AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0419730

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0419730 MtrunA17_Chr3g0118321 95.936 566 22 1 1 565 1 566 0.0 1130
Msa0419730 MtrunA17_Chr3g0118331 86.549 565 76 0 1 565 1 565 0.0 1013
Msa0419730 MtrunA17_Chr3g0118351 79.882 338 44 2 251 565 1 337 0.0 563
Msa0419730 MtrunA17_Chr8g0382691 49.818 550 269 5 17 564 26 570 0.0 561
Msa0419730 MtrunA17_Chr3g0118341 85.128 195 28 1 1 194 1 195 5.71e-121 355
Msa0419730 MtrunA17_Chr5g0436461 32.682 563 318 17 6 544 7 532 3.69e-75 248
Msa0419730 MtrunA17_Chr5g0429511 33.511 564 321 20 4 545 6 537 5.92e-72 240
Msa0419730 MtrunA17_Chr7g0237491 32.230 574 320 16 7 542 14 556 9.11e-72 240
Msa0419730 MtrunA17_Chr5g0437681 30.465 581 331 18 1 544 1 545 4.32e-71 238
Msa0419730 MtrunA17_Chr5g0404361 31.634 569 327 19 1 544 58 589 9.58e-70 236
Msa0419730 MtrunA17_Chr7g0238351 33.043 575 322 20 2 540 8 555 1.10e-69 234
Msa0419730 MtrunA17_Chr7g0237441 31.937 573 325 17 4 540 11 554 7.51e-69 233
Msa0419730 MtrunA17_Chr5g0404341 30.976 594 338 22 1 561 12 566 6.73e-68 229
Msa0419730 MtrunA17_Chr3g0104061 33.272 541 316 16 22 545 23 535 1.10e-67 229
Msa0419730 MtrunA17_Chr7g0238941 30.449 601 334 20 7 561 16 578 1.15e-67 229
Msa0419730 MtrunA17_Chr5g0431581 31.373 561 328 18 9 541 4 535 7.23e-67 227
Msa0419730 MtrunA17_Chr3g0114211 30.835 587 334 23 2 554 12 560 7.43e-67 227
Msa0419730 MtrunA17_Chr2g0278811 32.646 582 322 24 12 544 25 585 1.10e-66 227
Msa0419730 MtrunA17_Chr4g0031901 33.031 551 299 22 25 540 44 559 1.65e-65 224
Msa0419730 MtrunA17_Chr7g0238981 30.660 561 338 14 21 553 43 580 1.89e-62 216
Msa0419730 MtrunA17_Chr8g0346581 30.216 556 312 20 25 544 34 549 4.63e-60 209
Msa0419730 MtrunA17_Chr7g0240991 29.066 578 339 21 7 544 3 549 1.54e-59 207
Msa0419730 MtrunA17_Chr8g0374271 28.007 557 335 16 25 565 31 537 8.92e-56 196
Msa0419730 MtrunA17_Chr4g0024861 28.366 557 328 17 25 562 27 531 2.18e-55 195
Msa0419730 MtrunA17_Chr7g0240971 28.098 573 324 23 18 544 18 548 3.08e-55 196
Msa0419730 MtrunA17_Chr4g0075071 28.242 563 327 18 25 565 31 538 2.84e-54 192
Msa0419730 MtrunA17_Chr4g0008521 28.546 557 331 16 24 544 25 550 5.21e-54 192
Msa0419730 MtrunA17_Chr3g0143671 27.692 585 342 22 6 565 9 537 1.11e-53 191
Msa0419730 MtrunA17_Chr4g0043251 26.976 582 361 20 1 562 1 538 2.68e-53 190
Msa0419730 MtrunA17_Chr8g0374261 27.341 534 316 18 48 562 52 532 5.15e-52 186
Msa0419730 MtrunA17_Chr5g0402831 28.674 558 321 20 25 562 31 531 6.87e-52 186
Msa0419730 MtrunA17_Chr3g0121151 28.007 582 340 23 7 562 49 577 1.52e-50 183
Msa0419730 MtrunA17_Chr3g0079321 26.958 549 341 16 37 562 41 552 2.15e-50 182
Msa0419730 MtrunA17_Chr1g0157341 26.863 577 345 20 11 562 9 533 4.06e-50 181
Msa0419730 MtrunA17_Chr4g0056511 27.837 564 337 18 27 562 29 550 5.16e-50 182
Msa0419730 MtrunA17_Chr3g0121161 27.778 576 349 21 7 562 49 577 5.88e-50 181
Msa0419730 MtrunA17_Chr2g0322441 27.305 564 325 19 25 562 30 534 1.08e-49 180
Msa0419730 MtrunA17_Chr3g0121171 28.366 557 333 20 26 562 27 537 3.74e-49 184
Msa0419730 MtrunA17_Chr3g0121171 27.778 576 349 21 7 562 584 1112 4.81e-49 183
Msa0419730 MtrunA17_Chr3g0121171 28.007 582 340 23 7 562 1159 1687 8.04e-48 180
Msa0419730 MtrunA17_Chr3g0121171 27.219 507 304 19 76 562 1792 2253 4.00e-43 166
Msa0419730 MtrunA17_Chr4g0038671 26.212 557 339 17 25 562 30 533 1.77e-48 176
Msa0419730 MtrunA17_Chr7g0234061 26.560 561 347 19 26 562 30 549 2.03e-46 172
Msa0419730 MtrunA17_Chr4g0043261 27.224 562 329 21 26 562 26 532 2.76e-45 167
Msa0419730 MtrunA17_Chr3g0118931 75.556 90 22 0 476 565 10 99 6.31e-45 154
Msa0419730 MtrunA17_Chr4g0024641 26.494 502 300 16 80 562 3 454 2.14e-37 148
