AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0466100

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466100 MtrunA17_Chr3g0118771 89.727 477 49 0 3 479 18 494 0.0 898
Msa0466100 MtrunA17_Chr3g0118711 85.504 476 69 0 3 478 10 485 0.0 864
Msa0466100 MtrunA17_Chr3g0118691 81.837 479 87 0 1 479 10 488 0.0 841
Msa0466100 MtrunA17_Chr3g0118671 80.962 478 91 0 1 478 1 478 0.0 833
Msa0466100 MtrunA17_Chr3g0118701 79.123 479 100 0 1 479 10 488 0.0 822
Msa0466100 MtrunA17_Chr3g0118751 81.420 479 60 2 1 479 1 450 0.0 798
Msa0466100 MtrunA17_Chr3g0118661 64.570 477 168 1 3 479 10 485 0.0 632
Msa0466100 MtrunA17_Chr3g0118721 91.864 295 24 0 185 479 1 295 0.0 574
Msa0466100 MtrunA17_Chr5g0426431 53.503 471 213 5 6 474 12 478 0.0 532
Msa0466100 MtrunA17_Chr3g0092641 52.966 472 216 5 5 474 11 478 0.0 523
Msa0466100 MtrunA17_Chr3g0078841 51.368 475 227 3 2 474 6 478 0.0 518
Msa0466100 MtrunA17_Chr6g0454341 50.316 475 232 3 2 474 6 478 9.11e-179 509
Msa0466100 MtrunA17_Chr6g0454331 51.042 480 225 4 2 474 3 479 5.89e-176 503
Msa0466100 MtrunA17_Chr6g0454191 50.209 478 229 5 3 474 7 481 2.71e-175 501
Msa0466100 MtrunA17_Chr6g0454301 50.947 475 229 3 2 474 259 731 2.82e-173 504
Msa0466100 MtrunA17_Chr6g0454301 54.585 229 101 2 244 472 3 228 5.04e-84 274
Msa0466100 MtrunA17_Chr6g0454321 49.370 476 234 4 2 475 6 476 3.40e-173 501
Msa0466100 MtrunA17_Chr6g0454321 45.926 135 68 2 3 132 501 635 2.15e-28 119
Msa0466100 MtrunA17_Chr4g0050341 49.895 475 232 4 4 473 17 490 2.85e-172 493
Msa0466100 MtrunA17_Chr6g0454401 50.313 479 229 4 2 474 6 481 3.13e-172 493
Msa0466100 MtrunA17_Chr8g0336331 50.105 475 232 4 2 474 6 477 1.63e-171 491
Msa0466100 MtrunA17_Chr6g0454201 52.101 476 220 5 4 474 9 481 1.52e-170 489
Msa0466100 MtrunA17_Chr6g0454181 48.637 477 237 4 3 474 7 480 2.27e-170 488
Msa0466100 MtrunA17_Chr6g0453951 50.104 479 229 5 2 474 53 527 3.68e-169 487
Msa0466100 MtrunA17_Chr2g0278711 49.684 475 231 5 3 474 8 477 8.60e-169 484
Msa0466100 MtrunA17_Chr6g0454211 51.357 479 223 5 2 474 293 767 6.82e-167 489
Msa0466100 MtrunA17_Chr6g0454211 34.857 350 143 4 124 473 3 267 5.56e-59 207
Msa0466100 MtrunA17_Chr6g0453961 49.476 477 232 5 4 474 17 490 1.27e-166 479
Msa0466100 MtrunA17_Chr6g0454361 50.630 476 227 4 4 474 9 481 1.62e-166 478
Msa0466100 MtrunA17_Chr8g0359821 48.109 476 241 3 2 474 6 478 1.01e-165 476
Msa0466100 MtrunA17_Chr6g0454291 50.209 478 230 4 2 474 3 477 4.75e-165 474
Msa0466100 MtrunA17_Chr6g0454351 48.852 479 218 6 2 474 8 465 2.22e-163 470
Msa0466100 MtrunA17_Chr6g0454261 47.699 478 242 4 2 474 6 480 5.59e-159 459
Msa0466100 MtrunA17_Chr6g0454151 47.609 481 242 5 2 477 6 481 1.79e-155 450
Msa0466100 MtrunA17_Chr6g0454141 45.188 478 254 4 2 474 6 480 3.56e-155 449
Msa0466100 MtrunA17_Chr6g0454121 47.158 475 244 4 4 474 8 479 1.30e-154 448
Msa0466100 MtrunA17_Chr6g0452771 48.008 477 240 4 3 474 7 480 1.36e-154 448
Msa0466100 MtrunA17_Chr6g0454131 46.737 475 246 4 4 474 8 479 1.01e-153 446
Msa0466100 MtrunA17_Chr7g0217881 47.083 480 226 6 1 474 5 462 1.99e-151 439
Msa0466100 MtrunA17_Chr5g0423981 46.751 477 209 7 4 474 8 445 1.20e-146 427
Msa0466100 MtrunA17_Chr6g0454251 46.970 396 202 4 2 392 3 395 2.00e-132 388
Msa0466100 MtrunA17_Chr5g0426401 51.282 312 145 5 166 474 4 311 7.63e-112 333
Msa0466100 MtrunA17_Chr6g0454271 53.103 290 133 2 185 474 1 287 1.99e-106 318
Msa0466100 MtrunA17_Chr8g0355011 41.873 363 166 2 112 474 45 362 4.21e-100 305
Msa0466100 MtrunA17_Chr6g0454221 56.652 233 99 2 244 476 3 233 1.31e-92 283
Msa0466100 MtrunA17_Chr5g0412131 35.579 475 280 11 5 471 11 467 6.50e-92 287
Msa0466100 MtrunA17_Chr3g0112771 34.958 472 271 11 7 474 13 452 2.22e-89 280
Msa0466100 MtrunA17_Chr6g0454171 41.667 336 145 5 143 474 22 310 5.34e-89 274
Msa0466100 MtrunA17_Chr5g0412111 33.753 477 289 11 3 471 2 459 2.68e-87 275
Msa0466100 MtrunA17_Chr5g0412101 34.526 475 286 10 5 471 11 468 3.79e-86 272
Msa0466100 MtrunA17_Chr3g0112761 36.211 475 265 13 6 474 8 450 8.82e-86 271
Msa0466100 MtrunA17_Chr4g0032331 33.747 483 278 11 4 478 6 454 4.03e-78 251
Msa0466100 MtrunA17_Chr5g0414331 31.884 483 280 11 6 477 13 457 6.03e-74 240
Msa0466100 MtrunA17_Chr5g0414321 31.148 488 277 11 6 477 11 455 1.96e-72 236
Msa0466100 MtrunA17_Chr7g0250001 30.271 479 300 9 1 475 1 449 4.57e-72 235
Msa0466100 MtrunA17_Chr7g0249981 31.006 487 288 12 4 479 23 472 2.74e-71 234
Msa0466100 MtrunA17_Chr3g0098111 28.660 485 317 10 6 479 9 475 2.67e-69 228
Msa0466100 MtrunA17_Chr8g0365811 31.590 478 278 15 7 462 496 946 4.06e-68 234
Msa0466100 MtrunA17_Chr8g0365811 29.437 462 287 13 6 448 9 450 3.55e-58 207
Msa0466100 MtrunA17_Chr7g0218791 32.158 482 274 15 5 472 4 446 1.25e-67 223
Msa0466100 MtrunA17_Chr6g0464921 29.979 477 295 10 5 473 10 455 1.74e-67 223
Msa0466100 MtrunA17_Chr6g0464881 30.328 488 286 12 2 474 7 455 1.74e-67 223
Msa0466100 MtrunA17_Chr7g0218811 30.361 471 285 13 5 470 14 446 2.37e-67 223
Msa0466100 MtrunA17_Chr8g0336271 45.000 240 129 2 2 239 6 244 6.66e-67 216
Msa0466100 MtrunA17_Chr1g0207861 30.208 480 304 10 6 473 8 468 8.00e-67 222
Msa0466100 MtrunA17_Chr1g0161351 30.000 480 305 10 6 473 37 497 1.85e-66 222
Msa0466100 MtrunA17_Chr7g0218831 32.059 471 276 13 5 470 5 436 2.68e-66 219
Msa0466100 MtrunA17_Chr1g0207981 30.498 482 301 10 6 474 13 473 5.05e-66 220
Msa0466100 MtrunA17_Chr1g0207971 29.436 479 300 11 6 476 8 456 6.33e-66 219
Msa0466100 MtrunA17_Chr7g0218841 31.635 471 279 15 5 470 5 437 1.03e-65 218
Msa0466100 MtrunA17_Chr7g0218821 30.608 477 287 15 5 470 4 447 2.56e-65 217
Msa0466100 MtrunA17_Chr6g0464871 31.263 483 284 13 6 476 23 469 8.28e-65 216
Msa0466100 MtrunA17_Chr3g0118731 91.667 108 9 0 58 165 28 135 9.16e-65 206
Msa0466100 MtrunA17_Chr6g0454371 54.651 172 77 1 303 474 1 171 3.66e-64 205
Msa0466100 MtrunA17_Chr6g0464841 30.435 483 282 13 6 473 11 454 1.52e-63 213
Msa0466100 MtrunA17_Chr4g0044511 29.735 491 304 10 2 473 36 504 3.30e-63 213
Msa0466100 MtrunA17_Chr6g0454231 45.259 232 125 1 2 231 246 477 2.13e-62 210
Msa0466100 MtrunA17_Chr6g0454231 42.188 256 106 4 220 474 5 219 9.38e-59 201
Msa0466100 MtrunA17_Chr6g0464861 30.849 483 287 12 2 473 7 453 6.82e-62 208
Msa0466100 MtrunA17_Chr1g0207831 29.920 498 287 15 7 479 9 469 3.37e-61 207
Msa0466100 MtrunA17_Chr1g0207951 30.000 480 297 12 6 476 124 573 4.60e-61 216
Msa0466100 MtrunA17_Chr1g0207951 28.221 489 306 11 6 479 656 1114 1.58e-57 205
Msa0466100 MtrunA17_Chr5g0431441 31.687 486 280 16 6 475 18 467 5.71e-60 204
Msa0466100 MtrunA17_Chr8g0377921 29.072 485 299 14 5 470 2 460 1.33e-59 202
Msa0466100 MtrunA17_Chr3g0121991 30.707 495 298 18 1 473 74 545 3.78e-59 203
Msa0466100 MtrunA17_Chr8g0380531 28.452 478 302 12 6 473 10 457 4.72e-59 201
Msa0466100 MtrunA17_Chr6g0453981 41.810 232 132 2 124 355 3 231 5.06e-58 191
Msa0466100 MtrunA17_Chr5g0426411 53.939 165 75 1 2 165 8 172 6.29e-58 189
Msa0466100 MtrunA17_Chr8g0377941 30.266 489 290 15 7 476 8 464 6.49e-58 198
Msa0466100 MtrunA17_Chr8g0336261 60.584 137 53 1 303 439 1 136 2.41e-57 186
Msa0466100 MtrunA17_Chr4g0053321 29.268 492 304 14 2 477 20 483 4.74e-57 197
Msa0466100 MtrunA17_Chr3g0122001 30.000 490 308 13 1 473 481 952 1.03e-56 202
Msa0466100 MtrunA17_Chr3g0122001 29.472 492 309 12 1 473 1 473 7.11e-56 200
Msa0466100 MtrunA17_Chr5g0401721 27.328 494 309 16 7 477 9 475 4.04e-56 194
Msa0466100 MtrunA17_Chr5g0393591 30.208 480 262 12 6 473 17 435 1.74e-55 191
Msa0466100 MtrunA17_Chr1g0207931 38.057 247 142 3 223 462 244 486 2.06e-55 192
Msa0466100 MtrunA17_Chr1g0207931 30.263 152 99 4 6 153 92 240 4.88e-12 68.2
Msa0466100 MtrunA17_Chr4g0053501 28.221 489 303 14 6 477 11 468 4.50e-55 191
Msa0466100 MtrunA17_Chr7g0249931 28.986 483 293 14 6 475 40 485 6.02e-54 188
Msa0466100 MtrunA17_Chr6g0454281 46.842 190 96 2 2 186 6 195 2.83e-53 178
Msa0466100 MtrunA17_Chr4g0072771 27.044 477 305 12 3 471 22 463 3.50e-53 186
Msa0466100 MtrunA17_Chr6g0453941 45.498 211 110 3 125 333 56 263 7.12e-53 179
Msa0466100 MtrunA17_Chr7g0243931 28.884 502 303 13 2 473 13 490 1.69e-52 184
Msa0466100 MtrunA17_Chr7g0243681 29.116 498 294 15 6 473 11 479 2.01e-52 184
Msa0466100 MtrunA17_Chr7g0275681 29.331 508 288 17 5 476 11 483 7.36e-52 182
Msa0466100 MtrunA17_Chr7g0243631 29.719 498 296 15 6 473 13 486 8.11e-52 182
Msa0466100 MtrunA17_Chr8g0366391 29.376 497 309 15 6 479 9 486 8.47e-52 182
Msa0466100 MtrunA17_Chr7g0265041 29.249 506 304 15 5 478 10 493 1.13e-51 182
Msa0466100 MtrunA17_Chr1g0153451 29.470 509 288 17 1 477 1 470 1.17e-51 181
Msa0466100 MtrunA17_Chr8g0374931 29.821 503 293 16 3 473 7 481 5.62e-51 180
Msa0466100 MtrunA17_Chr5g0431401 28.016 489 289 16 2 473 6 448 1.09e-50 178
Msa0466100 MtrunA17_Chr8g0336741 30.290 482 275 17 6 461 13 459 1.94e-50 178
Msa0466100 MtrunA17_Chr7g0243771 28.963 511 289 17 1 473 1 475 3.84e-50 178
