - chr1_4:38204903-38204922 Msa0162030:intron 40.0%
!!! ATCTTGCTTTTGGTGTTAGG+CGG - chr1_4:38204906-38204925 Msa0162030:intron 40.0%
CACAATGTTAGTGGTACTTG+AGG - chr1_4:38205129-38205148 Msa0162030:CDS 40.0%
! TTGGTGCCTAATTTCACTCT+AGG - chr1_4:38205177-38205196 Msa0162030:CDS 40.0%
ACCAGGCTGAAAGAAAGATA+AGG - chr1_4:38205252-38205271 Msa0162030:CDS 40.0%
TCCTTATCTTTCTTTCAGCC+TGG + chr1_4:38205256-38205275 None:intergenic 40.0%
AGTGGTGAAGTGAATCAAAG+TGG + chr1_4:38205461-38205480 None:intergenic 40.0%
! ATTCACTTCACCACTTGCTA+AGG - chr1_4:38205466-38205485 Msa0162030:intron 40.0%
! TTCACTTCACCACTTGCTAA+GGG - chr1_4:38205467-38205486 Msa0162030:intron 40.0%
TGAATGTAATTCGTGGTTGC+AGG - chr1_4:38205578-38205597 Msa0162030:intron 40.0%
CAATTATCTTGACCAGTTCC+CGG + chr1_4:38205658-38205677 None:intergenic 40.0%
TATACTTGTTTACCGGGGAA+AGG - chr1_4:38205781-38205800 Msa0162030:intron 40.0%
CTTGACAAAGAGAAAGGCTT+TGG - chr1_4:38205841-38205860 Msa0162030:intron 40.0%
CAGAATGCAACAAATTGGAG+TGG + chr1_4:38205946-38205965 None:intergenic 40.0%
! GACTTTTATCGAGTGATCTC+TGG - chr1_4:38206008-38206027 Msa0162030:CDS 40.0%
AACTAGGAATTGCAAGGTCA+CGG - chr1_4:38206106-38206125 Msa0162030:intron 40.0%
AAAGGAACAATACAGGAGGA+GGG + chr1_4:38206344-38206363 None:intergenic 40.0%
TAAAGGAACAATACAGGAGG+AGG + chr1_4:38206345-38206364 None:intergenic 40.0%
!! TGAAAGATTGGGAAGTATCG+GGG + chr1_4:38206433-38206452 None:intergenic 40.0%
!! TTTGGCTTAGTTTGTTGTGG+TGG - chr1_4:38206481-38206500 Msa0162030:CDS 40.0%
!! TTGGCTTAGTTTGTTGTGGT+GGG - chr1_4:38206482-38206501 Msa0162030:CDS 40.0%
TCATTGTGTTGGGTGTAAAG+GGG + chr1_4:38206730-38206749 None:intergenic 40.0%
CTTCATTGTGTTGGGTGTAA+AGG + chr1_4:38206732-38206751 None:intergenic 40.0%
CTTTACACCCAACACAATGA+AGG - chr1_4:38206730-38206749 Msa0162030:intron 40.0%
TCCAACACCTTCATTGTGTT+GGG + chr1_4:38206740-38206759 None:intergenic 40.0%
! CCTTCATTGCTTTGGGTTTA+AGG + chr1_4:38207034-38207053 None:intergenic 40.0%
CCTTAAACCCAAAGCAATGA+AGG - chr1_4:38207031-38207050 Msa0162030:intron 40.0%
TCCAACACCTTCATTGCTTT+GGG + chr1_4:38207041-38207060 None:intergenic 40.0%
TGGAAATTCCGCTTTCATTG+CGG + chr1_4:38207116-38207135 None:intergenic 40.0%
TGAAAGCGGAATTTCCAACA+AGG - chr1_4:38207119-38207138 Msa0162030:intron 40.0%
TACAGATGATGCTAACTCTG+AGG - chr1_4:38207553-38207572 Msa0162030:CDS 40.0%
ATACTTGTATATGTAGGCGG+AGG - chr1_4:38207718-38207737 Msa0162030:CDS 40.0%
! TTTTGTGAGGCAAATTCCTC+AGG + chr1_4:38207830-38207849 None:intergenic 40.0%
CCTCACAAAATTGAAGGTCA+GGG - chr1_4:38207840-38207859 Msa0162030:CDS 40.0%
CTCACAAAATTGAAGGTCAG+GGG - chr1_4:38207841-38207860 Msa0162030:CDS 40.0%
AGCAGTGACACTCAATTCAT+TGG - chr1_4:38207906-38207925 Msa0162030:CDS 40.0%
CGGAGAGGATGATGAAAGTT+AGG + chr1_4:38201544-38201563 None:intergenic 45.0%
ATTGTGGTGAAGAAACGGAG+AGG + chr1_4:38201559-38201578 None:intergenic 45.0%
! TAATTTAAAACCCCGCGTGG+CGG + chr1_4:38201733-38201752 None:intergenic 45.0%
GATAGAAAAAGGGTCAGTGG+AGG - chr1_4:38201906-38201925 Msa0162030:intron 45.0%
! TTTTCGCCGGAATCACCATT+TGG - chr1_4:38201976-38201995 Msa0162030:intron 45.0%
TTTCGCCGGAATCACCATTT+GGG - chr1_4:38201977-38201996 Msa0162030:intron 45.0%
CCAATCCCAAATGGTGATTC+CGG + chr1_4:38201985-38202004 None:intergenic 45.0%
GGGATTGGAAGTTATGGAAG+TGG - chr1_4:38201997-38202016 Msa0162030:CDS 45.0%