Msa0419730 MtrunA17_Chr4g0005921 33.559 295 165 9 7 296 9 277 4.15e-37 145
Msa0419730 MtrunA17_Chr4g0005921 40.120 167 95 3 379 544 373 535 5.71e-29 121
Msa0419730 MtrunA17_Chr3g0133861 32.919 322 182 12 249 544 5 318 1.89e-32 127
Msa0419730 MtrunA17_Chr1g0197301 27.129 317 201 9 234 539 5 302 5.28e-27 112
Msa0419730 MtrunA17_Chr5g0436431 31.602 231 126 8 313 524 11 228 7.62e-21 91.7
Msa0419730 MtrunA17_Chr3g0133871 33.566 143 91 4 26 166 33 173 6.80e-18 82.8
Msa0419730 MtrunA17_Chr1g0197311 27.053 207 115 5 44 218 43 245 7.41e-15 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0419730 AT5G21105.1 66.786 560 182 2 9 564 19 578 0.0 800
Msa0419730 AT5G21100.1 63.587 552 193 5 17 564 16 563 0.0 738
Msa0419730 AT5G21105.3 65.720 528 177 2 1 524 11 538 0.0 737
Msa0419730 AT4G39830.1 48.866 573 270 9 7 564 16 580 0.0 572
Msa0419730 AT5G21105.2 67.109 377 123 1 189 564 11 387 0.0 549
Msa0419730 AT4G39830.2 49.084 491 229 8 87 564 3 485 2.22e-168 487
Msa0419730 AT4G39830.3 49.080 489 228 8 89 564 3 483 1.05e-167 485
Msa0419730 AT4G39830.4 47.047 491 226 9 87 564 3 472 4.95e-155 452
Msa0419730 AT5G05390.1 29.604 581 334 17 1 544 1 543 1.17e-70 237
Msa0419730 AT5G58910.2 32.310 554 305 20 24 544 29 545 7.27e-67 227
Msa0419730 AT5G03260.1 30.973 565 330 19 7 545 6 536 1.54e-66 226
Msa0419730 AT5G58910.3 32.491 554 303 21 24 544 29 544 7.42e-66 224
Msa0419730 AT5G07130.1 32.062 577 329 19 1 544 1 547 1.72e-65 224
Msa0419730 AT5G48100.1 31.459 569 314 22 14 544 11 541 2.61e-64 220
Msa0419730 AT2G30210.1 30.309 551 333 13 21 544 22 548 4.61e-64 220
Msa0419730 AT2G29130.1 32.689 569 327 20 1 540 6 547 5.55e-64 219
Msa0419730 AT2G40370.1 28.231 588 348 16 1 544 1 558 2.66e-63 218
Msa0419730 AT5G09360.1 30.729 576 327 19 1 544 12 547 5.12e-63 217
Msa0419730 AT2G46570.1 29.982 557 318 20 22 544 29 547 3.78e-62 214
Msa0419730 AT1G18140.1 30.159 567 323 17 20 544 24 559 1.65e-61 213
Msa0419730 AT5G01040.1 29.152 566 336 17 10 544 13 544 1.68e-61 213
Msa0419730 AT5G01050.1 29.174 569 334 18 10 544 13 546 2.71e-61 213
Msa0419730 AT2G38080.1 31.525 590 332 22 8 561 5 558 2.86e-61 212
Msa0419730 AT3G09220.1 29.381 565 335 18 12 544 13 545 3.12e-59 207
Msa0419730 AT1G55570.1 30.249 562 317 22 26 562 30 541 4.88e-58 203
Msa0419730 AT5G60020.1 30.329 577 337 19 1 540 3 551 5.34e-58 204
Msa0419730 AT5G01190.1 30.511 567 333 19 24 561 24 558 1.02e-57 202
Msa0419730 AT5G58910.1 31.227 538 293 21 40 544 8 501 5.01e-57 200
Msa0419730 AT5G01190.2 30.769 546 317 19 45 561 31 544 1.21e-55 196
Msa0419730 AT5G60020.3 30.483 538 311 17 40 540 8 519 1.13e-54 194
Msa0419730 AT4G22010.1 28.674 558 326 19 25 562 26 531 1.59e-53 191
Msa0419730 AT1G21860.1 27.972 572 337 17 16 565 16 534 1.90e-53 190
Msa0419730 AT3G13390.1 29.485 563 320 23 26 562 29 540 3.78e-53 190
Msa0419730 AT4G25240.2 29.472 587 346 22 4 563 7 552 8.51e-53 189
Msa0419730 AT4G25240.1 29.472 587 346 22 4 563 7 552 8.51e-53 189
Msa0419730 AT1G21850.1 27.682 578 350 18 4 562 3 531 1.24e-52 188
Msa0419730 AT4G12420.1 27.080 565 346 19 27 565 27 551 1.77e-52 189
Msa0419730 AT4G12420.2 27.080 565 346 19 27 565 27 551 1.77e-52 189
Msa0419730 AT5G51480.1 28.164 561 341 21 27 563 30 552 2.35e-52 188
Msa0419730 AT1G75790.1 27.243 602 335 21 4 562 1 542 3.54e-51 184
Msa0419730 AT5G60020.2 29.196 572 318 21 1 524 3 535 9.78e-51 183
Msa0419730 AT5G48450.2 25.907 579 361 17 9 562 8 543 2.83e-50 182
Msa0419730 AT5G48450.1 25.907 579 361 17 9 562 8 543 5.24e-50 182
Msa0419730 AT1G76160.1 26.235 587 351 19 5 565 4 534 7.33e-50 181
Msa0419730 AT5G66920.1 26.908 524 325 12 25 539 37 511 1.27e-49 180
Msa0419730 AT2G23630.2 26.944 553 336 16 27 562 37 538 3.46e-48 176