Msa0466100 MtrunA17_Chr8g0336691 29.102 512 260 19 6 469 919 1375 4.01e-50 184
Msa0466100 MtrunA17_Chr8g0336691 26.358 497 303 15 1 469 8 469 3.13e-48 178
Msa0466100 MtrunA17_Chr8g0336691 27.869 488 255 16 6 462 480 901 1.34e-45 171
Msa0466100 MtrunA17_Chr5g0431361 28.395 486 286 16 6 473 12 453 8.39e-50 176
Msa0466100 MtrunA17_Chr7g0243951 27.976 504 300 13 4 473 9 483 1.40e-49 176
Msa0466100 MtrunA17_Chr5g0431421 28.513 491 286 15 2 474 6 449 1.45e-49 176
Msa0466100 MtrunA17_Chr7g0232401 27.160 486 300 14 1 462 1 456 2.12e-49 176
Msa0466100 MtrunA17_Chr7g0265141 29.586 507 290 16 6 474 9 486 3.38e-49 175
Msa0466100 MtrunA17_Chr3g0106231 29.314 481 282 16 6 474 18 452 4.17e-49 175
Msa0466100 MtrunA17_Chr6g0449931 29.594 517 270 19 1 473 1 467 4.81e-49 174
Msa0466100 MtrunA17_Chr4g0072761 26.681 476 299 12 6 471 15 450 6.94e-49 174
Msa0466100 MtrunA17_Chr4g0044501 29.000 500 304 16 6 479 10 484 1.24e-48 174
Msa0466100 MtrunA17_Chr5g0440421 28.008 507 315 17 2 475 6 495 1.36e-48 174
Msa0466100 MtrunA17_Chr8g0336651 28.770 504 260 18 6 462 781 1232 1.61e-48 179
Msa0466100 MtrunA17_Chr8g0336651 29.032 496 289 17 1 469 1 460 1.16e-47 177
Msa0466100 MtrunA17_Chr8g0336651 32.941 255 131 6 223 469 548 770 5.28e-37 145
Msa0466100 MtrunA17_Chr5g0431371 28.423 482 288 15 6 473 10 448 1.76e-48 172
Msa0466100 MtrunA17_Chr2g0294931 28.770 504 300 15 1 473 6 481 1.83e-48 174
Msa0466100 MtrunA17_Chr8g0373301 29.736 417 248 10 72 469 72 462 2.63e-48 172
Msa0466100 MtrunA17_Chr7g0232331 27.381 504 297 17 1 473 1 466 5.61e-48 172
Msa0466100 MtrunA17_Chr7g0243801 28.457 499 303 15 3 473 4 476 7.67e-48 172
Msa0466100 MtrunA17_Chr8g0335161 28.317 505 297 17 1 477 1 468 1.02e-47 171
Msa0466100 MtrunA17_Chr7g0232391 27.976 504 291 17 1 472 1 464 1.13e-47 171
Msa0466100 MtrunA17_Chr7g0232411 27.634 503 294 16 1 472 1 464 1.19e-47 171
Msa0466100 MtrunA17_Chr5g0448551 26.067 445 293 11 3 441 4 418 1.31e-47 170
Msa0466100 MtrunA17_Chr6g0462571 31.319 364 208 10 121 469 121 457 1.63e-47 171
Msa0466100 MtrunA17_Chr8g0336731 28.834 489 287 17 8 470 34 487 1.81e-47 171
Msa0466100 MtrunA17_Chr6g0486251 27.475 495 298 15 1 469 1 460 1.82e-47 170
Msa0466100 MtrunA17_Chr6g0486201 27.475 495 298 15 1 469 1 460 1.82e-47 170
Msa0466100 MtrunA17_Chr8g0335141 28.827 503 290 18 1 473 4 468 2.22e-47 170
Msa0466100 MtrunA17_Chr2g0294921 29.376 497 290 15 9 473 163 630 3.50e-47 172
Msa0466100 MtrunA17_Chr7g0243861 28.205 507 292 16 6 473 14 487 4.08e-47 170
Msa0466100 MtrunA17_Chr4g0060511 28.373 504 298 15 6 473 11 487 6.19e-47 169
Msa0466100 MtrunA17_Chr5g0419761 28.628 503 308 15 6 478 9 490 6.51e-47 169
Msa0466100 MtrunA17_Chr4g0066221 28.800 500 304 14 1 473 6 480 2.50e-46 167
Msa0466100 MtrunA17_Chr4g0014061 29.709 515 273 22 2 473 4 472 2.75e-46 167
Msa0466100 MtrunA17_Chr7g0249961 35.000 240 137 5 244 475 33 261 3.43e-46 161
Msa0466100 MtrunA17_Chr6g0459311 27.545 501 290 18 1 469 8 467 1.54e-45 165
Msa0466100 MtrunA17_Chr7g0232341 27.327 505 296 17 1 473 1 466 2.48e-45 164
Msa0466100 MtrunA17_Chr7g0265151 27.559 508 303 17 6 477 9 487 2.66e-45 165
Msa0466100 MtrunA17_Chr8g0374971 28.429 503 285 16 9 473 15 480 2.76e-45 165
Msa0466100 MtrunA17_Chr4g0011051 28.627 510 303 17 1 474 4 488 3.10e-45 165
Msa0466100 MtrunA17_Chr7g0265101 28.180 511 307 15 2 477 5 490 3.67e-45 165
Msa0466100 MtrunA17_Chr7g0275511 30.000 490 286 16 5 469 14 471 6.22e-45 164
Msa0466100 MtrunA17_Chr5g0419771 26.969 508 304 13 6 475 36 514 7.22e-45 164
Msa0466100 MtrunA17_Chr4g0066201 28.655 513 279 16 1 475 13 476 2.06e-44 162
Msa0466100 MtrunA17_Chr7g0243871 28.911 505 287 16 3 473 6 472 2.23e-44 162
Msa0466100 MtrunA17_Chr7g0243761 27.328 494 283 14 6 473 11 454 3.68e-44 161
Msa0466100 MtrunA17_Chr7g0232311 31.818 308 175 6 182 470 169 460 3.89e-44 161
Msa0466100 MtrunA17_Chr7g0265051 27.853 517 299 17 2 477 5 488 7.24e-44 161
Msa0466100 MtrunA17_Chr4g0066261 27.992 493 302 16 9 473 14 481 8.47e-44 160
Msa0466100 MtrunA17_Chr6g0462541 30.263 380 225 7 104 469 106 459 9.59e-44 160
Msa0466100 MtrunA17_Chr6g0462521 27.642 492 287 14 4 471 2 448 1.38e-43 159
Msa0466100 MtrunA17_Chr5g0428081 27.551 490 306 14 9 473 14 479 1.88e-43 160
Msa0466100 MtrunA17_Chr7g0218311 27.767 497 295 17 9 473 19 483 2.00e-43 160
Msa0466100 MtrunA17_Chr6g0462531 26.869 495 283 14 4 462 2 453 2.27e-43 159
Msa0466100 MtrunA17_Chr5g0442561 27.701 509 298 18 3 476 2 475 2.68e-43 159
Msa0466100 MtrunA17_Chr8g0339461 31.746 378 213 10 112 466 109 464 3.82e-43 159
Msa0466100 MtrunA17_Chr5g0442601 28.119 505 305 19 3 476 401 878 5.15e-43 162
Msa0466100 MtrunA17_Chr5g0442601 36.667 180 93 4 246 414 164 333 3.62e-26 112
Msa0466100 MtrunA17_Chr8g0334851 27.126 494 300 14 1 466 1 462 5.31e-43 158
Msa0466100 MtrunA17_Chr5g0410941 26.946 501 309 14 1 473 18 489 5.54e-43 159
Msa0466100 MtrunA17_Chr1g0159551 26.132 486 269 16 11 462 19 448 6.63e-43 157
Msa0466100 MtrunA17_Chr8g0374901 28.056 499 290 15 9 473 15 478 7.08e-43 158
Msa0466100 MtrunA17_Chr1g0179901 25.349 501 322 15 6 475 16 495 7.46e-43 158
Msa0466100 MtrunA17_Chr7g0235051 28.400 500 267 18 6 472 11 452 9.48e-43 157
Msa0466100 MtrunA17_Chr1g0153461 39.269 219 114 6 278 477 1 219 1.13e-42 150
Msa0466100 MtrunA17_Chr8g0361371 27.202 511 284 20 2 470 3 467 1.18e-42 157
Msa0466100 MtrunA17_Chr8g0374941 27.655 499 294 17 9 473 952 1417 1.54e-42 162
Msa0466100 MtrunA17_Chr8g0374941 26.653 484 286 17 9 457 14 463 1.15e-36 144
Msa0466100 MtrunA17_Chr8g0374941 27.629 485 276 16 9 455 479 926 1.69e-36 144
Msa0466100 MtrunA17_Chr8g0339631 28.947 380 226 9 104 462 101 457 2.15e-42 157
Msa0466100 MtrunA17_Chr6g0462551 32.450 302 175 7 182 469 174 460 2.48e-42 156
Msa0466100 MtrunA17_Chr8g0350881 27.976 504 290 13 7 473 13 480 3.22e-42 156
Msa0466100 MtrunA17_Chr7g0243781 26.378 508 299 14 3 473 6 475 3.23e-42 156
Msa0466100 MtrunA17_Chr8g0347271 27.789 475 296 11 5 462 18 462 6.45e-42 155
Msa0466100 MtrunA17_Chr8g0339451 31.675 382 216 10 104 462 93 452 7.75e-42 155
Msa0466100 MtrunA17_Chr3g0079731 27.096 513 297 17 1 471 1 478 8.14e-42 155
Msa0466100 MtrunA17_Chr8g0347281 28.099 484 283 13 5 462 17 461 8.50e-42 155
Msa0466100 MtrunA17_Chr5g0442541 29.051 506 284 18 3 474 2 466 9.84e-42 154
Msa0466100 MtrunA17_Chr4g0066281 27.789 493 287 16 9 473 15 466 1.32e-41 154
Msa0466100 MtrunA17_Chr5g0442521 26.378 508 297 16 3 470 2 472 3.28e-41 153
Msa0466100 MtrunA17_Chr5g0442581 26.953 512 308 16 3 479 2 482 3.50e-41 154
Msa0466100 MtrunA17_Chr8g0334861 27.016 496 304 16 1 472 1 462 1.46e-40 151
Msa0466100 MtrunA17_Chr5g0448521 27.451 510 293 19 3 476 2 470 1.85e-40 151
Msa0466100 MtrunA17_Chr8g0339601 33.117 308 170 9 177 461 24 318 2.52e-40 147
Msa0466100 MtrunA17_Chr8g0334831 26.939 490 268 16 1 443 1 447 4.97e-40 150
Msa0466100 MtrunA17_Chr4g0066151 27.163 497 296 14 7 473 19 479 7.77e-40 150
Msa0466100 MtrunA17_Chr6g0454111 43.558 163 89 2 162 323 23 183 9.20e-40 142
Msa0466100 MtrunA17_Chr6g0463851 27.146 501 297 16 9 473 14 482 9.97e-40 149
Msa0466100 MtrunA17_Chr7g0265111 26.877 506 305 17 6 474 39 516 1.07e-39 150
Msa0466100 MtrunA17_Chr5g0401851 25.540 509 299 17 8 473 12 483 6.51e-39 147
Msa0466100 MtrunA17_Chr4g0066131 26.113 494 305 12 7 473 14 474 9.97e-39 147
Msa0466100 MtrunA17_Chr5g0442511 26.667 510 279 16 3 476 46 496 1.35e-38 146
Msa0466100 MtrunA17_Chr8g0339441 38.647 207 108 4 280 467 217 423 1.43e-38 145
Msa0466100 MtrunA17_Chr4g0044521 26.585 489 301 16 7 471 10 464 2.39e-38 145
Msa0466100 MtrunA17_Chr2g0329111 28.074 488 293 18 1 459 1 459 5.53e-38 145
Msa0466100 MtrunA17_Chr5g0416741 24.847 491 324 12 7 473 14 483 2.12e-37 143
Msa0466100 MtrunA17_Chr1g0173121 36.224 196 112 4 280 462 256 451 2.21e-37 142
Msa0466100 MtrunA17_Chr3g0118741 96.667 60 2 0 1 60 1 60 2.88e-37 131
Msa0466100 MtrunA17_Chr5g0432731 31.752 274 147 6 219 475 48 298 4.45e-37 138
Msa0466100 MtrunA17_Chr8g0370941 24.266 511 315 14 4 471 5 486 1.60e-36 141
Msa0466100 MtrunA17_Chr6g0463861 25.992 504 306 17 1 473 6 473 2.49e-36 140
Msa0466100 MtrunA17_Chr5g0429711 26.719 509 292 21 1 477 6 465 4.70e-36 139
Msa0466100 MtrunA17_Chr4g0066171 25.737 509 294 14 1 473 16 476 6.93e-36 139
Msa0466100 MtrunA17_Chr5g0442491 26.654 514 299 16 3 476 2 477 1.00e-35 138
Msa0466100 MtrunA17_Chr7g0243851 35.401 274 155 9 219 473 172 442 2.55e-35 137
Msa0466100 MtrunA17_Chr5g0403641 30.662 287 156 8 223 478 236 510 2.91e-35 137
Msa0466100 MtrunA17_Chr6g0463891 27.586 493 310 15 7 473 13 484 4.62e-35 136
Msa0466100 MtrunA17_Chr5g0429681 25.237 527 282 20 1 477 39 503 5.04e-35 136
Msa0466100 MtrunA17_Chr5g0416821 25.314 478 327 11 7 473 15 473 5.20e-35 136
Msa0466100 MtrunA17_Chr7g0243711 36.321 212 117 5 279 473 106 316 1.03e-34 132
Msa0466100 MtrunA17_Chr5g0420801 26.423 492 306 18 2 473 3 458 2.53e-34 134