GGAAGTTATGGAAGTGGTGA+TGG - chr1_4:38202003-38202022 Msa0162030:CDS 45.0%
!! AGTTATGGAAGTGGTGATGG+TGG - chr1_4:38202006-38202025 Msa0162030:CDS 45.0%
TGGTGAAGTGAGGTTTCCTT+GGG - chr1_4:38202026-38202045 Msa0162030:CDS 45.0%
CTCTTCCTGAGTCTGAATTG+AGG - chr1_4:38202127-38202146 Msa0162030:intron 45.0%
TTCCTGAGTCTGAATTGAGG+AGG - chr1_4:38202130-38202149 Msa0162030:intron 45.0%
AACCTCCTCAATTCAGACTC+AGG + chr1_4:38202135-38202154 None:intergenic 45.0%
AAGCATAAGACGAGAATCGG+TGG - chr1_4:38202177-38202196 Msa0162030:CDS 45.0%
GAGGATGCATGAGATATTGG+AGG - chr1_4:38202302-38202321 Msa0162030:intron 45.0%
ATGAATCCCCTATGTTGCAC+AGG + chr1_4:38202392-38202411 None:intergenic 45.0%
! GGTCCTTGTCGACTAAATCA+CGG - chr1_4:38202469-38202488 Msa0162030:intron 45.0%
! GGTTCAGGGGTATGTTTGTA+AGG - chr1_4:38202603-38202622 Msa0162030:intron 45.0%
AGAGACAGACATTTCTCACG+AGG - chr1_4:38202669-38202688 Msa0162030:intron 45.0%
GAGACAGACATTTCTCACGA+GGG - chr1_4:38202670-38202689 Msa0162030:intron 45.0%
! CTCACGAGGGTCTTATACTT+AGG - chr1_4:38202683-38202702 Msa0162030:intron 45.0%
! GGTCTTATACTTAGGAACGG+AGG - chr1_4:38202691-38202710 Msa0162030:intron 45.0%
AAACTGGTGGTCTGGTGATT+TGG - chr1_4:38202910-38202929 Msa0162030:intron 45.0%
GTAGCTCACACCTCTGTATA+AGG + chr1_4:38202955-38202974 None:intergenic 45.0%
! ATACAGAGGTGTGAGCTACA+AGG - chr1_4:38202956-38202975 Msa0162030:intron 45.0%
CCAGGCCAATCTGTATATCT+AGG + chr1_4:38203212-38203231 None:intergenic 45.0%
! CCTAGATATACAGATTGGCC+TGG - chr1_4:38203209-38203228 Msa0162030:intron 45.0%
! AAAGGAAGAACTCTGAAGGG+AGG + chr1_4:38203293-38203312 None:intergenic 45.0%
CCGAAAGGAAGAACTCTGAA+GGG + chr1_4:38203296-38203315 None:intergenic 45.0%
CCCTTCAGAGTTCTTCCTTT+CGG - chr1_4:38203293-38203312 Msa0162030:intron 45.0%
TCCGAAAGGAAGAACTCTGA+AGG + chr1_4:38203297-38203316 None:intergenic 45.0%
CTTCTCTACGAAGGATTGCT+AGG - chr1_4:38203348-38203367 Msa0162030:intron 45.0%
TCTCTACGAAGGATTGCTAG+GGG - chr1_4:38203350-38203369 Msa0162030:intron 45.0%
! CTCCCTCCACATTTTGCATT+AGG - chr1_4:38203374-38203393 Msa0162030:intron 45.0%
CTGCAGCCATGATCAAATTG+TGG - chr1_4:38203504-38203523 Msa0162030:intron 45.0%
GAGAATGGCAGAAGAGATCA+AGG - chr1_4:38203586-38203605 Msa0162030:intron 45.0%
GGTGATTTATCACGTTCTCC+CGG - chr1_4:38203607-38203626 Msa0162030:intron 45.0%
CTTTAGCGAATGGCATACCA+AGG + chr1_4:38203706-38203725 None:intergenic 45.0%
GTTTGTAGGCAGCCATTAAG+TGG - chr1_4:38203775-38203794 Msa0162030:CDS 45.0%
!! GCAGTTAGCTTTGTGTAGGA+TGG - chr1_4:38203987-38204006 Msa0162030:intron 45.0%
TACCGGATGCAGAAATTGAC+AGG - chr1_4:38204145-38204164 Msa0162030:CDS 45.0%
CACCTGTCAATTTCTGCATC+CGG + chr1_4:38204150-38204169 None:intergenic 45.0%
CATTCTTTCCCTCTCTAGCA+AGG + chr1_4:38204251-38204270 None:intergenic 45.0%
CTTGCTAGAGAGGGAAAGAA+TGG - chr1_4:38204249-38204268 Msa0162030:CDS 45.0%
AAGAATGGCCAAAGCAATGC+AGG - chr1_4:38204264-38204283 Msa0162030:CDS 45.0%
CTTTGGATGCAGATGCTAAG+TGG - chr1_4:38204383-38204402 Msa0162030:intron 45.0%
TTGGATGCAGATGCTAAGTG+GGG - chr1_4:38204385-38204404 Msa0162030:intron 45.0%
TGCTAAGTGGGGAAAGACAT+TGG - chr1_4:38204396-38204415 Msa0162030:intron 45.0%
!!! TTTTTGAGGCCCATACCTTG+GGG + chr1_4:38204700-38204719 None:intergenic 45.0%
TTCCATCACCATCACTCCAT+CGG - chr1_4:38204805-38204824 Msa0162030:intron 45.0%