Msa0419730 AT2G46570.2 29.234 496 280 19 83 544 4 462 5.04e-48 174
Msa0419730 AT2G23630.1 26.944 553 336 16 27 562 32 533 5.43e-48 176
Msa0419730 AT5G07130.2 31.134 485 277 16 91 544 4 462 1.77e-47 173
Msa0419730 AT5G07130.3 31.134 485 277 16 91 544 4 462 1.77e-47 173
Msa0419730 AT4G28090.1 26.792 586 344 21 9 565 9 538 6.88e-47 172
Msa0419730 AT4G37160.1 25.859 553 343 16 27 562 33 535 6.91e-47 172
Msa0419730 AT1G41830.1 24.352 579 360 18 6 562 10 532 2.13e-46 171
Msa0419730 AT3G13400.2 26.523 558 342 22 26 562 28 538 6.30e-42 159
Msa0419730 AT3G13400.1 26.523 558 342 22 26 562 28 538 6.30e-42 159
Msa0419730 AT1G55560.1 26.354 554 346 19 27 562 28 537 4.40e-41 156
Msa0419730 AT3G09220.2 28.452 478 279 17 99 544 2 448 1.19e-40 154
Msa0419730 AT4G38420.1 24.735 566 349 18 25 565 30 543 5.81e-40 153
Msa0419730 AT4G37160.2 25.966 466 284 14 27 480 33 449 8.01e-36 140
Msa0419730 AT4G38420.3 24.405 504 309 16 25 508 30 481 7.83e-31 126
Msa0419730 AT4G38420.2 24.580 476 288 15 25 480 30 454 1.84e-29 121

Find 162 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATTAACTAGTCTCAATTT+TGG 0.160336 3_2:-67894750 None:intergenic
AAATCGGTAGTTTCACTAAA+TGG 0.163317 3_2:+67894164 Msa0419730:CDS
TATTTCTATCATGGACATTT+TGG 0.179942 3_2:+67889945 Msa0419730:CDS
CAAAATGCAAACCAGTTAAA+TGG 0.189861 3_2:+67894394 Msa0419730:CDS
CCGTTACCGGTAGTTGTATT+TGG 0.192418 3_2:-67894328 None:intergenic
TGCTCAGAGATTTAGTCTTT+TGG 0.198324 3_2:-67889183 None:intergenic
AAAACAAATCATTTCCAAAA+TGG 0.220018 3_2:+67894081 Msa0419730:CDS
TTGGACTGCATTAAGGTTTA+AGG 0.221108 3_2:+67894570 Msa0419730:CDS
TTGTCTTTCTTATCTTTCTA+AGG 0.225064 3_2:+67894809 Msa0419730:three_prime_UTR
CATATGGTTGGACTGCATTA+AGG 0.257525 3_2:+67894563 Msa0419730:CDS
TGTTCCCTAGCAGCTAAATA+TGG 0.261114 3_2:+67891819 Msa0419730:CDS
TGGCTGTGGAGTTCCCATTT+TGG 0.285078 3_2:-67894095 None:intergenic
GTAGTTGTATTTGGATTAAC+TGG 0.289880 3_2:-67894319 None:intergenic
TTTGTTTGGTGCATATGGTT+AGG 0.295869 3_2:+67889245 Msa0419730:CDS
AAACACTAATGGAAGATTAA+TGG 0.302516 3_2:-67894783 None:intergenic
CTTTCAAATTGCATTGTTGT+AGG 0.308083 3_2:-67891851 None:intergenic
AGGCAGATAACCCTGGTGTT+TGG 0.311229 3_2:+67894590 Msa0419730:CDS
CACTACCATTCCCATTTAAC+TGG 0.315490 3_2:-67894405 None:intergenic
GGCAGATAACCCTGGTGTTT+GGG 0.315629 3_2:+67894591 Msa0419730:CDS
TGGCTTTCAATTGGTGTTAG+AGG 0.316278 3_2:+67893929 Msa0419730:CDS
TTGGCTCCACATGAAGAATC+TGG 0.317779 3_2:-67891893 None:intergenic
AATGGCTCTCTTTGTTCCTT+TGG 0.323053 3_2:-67890014 None:intergenic
CATGTTTCTCATGTATAATT+AGG 0.333539 3_2:+67894878 Msa0419730:three_prime_UTR
CATTGAACCACATTTGCATA+TGG 0.333948 3_2:+67894627 Msa0419730:CDS
CTGAGGCTGTTCATAAAGTT+AGG 0.336809 3_2:+67894668 Msa0419730:CDS
GGAATCAATGGCCAGTTTCC+AGG 0.342868 3_2:+67889362 Msa0419730:CDS
TAGGGTCTTGGTCTGTTGTA+AGG 0.344364 3_2:-67893895 None:intergenic
CACCACCAGTCACACCCTTA+TGG 0.345496 3_2:+67894029 Msa0419730:CDS
GTTCACCAATCCATCTCATT+GGG 0.346982 3_2:-67890121 None:intergenic
TAATAGTTGGGCCTGGAAAC+TGG 0.350475 3_2:-67889373 None:intergenic
TAAATTTGCATGGATGTTAA+TGG 0.367515 3_2:+67895026 Msa0419730:three_prime_UTR
AAGCATTAATCAACGAATAA+AGG 0.369014 3_2:+67895000 Msa0419730:three_prime_UTR
TTGTTTGGTGCATATGGTTA+GGG 0.369163 3_2:+67889246 Msa0419730:CDS
AAACGTGTAAACACCGTTAC+CGG 0.380846 3_2:-67894341 None:intergenic
TTAACTTCAGCTTTAATAGT+TGG 0.382060 3_2:-67889386 None:intergenic
TAACTTCAGCTTTAATAGTT+GGG 0.385140 3_2:-67889385 None:intergenic
CCACACTTAAGAGCTTCTTT+AGG 0.398032 3_2:-67894697 None:intergenic
GAAGGATTGTATGTATATAT+AGG 0.401269 3_2:-67889131 None:intergenic
CTGTATTGAAAAGTTTCTCC+TGG 0.402941 3_2:-67889647 None:intergenic