Msa0466100 MtrunA17_Chr4g0044481 27.273 418 254 12 6 417 27 400 4.09e-34 133
Msa0466100 MtrunA17_Chr7g0241801 27.332 461 262 21 3 450 6 406 4.20e-34 133
Msa0466100 MtrunA17_Chr2g0294941 27.671 365 220 11 115 455 17 361 5.32e-34 131
Msa0466100 MtrunA17_Chr3g0106251 29.545 308 187 8 176 474 8 294 7.86e-34 129
Msa0466100 MtrunA17_Chr1g0165701 25.355 493 317 13 7 473 16 483 2.31e-33 132
Msa0466100 MtrunA17_Chr1g0196851 25.103 486 281 16 2 454 45 480 2.85e-33 131
Msa0466100 MtrunA17_Chr8g0355221 24.494 494 323 13 7 473 16 486 3.58e-33 131
Msa0466100 MtrunA17_Chr3g0079711 38.587 184 94 4 307 471 3 186 6.23e-33 123
Msa0466100 MtrunA17_Chr4g0042891 26.358 497 305 18 2 472 3 464 7.87e-33 130
Msa0466100 MtrunA17_Chr4g0029151 23.355 471 307 12 1 454 15 448 2.50e-32 128
Msa0466100 MtrunA17_Chr2g0278721 29.307 505 282 24 6 478 517 978 2.54e-32 131
Msa0466100 MtrunA17_Chr2g0278721 24.565 460 301 16 6 450 15 443 8.10e-27 114
Msa0466100 MtrunA17_Chr8g0361411 27.329 483 299 20 6 473 8 453 3.31e-32 128
Msa0466100 MtrunA17_Chr7g0241781 27.719 469 258 23 3 454 6 410 9.54e-32 126
Msa0466100 MtrunA17_Chr4g0029131 24.580 476 295 16 1 454 7 440 1.63e-31 128
Msa0466100 MtrunA17_Chr7g0243911 36.453 203 101 6 277 462 18 209 1.63e-31 120
Msa0466100 MtrunA17_Chr4g0042931 25.896 502 299 16 2 472 3 462 3.90e-31 125
Msa0466100 MtrunA17_Chr2g0302961 24.802 504 300 15 6 473 5 465 4.86e-31 125
Msa0466100 MtrunA17_Chr1g0207881 39.161 143 79 2 326 462 233 373 1.01e-30 122
Msa0466100 MtrunA17_Chr1g0207881 25.000 296 170 11 6 289 8 263 7.88e-12 67.0
Msa0466100 MtrunA17_Chr2g0302991 28.477 302 180 7 193 473 176 462 1.37e-30 123
Msa0466100 MtrunA17_Chr6g0466831 25.615 488 309 19 6 477 18 467 2.70e-30 122
Msa0466100 MtrunA17_Chr2g0307961 27.812 489 303 20 5 474 12 469 5.74e-30 122
Msa0466100 MtrunA17_Chr8g0369341 24.900 502 311 18 2 473 3 468 5.84e-30 122
Msa0466100 MtrunA17_Chr8g0336251 26.681 461 291 15 6 447 7 439 1.43e-29 120
Msa0466100 MtrunA17_Chr8g0336321 26.681 461 291 15 6 447 7 439 1.73e-29 120
Msa0466100 MtrunA17_Chr8g0382021 31.658 199 120 4 280 462 279 477 3.55e-29 120
Msa0466100 MtrunA17_Chr6g0466841 25.051 487 313 18 6 477 18 467 7.59e-29 118
Msa0466100 MtrunA17_Chr7g0243611 40.690 145 82 3 279 420 134 277 2.83e-28 114
Msa0466100 MtrunA17_Chr6g0464091 26.013 469 294 18 2 450 13 448 3.38e-28 117
Msa0466100 MtrunA17_Chr8g0367221 26.383 470 273 22 6 444 798 1225 1.75e-26 114
Msa0466100 MtrunA17_Chr8g0367221 27.039 466 274 23 6 444 12 438 3.84e-24 106
Msa0466100 MtrunA17_Chr8g0367221 25.435 460 300 19 6 449 1288 1720 4.68e-24 106
Msa0466100 MtrunA17_Chr7g0232351 27.857 420 232 16 1 391 1 378 1.98e-26 110
Msa0466100 MtrunA17_Chr7g0243811 25.060 419 260 13 18 420 1 381 2.51e-26 110
Msa0466100 MtrunA17_Chr5g0427561 55.952 84 37 0 391 474 2 85 3.70e-26 101
Msa0466100 MtrunA17_Chr2g0302851 25.536 466 293 18 2 450 11 439 1.56e-25 108
Msa0466100 MtrunA17_Chr4g0040691 25.000 500 295 21 6 474 8 458 3.08e-25 108
Msa0466100 MtrunA17_Chr4g0069611 25.431 464 287 18 6 450 15 438 3.46e-25 108
Msa0466100 MtrunA17_Chr8g0337381 45.455 121 60 2 353 469 3 121 5.37e-25 100
Msa0466100 MtrunA17_Chr6g0482061 24.792 480 314 12 6 461 11 467 6.95e-25 107
Msa0466100 MtrunA17_Chr5g0409591 25.000 484 278 18 7 440 5 453 5.75e-24 104
Msa0466100 MtrunA17_Chr6g0454391 62.687 67 25 0 363 429 8 74 7.37e-24 96.7
Msa0466100 MtrunA17_Chr2g0283041 24.841 471 284 20 6 450 7 433 8.60e-24 103
Msa0466100 MtrunA17_Chr2g0278741 24.838 463 296 17 6 450 97 525 1.12e-23 104
Msa0466100 MtrunA17_Chr5g0431431 29.804 255 151 8 179 429 113 343 2.98e-23 100
Msa0466100 MtrunA17_Chr4g0040711 24.848 495 302 20 6 474 8 458 7.19e-23 101
Msa0466100 MtrunA17_Chr6g0454381 34.058 138 91 0 124 261 3 140 9.79e-23 94.0
Msa0466100 MtrunA17_Chr7g0231631 28.346 254 173 6 224 473 11 259 2.72e-22 96.7
Msa0466100 MtrunA17_Chr5g0427571 31.718 227 145 6 223 442 45 268 3.68e-22 96.7
Msa0466100 MtrunA17_Chr8g0357361 29.858 211 138 6 208 416 49 251 4.00e-21 93.2
Msa0466100 MtrunA17_Chr4g0066141 37.580 157 81 4 334 473 195 351 7.83e-21 94.0
Msa0466100 MtrunA17_Chr7g0250021 26.879 346 209 12 6 343 12 321 8.74e-21 93.2
Msa0466100 MtrunA17_Chr3g0092031 30.588 170 108 4 282 445 5 170 1.40e-20 89.7
Msa0466100 MtrunA17_Chr2g0319751 22.863 503 318 18 1 476 478 937 1.44e-19 92.4
Msa0466100 MtrunA17_Chr2g0319751 22.449 490 298 19 6 475 8 435 3.28e-17 84.7
Msa0466100 MtrunA17_Chr2g0319791 24.893 466 291 19 1 444 1 429 5.55e-19 89.4
Msa0466100 MtrunA17_Chr2g0319731 22.863 468 286 17 6 444 25 446 1.37e-18 88.2
Msa0466100 MtrunA17_Chr2g0319801 24.242 462 287 17 6 444 8 429 6.75e-18 85.9
Msa0466100 MtrunA17_Chr2g0319761 29.208 202 133 5 282 474 258 458 6.78e-18 85.9
Msa0466100 MtrunA17_Chr4g0039881 28.085 235 153 7 222 450 191 415 1.12e-17 85.1
Msa0466100 MtrunA17_Chr7g0243731 45.588 68 36 1 350 416 6 73 5.57e-15 70.1
Msa0466100 MtrunA17_Chr1g0207911 26.378 254 160 7 7 251 9 244 8.96e-13 68.6
Msa0466100 MtrunA17_Chr2g0321331 29.012 162 90 5 291 444 94 238 9.13e-12 65.5
Msa0466100 MtrunA17_Chr7g0267931 67.568 37 11 1 11 46 25 61 1.14e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0466100 AT1G22380.1 50.844 474 231 2 2 474 9 481 0.0 523
Msa0466100 AT1G22360.1 49.260 473 238 2 3 474 7 478 5.29e-178 508
Msa0466100 AT1G22400.1 48.312 474 242 3 3 474 10 482 1.38e-175 502
Msa0466100 AT1G22340.1 47.689 476 248 1 3 477 10 485 5.62e-175 500
Msa0466100 AT1G22370.2 49.894 473 230 3 3 474 10 476 3.09e-172 493
Msa0466100 AT1G22360.2 47.780 473 233 3 3 474 7 466 3.15e-169 485
Msa0466100 AT1G78270.1 46.347 479 253 4 3 479 10 486 5.64e-159 460
Msa0466100 AT1G22370.1 48.684 304 154 2 172 474 4 306 6.60e-101 305
Msa0466100 AT3G46660.1 36.831 486 261 14 1 473 6 458 5.39e-88 277
Msa0466100 AT5G59590.1 35.699 479 264 13 3 473 7 449 4.41e-86 271
Msa0466100 AT5G59580.1 35.146 478 273 12 4 477 7 451 3.01e-84 267
Msa0466100 AT3G46690.1 36.364 473 266 10 3 471 6 447 4.88e-84 266
Msa0466100 AT3G46650.1 34.511 481 254 11 1 475 5 430 6.53e-84 266
Msa0466100 AT2G36970.1 31.481 486 296 10 3 473 7 470 9.22e-84 267
Msa0466100 AT3G11340.1 34.316 475 276 9 2 474 5 445 2.28e-83 265
Msa0466100 AT3G46670.1 34.855 482 273 13 1 476 1 447 2.52e-83 265
Msa0466100 AT3G46680.1 35.000 480 265 11 1 470 4 446 2.92e-83 264
Msa0466100 AT5G38010.1 34.864 479 274 11 2 473 6 453 3.40e-83 264
Msa0466100 AT5G38040.1 34.968 469 259 13 14 473 18 449 3.48e-80 256
Msa0466100 AT3G46700.1 33.684 475 275 10 3 473 6 444 3.60e-78 251
Msa0466100 AT3G21560.1 31.288 489 289 12 5 473 11 472 2.66e-76 248
Msa0466100 AT5G05880.1 32.909 471 277 11 6 470 8 445 3.77e-75 243
Msa0466100 AT2G28080.1 33.122 474 285 10 10 474 22 472 8.21e-75 243
Msa0466100 AT3G46720.1 32.851 484 263 10 3 473 6 440 1.02e-72 237
Msa0466100 AT5G05890.1 32.421 475 278 11 6 470 8 449 1.17e-72 237
Msa0466100 AT3G55710.1 32.049 493 274 18 6 478 8 459 1.33e-71 234
Msa0466100 AT4G15480.1 31.405 484 292 13 6 473 19 478 2.90e-70 232
Msa0466100 AT4G15500.1 30.722 485 292 12 5 474 8 463 5.19e-70 231
Msa0466100 AT5G05870.1 30.947 475 293 9 6 473 8 454 1.02e-69 229
Msa0466100 AT4G15490.1 31.622 487 288 14 6 474 8 467 1.05e-69 230
Msa0466100 AT5G05900.1 30.737 475 281 11 6 470 8 444 1.72e-69 228
Msa0466100 AT5G05860.1 32.700 474 280 10 6 474 9 448 1.26e-67 224
Msa0466100 AT3G55700.1 29.691 485 292 14 6 478 8 455 1.68e-67 224
Msa0466100 AT2G26480.1 31.799 478 284 12 3 474 5 446 3.44e-67 223
Msa0466100 AT2G31750.1 30.849 483 291 15 4 475 6 456 3.58e-63 212
Msa0466100 AT2G31750.2 30.849 483 291 15 4 475 6 456 1.26e-62 211
Msa0466100 AT3G02100.1 31.120 482 286 15 4 471 11 460 2.19e-62 210
Msa0466100 AT1G05675.1 29.079 478 302 11 1 470 1 449 9.11e-61 206
Msa0466100 AT1G05680.1 30.149 471 290 12 1 462 1 441 6.14e-60 203
Msa0466100 AT2G43820.1 29.253 482 291 15 3 473 4 446 1.22e-58 200
Msa0466100 AT5G17050.1 27.917 480 303 13 6 475 12 458 1.48e-57 197
Msa0466100 AT2G43840.2 28.033 478 296 13 6 473 7 446 7.42e-57 195
Msa0466100 AT2G43840.1 28.033 478 296 13 6 473 7 446 1.67e-56 194
Msa0466100 AT2G30140.1 30.123 488 288 14 2 477 9 455 1.06e-55 192
Msa0466100 AT2G30140.2 30.123 488 287 14 2 477 9 454 1.36e-55 192
Msa0466100 AT2G31790.1 29.787 470 291 12 3 462 5 445 2.71e-55 191
Msa0466100 AT5G17040.1 27.521 476 298 11 6 474 5 440 6.30e-55 190
Msa0466100 AT4G15550.1 29.209 493 292 15 5 472 12 472 1.23e-54 190
Msa0466100 AT4G34131.1 29.980 507 285 16 3 473 7 479 1.83e-54 190
Msa0466100 AT2G36750.1 32.072 502 283 18 6 475 10 485 3.07e-54 189
Msa0466100 AT2G36800.1 31.076 502 290 18 6 475 12 489 2.40e-53 187
Msa0466100 AT1G30530.1 27.004 474 307 11 6 474 12 451 2.54e-53 186
Msa0466100 AT1G24100.1 29.032 496 280 15 4 473 9 458 4.37e-52 183
Msa0466100 AT2G30150.2 29.019 479 290 13 6 473 13 452 1.44e-51 181
Msa0466100 AT2G15490.3 27.812 489 314 10 6 473 7 477 1.54e-51 182