!!! TCTTGCTTTTGGTGTTAGGC+GGG - chr1_4:38204907-38204926 Msa0162030:intron 45.0%
CCTGGTCAGCAAAAAATCCA+GGG + chr1_4:38205238-38205257 None:intergenic 45.0%
! GGTAGACGTGGAGTTTTTGA+CGG - chr1_4:38205599-38205618 Msa0162030:intron 45.0%
AATCGAGCTTCAACGACATG+AGG - chr1_4:38205871-38205890 Msa0162030:intron 45.0%
TGCAGGAACTAGGAATTGCA+AGG - chr1_4:38206100-38206119 Msa0162030:intron 45.0%
! CTACCAAGTCTTTGAGAGCT+TGG - chr1_4:38206131-38206150 Msa0162030:intron 45.0%
GAACCAAGCTCTCAAAGACT+TGG + chr1_4:38206137-38206156 None:intergenic 45.0%
GACATTGGTCAGTTACTGCA+GGG + chr1_4:38206303-38206322 None:intergenic 45.0%
TGACATTGGTCAGTTACTGC+AGG + chr1_4:38206304-38206323 None:intergenic 45.0%
AAGGAACAATACAGGAGGAG+GGG + chr1_4:38206343-38206362 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTCTA+AGG + chr1_4:38206635-38206654 None:intergenic 45.0%
!! CCTTAGAAAACCGGCTTGTA+AGG - chr1_4:38206632-38206651 Msa0162030:intron 45.0%
!! AAAACCGGCTTGTAAGGTGA+GGG - chr1_4:38206638-38206657 Msa0162030:intron 45.0%
! ACCCAACACAATGAAGGTGT+TGG - chr1_4:38206736-38206755 Msa0162030:intron 45.0%
CTCCAACACCTTCATTGTGT+TGG + chr1_4:38206741-38206760 None:intergenic 45.0%
! GGTGTTGGAGATTGCAATGA+TGG - chr1_4:38206751-38206770 Msa0162030:intron 45.0%
CAGCCCAAATGCCACAATTA+GGG - chr1_4:38206774-38206793 Msa0162030:intron 45.0%
AGCCCAAATGCCACAATTAG+GGG - chr1_4:38206775-38206794 Msa0162030:intron 45.0%
ATTGGGTCTCAAGTGTGAGA+GGG + chr1_4:38206840-38206859 None:intergenic 45.0%
AAGAATCTGTCCTACGTCTG+TGG + chr1_4:38206896-38206915 None:intergenic 45.0%
! CCTTACAAGCCGGTTTCATA+AGG + chr1_4:38206944-38206963 None:intergenic 45.0%
!! CCTTATGAAACCGGCTTGTA+AGG - chr1_4:38206941-38206960 Msa0162030:intron 45.0%
!! TATGAAACCGGCTTGTAAGG+TGG - chr1_4:38206944-38206963 Msa0162030:intron 45.0%
!! ATGAAACCGGCTTGTAAGGT+GGG - chr1_4:38206945-38206964 Msa0162030:intron 45.0%
TGCCATATCTCTAGGCAACA+TGG - chr1_4:38206995-38207014 Msa0162030:intron 45.0%
GCCATATCTCTAGGCAACAT+GGG - chr1_4:38206996-38207015 Msa0162030:intron 45.0%
TCCCATGTTGCCTAGAGATA+TGG + chr1_4:38207000-38207019 None:intergenic 45.0%
! ATTGCTTTGGGTTTAAGGGG+TGG + chr1_4:38207029-38207048 None:intergenic 45.0%
! ACCCAAAGCAATGAAGGTGT+TGG - chr1_4:38207037-38207056 Msa0162030:intron 45.0%
CTCCAACACCTTCATTGCTT+TGG + chr1_4:38207042-38207061 None:intergenic 45.0%
!! CAAAGCAATGAAGGTGTTGG+AGG - chr1_4:38207040-38207059 Msa0162030:intron 45.0%
! GGTGTTGGAGGTTACAATGA+AGG - chr1_4:38207052-38207071 Msa0162030:intron 45.0%
GGTGCCTAATTGTGGCATTT+GGG + chr1_4:38207082-38207101 None:intergenic 45.0%
AGGTGCCTAATTGTGGCATT+TGG + chr1_4:38207083-38207102 None:intergenic 45.0%
AATGCCACAATTAGGCACCT+AGG - chr1_4:38207083-38207102 Msa0162030:intron 45.0%
ATGCCACAATTAGGCACCTA+GGG - chr1_4:38207084-38207103 Msa0162030:intron 45.0%
GGATGATGAGGAAGAAGTTG+AGG - chr1_4:38207739-38207758 Msa0162030:CDS 45.0%
GCCTCACAAAATTGAAGGTC+AGG - chr1_4:38207839-38207858 Msa0162030:CDS 45.0%
! CCCTGACCTTCAATTTTGTG+AGG + chr1_4:38207843-38207862 None:intergenic 45.0%
CTGCTATTGACGATCCACAT+AGG + chr1_4:38207891-38207910 None:intergenic 45.0%
AATGGGTGAAGTTGGCGAGT+GGG + chr1_4:38201511-38201530 None:intergenic 50.0%
AAATGGGTGAAGTTGGCGAG+TGG + chr1_4:38201512-38201531 None:intergenic 50.0%