TTTGCAGTTTGGAACTCCTT+GGG 0.403133 3_2:+67889586 Msa0419730:intron
ACAACATGCTCCACACAATC+TGG 0.411894 3_2:-67889335 None:intergenic
GTTAGGGCTTGTGGTGTGCC+TGG 0.412883 3_2:-67893959 None:intergenic
GTGTTCGGTATCGTTCCATA+AGG 0.413714 3_2:-67894044 None:intergenic
CTCAATACACAAAACAAAAT+CGG 0.415806 3_2:+67894148 Msa0419730:CDS
GTGACTGGTGGTGGTAATGT+TGG 0.417838 3_2:-67894019 None:intergenic
AAACAAATCATTTCCAAAAT+GGG 0.418944 3_2:+67894082 Msa0419730:CDS
TCTAAGGTATCATCACTTCA+TGG 0.419599 3_2:+67894825 Msa0419730:three_prime_UTR
TTTGGAACTCCTTGGGCTGA+TGG 0.420214 3_2:+67889593 Msa0419730:CDS
ACTGCAGTTATATTTCCATA+TGG 0.422579 3_2:+67894547 Msa0419730:CDS
AATACAGATTCAAAGTTGAC+AGG 0.425137 3_2:+67889663 Msa0419730:CDS
ATTTGACACGTGCACCTTTG+AGG 0.429330 3_2:+67894521 Msa0419730:CDS
AACTCACCATCATAATGAAA+TGG 0.432896 3_2:-67890032 None:intergenic
CTTAATGCAGTCCAACCATA+TGG 0.434255 3_2:-67894562 None:intergenic
GGTTCACCAATCCATCTCAT+TGG 0.437708 3_2:-67890122 None:intergenic
AATTTGATTGATCCTAAGTA+AGG 0.437892 3_2:-67894223 None:intergenic
AATCGGTAGTTTCACTAAAT+GGG 0.438520 3_2:+67894165 Msa0419730:CDS
TGTGAATGCTTTGCTGTGTT+CGG 0.443250 3_2:-67894059 None:intergenic
GTTTGCAGTTTGGAACTCCT+TGG 0.444823 3_2:+67889585 Msa0419730:intron
TTAAGGATTGTTAGGGCTTG+TGG 0.446548 3_2:-67893968 None:intergenic
AAAATGCAAACCAGTTAAAT+GGG 0.447011 3_2:+67894395 Msa0419730:CDS
GAATAACAGTTCCCTCTGTA+TGG 0.447128 3_2:-67889442 None:intergenic
CAAAGAGCAGCAGGGCTGTA+TGG 0.448009 3_2:+67889972 Msa0419730:CDS
CAGTTATATTTCCATATGGT+TGG 0.450338 3_2:+67894551 Msa0419730:CDS
ATACTATTCACGCGGGGAGT+TGG 0.451050 3_2:-67894909 None:intergenic
AGAGAGCCATTTCATTATGA+TGG 0.456007 3_2:+67890026 Msa0419730:CDS
GATGTCATTTAGGAATATCT+AGG 0.458902 3_2:-67894728 None:intergenic
TAGGAGAAAACTCACTGAAA+TGG 0.458974 3_2:-67891973 None:intergenic
TTGCCAACCACACCTTACTT+AGG 0.459014 3_2:+67894211 Msa0419730:CDS
CAAATTGCATTGTTGTAGGT+TGG 0.462781 3_2:-67891847 None:intergenic
TGGCTCCACATGAAGAATCT+GGG 0.463007 3_2:-67891892 None:intergenic
TTAAATATGTCATAATCCAT+TGG 0.467428 3_2:-67894292 None:intergenic
ATTGAACCACATTTGCATAT+GGG 0.467926 3_2:+67894628 Msa0419730:CDS
TTTGTAGTTAAGGATTGTTA+GGG 0.470399 3_2:-67893975 None:intergenic
TTTGGTATGCAAAGAGCAGC+AGG 0.470698 3_2:+67889963 Msa0419730:CDS
CCTGGTACATATTTCTATCA+TGG 0.478578 3_2:+67889936 Msa0419730:CDS
TAATCCATTGGAAATCTCTC+TGG 0.486255 3_2:-67894280 None:intergenic
GTTCCCTAGCAGCTAAATAT+GGG 0.491107 3_2:+67891820 Msa0419730:CDS
CAATGGAATGCCCAAACACC+AGG 0.492231 3_2:-67894601 None:intergenic
CCCCGCGTGAATAGTATGTA+GGG 0.496003 3_2:+67894915 Msa0419730:three_prime_UTR
TCAGCTTTAATAGTTGGGCC+TGG 0.499380 3_2:-67889380 None:intergenic
TGTGAGGATTTCGGTGGCTG+TGG 0.503552 3_2:-67894109 None:intergenic
GTCCTTGGCTTCTCTCAACT+TGG 0.506872 3_2:+67891950 Msa0419730:CDS
TGTTCGGTATCGTTCCATAA+GGG 0.510120 3_2:-67894043 None:intergenic
GATTGCTAGTACTACGTCCT+TGG 0.510808 3_2:+67891935 Msa0419730:CDS
TCTATAAATGAAATGAAAGA+AGG 0.511625 3_2:-67889149 None:intergenic
TCAGAATCACAAACTTATTG+TGG 0.512257 3_2:+67893793 Msa0419730:intron
CATAAGGGTGTGACTGGTGG+TGG 0.513495 3_2:-67894028 None:intergenic
ATCGTGCGGTGTGAGGATTT+CGG 0.515283 3_2:-67894118 None:intergenic
TCAGCCCCAATGAGATGGAT+TGG 0.516747 3_2:+67890116 Msa0419730:CDS
GCTGTATGGTTCTCTAATAG+TGG 0.517469 3_2:+67889986 Msa0419730:CDS
ACCACATTTGCATATGGGAA+TGG 0.518745 3_2:+67894633 Msa0419730:CDS
ATTGGAAATCTCTCTGGTGG+TGG 0.520673 3_2:-67894274 None:intergenic
CTTATTGTGGTGGAAGCAGA+TGG 0.523378 3_2:+67893806 Msa0419730:CDS
ATCTGCTCCTTAGTGATCTG+TGG 0.529687 3_2:+67890057 Msa0419730:CDS
CCAAATACAACTACCGGTAA+CGG 0.532128 3_2:+67894328 Msa0419730:CDS
TCTCTTCAGCCCCAATGAGA+TGG 0.532184 3_2:+67890111 Msa0419730:CDS