Msa0466100 AT2G15480.1 27.677 495 317 11 1 473 5 480 3.69e-51 181
Msa0466100 AT5G17040.2 32.248 307 191 4 170 474 47 338 5.44e-51 177
Msa0466100 AT1G05560.1 27.490 502 289 15 5 479 4 457 5.92e-51 180
Msa0466100 AT3G53160.1 30.297 505 293 17 6 477 8 486 1.44e-50 179
Msa0466100 AT1G05560.2 27.490 502 289 15 5 479 54 507 1.51e-50 180
Msa0466100 AT1G05530.1 27.510 498 289 16 4 474 3 455 2.88e-50 178
Msa0466100 AT2G15490.1 27.846 492 313 11 6 473 7 480 3.24e-50 178
Msa0466100 AT4G14090.1 29.132 484 290 16 3 472 10 454 1.18e-49 176
Msa0466100 AT2G30150.1 28.632 475 289 13 10 473 1 436 2.19e-49 175
Msa0466100 AT2G23250.1 28.270 474 292 16 9 473 1 435 3.11e-49 174
Msa0466100 AT2G15480.2 27.327 505 316 12 1 473 5 490 3.18e-49 176
Msa0466100 AT2G23260.1 27.366 486 299 18 3 473 7 453 4.07e-49 175
Msa0466100 AT2G36770.1 29.116 498 306 15 6 476 14 491 5.34e-49 175
Msa0466100 AT2G36780.1 30.237 506 288 16 6 475 14 490 1.11e-48 174
Msa0466100 AT4G01070.1 27.016 496 282 13 3 462 5 456 3.44e-48 173
Msa0466100 AT5G26310.1 28.008 507 282 19 4 472 5 466 6.90e-48 172
Msa0466100 AT5G37950.1 32.800 375 214 12 22 391 2 343 7.96e-47 166
Msa0466100 AT4G34135.1 28.600 507 293 13 3 473 8 481 9.51e-47 169
Msa0466100 AT2G36760.1 28.968 504 299 17 6 476 14 491 1.60e-46 169
Msa0466100 AT5G17030.1 29.801 302 197 3 175 475 170 457 1.67e-46 168
Msa0466100 AT5G66690.1 27.579 504 288 18 4 472 5 466 2.57e-46 168
Msa0466100 AT1G10400.1 31.000 500 281 20 3 476 4 465 4.64e-46 167
Msa0466100 AT5G37950.2 31.551 374 214 10 22 391 2 337 9.71e-46 163
Msa0466100 AT3G22250.1 27.056 462 285 13 3 443 5 435 3.40e-45 164
Msa0466100 AT4G36770.1 29.412 476 282 17 6 458 4 448 4.46e-45 164
Msa0466100 AT1G01420.1 28.270 474 275 15 5 450 7 443 1.26e-44 163
Msa0466100 AT1G01420.2 28.270 474 275 15 5 450 10 446 1.44e-44 163
Msa0466100 AT4G34138.1 27.756 508 291 15 4 473 9 478 1.67e-44 163
Msa0466100 AT3G53150.1 27.930 512 313 15 3 476 19 512 1.94e-44 163
Msa0466100 AT5G14860.1 27.723 505 291 17 6 473 8 475 8.57e-42 155
Msa0466100 AT2G16890.2 27.579 504 284 17 6 473 9 467 1.33e-41 155
Msa0466100 AT1G01390.1 28.980 490 284 17 5 466 7 460 1.61e-41 154
Msa0466100 AT1G01390.2 28.980 490 284 17 5 466 24 477 2.03e-41 155
Msa0466100 AT2G18570.1 26.590 519 278 19 1 471 1 464 2.26e-41 154
Msa0466100 AT3G50740.1 27.063 521 281 19 4 475 5 475 2.96e-41 154
Msa0466100 AT3G16520.3 31.579 323 190 10 162 471 153 457 1.04e-37 144
Msa0466100 AT5G03490.1 28.343 501 277 22 2 473 15 462 2.35e-37 143
Msa0466100 AT2G29710.1 25.918 490 317 16 3 474 2 463 2.89e-37 142
Msa0466100 AT2G36790.1 35.273 275 148 8 223 475 223 489 2.96e-36 140
Msa0466100 AT3G16520.1 32.808 317 176 11 162 459 153 451 1.24e-35 138
Msa0466100 AT3G16520.2 31.922 307 178 10 162 455 153 441 1.56e-35 137
Msa0466100 AT3G21790.1 26.786 504 308 16 4 473 2 478 2.10e-35 138
Msa0466100 AT2G29730.1 24.174 484 327 16 6 474 5 463 2.07e-34 135
Msa0466100 AT2G18560.1 29.934 304 162 10 201 471 89 374 2.75e-34 132
Msa0466100 AT1G51210.1 26.754 456 280 14 4 447 18 431 1.30e-33 132
Msa0466100 AT1G73880.1 26.543 486 312 14 4 474 12 467 3.47e-33 131
Msa0466100 AT5G12890.1 26.747 501 283 20 6 462 10 470 4.97e-33 131
Msa0466100 AT5G65550.1 26.957 460 298 15 4 451 7 440 7.89e-33 130
Msa0466100 AT3G21750.1 23.684 494 332 13 4 476 2 471 3.34e-32 129
Msa0466100 AT3G21780.1 26.087 506 309 19 4 478 2 473 4.32e-32 128
Msa0466100 AT5G49690.1 26.754 456 280 18 6 445 10 427 1.17e-31 127
Msa0466100 AT1G07240.1 27.198 364 223 11 131 474 135 476 1.47e-31 127
Msa0466100 AT4G15260.1 28.328 293 173 6 209 478 81 359 1.80e-31 124
Msa0466100 AT3G21800.1 31.673 281 154 8 223 478 213 480 3.55e-31 125
Msa0466100 AT1G07250.1 24.063 507 326 14 1 478 1 477 4.06e-31 125
Msa0466100 AT4G15280.1 23.518 506 323 13 4 476 2 476 4.96e-31 125
Msa0466100 AT3G21760.1 24.554 505 320 16 4 473 2 480 5.90e-31 125
Msa0466100 AT4G15280.2 23.913 506 321 14 4 476 34 508 5.98e-31 125
Msa0466100 AT2G29750.1 24.900 502 319 17 6 479 8 479 1.72e-30 124
Msa0466100 AT2G29740.1 31.250 256 145 9 223 463 225 464 1.93e-30 124
Msa0466100 AT2G16890.3 26.144 459 259 17 6 429 9 422 1.99e-30 122
Msa0466100 AT1G07260.1 30.597 268 155 8 223 474 220 472 4.52e-30 122
Msa0466100 AT4G27560.1 24.089 494 301 17 4 474 5 447 5.47e-27 113
Msa0466100 AT4G27570.1 24.406 463 291 14 4 450 5 424 7.63e-27 113
Msa0466100 AT2G22590.1 26.105 475 281 18 4 449 13 446 6.85e-26 110
Msa0466100 AT5G54010.1 23.838 495 312 20 1 476 1 449 1.57e-25 109
Msa0466100 AT5G53990.1 23.758 463 295 15 1 450 1 418 3.97e-25 108
Msa0466100 AT1G64910.1 24.675 462 280 18 1 444 1 412 7.25e-24 104
Msa0466100 AT3G29630.1 23.918 439 268 13 1 426 1 386 7.63e-22 98.2
Msa0466100 AT5G54060.1 24.034 466 306 16 7 455 14 448 1.46e-21 97.8
Msa0466100 AT4G34135.2 26.571 350 201 10 3 327 8 326 5.79e-21 94.4
Msa0466100 AT1G64920.1 22.312 493 316 19 1 472 1 447 4.63e-20 92.8
Msa0466100 AT2G22930.1 23.158 475 283 18 1 450 1 418 6.15e-20 92.4
Msa0466100 AT3G29630.2 23.059 438 247 13 1 426 1 360 1.54e-19 91.3
Msa0466100 AT1G06000.1 27.612 268 165 12 223 473 178 433 6.07e-19 89.4
Msa0466100 AT4G09500.2 21.245 466 303 15 1 450 1 418 4.57e-18 87.0
Msa0466100 AT1G50580.1 22.440 459 295 15 1 444 1 413 4.30e-17 84.0
Msa0466100 AT4G09500.1 25.714 175 123 3 283 450 219 393 1.58e-16 82.0
Msa0466100 AT4G01070.2 22.427 379 219 11 3 350 5 339 4.76e-14 73.9

Find 113 sgRNAs with CRISPR-Local

Find 370 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCAAGTGGTTCGAGTTTA+TGG 0.083284 3_3:+66661054 Msa0466100:CDS
TTATGCAACACTTGGAAAAT+AGG 0.198741 3_3:+66661470 Msa0466100:CDS
AAATTAACCATGATGTTAAA+AGG 0.220501 3_3:+66661498 Msa0466100:CDS
GTTGCATCTTTATCTGATTC+TGG 0.253266 3_3:-66655627 None:intergenic
ACTATTTGTTGGCCTTTCTT+TGG 0.270197 3_3:+66661422 Msa0466100:CDS
TGGAAGAGTGGCTAAGGATT+TGG 0.280456 3_3:+66655788 Msa0466100:CDS
GATGTTGACTATTCTGAATT+TGG 0.290100 3_3:+66661784 Msa0466100:three_prime_UTR
AATCAACACATTTGAAGAAT+TGG 0.298250 3_3:+66660926 Msa0466100:CDS
GCATAACATGGTTGAATAGA+TGG 0.304278 3_3:+66661093 Msa0466100:CDS
CATCATTTCCATCACAAGTT+TGG 0.304396 3_3:-66661531 None:intergenic
CTAATACAACATGTGGCTTT+TGG 0.304454 3_3:-66655419 None:intergenic
CTTGGAGCTGACTTTGTTAA+GGG 0.310099 3_3:+66655564 Msa0466100:CDS
TATGCAACACTTGGAAAATA+GGG 0.331166 3_3:+66661471 Msa0466100:CDS
GGACCAATGTCATATATGTT+TGG 0.332878 3_3:-66660984 None:intergenic
TATCTTTGATTATGTTCCTT+TGG 0.343696 3_3:+66661932 Msa0466100:three_prime_UTR
GACCAATGTCATATATGTTT+GGG 0.345790 3_3:-66660983 None:intergenic
TCTTGGAGCTGACTTTGTTA+AGG 0.346942 3_3:+66655563 Msa0466100:CDS
GAAATGATGGAAGGAGAAAA+AGG 0.359746 3_3:+66661545 Msa0466100:CDS
ACCGTTGCAACGTAGGAGTT+TGG 0.360613 3_3:-66655487 None:intergenic
CTAGATGAAGTTAAGGATAG+AGG 0.360667 3_3:+66661284 Msa0466100:CDS
TGCTTCTACTTGTGGGTTTG+TGG 0.362942 3_3:+66655836 Msa0466100:CDS
GATGGCAATTATGACTTTGC+TGG 0.363761 3_3:+66655768 Msa0466100:CDS
TCAGTCCTATATGTTAATTA+TGG 0.370543 3_3:+66661125 Msa0466100:CDS
GGAAGAGTGGCTAAGGATTT+GGG 0.372307 3_3:+66655789 Msa0466100:CDS
TCAGCAATTATACAAGTAAC+TGG 0.373014 3_3:-66655747 None:intergenic
TTTGGACTGCTTCTACTTGT+GGG 0.381446 3_3:+66655829 Msa0466100:CDS
CTTTGGAAACAAGTTTAGAT+TGG 0.385572 3_3:+66660775 Msa0466100:CDS
ATGGTCTCAAATTGAAAATC+AGG 0.386462 3_3:-66655591 None:intergenic
TCTTCACCCATTACTACATC+TGG 0.399736 3_3:-66661236 None:intergenic
GTGAGCAACAAACAAATTGT+AGG 0.402362 3_3:+66661444 Msa0466100:CDS
TATTTGAGCTATATTATAAT+CGG 0.403176 3_3:+66661688 Msa0466100:exon
CTTTGGACTGCTTCTACTTG+TGG 0.406475 3_3:+66655828 Msa0466100:CDS
GCTTCTACTTGTGGGTTTGT+GGG 0.409693 3_3:+66655837 Msa0466100:CDS
CAGGTGTGCCTACTATTTGT+TGG 0.410855 3_3:+66661411 Msa0466100:CDS
GGGTTTAATTTACCTTTGAA+TGG 0.413029 3_3:-66655900 None:intergenic
GTGAAGCACTGGACACCCTT+AGG 0.413581 3_3:+66660952 Msa0466100:CDS
TCTGATTCTGGTAAACCATC+AGG 0.441558 3_3:-66655615 None:intergenic
CACTTCCATAATTAACATAT+AGG 0.451185 3_3:-66661130 None:intergenic
CTGATGGATGATCAAGAACT+TGG 0.453339 3_3:-66661334 None:intergenic
TCTGTGATTCTTATGAAGCT+TGG 0.465282 3_3:-66660834 None:intergenic
ACAAGTTTAGATTGGATCTC+GGG 0.469911 3_3:+66660783 Msa0466100:CDS
GTTTGTTGCTCACCAAAGAA+AGG 0.473094 3_3:-66661434 None:intergenic
CAAACTTGTGATGGAAATGA+TGG 0.476926 3_3:+66661532 Msa0466100:CDS
AATTCCAACCACAATGAGTC+AGG 0.479825 3_3:-66661367 None:intergenic
AAACGTTTGATAAAGTCTCT+TGG 0.482925 3_3:+66655546 Msa0466100:CDS
GATGTAATGTTTAATTTCCA+AGG 0.484094 3_3:+66660864 Msa0466100:CDS
AACAAGTTTAGATTGGATCT+CGG 0.488590 3_3:+66660782 Msa0466100:CDS
ACATGACCTTGTGCTGGAAA+TGG 0.488947 3_3:-66655444 None:intergenic
ATGAGGCCAGATGTAGTAAT+GGG 0.489308 3_3:+66661230 Msa0466100:CDS
CCCATGCAAATTCTTTCAAG+TGG 0.489947 3_3:-66661172 None:intergenic
GAGACTTTATCAAACGTTTG+TGG 0.490628 3_3:-66655542 None:intergenic
AATTAACCATGATGTTAAAA+GGG 0.491706 3_3:+66661499 Msa0466100:CDS