! AGCTCTGATGATGAGGGTGA+TGG - chr1_4:38201796-38201815 Msa0162030:CDS 50.0%
! TCTGATGATGAGGGTGATGG+TGG - chr1_4:38201799-38201818 Msa0162030:CDS 50.0%
!! GGGTGATGGTGGTAGTAGAA+TGG - chr1_4:38201810-38201829 Msa0162030:intron 50.0%
!! TACAAGAGGTGGGTTTTCGC+CGG - chr1_4:38201963-38201982 Msa0162030:intron 50.0%
! CCGGAATCACCATTTGGGAT+TGG - chr1_4:38201982-38202001 Msa0162030:CDS 50.0%
GTGGTGAAGTGAGGTTTCCT+TGG - chr1_4:38202025-38202044 Msa0162030:CDS 50.0%
TCCTTGGGAGAAACCAGTAG+TGG - chr1_4:38202041-38202060 Msa0162030:CDS 50.0%
!! TCCACTACTGGTTTCTCCCA+AGG + chr1_4:38202045-38202064 None:intergenic 50.0%
TTGAAGAGAGGACGAGTTCG+CGG - chr1_4:38202073-38202092 Msa0162030:intron 50.0%
CATAAGACGAGAATCGGTGG+TGG - chr1_4:38202180-38202199 Msa0162030:CDS 50.0%
ATGCTTCCTCCAACTGTTCC+TGG - chr1_4:38203260-38203279 Msa0162030:intron 50.0%
TGGTAACCAGGAACAGTTGG+AGG + chr1_4:38203269-38203288 None:intergenic 50.0%
!! GGTTGGTAACCAGGAACAGT+TGG + chr1_4:38203272-38203291 None:intergenic 50.0%
! GAAGAACTCTGAAGGGAGGT+TGG + chr1_4:38203289-38203308 None:intergenic 50.0%
GAGACCGACACTTGGTTTCA+AGG - chr1_4:38203319-38203338 Msa0162030:intron 50.0%
ACCGACACTTGGTTTCAAGG+AGG - chr1_4:38203322-38203341 Msa0162030:intron 50.0%
GCCTCCTTGAAACCAAGTGT+CGG + chr1_4:38203326-38203345 None:intergenic 50.0%
AGGAGGCAACTTCTCTACGA+AGG - chr1_4:38203339-38203358 Msa0162030:intron 50.0%
GGTAGAAACAGGCAGCTTCA+AGG - chr1_4:38203476-38203495 Msa0162030:intron 50.0%
GCTAACTACCAGCGAGAGAA+TGG - chr1_4:38203571-38203590 Msa0162030:intron 50.0%
CGGATGCAGAAATTGACAGG+TGG - chr1_4:38204148-38204167 Msa0162030:CDS 50.0%
AGCAAGGCTTGAGTGACATC+TGG + chr1_4:38204235-38204254 None:intergenic 50.0%
TCACTCAAGCCTTGCTAGAG+AGG - chr1_4:38204239-38204258 Msa0162030:CDS 50.0%
CACTCAAGCCTTGCTAGAGA+GGG - chr1_4:38204240-38204259 Msa0162030:CDS 50.0%
CTCCTCATCCTGCATTGCTT+TGG + chr1_4:38204275-38204294 None:intergenic 50.0%
CAAAGCAATGCAGGATGAGG+AGG - chr1_4:38204273-38204292 Msa0162030:CDS 50.0%
TACATCAGAGTTGTCAGCGG+AGG - chr1_4:38204342-38204361 Msa0162030:intron 50.0%
TGGGACTCTTGGCGAAACTT+TGG - chr1_4:38204366-38204385 Msa0162030:intron 50.0%
GGATGAGCGTCATGAGCAAA+AGG - chr1_4:38204417-38204436 Msa0162030:intron 50.0%
! TTTTAAACAGGGCCGGACCT+TGG - chr1_4:38204643-38204662 Msa0162030:intron 50.0%
TTTAAACAGGGCCGGACCTT+GGG - chr1_4:38204644-38204663 Msa0162030:intron 50.0%
TGCAAGGAGCTCAATGGAAC+CGG - chr1_4:38204670-38204689 Msa0162030:intron 50.0%
AGGAAAGTCCGATGGAGTGA+TGG + chr1_4:38204816-38204835 None:intergenic 50.0%
! GTGTTAGGCGGGTGTCTTTT+GGG - chr1_4:38204918-38204937 Msa0162030:intron 50.0%
!! TCTTTTGGGAGGGTGGTTTG+AGG - chr1_4:38204932-38204951 Msa0162030:intron 50.0%
TTCCTACGAATTCGGAGGGT+CGG + chr1_4:38205082-38205101 None:intergenic 50.0%
ACCCTCCGAATTCGTAGGAA+TGG - chr1_4:38205082-38205101 Msa0162030:CDS 50.0%
GCCATTCCTACGAATTCGGA+GGG + chr1_4:38205086-38205105 None:intergenic 50.0%
CAGGGCCATTCCTACGAATT+CGG + chr1_4:38205090-38205109 None:intergenic 50.0%
!!! CCCTGGATTTTTTGCTGACC+AGG - chr1_4:38205235-38205254 Msa0162030:CDS 50.0%
GCCTGGTCAGCAAAAAATCC+AGG + chr1_4:38205239-38205258 None:intergenic 50.0%
AGCTGAAAGAGCCCTAACGA+AGG - chr1_4:38205277-38205296 Msa0162030:CDS 50.0%
TGAAAGAGCCCTAACGAAGG+TGG - chr1_4:38205280-38205299 Msa0162030:CDS 50.0%
AGACACCTCCACCTTCGTTA+GGG + chr1_4:38205291-38205310 None:intergenic 50.0%