CAGAGGGAACTGTTATTCAC+TGG 0.535040 3_2:+67889447 Msa0419730:CDS
GTTAATCCAAATACAACTAC+CGG 0.535206 3_2:+67894322 Msa0419730:CDS
TGCTCCCATATTTAGCTGCT+AGG 0.538328 3_2:-67891824 None:intergenic
TCACTGGCATGGAATTAGAC+AGG 0.538628 3_2:+67889463 Msa0419730:CDS
TCTCAGTGTGCTATAAATCC+AGG 0.546219 3_2:+67889629 Msa0419730:CDS
TCGTTCCATAAGGGTGTGAC+TGG 0.548390 3_2:-67894034 None:intergenic
GCAAACCAGTTAAATGGGAA+TGG 0.548393 3_2:+67894400 Msa0419730:CDS
GCTCCCATATTTAGCTGCTA+GGG 0.548844 3_2:-67891823 None:intergenic
CCACATTTGCATATGGGAAT+GGG 0.550546 3_2:+67894634 Msa0419730:CDS
ACTAGCAATCCTTATTCTGT+AGG 0.552909 3_2:-67891922 None:intergenic
CCCATTCCCATATGCAAATG+TGG 0.553246 3_2:-67894634 None:intergenic
GGTGTTAGAGGCAGAAAACC+AGG 0.555537 3_2:+67893941 Msa0419730:CDS
ATTCATCCATGGCATTTGCA+TGG 0.556495 3_2:+67894430 Msa0419730:CDS
CATGTTGTGATGGGAATCAA+TGG 0.556686 3_2:+67889350 Msa0419730:CDS
CTACAACAATGCAATTTGAA+AGG 0.558037 3_2:+67891852 Msa0419730:CDS
TGTTGTAAGGAGTACTGAGT+AGG 0.563668 3_2:-67893882 None:intergenic
GGAACTGTTATTCACTGGCA+TGG 0.565221 3_2:+67889452 Msa0419730:CDS
CCATGATAGAAATATGTACC+AGG 0.570980 3_2:-67889936 None:intergenic
CGATGTCATCAACTGCGAAT+GGG 0.572651 3_2:-67893841 None:intergenic
TTGTGTGGAGCATGTTGTGA+TGG 0.577399 3_2:+67889340 Msa0419730:CDS
GATCCTAAGTAAGGTGTGGT+TGG 0.579576 3_2:-67894214 None:intergenic
GAATCACAAACTTATTGTGG+TGG 0.579698 3_2:+67893796 Msa0419730:intron
GGCCAAGTTGAGAGAAGCCA+AGG 0.580752 3_2:-67891952 None:intergenic
ATCTCATTGGGGCTGAAGAG+AGG 0.581211 3_2:-67890109 None:intergenic
ACCACCAGAGAGATTTCCAA+TGG 0.581481 3_2:+67894276 Msa0419730:CDS
TCTAATAGTGGATTTACCAA+AGG 0.582956 3_2:+67889998 Msa0419730:CDS
GAGATGGATTGGTGAACCAC+AGG 0.584866 3_2:+67890127 Msa0419730:CDS
TCCCCGCGTGAATAGTATGT+AGG 0.585500 3_2:+67894914 Msa0419730:three_prime_UTR
TCGATGTCATCAACTGCGAA+TGG 0.586686 3_2:-67893842 None:intergenic
ATAACTGCAGTGTTCCTCAA+AGG 0.587942 3_2:-67894535 None:intergenic
ACTAATGGAAGATTAATGGT+TGG 0.587978 3_2:-67894779 None:intergenic
ATAAAGGTGATAAATTTGCA+TGG 0.590600 3_2:+67895016 Msa0419730:three_prime_UTR
CACAAGCTCACATGAACAAG+AGG 0.595059 3_2:+67890082 Msa0419730:CDS
CTGTATGGAGCTTGTTCGTG+AGG 0.597737 3_2:-67889427 None:intergenic
TTACACGTTTCAGTTGAATG+AGG 0.598282 3_2:+67894354 Msa0419730:CDS
GAGGAGAATCGTGCGGTGTG+AGG 0.599110 3_2:-67894125 None:intergenic
TGTGTGGAGCATGTTGTGAT+GGG 0.602225 3_2:+67889341 Msa0419730:CDS
TGCACCCCAGATTCTTCATG+TGG 0.602253 3_2:+67891887 Msa0419730:CDS
GGCTCCACATGAAGAATCTG+GGG 0.602686 3_2:-67891891 None:intergenic
AGGTTTAAGGCAGATAACCC+TGG 0.609626 3_2:+67894583 Msa0419730:CDS
CAACAATGCAATTTGAAAGG+TGG 0.612313 3_2:+67891855 Msa0419730:CDS
TCATGTCCATGCAAATGCCA+TGG 0.613062 3_2:-67894436 None:intergenic
GATGACATCGACATCTACTC+AGG 0.614053 3_2:+67893854 Msa0419730:CDS
ATACAGATTCAAAGTTGACA+GGG 0.614232 3_2:+67889664 Msa0419730:CDS
TTGTGTGCCACAGATCACTA+AGG 0.616013 3_2:-67890064 None:intergenic
AGCTCACATGAACAAGAGGT+TGG 0.616753 3_2:+67890086 Msa0419730:CDS
AGCTTGCTCATCAATGGACG+AGG 0.623207 3_2:+67891786 Msa0419730:CDS
TTCCATAAGGGTGTGACTGG+TGG 0.624649 3_2:-67894031 None:intergenic
TCCATTGGAAATCTCTCTGG+TGG 0.626333 3_2:-67894277 None:intergenic
CCTAAAGAAGCTCTTAAGTG+TGG 0.626917 3_2:+67894697 Msa0419730:CDS
ATGGTAGTGAAATTCATCCA+TGG 0.631220 3_2:+67894419 Msa0419730:CDS
CCCCTACATACTATTCACGC+GGG 0.638161 3_2:-67894916 None:intergenic
TTCACCAATCCATCTCATTG+GGG 0.642456 3_2:-67890120 None:intergenic
GCAGCAGTTCCATCAGCCCA+AGG 0.643166 3_2:-67889602 None:intergenic
ACGAACAAGCTCCATACAGA+GGG 0.648620 3_2:+67889431 Msa0419730:CDS
CACGAACAAGCTCCATACAG+AGG 0.651295 3_2:+67889430 Msa0419730:CDS