CTTGATCATCCATCAGTTGG+AGG 0.492019 3_3:+66661341 Msa0466100:CDS
CACTTTCCTGAGATGGAACA+TGG 0.494914 3_3:+66661026 Msa0466100:CDS
GGTTCCTGACTCATTGTGGT+TGG 0.497226 3_3:+66661363 Msa0466100:CDS
GTAAAACCATGTTCCATCTC+AGG 0.499581 3_3:-66661032 None:intergenic
ATACAAGTAACTGGAATATG+AGG 0.502466 3_3:-66655738 None:intergenic
ACCACTTGAAAGAATTTGCA+TGG 0.503004 3_3:+66661171 Msa0466100:CDS
TGGTAGGCACTTTCCTGAGA+TGG 0.504695 3_3:+66661019 Msa0466100:CDS
ACACTTGAAACTATTTCAGC+AGG 0.509242 3_3:+66661392 Msa0466100:CDS
AATGAGGCCAGATGTAGTAA+TGG 0.509860 3_3:+66661229 Msa0466100:CDS
AAGAAAGGCCAACAAATAGT+AGG 0.513282 3_3:-66661419 None:intergenic
AGTTTGGCTAGTTGCATGAA+AGG 0.517620 3_3:-66655471 None:intergenic
GTTCTTGATCATCCATCAGT+TGG 0.519116 3_3:+66661338 Msa0466100:CDS
TGAAGCACTGGACACCCTTA+GGG 0.522110 3_3:+66660953 Msa0466100:CDS
AGAGGAATTCTTCCATTCAA+AGG 0.528099 3_3:+66655888 Msa0466100:CDS
GGGTTCACATGACCTTGTGC+TGG 0.530108 3_3:-66655450 None:intergenic
ATTGGTCCACTTCACATGCT+TGG 0.530255 3_3:+66660999 Msa0466100:CDS
TTGATCATCCATCAGTTGGA+GGG 0.530662 3_3:+66661342 Msa0466100:CDS
TGTGGGATATTTGCAATTCG+AGG 0.531454 3_3:+66655854 Msa0466100:CDS
AGAGATGAGACAAAACTGCT+TGG 0.532493 3_3:+66661571 Msa0466100:CDS
CACAGGATGTTCTAACGTTG+TGG 0.532549 3_3:+66655649 Msa0466100:CDS
CTTTGCTGGAAGAGTGGCTA+AGG 0.536699 3_3:+66655782 Msa0466100:CDS
TTCGAGGAGCTTGTCAAAAG+AGG 0.537426 3_3:+66655870 Msa0466100:CDS
AGAGATAACCAAACTTGTGA+TGG 0.538882 3_3:+66661523 Msa0466100:CDS
TGATTCTTATGAAGCTTGGA+AGG 0.539095 3_3:-66660830 None:intergenic
AAGTAGAAGCAGTCCAAAGT+TGG 0.540479 3_3:-66655824 None:intergenic
GTCAGGAACCCTCCAACTGA+TGG 0.542338 3_3:-66661350 None:intergenic
TTCTGGTAAACCATCAGGTA+TGG 0.543800 3_3:-66655610 None:intergenic
ATAGAGGATACATAACTAGT+TGG 0.545228 3_3:+66661300 Msa0466100:CDS
AGCTACAGATGCTACTAATG+TGG 0.548442 3_3:+66661607 Msa0466100:CDS
GCATTCGAGAGATCCAACTT+TGG 0.550641 3_3:+66655811 Msa0466100:CDS
GTTACTTGTATAATTGCTGA+TGG 0.554672 3_3:+66655750 Msa0466100:CDS
GTTTGGCTAGTTGCATGAAA+GGG 0.555128 3_3:-66655470 None:intergenic
AGAATTGGAAGGTGAAGCAC+TGG 0.555737 3_3:+66660941 Msa0466100:CDS
CCACTTGAAAGAATTTGCAT+GGG 0.559901 3_3:+66661172 Msa0466100:CDS
GTAGGTATTTATGCAACACT+TGG 0.560031 3_3:+66661462 Msa0466100:CDS
ATCAGATAAAGATGCAACAC+AGG 0.561391 3_3:+66655632 Msa0466100:CDS
AACCCAAACATATATGACAT+TGG 0.565039 3_3:+66660981 Msa0466100:CDS
GCCAAACTCCTACGTTGCAA+CGG 0.566590 3_3:+66655486 Msa0466100:CDS
TTATGACTTTGCTGGAAGAG+TGG 0.569942 3_3:+66655776 Msa0466100:CDS
CAATTTGAGACCATACCTGA+TGG 0.571463 3_3:+66655600 Msa0466100:CDS
TATTGAGGTTCTTGTTGACA+AGG 0.577723 3_3:+66661883 Msa0466100:three_prime_UTR
CAACACTTGGAAAATAGGGA+TGG 0.580082 3_3:+66661475 Msa0466100:CDS
AACACATTTGAAGAATTGGA+AGG 0.580993 3_3:+66660930 Msa0466100:CDS
GCTACAGATGCTACTAATGT+GGG 0.582080 3_3:+66661608 Msa0466100:CDS
TGCCTACCAAGCATGTGAAG+TGG 0.583854 3_3:-66661005 None:intergenic
TTAATCACGAGCTCTTTGAA+AGG 0.592339 3_3:-66655699 None:intergenic
ACAGGATGTTCTAACGTTGT+GGG 0.594620 3_3:+66655650 Msa0466100:CDS
AATGGTACTAATACAACATG+TGG 0.596910 3_3:-66655426 None:intergenic
GTCCACTTCACATGCTTGGT+AGG 0.602957 3_3:+66661003 Msa0466100:CDS
GGAGGGTTCCTGACTCATTG+TGG 0.605368 3_3:+66661359 Msa0466100:CDS
TTAACATATAGGACTGAGCA+AGG 0.608706 3_3:-66661119 None:intergenic
TGTGAAAACCGTTGCAACGT+AGG 0.610448 3_3:-66655494 None:intergenic
TGAGACAAAACTGCTTGGAG+TGG 0.611958 3_3:+66661576 Msa0466100:CDS
CTGACATAGAATGCATAACA+TGG 0.624105 3_3:+66661081 Msa0466100:CDS
ACTTCATCTAGAAAATCTTG+TGG 0.626314 3_3:-66661272 None:intergenic
TTAGTACCATTTCCAGCACA+AGG 0.640576 3_3:+66655438 Msa0466100:CDS
CAATCAAATGAGCAATCCAA+AGG 0.640979 3_3:-66661948 None:intergenic
CTTGTGATGGAAATGATGGA+AGG 0.651161 3_3:+66661536 Msa0466100:CDS
CACTTGAAAGAATTTGCATG+GGG 0.652156 3_3:+66661173 Msa0466100:CDS
GTTGAATTCAGTGTTCACAA+AGG 0.652579 3_3:-66655520 None:intergenic
ACAGATGCTACTAATGTGGG+AGG 0.700783 3_3:+66661611 Msa0466100:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAATATATTATAAAT+AGG - chr3_3:66655994-66656013 None:intergenic 0.0%
!!! TTTATAATATATTTTTTTTT+AGG + chr3_3:66655995-66656014 Msa0466100:intron 0.0%
!!! AAATATAAATAAATTATTTT+TGG - chr3_3:66656476-66656495 None:intergenic 0.0%
!!! TTATTTAATTATATTTTATT+TGG - chr3_3:66659391-66659410 None:intergenic 0.0%
!!! TTTTTCATGTTTTAATATAT+TGG - chr3_3:66657042-66657061 None:intergenic 10.0%
!! ATACTAAAATAAAGAAATAA+AGG - chr3_3:66657576-66657595 None:intergenic 10.0%
!!! AAAATATATATTGCTATTTT+TGG + chr3_3:66657616-66657635 Msa0466100:intron 10.0%
!!! TTTCTTATTTATTAAAGTTA+GGG - chr3_3:66659171-66659190 None:intergenic 10.0%
!!! ATTTCTTATTTATTAAAGTT+AGG - chr3_3:66659172-66659191 None:intergenic 10.0%
!! TATATATATTATGTGAAAAT+TGG - chr3_3:66659245-66659264 None:intergenic 10.0%
!! AAAATAAACAAAAAATACTA+TGG - chr3_3:66659335-66659354 None:intergenic 10.0%
!! TAGATAAAATATTATGTTAA+TGG - chr3_3:66659640-66659659 None:intergenic 10.0%
!! AAACATAGAGAAAAAAAAAT+GGG - chr3_3:66655923-66655942 None:intergenic 15.0%
!!! TGAACTACTTTTTTTTTTTA+AGG - chr3_3:66656636-66656655 None:intergenic 15.0%
!! AAAAAAAAAGTAGTTCAAAT+CGG + chr3_3:66656639-66656658 Msa0466100:intron 15.0%
!! TTATACATTCATAAAATTCA+TGG + chr3_3:66656682-66656701 Msa0466100:intron 15.0%
!!! ACTTATTTTATGTAGAATTA+TGG - chr3_3:66656875-66656894 None:intergenic 15.0%
!! AATATTGAATTTAACTAGAT+TGG + chr3_3:66657752-66657771 Msa0466100:intron 15.0%
!!! TTTTGTAGTTTATTTAGTTA+GGG - chr3_3:66658379-66658398 None:intergenic 15.0%
!! ATATTTACAATGCAAAATAA+AGG + chr3_3:66658637-66658656 Msa0466100:intron 15.0%
!!! TATTAGATGATTATTTTAGT+TGG - chr3_3:66658960-66658979 None:intergenic 15.0%
!! ATAATCATCTAATAACTTTA+AGG + chr3_3:66658966-66658985 Msa0466100:intron 15.0%
!!! ATTTGAAATTCAAATTGTTT+TGG - chr3_3:66660410-66660429 None:intergenic 15.0%
!!! ATTAGATGAAAATTTTATTG+CGG + chr3_3:66660746-66660765 Msa0466100:intron 15.0%
!! TATTTGAGCTATATTATAAT+CGG + chr3_3:66661688-66661707 Msa0466100:exon 15.0%
!! GAAAATTATGAAGAAAAAAA+AGG - chr3_3:66661843-66661862 None:intergenic 15.0%
!! CACAGAAAAACAAATTAAAA+TGG + chr3_3:66655395-66655414 Msa0466100:exon 20.0%
!! GAAACATAGAGAAAAAAAAA+TGG - chr3_3:66655924-66655943 None:intergenic 20.0%
!! TTAATTATAATAGTCATCAG+TGG - chr3_3:66656179-66656198 None:intergenic 20.0%
!!! AAATTTCTTCTAAAGAGTAT+TGG + chr3_3:66656416-66656435 Msa0466100:intron 20.0%
!!! ATTATTTTTGGAACATTCTT+AGG - chr3_3:66656464-66656483 None:intergenic 20.0%
!! TTAATGCGATATGAATATTT+AGG + chr3_3:66657544-66657563 Msa0466100:intron 20.0%
!! TAAGATTAGCAACTATATTT+CGG - chr3_3:66657807-66657826 None:intergenic 20.0%
!!! ATTTCCTTTATGTTTTGTTT+CGG - chr3_3:66657844-66657863 None:intergenic 20.0%
!! TTAATTAAAATGCAACACAA+TGG + chr3_3:66657902-66657921 Msa0466100:intron 20.0%
!! AATATAGAAAACTCACATTT+AGG - chr3_3:66657948-66657967 None:intergenic 20.0%
!! TATATTACACATTGCAAAAT+AGG + chr3_3:66657962-66657981 Msa0466100:intron 20.0%
!!! AATAGGATTAATTGTAGTTT+TGG + chr3_3:66657979-66657998 Msa0466100:intron 20.0%
!! TTTGTAGTTTATTTAGTTAG+GGG - chr3_3:66658380-66658399 None:intergenic 20.0%
!!! GTTTTGTAGTTTATTTAGTT+AGG - chr3_3:66658378-66658397 None:intergenic 20.0%
!! AAAATAAATAAATACACACG+TGG + chr3_3:66658279-66658298 Msa0466100:intron 20.0%
!!! GTTTTGTAGTTTATTTAGTT+AGG + chr3_3:66658378-66658397 Msa0466100:intron 20.0%
!! ATATTAATCACATATGAAGA+CGG - chr3_3:66658507-66658526 None:intergenic 20.0%
!!! TTTTGCAAAATAAATGGTTA+CGG - chr3_3:66658736-66658755 None:intergenic 20.0%
!!! CCTTTATTTTGCAAAATAAA+TGG - chr3_3:66658742-66658761 None:intergenic 20.0%
!!! CCATTTATTTTGCAAAATAA+AGG + chr3_3:66658739-66658758 Msa0466100:intron 20.0%
!!! TTTTATGTATGTTCACATAA+TGG - chr3_3:66659205-66659224 None:intergenic 20.0%
!!! ATAAGGTTGTTTTTATATGT+CGG - chr3_3:66659443-66659462 None:intergenic 20.0%
!! ATTAAGTATTAACATGATGT+TGG - chr3_3:66659918-66659937 None:intergenic 20.0%
!! AATGGAAAGAATACAAAAAA+AGG + chr3_3:66660176-66660195 Msa0466100:intron 20.0%
!! TTTCAAATTTCACAATTAGA+TGG + chr3_3:66660422-66660441 Msa0466100:intron 20.0%
!! TATTAATTACATGGAATTAG+AGG + chr3_3:66660472-66660491 Msa0466100:intron 20.0%
!! ATTAATTACATGGAATTAGA+GGG + chr3_3:66660473-66660492 Msa0466100:intron 20.0%
!!! ATAGTAAGTTACCATTTTTA+TGG + chr3_3:66661204-66661223 Msa0466100:CDS 20.0%
!! AAATTAACCATGATGTTAAA+AGG + chr3_3:66661498-66661517 Msa0466100:CDS 20.0%
!! AATTAACCATGATGTTAAAA+GGG + chr3_3:66661499-66661518 Msa0466100:CDS 20.0%
! AGAAAGAAATACAAAGATTG+AGG + chr3_3:66656044-66656063 Msa0466100:intron 25.0%
! GAAAGAAATACAAAGATTGA+GGG + chr3_3:66656045-66656064 Msa0466100:intron 25.0%
! TAAATGGTGAGCTAATAAAT+GGG + chr3_3:66656563-66656582 Msa0466100:intron 25.0%
! AATACCGAAACAAAACATAA+AGG + chr3_3:66657837-66657856 Msa0466100:intron 25.0%
! TTGTAGTTTATTTAGTTAGG+GGG - chr3_3:66658381-66658400 None:intergenic 25.0%
! TGCAAAAAAGTCAATACTTA+GGG - chr3_3:66658351-66658370 None:intergenic 25.0%