AAGACACCTCCACCTTCGTT+AGG + chr1_4:38205292-38205311 None:intergenic 50.0%
! GGGTCTGCTCTGTTTTCTGA+TGG + chr1_4:38205320-38205339 None:intergenic 50.0%
! ACTTCACCACTTGCTAAGGG+TGG - chr1_4:38205470-38205489 Msa0162030:intron 50.0%
! CTTCACCACTTGCTAAGGGT+GGG - chr1_4:38205471-38205490 Msa0162030:intron 50.0%
TTCATCCCACCCTTAGCAAG+TGG + chr1_4:38205479-38205498 None:intergenic 50.0%
TCGAGAACATGCACTTGCAC+TGG - chr1_4:38205627-38205646 Msa0162030:intron 50.0%
! TGCACTTGCACTGGAAGTAC+CGG - chr1_4:38205636-38205655 Msa0162030:intron 50.0%
CTAGCACTTGAAGCTGAGAG+TGG - chr1_4:38205716-38205735 Msa0162030:intron 50.0%
!! AGGCAGAGTGGGTTATCAAG+TGG + chr1_4:38206176-38206195 None:intergenic 50.0%
TAGGAAAGGGAAGGCAGAGT+GGG + chr1_4:38206187-38206206 None:intergenic 50.0%
ATAGGAAAGGGAAGGCAGAG+TGG + chr1_4:38206188-38206207 None:intergenic 50.0%
!! GAAAACCGGCTTGTAAGGTG+AGG - chr1_4:38206637-38206656 Msa0162030:intron 50.0%
! TGGGTGTAAAGGGGTGGATT+TGG + chr1_4:38206721-38206740 None:intergenic 50.0%
TTGTGTTGGGTGTAAAGGGG+TGG + chr1_4:38206727-38206746 None:intergenic 50.0%
GCAGCCCAAATGCCACAATT+AGG - chr1_4:38206773-38206792 Msa0162030:intron 50.0%
GCCCAAATGCCACAATTAGG+GGG - chr1_4:38206776-38206795 Msa0162030:intron 50.0%
GCCCCCTAATTGTGGCATTT+GGG + chr1_4:38206780-38206799 None:intergenic 50.0%
AGCCCCCTAATTGTGGCATT+TGG + chr1_4:38206781-38206800 None:intergenic 50.0%
ATGCCACAATTAGGGGGCTA+CGG - chr1_4:38206782-38206801 Msa0162030:intron 50.0%
TTGGGTCTCAAGTGTGAGAG+GGG + chr1_4:38206839-38206858 None:intergenic 50.0%
CATTGGGTCTCAAGTGTGAG+AGG + chr1_4:38206841-38206860 None:intergenic 50.0%
GTCCATGTGTCAGGCTCATT+GGG + chr1_4:38206857-38206876 None:intergenic 50.0%
TCTGTCCTACGTCTGTGGTT+CGG + chr1_4:38206891-38206910 None:intergenic 50.0%
TGCCACAATTAGGCACCTAG+GGG - chr1_4:38207085-38207104 Msa0162030:intron 50.0%
TATGTAGGCGGAGGATGATG+AGG - chr1_4:38207727-38207746 Msa0162030:CDS 50.0%
GTGAGGCAAATTCCTCAGGT+TGG + chr1_4:38207826-38207845 None:intergenic 50.0%
TTGACGATCCACATAGGCGT+CGG + chr1_4:38207885-38207904 None:intergenic 50.0%
!! GTGGTGATGGTGGTGAAGTG+AGG - chr1_4:38202016-38202035 Msa0162030:CDS 55.0%
! AAGACGAGAATCGGTGGTGG+TGG - chr1_4:38202183-38202202 Msa0162030:CDS 55.0%
! CTGGTGGTCTGGTGATTTGG+AGG - chr1_4:38202913-38202932 Msa0162030:intron 55.0%
! GGTCTGGTGATTTGGAGGTC+TGG - chr1_4:38202918-38202937 Msa0162030:intron 55.0%
! ATATCCGCATCGACAGGCAG+TGG + chr1_4:38203242-38203261 None:intergenic 55.0%
! GGAAGCATATCCGCATCGAC+AGG + chr1_4:38203248-38203267 None:intergenic 55.0%
!! CTGAAGGGAGGTTGGTAACC+AGG + chr1_4:38203281-38203300 None:intergenic 55.0%
!! AGTGTCGGTCTCACTCCGAA+AGG + chr1_4:38203311-38203330 None:intergenic 55.0%
TTCGGAGTGAGACCGACACT+TGG - chr1_4:38203311-38203330 Msa0162030:intron 55.0%
CTCTTCTGCCATTCTCTCGC+TGG + chr1_4:38203582-38203601 None:intergenic 55.0%
GGCCAAAGCAATGCAGGATG+AGG - chr1_4:38204270-38204289 Msa0162030:CDS 55.0%
TTAAACAGGGCCGGACCTTG+GGG - chr1_4:38204645-38204664 Msa0162030:intron 55.0%
GCAAGGAGCTCAATGGAACC+GGG - chr1_4:38204671-38204690 Msa0162030:intron 55.0%
!! AGTGATGGTGATGGAACGCG+TGG + chr1_4:38204801-38204820 None:intergenic 55.0%
! GTCCGATGGAGTGATGGTGA+TGG + chr1_4:38204810-38204829 None:intergenic 55.0%
! GGTGTTAGGCGGGTGTCTTT+TGG - chr1_4:38204917-38204936 Msa0162030:intron 55.0%