CCGCGTGAATAGTATGTAGG+GGG 0.654165 3_2:+67894917 Msa0419730:three_prime_UTR
TTGGTATGCAAAGAGCAGCA+GGG 0.660158 3_2:+67889964 Msa0419730:CDS
CCCGCGTGAATAGTATGTAG+GGG 0.662901 3_2:+67894916 Msa0419730:three_prime_UTR
AATGTGGTTCAATGTGACAA+TGG 0.664380 3_2:-67894618 None:intergenic
GATTGATCCTAAGTAAGGTG+TGG 0.679397 3_2:-67894218 None:intergenic
GTGCGGTGTGAGGATTTCGG+TGG 0.702906 3_2:-67894115 None:intergenic
AATGGAATGCCCAAACACCA+GGG 0.708938 3_2:-67894600 None:intergenic
GGTGAAGGGAGATTTAGACC+AGG 0.724991 3_2:+67894478 Msa0419730:CDS
CCCTACATACTATTCACGCG+GGG 0.729879 3_2:-67894915 None:intergenic
TATTGAGGAGGAGAATCGTG+CGG 0.763434 3_2:-67894132 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATATATATATAATATTAAC+TGG + chr3_2:67889892-67889911 Msa0419730:intron 10.0%
!!! AATTTTTCTACTTTTTTTTT+TGG + chr3_2:67891361-67891380 Msa0419730:intron 10.0%
!! GATATTTAAAAAAGAATAAA+TGG - chr3_2:67892587-67892606 None:intergenic 10.0%
!!! TAAATATCATAGTTTTTTTT+TGG + chr3_2:67892599-67892618 Msa0419730:intron 10.0%
!!! TTTATAGAATTATTTTTTGT+TGG - chr3_2:67892962-67892981 None:intergenic 10.0%
!!! GTTTTATTAAAAATGTTATT+TGG - chr3_2:67893565-67893584 None:intergenic 10.0%
!! ATATTTAATTATAACTAGAC+TGG - chr3_2:67889530-67889549 None:intergenic 15.0%
!! TATATAATATAATTAGAGCT+AGG + chr3_2:67889867-67889886 Msa0419730:intron 15.0%
!! TATATATAATATTAACTGGT+TGG + chr3_2:67889896-67889915 Msa0419730:intron 15.0%
!!! TTTTAAAGCATAATAACTTT+TGG + chr3_2:67890606-67890625 Msa0419730:intron 15.0%
!!! TTTAATAAAAGTACCTATTA+AGG + chr3_2:67890811-67890830 Msa0419730:intron 15.0%
!! GTTTAATATATAAAGATAGT+GGG - chr3_2:67890898-67890917 None:intergenic 15.0%
!! TGTTTAATATATAAAGATAG+TGG - chr3_2:67890899-67890918 None:intergenic 15.0%
!!! TTTTATTACTTTTTTAAACG+TGG + chr3_2:67891011-67891030 Msa0419730:intron 15.0%
!! CTTAAAAAAAAAATATGAAC+TGG + chr3_2:67891334-67891353 Msa0419730:intron 15.0%
!! TTGTCTTGATTAAAATTTAA+AGG - chr3_2:67891485-67891504 None:intergenic 15.0%
!!! AGTATTATTTTTCATTCTTT+TGG + chr3_2:67891603-67891622 Msa0419730:intron 15.0%
!! ACTATATTATCATTCATAAA+AGG - chr3_2:67891745-67891764 None:intergenic 15.0%
!!! TATTTTGCATATCATTATTA+GGG + chr3_2:67892112-67892131 Msa0419730:intron 15.0%
!!! TTGAAAAAATGTTTTAGATA+TGG + chr3_2:67892423-67892442 Msa0419730:intron 15.0%
!!! AAAAAAACTTTAACTTCAAT+AGG + chr3_2:67892557-67892576 Msa0419730:intron 15.0%
!! TGTTCAATTAATTGTTATAT+TGG + chr3_2:67892780-67892799 Msa0419730:intron 15.0%
!! TCTATAAATGAAATGAAAGA+AGG - chr3_2:67889152-67889171 None:intergenic 20.0%
!!! CATATTTAAGTACTTTTCAT+TGG - chr3_2:67890874-67890893 None:intergenic 20.0%
!!! TATTACTCATTTTTACAAGT+GGG + chr3_2:67890932-67890951 Msa0419730:intron 20.0%
!! AAAAAAAAAATTGACAAGTG+GGG - chr3_2:67891271-67891290 None:intergenic 20.0%
!! GAAAAAAAAAATTGACAAGT+GGG - chr3_2:67891272-67891291 None:intergenic 20.0%
!! TGAAAAAAAAAATTGACAAG+TGG - chr3_2:67891273-67891292 None:intergenic 20.0%
!! AATTGTAAGTTAATATGAAC+TGG + chr3_2:67891434-67891453 Msa0419730:intron 20.0%
!! ACATATATCATATATGTAGT+GGG - chr3_2:67892006-67892025 None:intergenic 20.0%
!! AACATATATCATATATGTAG+TGG - chr3_2:67892007-67892026 None:intergenic 20.0%
!!! CTATTTTGCATATCATTATT+AGG + chr3_2:67892111-67892130 Msa0419730:intron 20.0%
!!! CAATTGATTCCTTTTTTATT+TGG - chr3_2:67892244-67892263 None:intergenic 20.0%
!! GAAAACGAATGAAATAATTT+AGG + chr3_2:67892327-67892346 Msa0419730:intron 20.0%
!! ATCGTAGGAATTAAAAATTA+AGG + chr3_2:67892495-67892514 Msa0419730:intron 20.0%
!!! ATATCATAGTTTTTTTTTGG+TGG + chr3_2:67892602-67892621 Msa0419730:intron 20.0%
!! TCAATTAATTGTTATATTGG+AGG + chr3_2:67892783-67892802 Msa0419730:intron 20.0%
!! CAATTAATTGTTATATTGGA+GGG + chr3_2:67892784-67892803 Msa0419730:intron 20.0%