!!! TATTGACTTTTTTGCAGTTT+TGG + chr3_3:66658070-66658089 Msa0466100:intron 25.0%
!!! TATTGACTTTTTTGCAGTTT+TGG - chr3_3:66658070-66658089 None:intergenic 25.0%
! TTGTAGTTTATTTAGTTAGG+TGG + chr3_3:66658381-66658400 Msa0466100:intron 25.0%
!! CGAACAACATTTAAAACAAA+TGG + chr3_3:66658553-66658572 Msa0466100:intron 25.0%
!!! GCAATTTAATTGTTGTTTGT+AGG - chr3_3:66658615-66658634 None:intergenic 25.0%
!!! TTTTGCAAAATAAAGGCATA+TGG + chr3_3:66658746-66658765 Msa0466100:intron 25.0%
!! TTTGCAAAATAAAGGCATAT+GGG + chr3_3:66658747-66658766 Msa0466100:intron 25.0%
! ATAAGCAAAACAAATGGTTA+CGG - chr3_3:66658784-66658803 None:intergenic 25.0%
! GTAAACATAAGCAAAACAAA+TGG - chr3_3:66658790-66658809 None:intergenic 25.0%
!! ACTTTCAAGTATAACTAATG+TGG + chr3_3:66658877-66658896 Msa0466100:intron 25.0%
!! CTTTCAAGTATAACTAATGT+GGG + chr3_3:66658878-66658897 Msa0466100:intron 25.0%
! ACAAGTTAAGAAGCTAAAAA+GGG + chr3_3:66659015-66659034 Msa0466100:intron 25.0%
! ACAAGTTTAGAAACTAAACA+TGG - chr3_3:66659123-66659142 None:intergenic 25.0%
! TGTGAAAATTGGAGTAAATA+AGG - chr3_3:66659234-66659253 None:intergenic 25.0%
!! AAAAATACTATGGTTTGTGT+TGG - chr3_3:66659325-66659344 None:intergenic 25.0%
! CAATTACTTTCGGTATAATA+AGG - chr3_3:66659537-66659556 None:intergenic 25.0%
! CTTATTATACCGAAAGTAAT+TGG + chr3_3:66659535-66659554 Msa0466100:intron 25.0%
! TTTGTTGAACCAATTACTTT+CGG - chr3_3:66659547-66659566 None:intergenic 25.0%
! TAAGACTATACCTTAAAACA+TGG - chr3_3:66659584-66659603 None:intergenic 25.0%
!!! TGTTTTAAGGTATAGTCTTA+AGG + chr3_3:66659584-66659603 Msa0466100:intron 25.0%
!!! GTTTTAAGGTATAGTCTTAA+GGG + chr3_3:66659585-66659604 Msa0466100:intron 25.0%
! TGTCAACTTTGTAAATTCAT+GGG - chr3_3:66659663-66659682 None:intergenic 25.0%
! ATGTCAACTTTGTAAATTCA+TGG - chr3_3:66659664-66659683 None:intergenic 25.0%
! TCACACTAATTACATAAACT+TGG - chr3_3:66659784-66659803 None:intergenic 25.0%
!! ATATCCTTTTCTTCATTGTT+CGG + chr3_3:66659867-66659886 Msa0466100:intron 25.0%
! AAAATATTGAGAAAAACCAC+AGG + chr3_3:66659988-66660007 Msa0466100:intron 25.0%
!! AACAATTATCTACTGTTTTG+TGG - chr3_3:66660042-66660061 None:intergenic 25.0%
!! AAGAAAAAATTGATAACTGC+AGG - chr3_3:66660136-66660155 None:intergenic 25.0%
!!! TGCAGTTATCAATTTTTTCT+TGG + chr3_3:66660135-66660154 Msa0466100:intron 25.0%
! ACAAAAAAAGGAGAAACAAT+AGG + chr3_3:66660188-66660207 Msa0466100:intron 25.0%
! CAAAAAAAGGAGAAACAATA+GGG + chr3_3:66660189-66660208 Msa0466100:intron 25.0%
! AATGCAATTAATATGTCCAT+TGG - chr3_3:66660308-66660327 None:intergenic 25.0%
! ATTAGATGGAGGAAAAAATT+AGG + chr3_3:66660436-66660455 Msa0466100:intron 25.0%
! TTAGATGGAGGAAAAAATTA+GGG + chr3_3:66660437-66660456 Msa0466100:intron 25.0%
! CTTAGCAAGTATTAATTACA+TGG + chr3_3:66660463-66660482 Msa0466100:intron 25.0%
! ACTTACTCTTAAAGCTTATT+AGG - chr3_3:66660526-66660545 None:intergenic 25.0%
!! GATGTAATGTTTAATTTCCA+AGG + chr3_3:66660864-66660883 Msa0466100:CDS 25.0%
! AATCAACACATTTGAAGAAT+TGG + chr3_3:66660926-66660945 Msa0466100:CDS 25.0%
! TCAGTCCTATATGTTAATTA+TGG + chr3_3:66661125-66661144 Msa0466100:CDS 25.0%
! CACTTCCATAATTAACATAT+AGG - chr3_3:66661133-66661152 None:intergenic 25.0%
!!! TACCATTTTTATGGATAATG+AGG + chr3_3:66661213-66661232 Msa0466100:CDS 25.0%
!! AGATTTTCTAGATGAAGTTA+AGG + chr3_3:66661277-66661296 Msa0466100:CDS 25.0%
!! CTTCATAATTTTCAACTGTA+TGG + chr3_3:66661850-66661869 Msa0466100:three_prime_UTR 25.0%
! TATCTTTGATTATGTTCCTT+TGG + chr3_3:66661932-66661951 Msa0466100:three_prime_UTR 25.0%
!! ATTTGTTTTTCTGTGAGAGT+GGG - chr3_3:66655390-66655409 None:intergenic 30.0%
!! AATTTGTTTTTCTGTGAGAG+TGG - chr3_3:66655391-66655410 None:intergenic 30.0%
AATGGTACTAATACAACATG+TGG - chr3_3:66655429-66655448 None:intergenic 30.0%
AAACGTTTGATAAAGTCTCT+TGG + chr3_3:66655546-66655565 Msa0466100:CDS 30.0%
ATGGTCTCAAATTGAAAATC+AGG - chr3_3:66655594-66655613 None:intergenic 30.0%
ATACAAGTAACTGGAATATG+AGG - chr3_3:66655741-66655760 None:intergenic 30.0%
TCAGCAATTATACAAGTAAC+TGG - chr3_3:66655750-66655769 None:intergenic 30.0%
GTTACTTGTATAATTGCTGA+TGG + chr3_3:66655750-66655769 Msa0466100:CDS 30.0%
! GGGTTTAATTTACCTTTGAA+TGG - chr3_3:66655903-66655922 None:intergenic 30.0%
TTCACACCCTTATTAGTAAA+TGG + chr3_3:66656547-66656566 Msa0466100:intron 30.0%
AGCTCACCATTTACTAATAA+GGG - chr3_3:66656556-66656575 None:intergenic 30.0%
TAGCTCACCATTTACTAATA+AGG - chr3_3:66656557-66656576 None:intergenic 30.0%
GTAAATGGTGAGCTAATAAA+TGG + chr3_3:66656562-66656581 Msa0466100:intron 30.0%
! AGTTTAGTTTAGCTACTTCT+TGG - chr3_3:66657237-66657256 None:intergenic 30.0%
AAGAAACTAGGTTATACGAA+CGG - chr3_3:66657667-66657686 None:intergenic 30.0%
AAATGTACACTACCACAAAT+TGG - chr3_3:66657699-66657718 None:intergenic 30.0%
CAAAAAAGTCAATACTTAGG+GGG - chr3_3:66658353-66658372 None:intergenic 30.0%
GCAAAAAAGTCAATACTTAG+GGG - chr3_3:66658352-66658371 None:intergenic 30.0%
CTGCAAAAAAGTCAATACTT+AGG - chr3_3:66658350-66658369 None:intergenic 30.0%
!! AGCTTTGACTTGATCAAAAT+TGG + chr3_3:66658312-66658331 Msa0466100:intron 30.0%
CTGCAAAAAAGTCAATACTT+AGG + chr3_3:66658350-66658369 Msa0466100:intron 30.0%
CAAAAAAGTCAATACTTAGG+AGG + chr3_3:66658353-66658372 Msa0466100:intron 30.0%
!!! TCTATGAGGAAGTATTTTGT+TGG - chr3_3:66658455-66658474 None:intergenic 30.0%
ATGTTTACAACGCAACTTAA+AGG + chr3_3:66658802-66658821 Msa0466100:intron 30.0%
TGTTTACAACGCAACTTAAA+GGG + chr3_3:66658803-66658822 Msa0466100:intron 30.0%
AAACTTCACACATATAGTAG+GGG - chr3_3:66658855-66658874 None:intergenic 30.0%
GAAACTTCACACATATAGTA+GGG - chr3_3:66658856-66658875 None:intergenic 30.0%
TGAAACTTCACACATATAGT+AGG - chr3_3:66658857-66658876 None:intergenic 30.0%
CACAAGTTAAGAAGCTAAAA+AGG + chr3_3:66659014-66659033 Msa0466100:intron 30.0%
TGTATGTTCACATAATGGTT+TGG - chr3_3:66659200-66659219 None:intergenic 30.0%
AATCCAATCATAAGCACAAA+AGG - chr3_3:66659284-66659303 None:intergenic 30.0%
!! TGTCGGTTTACATAATTGTT+TGG - chr3_3:66659426-66659445 None:intergenic 30.0%
ACCTTATCTCAAACATTTGA+TGG + chr3_3:66659456-66659475 Msa0466100:intron 30.0%
! TCCATCAAATGTTTGAGATA+AGG - chr3_3:66659460-66659479 None:intergenic 30.0%
ACTATACCTTAAAACATGGA+TGG - chr3_3:66659580-66659599 None:intergenic 30.0%
AAATAAAGCAGCGAAGAAAA+GGG - chr3_3:66659838-66659857 None:intergenic 30.0%
AAAATAAAGCAGCGAAGAAA+AGG - chr3_3:66659839-66659858 None:intergenic 30.0%
GTCTGAAAATAGCAGTAAAA+TGG - chr3_3:66659896-66659915 None:intergenic 30.0%
TTTGTATTCTTTCCATTGCT+AGG - chr3_3:66660173-66660192 None:intergenic 30.0%
! ATTTTACAACACCAGAAGTT+TGG - chr3_3:66660244-66660263 None:intergenic 30.0%
CAAATTTCACAATTAGATGG+AGG + chr3_3:66660425-66660444 Msa0466100:intron 30.0%
TGGAATTAGAGGGAAAAATT+AGG + chr3_3:66660483-66660502 Msa0466100:intron 30.0%
! GATGAAAATTTTATTGCGGA+TGG + chr3_3:66660750-66660769 Msa0466100:intron 30.0%
! CTTTGGAAACAAGTTTAGAT+TGG + chr3_3:66660775-66660794 Msa0466100:CDS 30.0%
AACAAGTTTAGATTGGATCT+CGG + chr3_3:66660782-66660801 Msa0466100:CDS 30.0%
!!! AATTTTGTGCTTTAGAACCT+TGG - chr3_3:66660884-66660903 None:intergenic 30.0%
AACACATTTGAAGAATTGGA+AGG + chr3_3:66660930-66660949 Msa0466100:CDS 30.0%
!! GTCATATATGTTTGGGTTTT+TGG - chr3_3:66660979-66660998 None:intergenic 30.0%
AACCCAAACATATATGACAT+TGG + chr3_3:66660981-66661000 Msa0466100:CDS 30.0%
GACCAATGTCATATATGTTT+GGG - chr3_3:66660986-66661005 None:intergenic 30.0%
ACTTCATCTAGAAAATCTTG+TGG - chr3_3:66661275-66661294 None:intergenic 30.0%
ATAGAGGATACATAACTAGT+TGG + chr3_3:66661300-66661319 Msa0466100:CDS 30.0%
TTATGCAACACTTGGAAAAT+AGG + chr3_3:66661470-66661489 Msa0466100:CDS 30.0%
TATGCAACACTTGGAAAATA+GGG + chr3_3:66661471-66661490 Msa0466100:CDS 30.0%
! GATGTTGACTATTCTGAATT+TGG + chr3_3:66661784-66661803 Msa0466100:three_prime_UTR 30.0%
! TAATTTTCAACTGTATGGAC+AGG + chr3_3:66661855-66661874 Msa0466100:three_prime_UTR 30.0%
TATGGACAGGAAAAATATTG+AGG + chr3_3:66661868-66661887 Msa0466100:three_prime_UTR 30.0%
! CTAATACAACATGTGGCTTT+TGG - chr3_3:66655422-66655441 None:intergenic 35.0%
GTTGAATTCAGTGTTCACAA+AGG - chr3_3:66655523-66655542 None:intergenic 35.0%
GAGACTTTATCAAACGTTTG+TGG - chr3_3:66655545-66655564 None:intergenic 35.0%
GTTGCATCTTTATCTGATTC+TGG - chr3_3:66655630-66655649 None:intergenic 35.0%
ATCAGATAAAGATGCAACAC+AGG + chr3_3:66655632-66655651 Msa0466100:CDS 35.0%
TTAATCACGAGCTCTTTGAA+AGG - chr3_3:66655702-66655721 None:intergenic 35.0%
AGAGGAATTCTTCCATTCAA+AGG + chr3_3:66655888-66655907 Msa0466100:CDS 35.0%
!! ATTCTCGTTTGAGTTTTCCT+GGG - chr3_3:66656084-66656103 None:intergenic 35.0%
!! TATTCTCGTTTGAGTTTTCC+TGG - chr3_3:66656085-66656104 None:intergenic 35.0%
CTAATAAATGGGATAGACAC+TGG + chr3_3:66656574-66656593 Msa0466100:intron 35.0%
!! GAACTACTTGTTGACTCATT+TGG - chr3_3:66656606-66656625 None:intergenic 35.0%
AGTTCAAATCGGATTCTTTG+TGG + chr3_3:66656650-66656669 Msa0466100:intron 35.0%
! TCTTTTGTCTTAACCCCTTT+CGG + chr3_3:66656822-66656841 Msa0466100:intron 35.0%