! TTAGGCGGGTGTCTTTTGGG+AGG - chr1_4:38204921-38204940 Msa0162030:intron 55.0%
!! TAGGCGGGTGTCTTTTGGGA+GGG - chr1_4:38204922-38204941 Msa0162030:intron 55.0%
AACCGACCCTCCGAATTCGT+AGG - chr1_4:38205077-38205096 Msa0162030:CDS 55.0%
GGCCATTCCTACGAATTCGG+AGG + chr1_4:38205087-38205106 None:intergenic 55.0%
AAGAGCCCTAACGAAGGTGG+AGG - chr1_4:38205283-38205302 Msa0162030:CDS 55.0%
TTCGTGGTTGCAGGTAGACG+TGG - chr1_4:38205587-38205606 Msa0162030:intron 55.0%
!! GCACTTGCACTGGAAGTACC+GGG - chr1_4:38205637-38205656 Msa0162030:intron 55.0%
GCACTTGAAGCTGAGAGTGG+TGG - chr1_4:38205719-38205738 Msa0162030:intron 55.0%
! AGCTGAGAGTGGTGGTGTTC+TGG - chr1_4:38205727-38205746 Msa0162030:intron 55.0%
! GTCTCATCATTGAAGGGCGC+TGG + chr1_4:38205811-38205830 None:intergenic 55.0%
GGAACATTGTGCAGCAGTGC+AGG - chr1_4:38206083-38206102 Msa0162030:intron 55.0%
TGTGCAGCAGTGCAGGAACT+AGG - chr1_4:38206090-38206109 Msa0162030:intron 55.0%
! TCAAGTGTGAGAGGGGGTGT+TGG + chr1_4:38206832-38206851 None:intergenic 55.0%
TGGGTCTCAAGTGTGAGAGG+GGG + chr1_4:38206838-38206857 None:intergenic 55.0%
GACCCAATGAGCCTGACACA+TGG - chr1_4:38206852-38206871 Msa0162030:intron 55.0%
CGTCCATGTGTCAGGCTCAT+TGG + chr1_4:38206858-38206877 None:intergenic 55.0%
GCCACAATTAGGCACCTAGG+GGG - chr1_4:38207086-38207105 Msa0162030:intron 55.0%
ACCCCCTAGGTGCCTAATTG+TGG + chr1_4:38207090-38207109 None:intergenic 55.0%
ACAATTAGGCACCTAGGGGG+TGG - chr1_4:38207089-38207108 Msa0162030:intron 55.0%
! GGTCAGGGGTCGTGATTTTG+TGG - chr1_4:38207855-38207874 Msa0162030:CDS 55.0%
TGACGATCCACATAGGCGTC+GGG + chr1_4:38207884-38207903 None:intergenic 55.0%
AATCGCCCAAAACCGCCACG+CGG - chr1_4:38201718-38201737 Msa0162030:CDS 60.0%
! AAACCCCGCGTGGCGGTTTT+GGG + chr1_4:38201726-38201745 None:intergenic 60.0%
! AAAACCCCGCGTGGCGGTTT+TGG + chr1_4:38201727-38201746 None:intergenic 60.0%
ACAGGCAGTGGCTCACATCC+AGG + chr1_4:38203230-38203249 None:intergenic 60.0%
TGAGCCACTGCCTGTCGATG+CGG - chr1_4:38203235-38203254 Msa0162030:intron 60.0%
TCAGAGTTGTCAGCGGAGGC+TGG - chr1_4:38204346-38204365 Msa0162030:intron 60.0%
CAGAGTTGTCAGCGGAGGCT+GGG - chr1_4:38204347-38204366 Msa0162030:intron 60.0%
TCCTTGCACACCCCAAGGTC+CGG + chr1_4:38204658-38204677 None:intergenic 60.0%
TGAGCTCCTTGCACACCCCA+AGG + chr1_4:38204663-38204682 None:intergenic 60.0%
GGGGTGTGCAAGGAGCTCAA+TGG - chr1_4:38204664-38204683 Msa0162030:intron 60.0%
TTGAGGCCCATACCTTGGGG+AGG + chr1_4:38204697-38204716 None:intergenic 60.0%
!! GCACTGGAAGTACCGGGAAC+TGG - chr1_4:38205643-38205662 Msa0162030:intron 60.0%
!! GGCGCTGGTAATCCTTTCCC+CGG + chr1_4:38205796-38205815 None:intergenic 60.0%
GCAGCCCTCACCTTACAAGC+CGG + chr1_4:38206645-38206664 None:intergenic 60.0%
CCACAATTAGGGGGCTACGG+CGG - chr1_4:38206785-38206804 Msa0162030:intron 60.0%
AGCCTGACACATGGACGACG+CGG - chr1_4:38206861-38206880 Msa0162030:intron 60.0%
GCAAGCCGAACCACAGACGT+AGG - chr1_4:38206883-38206902 Msa0162030:intron 60.0%
TTCATTGCGGTCCACCCCCT+AGG + chr1_4:38207103-38207122 None:intergenic 60.0%
GGGGTGGACCGCAATGAAAG+CGG - chr1_4:38207105-38207124 Msa0162030:intron 60.0%
GTGGATTCCCGACGCCTATG+TGG - chr1_4:38207874-38207893 Msa0162030:CDS 60.0%
ATCGCCCAAAACCGCCACGC+GGG - chr1_4:38201719-38201738 Msa0162030:CDS 65.0%
TCAGCGGAGGCTGGGACTCT+TGG - chr1_4:38204355-38204374 Msa0162030:intron 65.0%