!! AATTAATTGTTATATTGGAG+GGG + chr3_2:67892785-67892804 Msa0419730:intron 20.0%
!! ATACATTCAAATAAATGAAG+CGG + chr3_2:67892934-67892953 Msa0419730:intron 20.0%
!! TTCATCATTATCACATTTAA+AGG - chr3_2:67893009-67893028 None:intergenic 20.0%
!!! TTAAATGTGATAATGATGAA+CGG + chr3_2:67893009-67893028 Msa0419730:intron 20.0%
!! CGAATTAAATATTGTTTCAT+TGG + chr3_2:67893354-67893373 Msa0419730:intron 20.0%
!! TTAAATATTGTTTCATTGGT+TGG + chr3_2:67893358-67893377 Msa0419730:intron 20.0%
!! AACTTCACGTTAAATTATTT+AGG + chr3_2:67893397-67893416 Msa0419730:intron 20.0%
!! GAAAAGTTGAATTTAAATCT+TGG + chr3_2:67893419-67893438 Msa0419730:intron 20.0%
!!! CATTTAGATTTAGAATATCT+TGG - chr3_2:67893622-67893641 None:intergenic 20.0%
!! TGAAATAATGAATCAATCTA+TGG - chr3_2:67893740-67893759 None:intergenic 20.0%
!! AAAACAAATCATTTCCAAAA+TGG + chr3_2:67894081-67894100 Msa0419730:CDS 20.0%
!! AAACAAATCATTTCCAAAAT+GGG + chr3_2:67894082-67894101 Msa0419730:CDS 20.0%
!! TTAAATATGTCATAATCCAT+TGG - chr3_2:67894295-67894314 None:intergenic 20.0%
!!! TAATTAACTAGTCTCAATTT+TGG - chr3_2:67894753-67894772 None:intergenic 20.0%
!! AAAGACAAAAAAAACACTAA+TGG - chr3_2:67894797-67894816 None:intergenic 20.0%
! GAAGGATTGTATGTATATAT+AGG - chr3_2:67889134-67889153 None:intergenic 25.0%
!! TAACTTCAGCTTTAATAGTT+GGG - chr3_2:67889388-67889407 None:intergenic 25.0%
!! TTAACTTCAGCTTTAATAGT+TGG - chr3_2:67889389-67889408 None:intergenic 25.0%
!!! TATTTCTATCATGGACATTT+TGG + chr3_2:67889945-67889964 Msa0419730:CDS 25.0%
! AGTGTAAAAGTTTCTTTACA+AGG - chr3_2:67890331-67890350 None:intergenic 25.0%
!!! AGTTTTAAAGTTGTCATGAT+CGG + chr3_2:67890448-67890467 Msa0419730:intron 25.0%
!!! TCACAAATAAAGAGTATCAT+TGG - chr3_2:67890709-67890728 None:intergenic 25.0%
!!! CTATTACTCATTTTTACAAG+TGG + chr3_2:67890931-67890950 Msa0419730:intron 25.0%
! GTAATAAAATGTGTACTACT+TGG - chr3_2:67890959-67890978 None:intergenic 25.0%
! TTATTACTTCTTTATGCAAG+TGG + chr3_2:67890972-67890991 Msa0419730:intron 25.0%
! TATTACTTCTTTATGCAAGT+GGG + chr3_2:67890973-67890992 Msa0419730:intron 25.0%
! GTAATAAAATGTGTACTACT+TGG - chr3_2:67890959-67890978 None:intergenic 25.0%
!! TCGTTGGAATTTTTCTATAA+TGG + chr3_2:67891225-67891244 Msa0419730:intron 25.0%
! AAAAAAAAATTGACAAGTGG+GGG - chr3_2:67891270-67891289 None:intergenic 25.0%
! AAGACAATAGAAATATGAAC+TGG + chr3_2:67891307-67891326 Msa0419730:intron 25.0%
! TACTATTCCATTATCTTTCT+TGG - chr3_2:67891587-67891606 None:intergenic 25.0%
!! TCTTTTGGTAAATGTACAAT+TGG + chr3_2:67891618-67891637 Msa0419730:intron 25.0%
! AATTGAGATGAGCATATATT+TGG - chr3_2:67892161-67892180 None:intergenic 25.0%
!!! TGATTCCTTTTTTATTTGGT+GGG - chr3_2:67892240-67892259 None:intergenic 25.0%
!!! TTGATTCCTTTTTTATTTGG+TGG - chr3_2:67892241-67892260 None:intergenic 25.0%
! AATCAATTGTCGACATAATA+AGG + chr3_2:67892255-67892274 Msa0419730:intron 25.0%
!!! TTACTTTTAAGAGGAAATTC+CGG + chr3_2:67892283-67892302 Msa0419730:intron 25.0%
! TGAATTAGACTATTAATCTC+CGG - chr3_2:67892305-67892324 None:intergenic 25.0%
! GAGATTAATAGTCTAATTCA+TGG + chr3_2:67892305-67892324 Msa0419730:intron 25.0%
! GTAAGAAAAACTTCACTAAT+AGG + chr3_2:67892376-67892395 Msa0419730:intron 25.0%
! TGCATAATATATACAAGGTT+CGG - chr3_2:67892641-67892660 None:intergenic 25.0%
! GACAATGCATAATATATACA+AGG - chr3_2:67892646-67892665 None:intergenic 25.0%
! ATAAAGCCAAATGTTAGTAT+AGG + chr3_2:67892754-67892773 Msa0419730:intron 25.0%
! ATTAATTGTTATATTGGAGG+GGG + chr3_2:67892786-67892805 Msa0419730:intron 25.0%
!!! TCTTTTCCTTATTTTATACG+AGG - chr3_2:67893137-67893156 None:intergenic 25.0%
! AGTTGAATTTAAATCTTGGT+TGG + chr3_2:67893423-67893442 Msa0419730:intron 25.0%
! TGAAACAAACAGAAATTATG+GGG - chr3_2:67893776-67893795 None:intergenic 25.0%