ATTCTTCTACAAACCGAAAG+GGG - chr3_3:66656838-66656857 None:intergenic 35.0%
CATTCTTCTACAAACCGAAA+GGG - chr3_3:66656839-66656858 None:intergenic 35.0%
ACATTCTTCTACAAACCGAA+AGG - chr3_3:66656840-66656859 None:intergenic 35.0%
! TTTCGGTTTGTAGAAGAATG+TGG + chr3_3:66656839-66656858 Msa0466100:intron 35.0%
! CTACATATTTGTTGGTACCT+TGG - chr3_3:66657189-66657208 None:intergenic 35.0%
AGGTACCAACAAATATGTAG+TGG + chr3_3:66657189-66657208 Msa0466100:intron 35.0%
GATTTAGAAGACATGTTCTG+TGG - chr3_3:66657215-66657234 None:intergenic 35.0%
TGAAAATGACATTAGCACAG+AGG + chr3_3:66657324-66657343 Msa0466100:intron 35.0%
!! TGGCTCTAACAAAAGAAACT+AGG - chr3_3:66657679-66657698 None:intergenic 35.0%
! CTTTTGTTAGAGCCAATTTG+TGG + chr3_3:66657684-66657703 Msa0466100:intron 35.0%
TCGCAACTTCTTGAAACATA+GGG - chr3_3:66658410-66658429 None:intergenic 35.0%
ATCGCAACTTCTTGAAACAT+AGG - chr3_3:66658409-66658428 None:intergenic 35.0%
! GTTTCAAGAAGTTGCGATTT+TGG + chr3_3:66658010-66658029 Msa0466100:intron 35.0%
!! ACTTGGTCAAAATTGGTTTG+GGG - chr3_3:66658098-66658117 None:intergenic 35.0%
! GACTTGGTCAAAATTGGTTT+GGG - chr3_3:66658099-66658118 None:intergenic 35.0%
!! TGACTTGGTCAAAATTGGTT+TGG - chr3_3:66658100-66658119 None:intergenic 35.0%
!! TGCATTGACTTGGTCAAAAT+TGG - chr3_3:66658105-66658124 None:intergenic 35.0%
TGACTTGATCAAAATTGGCA+TGG + chr3_3:66658317-66658336 Msa0466100:intron 35.0%
GACTTGATCAAAATTGGCAT+GGG + chr3_3:66658318-66658337 Msa0466100:intron 35.0%
ACTTGATCAAAATTGGCATG+GGG + chr3_3:66658319-66658338 Msa0466100:intron 35.0%
AAAAGTCAATACTTAGGAGG+CGG + chr3_3:66658356-66658375 Msa0466100:intron 35.0%
! GTTTCAAGAAGTTGCGATTT+TGG - chr3_3:66658010-66658029 None:intergenic 35.0%
GCAACTTCTTGAAACATAGA+GGG + chr3_3:66658412-66658431 Msa0466100:intron 35.0%
!!! TGTTGGCTTAATTGCAGTTT+TGG - chr3_3:66658438-66658457 None:intergenic 35.0%
ATAGACATTTAACCCTGCAT+GGG + chr3_3:66658578-66658597 Msa0466100:intron 35.0%
ACAATGCAAAATAAAGGCAG+TGG + chr3_3:66658643-66658662 Msa0466100:intron 35.0%
CAAAATAAAGGCAGTGGTAA+AGG + chr3_3:66658649-66658668 Msa0466100:intron 35.0%
AGTGGTAAAGGCAGTATATT+TGG + chr3_3:66658661-66658680 Msa0466100:intron 35.0%
GTGGTAAAGGCAGTATATTT+GGG + chr3_3:66658662-66658681 Msa0466100:intron 35.0%
AACTTCACACATATAGTAGG+GGG - chr3_3:66658854-66658873 None:intergenic 35.0%
GTCTCATGTTGAAATTAGTG+TGG - chr3_3:66658938-66658957 None:intergenic 35.0%
TTTCTAAACTTGTGCCTCAA+GGG + chr3_3:66659130-66659149 Msa0466100:intron 35.0%
! CTACCTTTTGTGCTTATGAT+TGG + chr3_3:66659278-66659297 Msa0466100:intron 35.0%
!! ATAATAAGGCGTTGGTAGAA+AGG - chr3_3:66659523-66659542 None:intergenic 35.0%
! TCCATACCATCCATGTTTTA+AGG + chr3_3:66659571-66659590 Msa0466100:intron 35.0%
ACCTTAAAACATGGATGGTA+TGG - chr3_3:66659575-66659594 None:intergenic 35.0%
AATGGATCTGCAGAAACAAA+TGG - chr3_3:66659622-66659641 None:intergenic 35.0%
ATGAAGTAGAATTACTCCTG+TGG - chr3_3:66660007-66660026 None:intergenic 35.0%
! GAAACAATAGGGTTCTTTTC+TGG + chr3_3:66660200-66660219 Msa0466100:intron 35.0%
! TCTGGCTTGCATGTATTTAT+AGG + chr3_3:66660218-66660237 Msa0466100:intron 35.0%
GTATTTATAGGCCAAACTTC+TGG + chr3_3:66660230-66660249 Msa0466100:intron 35.0%
GAGAAATATGCCAGAATTAG+TGG + chr3_3:66660276-66660295 Msa0466100:intron 35.0%
AAATATGCCAGAATTAGTGG+AGG + chr3_3:66660279-66660298 Msa0466100:intron 35.0%
TTAAAAACTATCCACGCTGA+CGG - chr3_3:66660561-66660580 None:intergenic 35.0%
ACAAGTTTAGATTGGATCTC+GGG + chr3_3:66660783-66660802 Msa0466100:CDS 35.0%
TGATTCTTATGAAGCTTGGA+AGG - chr3_3:66660833-66660852 None:intergenic 35.0%
TCTGTGATTCTTATGAAGCT+TGG - chr3_3:66660837-66660856 None:intergenic 35.0%
GGACCAATGTCATATATGTT+TGG - chr3_3:66660987-66661006 None:intergenic 35.0%
!! TGAGATGGAACATGGTTTTA+CGG + chr3_3:66661034-66661053 Msa0466100:CDS 35.0%
CTGACATAGAATGCATAACA+TGG + chr3_3:66661081-66661100 Msa0466100:CDS 35.0%
GCATAACATGGTTGAATAGA+TGG + chr3_3:66661093-66661112 Msa0466100:CDS 35.0%
TTAACATATAGGACTGAGCA+AGG - chr3_3:66661122-66661141 None:intergenic 35.0%
ACCACTTGAAAGAATTTGCA+TGG + chr3_3:66661171-66661190 Msa0466100:CDS 35.0%
CCACTTGAAAGAATTTGCAT+GGG + chr3_3:66661172-66661191 Msa0466100:CDS 35.0%
CACTTGAAAGAATTTGCATG+GGG + chr3_3:66661173-66661192 Msa0466100:CDS 35.0%
GGCCTCATTATCCATAAAAA+TGG - chr3_3:66661218-66661237 None:intergenic 35.0%
CTAGATGAAGTTAAGGATAG+AGG + chr3_3:66661284-66661303 Msa0466100:CDS 35.0%
ACACTTGAAACTATTTCAGC+AGG + chr3_3:66661392-66661411 Msa0466100:CDS 35.0%
AAGAAAGGCCAACAAATAGT+AGG - chr3_3:66661422-66661441 None:intergenic 35.0%
!! ACTATTTGTTGGCCTTTCTT+TGG + chr3_3:66661422-66661441 Msa0466100:CDS 35.0%
GTGAGCAACAAACAAATTGT+AGG + chr3_3:66661444-66661463 Msa0466100:CDS 35.0%
GTAGGTATTTATGCAACACT+TGG + chr3_3:66661462-66661481 Msa0466100:CDS 35.0%
! TCTCTTCCCTTTTAACATCA+TGG - chr3_3:66661508-66661527 None:intergenic 35.0%
AGAGATAACCAAACTTGTGA+TGG + chr3_3:66661523-66661542 Msa0466100:CDS 35.0%
CATCATTTCCATCACAAGTT+TGG - chr3_3:66661534-66661553 None:intergenic 35.0%
! CAAACTTGTGATGGAAATGA+TGG + chr3_3:66661532-66661551 Msa0466100:CDS 35.0%
! GAAATGATGGAAGGAGAAAA+AGG + chr3_3:66661545-66661564 Msa0466100:CDS 35.0%
TATTGAGGTTCTTGTTGACA+AGG + chr3_3:66661883-66661902 Msa0466100:three_prime_UTR 35.0%
TTAGTACCATTTCCAGCACA+AGG + chr3_3:66655438-66655457 Msa0466100:CDS 40.0%
! GTTTGGCTAGTTGCATGAAA+GGG - chr3_3:66655473-66655492 None:intergenic 40.0%
! AGTTTGGCTAGTTGCATGAA+AGG - chr3_3:66655474-66655493 None:intergenic 40.0%
! TCTTGGAGCTGACTTTGTTA+AGG + chr3_3:66655563-66655582 Msa0466100:CDS 40.0%
! CTTGGAGCTGACTTTGTTAA+GGG + chr3_3:66655564-66655583 Msa0466100:CDS 40.0%
! CAATTTGAGACCATACCTGA+TGG + chr3_3:66655600-66655619 Msa0466100:CDS 40.0%
TTCTGGTAAACCATCAGGTA+TGG - chr3_3:66655613-66655632 None:intergenic 40.0%
TCTGATTCTGGTAAACCATC+AGG - chr3_3:66655618-66655637 None:intergenic 40.0%
ACAGGATGTTCTAACGTTGT+GGG + chr3_3:66655650-66655669 Msa0466100:CDS 40.0%
GATGGCAATTATGACTTTGC+TGG + chr3_3:66655768-66655787 Msa0466100:CDS 40.0%
TTATGACTTTGCTGGAAGAG+TGG + chr3_3:66655776-66655795 Msa0466100:CDS 40.0%
AAGTAGAAGCAGTCCAAAGT+TGG - chr3_3:66655827-66655846 None:intergenic 40.0%
TTTGGACTGCTTCTACTTGT+GGG + chr3_3:66655829-66655848 Msa0466100:CDS 40.0%
TGTGGGATATTTGCAATTCG+AGG + chr3_3:66655854-66655873 Msa0466100:CDS 40.0%
AACGAGAATACAACGTATCG+TGG + chr3_3:66656095-66656114 Msa0466100:intron 40.0%
!! AGTGTTATGTCTCTAGGACA+CGG - chr3_3:66657124-66657143 None:intergenic 40.0%
CCTAGAGACATAACACTTGA+CGG + chr3_3:66657127-66657146 Msa0466100:intron 40.0%
GCAAGTGACAACTATGTCTA+GGG - chr3_3:66657167-66657186 None:intergenic 40.0%
TGTGGCCACTACATATTTGT+TGG - chr3_3:66657197-66657216 None:intergenic 40.0%
TTGCTCACATACTTCTCCAT+CGG + chr3_3:66657258-66657277 Msa0466100:intron 40.0%
CAACGTTATGATTCATCCGA+TGG - chr3_3:66657277-66657296 None:intergenic 40.0%
!!! TGCTATTTTTGGCGCTTGAT+AGG + chr3_3:66657627-66657646 Msa0466100:intron 40.0%
GCAACTTCTTGAAACATAGG+GGG - chr3_3:66658005-66658024 None:intergenic 40.0%
CGCAACTTCTTGAAACATAG+GGG - chr3_3:66658411-66658430 None:intergenic 40.0%
AAAAGTCAATACTTAGGGGG+CGG - chr3_3:66658061-66658080 None:intergenic 40.0%
!! TTGGTCAAAATTGGTTTGGG+GGG - chr3_3:66658096-66658115 None:intergenic 40.0%
!! CTTGGTCAAAATTGGTTTGG+GGG - chr3_3:66658097-66658116 None:intergenic 40.0%
CTTGATCAAAATTGGCATGG+GGG + chr3_3:66658320-66658339 Msa0466100:intron 40.0%
TTGATCAAAATTGGCATGGG+GGG + chr3_3:66658321-66658340 Msa0466100:intron 40.0%
CGCAACTTCTTGAAACATAG+AGG + chr3_3:66658411-66658430 Msa0466100:intron 40.0%
GATAGACATTTAACCCTGCA+TGG + chr3_3:66658577-66658596 Msa0466100:intron 40.0%
GATATTCACATTCCCATGCA+GGG - chr3_3:66658593-66658612 None:intergenic 40.0%
!! GGCATGTAGCTGATTTTTGA+TGG + chr3_3:66658683-66658702 Msa0466100:intron 40.0%
GCTGCAACAAATGTGGAAAA+CGG - chr3_3:66658714-66658733 None:intergenic 40.0%
AACGCAACTTAAAGGGCAAT+AGG + chr3_3:66658810-66658829 Msa0466100:intron 40.0%
!! TCATGTTAACTTGTGCCCTA+AGG + chr3_3:66658990-66659009 Msa0466100:intron 40.0%
!! CATGTTAACTTGTGCCCTAA+GGG + chr3_3:66658991-66659010 Msa0466100:intron 40.0%
!! CTTCTTAACTTGTGCCCTTA+GGG - chr3_3:66659008-66659027 None:intergenic 40.0%
GTTTCTAAACTTGTGCCTCA+AGG + chr3_3:66659129-66659148 Msa0466100:intron 40.0%
AATGCTAACTTATGCCCTTG+AGG - chr3_3:66659147-66659166 None:intergenic 40.0%
CTTTCGGTATAATAAGGCGT+TGG - chr3_3:66659531-66659550 None:intergenic 40.0%
GTGACCGAACAATGAAGAAA+AGG - chr3_3:66659874-66659893 None:intergenic 40.0%
TTGGTATCCTCCACTAATTC+TGG - chr3_3:66660289-66660308 None:intergenic 40.0%
GAATTAGTGGAGGATACCAA+TGG + chr3_3:66660289-66660308 Msa0466100:intron 40.0%
AAAATCCTCAGCACACGTAT+TGG + chr3_3:66660362-66660381 Msa0466100:intron 40.0%
AAATCCTCAGCACACGTATT+GGG + chr3_3:66660363-66660382 Msa0466100:intron 40.0%
! TTTTATTGCGGATGGCACTT+TGG + chr3_3:66660758-66660777 Msa0466100:CDS 40.0%