AATGGAACCGGGCCTCCCCA+AGG - chr1_4:38204682-38204701 Msa0162030:intron 65.0%
AACCGGGCCTCCCCAAGGTA+TGG - chr1_4:38204687-38204706 Msa0162030:intron 65.0%
ACCGGGCCTCCCCAAGGTAT+GGG - chr1_4:38204688-38204707 Msa0162030:intron 65.0%
!! GCGGGTGTCTTTTGGGAGGG+TGG - chr1_4:38204925-38204944 Msa0162030:intron 65.0%
CCGCCGTAGCCCCCTAATTG+TGG + chr1_4:38206788-38206807 None:intergenic 65.0%
TGCCGCGTCGTCCATGTGTC+AGG + chr1_4:38206866-38206885 None:intergenic 65.0%
GGGCAGCCCACCTTACAAGC+CGG + chr1_4:38206954-38206973 None:intergenic 65.0%
TCGCCCAAAACCGCCACGCG+GGG - chr1_4:38201720-38201739 Msa0162030:CDS 70.0%
GCCGGACCTTGGGGTGTGCA+AGG - chr1_4:38204654-38204673 Msa0162030:intron 70.0%
GCCCATACCTTGGGGAGGCC+CGG + chr1_4:38204692-38204711 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 38201312 38208241 38201312 ID=Msa0162030;Name=Msa0162030
chr1_4 mRNA 38201312 38208241 38201312 ID=Msa0162030-mRNA-1;Parent=Msa0162030;Name=Msa0162030-mRNA-1;_AED=0.06;_eAED=0.06;_QI=184|1|1|1|0.88|0.8|10|368|839
chr1_4 exon 38201312 38201548 38201312 ID=Msa0162030-mRNA-1:exon:11219;Parent=Msa0162030-mRNA-1
chr1_4 exon 38201569 38201819 38201569 ID=Msa0162030-mRNA-1:exon:11218;Parent=Msa0162030-mRNA-1
chr1_4 exon 38201979 38202068 38201979 ID=Msa0162030-mRNA-1:exon:11217;Parent=Msa0162030-mRNA-1
chr1_4 exon 38202177 38202236 38202177 ID=Msa0162030-mRNA-1:exon:11216;Parent=Msa0162030-mRNA-1
chr1_4 exon 38203661 38203953 38203661 ID=Msa0162030-mRNA-1:exon:11215;Parent=Msa0162030-mRNA-1
chr1_4 exon 38204140 38204296 38204140 ID=Msa0162030-mRNA-1:exon:11214;Parent=Msa0162030-mRNA-1
chr1_4 exon 38205046 38205396 38205046 ID=Msa0162030-mRNA-1:exon:11213;Parent=Msa0162030-mRNA-1
chr1_4 exon 38205946 38206076 38205946 ID=Msa0162030-mRNA-1:exon:11212;Parent=Msa0162030-mRNA-1
chr1_4 exon 38206158 38206647 38206158 ID=Msa0162030-mRNA-1:exon:11211;Parent=Msa0162030-mRNA-1
chr1_4 exon 38207230 38208241 38207230 ID=Msa0162030-mRNA-1:exon:11210;Parent=Msa0162030-mRNA-1
chr1_4 five_prime_UTR 38208058 38208241 38208058 ID=Msa0162030-mRNA-1:five_prime_utr;Parent=Msa0162030-mRNA-1
chr1_4 CDS 38207230 38208057 38207230 ID=Msa0162030-mRNA-1:cds;Parent=Msa0162030-mRNA-1
chr1_4 CDS 38206158 38206647 38206158 ID=Msa0162030-mRNA-1:cds;Parent=Msa0162030-mRNA-1
chr1_4 CDS 38205946 38206076 38205946 ID=Msa0162030-mRNA-1:cds;Parent=Msa0162030-mRNA-1
chr1_4 CDS 38205046 38205396 38205046 ID=Msa0162030-mRNA-1:cds;Parent=Msa0162030-mRNA-1
chr1_4 CDS 38204140 38204296 38204140 ID=Msa0162030-mRNA-1:cds;Parent=Msa0162030-mRNA-1
chr1_4 CDS 38203661 38203953 38203661 ID=Msa0162030-mRNA-1:cds;Parent=Msa0162030-mRNA-1
chr1_4 CDS 38202177 38202236 38202177 ID=Msa0162030-mRNA-1:cds;Parent=Msa0162030-mRNA-1
chr1_4 CDS 38201979 38202068 38201979 ID=Msa0162030-mRNA-1:cds;Parent=Msa0162030-mRNA-1
chr1_4 CDS 38201700 38201819 38201700 ID=Msa0162030-mRNA-1:cds;Parent=Msa0162030-mRNA-1
chr1_4 three_prime_UTR 38201569 38201699 38201569 ID=Msa0162030-mRNA-1:three_prime_utr;Parent=Msa0162030-mRNA-1
chr1_4 three_prime_UTR 38201312 38201548 38201312 ID=Msa0162030-mRNA-1:three_prime_utr;Parent=Msa0162030-mRNA-1
Gene Sequence

>Msa0162030