GTAAAACCATGTTCCATCTC+AGG - chr3_3:66661035-66661054 None:intergenic 40.0%
CCCATGCAAATTCTTTCAAG+TGG - chr3_3:66661175-66661194 None:intergenic 40.0%
AATGAGGCCAGATGTAGTAA+TGG + chr3_3:66661229-66661248 Msa0466100:CDS 40.0%
ATGAGGCCAGATGTAGTAAT+GGG + chr3_3:66661230-66661249 Msa0466100:CDS 40.0%
TCTTCACCCATTACTACATC+TGG - chr3_3:66661239-66661258 None:intergenic 40.0%
! CTGATGGATGATCAAGAACT+TGG - chr3_3:66661337-66661356 None:intergenic 40.0%
GTTCTTGATCATCCATCAGT+TGG + chr3_3:66661338-66661357 Msa0466100:CDS 40.0%
TTGATCATCCATCAGTTGGA+GGG + chr3_3:66661342-66661361 Msa0466100:CDS 40.0%
AATTCCAACCACAATGAGTC+AGG - chr3_3:66661370-66661389 None:intergenic 40.0%
! GTTTGTTGCTCACCAAAGAA+AGG - chr3_3:66661437-66661456 None:intergenic 40.0%
CAACACTTGGAAAATAGGGA+TGG + chr3_3:66661475-66661494 Msa0466100:CDS 40.0%
! CTTGTGATGGAAATGATGGA+AGG + chr3_3:66661536-66661555 Msa0466100:CDS 40.0%
AGAGATGAGACAAAACTGCT+TGG + chr3_3:66661571-66661590 Msa0466100:CDS 40.0%
AGCTACAGATGCTACTAATG+TGG + chr3_3:66661607-66661626 Msa0466100:CDS 40.0%
GCTACAGATGCTACTAATGT+GGG + chr3_3:66661608-66661627 Msa0466100:CDS 40.0%
ACATGACCTTGTGCTGGAAA+TGG - chr3_3:66655447-66655466 None:intergenic 45.0%
TGTGAAAACCGTTGCAACGT+AGG - chr3_3:66655497-66655516 None:intergenic 45.0%
CACAGGATGTTCTAACGTTG+TGG + chr3_3:66655649-66655668 Msa0466100:CDS 45.0%
TGGAAGAGTGGCTAAGGATT+TGG + chr3_3:66655788-66655807 Msa0466100:CDS 45.0%
GGAAGAGTGGCTAAGGATTT+GGG + chr3_3:66655789-66655808 Msa0466100:CDS 45.0%
GCATTCGAGAGATCCAACTT+TGG + chr3_3:66655811-66655830 Msa0466100:CDS 45.0%
CTTTGGACTGCTTCTACTTG+TGG + chr3_3:66655828-66655847 Msa0466100:CDS 45.0%
TGCTTCTACTTGTGGGTTTG+TGG + chr3_3:66655836-66655855 Msa0466100:CDS 45.0%
GCTTCTACTTGTGGGTTTGT+GGG + chr3_3:66655837-66655856 Msa0466100:CDS 45.0%
TTCGAGGAGCTTGTCAAAAG+AGG + chr3_3:66655870-66655889 Msa0466100:CDS 45.0%
TTCATGGTCATTGAGTCGCA+CGG + chr3_3:66656698-66656717 Msa0466100:intron 45.0%
CCGTCAAGTGTTATGTCTCT+AGG - chr3_3:66657130-66657149 None:intergenic 45.0%
! CTATGTCTAGGGTCCATGAT+TGG - chr3_3:66657156-66657175 None:intergenic 45.0%
GGCAAGTGACAACTATGTCT+AGG - chr3_3:66657168-66657187 None:intergenic 45.0%
! GACATAGTTGTCACTTGCCA+AGG + chr3_3:66657169-66657188 Msa0466100:intron 45.0%
TGACCAAGTCAATGCACACA+TGG + chr3_3:66658109-66658128 Msa0466100:intron 45.0%
TGATCAAGTCAAAGCTGACG+TGG - chr3_3:66658308-66658327 None:intergenic 45.0%
TACTTCCTCATAGACGACGT+TGG + chr3_3:66658461-66658480 Msa0466100:intron 45.0%
GGATATTCACATTCCCATGC+AGG - chr3_3:66658594-66658613 None:intergenic 45.0%
!! GCTTCTTAACTTGTGCCCTT+AGG - chr3_3:66659009-66659028 None:intergenic 45.0%
! GAAGAAAAGGGTCTGGTTCA+TGG - chr3_3:66659826-66659845 None:intergenic 45.0%
ACGTAGTTGCTTCCTAGCAA+TGG + chr3_3:66660158-66660177 Msa0466100:intron 45.0%
TCTGGCATATTTCTCACGCA+TGG - chr3_3:66660271-66660290 None:intergenic 45.0%
AGAATTGGAAGGTGAAGCAC+TGG + chr3_3:66660941-66660960 Msa0466100:CDS 45.0%
!!! GTTTGGGTTTTTGGCCCTAA+GGG - chr3_3:66660970-66660989 None:intergenic 45.0%
!!! TGTTTGGGTTTTTGGCCCTA+AGG - chr3_3:66660971-66660990 None:intergenic 45.0%
ATTGGTCCACTTCACATGCT+TGG + chr3_3:66660999-66661018 Msa0466100:CDS 45.0%
CACTTTCCTGAGATGGAACA+TGG + chr3_3:66661026-66661045 Msa0466100:CDS 45.0%
!! GAACATGGTTTTACGGCAAG+TGG + chr3_3:66661041-66661060 Msa0466100:CDS 45.0%
CTTGATCATCCATCAGTTGG+AGG + chr3_3:66661341-66661360 Msa0466100:CDS 45.0%
CAGGTGTGCCTACTATTTGT+TGG + chr3_3:66661411-66661430 Msa0466100:CDS 45.0%
TGAGACAAAACTGCTTGGAG+TGG + chr3_3:66661576-66661595 Msa0466100:CDS 45.0%
ACAGATGCTACTAATGTGGG+AGG + chr3_3:66661611-66661630 Msa0466100:CDS 45.0%
!!! TCTAAATAATTATTTTTTAT+TGG + chr3_3:66656940-66656959 Msa0466100:intron 5.0%
GCCAAACTCCTACGTTGCAA+CGG + chr3_3:66655486-66655505 Msa0466100:CDS 50.0%
ACCGTTGCAACGTAGGAGTT+TGG - chr3_3:66655490-66655509 None:intergenic 50.0%
CTTTGCTGGAAGAGTGGCTA+AGG + chr3_3:66655782-66655801 Msa0466100:CDS 50.0%
!! CGTTTGAGTTTTCCTGGGTC+AGG - chr3_3:66656079-66656098 None:intergenic 50.0%
! CACTTGACGGATGCCAATCA+TGG + chr3_3:66657140-66657159 Msa0466100:intron 50.0%
AATAAGACCCGTGTGACGCA+CGG - chr3_3:66657782-66657801 None:intergenic 50.0%
!! CGTCCATGTGTGCATTGACT+TGG - chr3_3:66658115-66658134 None:intergenic 50.0%
GACATCCAACGTCGTCTATG+AGG - chr3_3:66658469-66658488 None:intergenic 50.0%
GGTTACGGCTGCAACAAATG+TGG - chr3_3:66658721-66658740 None:intergenic 50.0%
TGTGGGCCATATGCATGCTT+CGG + chr3_3:66658895-66658914 Msa0466100:intron 50.0%
AAGCAGCGAAGAAAAGGGTC+TGG - chr3_3:66659833-66659852 None:intergenic 50.0%
ACTTCCCAATACGTGTGCTG+AGG - chr3_3:66660370-66660389 None:intergenic 50.0%
ATTTGCATACACCGTCAGCG+TGG + chr3_3:66660547-66660566 Msa0466100:intron 50.0%
!! TGAAGCACTGGACACCCTTA+GGG + chr3_3:66660953-66660972 Msa0466100:CDS 50.0%
GTCCACTTCACATGCTTGGT+AGG + chr3_3:66661003-66661022 Msa0466100:CDS 50.0%
TGCCTACCAAGCATGTGAAG+TGG - chr3_3:66661008-66661027 None:intergenic 50.0%
TGGTAGGCACTTTCCTGAGA+TGG + chr3_3:66661019-66661038 Msa0466100:CDS 50.0%
! CGGCAAGTGGTTCGAGTTTA+TGG + chr3_3:66661054-66661073 Msa0466100:CDS 50.0%
GGTTCCTGACTCATTGTGGT+TGG + chr3_3:66661363-66661382 Msa0466100:CDS 50.0%
GGGTTCACATGACCTTGTGC+TGG - chr3_3:66655453-66655472 None:intergenic 55.0%
AGGGACATGATACCTGACCC+AGG + chr3_3:66656064-66656083 Msa0466100:intron 55.0%
! TTGGTAACCCGTGCGTCACA+CGG + chr3_3:66657771-66657790 Msa0466100:intron 55.0%
ATAAGACCCGTGTGACGCAC+GGG - chr3_3:66657781-66657800 None:intergenic 55.0%
CACACACACACACACACACG+TGG - chr3_3:66658138-66658157 None:intergenic 55.0%
CTCACGCCGAAGCATGCATA+TGG - chr3_3:66658904-66658923 None:intergenic 55.0%
! GGGTCTGGTTCATGGTGCAA+AGG - chr3_3:66659818-66659837 None:intergenic 55.0%
!! GTGAAGCACTGGACACCCTT+AGG + chr3_3:66660952-66660971 Msa0466100:CDS 55.0%
GTCAGGAACCCTCCAACTGA+TGG - chr3_3:66661353-66661372 None:intergenic 55.0%
GGAGGGTTCCTGACTCATTG+TGG + chr3_3:66661359-66661378 Msa0466100:CDS 55.0%
TGGTAACCCGTGCGTCACAC+GGG + chr3_3:66657772-66657791 Msa0466100:intron 60.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 66655368 66661961 66655368 ID=Msa0466100;Name=Msa0466100
chr3_3 mRNA 66655368 66661961 66655368 ID=Msa0466100-mRNA-1;Parent=Msa0466100;Name=Msa0466100-mRNA-1;_AED=0.26;_eAED=0.26;_QI=46|1|1|1|1|1|2|267|479
chr3_3 exon 66655368 66655909 66655368 ID=Msa0466100-mRNA-1:exon:15144;Parent=Msa0466100-mRNA-1
chr3_3 exon 66660751 66661961 66660751 ID=Msa0466100-mRNA-1:exon:15145;Parent=Msa0466100-mRNA-1
chr3_3 five_prime_UTR 66655368 66655413 66655368 ID=Msa0466100-mRNA-1:five_prime_utr;Parent=Msa0466100-mRNA-1
chr3_3 CDS 66655414 66655909 66655414 ID=Msa0466100-mRNA-1:cds;Parent=Msa0466100-mRNA-1
chr3_3 CDS 66660751 66661694 66660751 ID=Msa0466100-mRNA-1:cds;Parent=Msa0466100-mRNA-1
chr3_3 three_prime_UTR 66661695 66661961 66661695 ID=Msa0466100-mRNA-1:three_prime_utr;Parent=Msa0466100-mRNA-1
Gene Sequence

>Msa0466100

ATGGACCAAAAGCCACATGTTGTATTAGTACCATTTCCAGCACAAGGTCATGTGAACCCTTTCATGCAACTAGCCAAACTCCTACGTTGCAACGGTTTTCACATAACCTTTGTGAACACTGAATTCAACCACAAACGTTTGATAAAGTCTCTTGGAGCTGACTTTGTTAAGGGTCTACCTGATTTTCAATTTGAGACCATACCTGATGGTTTACCAGAATCAGATAAAGATGCAACACAGGATGTTCTAACGTTGTGGGATGCAACTAGAAAATTTTTTTATGCTCCTTTCAAAGAGCTCGTGATTAAGCTCAACACTTCATCACCTCATATTCCAGTTACTTGTATAATTGCTGATGGCAATTATGACTTTGCTGGAAGAGTGGCTAAGGATTTGGGCATTCGAGAGATCCAACTTTGGACTGCTTCTACTTGTGGGTTTGTGGGATATTTGCAATTCGAGGAGCTTGTCAAAAGAGGAATTCTTCCATTCAAAGATGAAAATTTTATTGCGGATGGCACTTTGGAAACAAGTTTAGATTGGATCTCGGGAATGAAAGATATTAGACTAAAAGACCTTCCAAGCTTCATAAGAATCACAGATCTTAATGATGTAATGTTTAATTTCCAAGGTTCTAAAGCACAAAATTGTTTAAGATCATCAATGATTATAATCAACACATTTGAAGAATTGGAAGGTGAAGCACTGGACACCCTTAGGGCCAAAAACCCAAACATATATGACATTGGTCCACTTCACATGCTTGGTAGGCACTTTCCTGAGATGGAACATGGTTTTACGGCAAGTGGTTCGAGTTTATGGAAATCTGACATAGAATGCATAACATGGTTGAATAGATGGAAACCTTGCTCAGTCCTATATGTTAATTATGGAAGTGTAACTGTTATGACTGATCACCACTTGAAAGAATTTGCATGGGGAATAGCAAATAGTAAGTTACCATTTTTATGGATAATGAGGCCAGATGTAGTAATGGGTGAAGAAACTTCATCTTTGCCACAAGATTTTCTAGATGAAGTTAAGGATAGAGGATACATAACTAGTTGGTGCATGCAAGACCAAGTTCTTGATCATCCATCAGTTGGAGGGTTCCTGACTCATTGTGGTTGGAATTCTACACTTGAAACTATTTCAGCAGGTGTGCCTACTATTTGTTGGCCTTTCTTTGGTGAGCAACAAACAAATTGTAGGTATTTATGCAACACTTGGAAAATAGGGATGGAAATTAACCATGATGTTAAAAGGGAAGAGATAACCAAACTTGTGATGGAAATGATGGAAGGAGAAAAAGGAAAAGAGATGAGACAAAACTGCTTGGAGTGGAAGAAGAAAGCTACAGATGCTACTAATGTGGGAGGATCATCATACAATAATTTCTATAATTTAATTAAAGAGCTTCTTCATCACAATGCTATTTGA
Protein sequence

>Msa0466100

MDQKPHVVLVPFPAQGHVNPFMQLAKLLRCNGFHITFVNTEFNHKRLIKSLGADFVKGLPDFQFETIPDGLPESDKDATQDVLTLWDATRKFFYAPFKELVIKLNTSSPHIPVTCIIADGNYDFAGRVAKDLGIREIQLWTASTCGFVGYLQFEELVKRGILPFKDENFIADGTLETSLDWISGMKDIRLKDLPSFIRITDLNDVMFNFQGSKAQNCLRSSMIIINTFEELEGEALDTLRAKNPNIYDIGPLHMLGRHFPEMEHGFTASGSSLWKSDIECITWLNRWKPCSVLYVNYGSVTVMTDHHLKEFAWGIANSKLPFLWIMRPDVVMGEETSSLPQDFLDEVKDRGYITSWCMQDQVLDHPSVGGFLTHCGWNSTLETISAGVPTICWPFFGEQQTNCRYLCNTWKIGMEINHDVKREEITKLVMEMMEGEKGKEMRQNCLEWKKKATDATNVGGSSYNNFYNLIKELLHHNAI*