ATGGCTCTTCTTCCCACTCGCCAACTTCACCCATTTCATACTTCTCCTAACTTTCATCATCCTCTCCGTTTCTTCACCACAATTTCTTCTTCTTCTTCAATCTATAAAAGCTTCACTTTCAAAACACCCACCAAAAATTTCACTTATCTTTCTTCAAAACACCCCATTTTTTACCATAAGAGTTTCTGCACTGATACATGGTTAAAACGCTGGAATGAACACAATCGCCCAAAACCGCCACGCGGGGTTTTAAATTATCAAGGTTCTGGAAATGGGCATTCATCAAAATCTGATTTTGATAGCTCTGATGATGAGGGTGATGGTGGTAGTAGAATGGATAGAATTGTTGAGAAATTGAAGAAATTTGGGTATGAAAGTGATGAAAATGAGAATATAAAAGAAGAAGGAGTGATAGAAAAAGGGTCAGTGGAGGATATATTTTATGTAGAAGAAGGAATGTTGCCTAATACAAGAGGTGGGTTTTCGCCGGAATCACCATTTGGGATTGGAAGTTATGGAAGTGGTGATGGTGGTGAAGTGAGGTTTCCTTGGGAGAAACCAGTAGTGGATGAAGAAGTTGAAGAGAGGACGAGTTCGCGGAAGAAGAGTAAGACTTCTATGGCGGAATTGACTCTTCCTGAGTCTGAATTGAGGAGGTTGCTGAAGTTAACTTTTATGAAGAAGCATAAGACGAGAATCGGTGGTGGTGGTGTTACTCAAGCTGTTGTTGATAAGATTCATGAGAGGTGGAAGACTTCTGAGATTGTTAGGCTTAAGTTTGAAGGTGATGCTGCACTTAACATGAAGAGGATGCATGAGATATTGGAGAAAAAAACTGGTGGTCTGGTGATTTGGAGGTCTGGCAACTCTGTTTCCTTATACAGAGGTGTGAGCTACAAGGATCCTTCAATACAACAGAATAAACAGTTATATAGGAAAAACGAGAAATCTTCGAAGTTTCTATCAGCACCTTCGGATGATTTTGAAGTGGAGCCTTCTGAGTTTACTTCTGATTCTGAGACAAAAACATCGTTGGAAAAATTGGAATCTACAAATGATCAGAAAGAAAAAGTTAATCTGCCAAAAGTCAGTTATGAAGATGAAGTAGACAAGTTATTGGATGGTCTAGGTCCTAGATATACAGATTGGCCTGGATGTGAGCCACTGCCTGTCGATGCGGATATGCTTCCTCCAACTGTTCCTGGTTACCAACCTCCCTTCAGAGTTCTTCCTTTCGGAGTGAGACCGACACTTGGTTTCAAGGAGGCAACTTCTCTACGAAGGATTGCTAGGGGACTCCCTCCACATTTTGCATTAGGTAGAAACAGGCAGCTTCAAGGTTTAGCTGCAGCCATGATCAAATTGTGGGAAAAAAGTTCTATAGCAAAAGTTGCACTAAAACGTGGTGTGCAGCTAACTACCAGCGAGAGAATGGCAGAAGAGATCAAGAAATTGACAGGTGGCATAATACTCTCCAGAAATAAAGACTTCTTGGTCTTTTATCGAGGGAAGAATTTTTTATCACCAGATGTCACTCAAGCCTTGCTAGAGAGGGAAAGAATGGCCAAAGCAATGCAGGATGAGGAGGAGCAAGCAAGATTGAGAGCGTCATCATTGATCTTACCAGCTATTAATACATCAGAGTTGTCAGCGGAGGCTGGGACTCTTGGCGAAACTTTGGATGCAGATGCTAAGTGGGGAAAGACATTGGATGAGCGTCATGAGCAAAAGGTTATGAGAGAAGTAGAACAACTACGGCATGCCAACATTGTTAGAAAGTTAGAAGAGAAGCTTTCACTTGCTGAAAGAAAGATAAGGAGAGCTGAAAGAGCCCTAACGAAGGTGGAGGTGTCTTTGAAGCCATCAGAAAACAGAGCAGACCCTGAAAGTATAACCGATGAAGAGAGATTTATGTTTCGGAAATTAGGATTGCGGATGAAAGCTTTCTTACTTCTTGGTAGACGTGGAGTTTTTGACGGTACTATCGAGAACATGCACTTGCACTGGAAGTACCGGGAACTGGTCAAGATAATTGTTAAGGCTAACAACTTTGAACATGTAAAAAAAATTGCACTAGCACTTGAAGCTGAGAGTGGTGGTGTTCTGGTTTCAGTTGACAAAGTTTCAAAAGGATATTCTATACTTGTTTACCGGGGAAAGGATTACCAGCGCCCTTCAATGATGAGACCAAAGAATCTCTTGACAAAGAGAAAGGCTTTGGCACGTTCAATCGAGCTTCAACGACATGAGGCACTTTCAAGTCATATTTCAACTTTGCAAAGTAGAGTGGAGAAGTTAAGATCCGAAATAGAACAAATAGAGAAAGTAAAGGAGGAAGGAGACGAAGCATTGTATAACAGATTAGATTCGGCTTATTCTACAGATGATGCTAACTCTGAGGCGGAGGATGATGAGGAAGAAGTTGAGGCATATCTTCAGAGCGACAATGATGAAAATGATAGTGAAGTTGAAAGTGATATTATTTATTTCCAACCTGAGGAATTTGCCTCACAAAATTGA
Protein sequence

>Msa0162030

MALLPTRQLHPFHTSPNFHHPLRFFTTISSSSSIYKSFTFKTPTKNFTYLSSKHPIFYHKSFCTDTWLKRWNEHNRPKPPRGVLNYQGSGNGHSSKSDFDSSDDEGDGGSRMDRIVEKLKKFGYESDENENIKEEGVIEKGSVEDIFYVEEGMLPNTRGGFSPESPFGIGSYGSGDGGEVRFPWEKPVVDEEVEERTSSRKKSKTSMAELTLPESELRRLLKLTFMKKHKTRIGGGGVTQAVVDKIHERWKTSEIVRLKFEGDAALNMKRMHEILEKKTGGLVIWRSGNSVSLYRGVSYKDPSIQQNKQLYRKNEKSSKFLSAPSDDFEVEPSEFTSDSETKTSLEKLESTNDQKEKVNLPKVSYEDEVDKLLDGLGPRYTDWPGCEPLPVDADMLPPTVPGYQPPFRVLPFGVRPTLGFKEATSLRRIARGLPPHFALGRNRQLQGLAAAMIKLWEKSSIAKVALKRGVQLTTSERMAEEIKKLTGGIILSRNKDFLVFYRGKNFLSPDVTQALLERERMAKAMQDEEEQARLRASSLILPAINTSELSAEAGTLGETLDADAKWGKTLDERHEQKVMREVEQLRHANIVRKLEEKLSLAERKIRRAERALTKVEVSLKPSENRADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIVKANNFEHVKKIALALEAESGGVLVSVDKVSKGYSILVYRGKDYQRPSMMRPKNLLTKRKALARSIELQRHEALSSHISTLQSRVEKLRSEIEQIEKVKEEGDEALYNRLDSAYSTDDANSEAEDDEEEVEAYLQSDNDENDSEVESDIIYFQPEEFASQN*