! CTGAAACAAACAGAAATTAT+GGG - chr3_2:67893777-67893796 None:intergenic 25.0%
!! TCTGAAACAAACAGAAATTA+TGG - chr3_2:67893778-67893797 None:intergenic 25.0%
!!! AAAGCCAGTAGTTTTTTTTA+GGG - chr3_2:67893916-67893935 None:intergenic 25.0%
! TTTGTAGTTAAGGATTGTTA+GGG - chr3_2:67893978-67893997 None:intergenic 25.0%
!! TTTTGTAGTTAAGGATTGTT+AGG - chr3_2:67893979-67893998 None:intergenic 25.0%
! CTCAATACACAAAACAAAAT+CGG + chr3_2:67894148-67894167 Msa0419730:CDS 25.0%
! AATTTGATTGATCCTAAGTA+AGG - chr3_2:67894226-67894245 None:intergenic 25.0%
! AAAATGCAAACCAGTTAAAT+GGG + chr3_2:67894395-67894414 Msa0419730:CDS 25.0%
! AAACACTAATGGAAGATTAA+TGG - chr3_2:67894786-67894805 None:intergenic 25.0%
! TTGTCTTTCTTATCTTTCTA+AGG + chr3_2:67894809-67894828 Msa0419730:three_prime_UTR 25.0%
! CATGTTTCTCATGTATAATT+AGG + chr3_2:67894878-67894897 Msa0419730:three_prime_UTR 25.0%
! AAGCATTAATCAACGAATAA+AGG + chr3_2:67895000-67895019 Msa0419730:three_prime_UTR 25.0%
! ATAAAGGTGATAAATTTGCA+TGG + chr3_2:67895016-67895035 Msa0419730:three_prime_UTR 25.0%
! TAAATTTGCATGGATGTTAA+TGG + chr3_2:67895026-67895045 Msa0419730:three_prime_UTR 25.0%
!! AGGTAAATTCTTAGTTCTAG+TGG + chr3_2:67889483-67889502 Msa0419730:intron 30.0%
TTATAACTAGACTGGTACTT+TGG - chr3_2:67889522-67889541 None:intergenic 30.0%
CTGTAAAAATGTTTGCAGTT+TGG + chr3_2:67889575-67889594 Msa0419730:intron 30.0%
AATACAGATTCAAAGTTGAC+AGG + chr3_2:67889663-67889682 Msa0419730:CDS 30.0%
ATACAGATTCAAAGTTGACA+GGG + chr3_2:67889664-67889683 Msa0419730:CDS 30.0%
AATTAATCAACATGTAGCAG+TGG - chr3_2:67889750-67889769 None:intergenic 30.0%
AACAAAAGAAAAACCATTGC+TGG - chr3_2:67889812-67889831 None:intergenic 30.0%
!! TAACTGGTTGGTGTTAAATA+TGG + chr3_2:67889908-67889927 Msa0419730:intron 30.0%
!! TCTAATAGTGGATTTACCAA+AGG + chr3_2:67889998-67890017 Msa0419730:CDS 30.0%
AACTCACCATCATAATGAAA+TGG - chr3_2:67890035-67890054 None:intergenic 30.0%
CAACGATGATTTGATGAAAT+GGG - chr3_2:67891211-67891230 None:intergenic 30.0%
!!! AGCTTTATTTTGACGCAAAA+AGG + chr3_2:67891653-67891672 Msa0419730:intron 30.0%
!!! GCTTTATTTTGACGCAAAAA+GGG + chr3_2:67891654-67891673 Msa0419730:intron 30.0%
CTTTCAAATTGCATTGTTGT+AGG - chr3_2:67891854-67891873 None:intergenic 30.0%
CTACAACAATGCAATTTGAA+AGG + chr3_2:67891852-67891871 Msa0419730:CDS 30.0%
!!! CTTATTCTGTAGGTCTTTTT+TGG - chr3_2:67891915-67891934 None:intergenic 30.0%
CAAAAAAGACCTACAGAATA+AGG + chr3_2:67891913-67891932 Msa0419730:CDS 30.0%
ATAGACACACACAAACTAAT+TGG - chr3_2:67892095-67892114 None:intergenic 30.0%
CATCTCAATTATCACCATTT+AGG + chr3_2:67892171-67892190 Msa0419730:intron 30.0%
!!! TTTTTTATTTGGTGGGAACA+AGG - chr3_2:67892233-67892252 None:intergenic 30.0%
TTGTTCCCACCAAATAAAAA+AGG + chr3_2:67892232-67892251 Msa0419730:intron 30.0%
AATTGTCGACATAATAAGGA+AGG + chr3_2:67892259-67892278 Msa0419730:intron 30.0%
!! AAGGAAGGTTTACTTTTAAG+AGG + chr3_2:67892274-67892293 Msa0419730:intron 30.0%
TGAAATAATTTAGGAACCGT+AGG + chr3_2:67892336-67892355 Msa0419730:intron 30.0%
GCATAATATATACAAGGTTC+GGG - chr3_2:67892640-67892659 None:intergenic 30.0%
ACATCTCCTATACTAACATT+TGG - chr3_2:67892763-67892782 None:intergenic 30.0%
! AATTGTCGCATCAATTGTTT+TGG + chr3_2:67892844-67892863 Msa0419730:intron 30.0%
!!! GCAATTCTGATTGTTTTGAT+TGG + chr3_2:67892889-67892908 Msa0419730:intron 30.0%
TGCCAAATTTATGTCTATAG+AGG + chr3_2:67893229-67893248 Msa0419730:intron 30.0%
GCCAAATTTATGTCTATAGA+GGG + chr3_2:67893230-67893249 Msa0419730:intron 30.0%
TCCCTCTATAGACATAAATT+TGG - chr3_2:67893234-67893253 None:intergenic 30.0%
CATGCATGTATGATAAAATG+GGG - chr3_2:67893282-67893301 None:intergenic 30.0%
GCATGCATGTATGATAAAAT+GGG - chr3_2:67893283-67893302 None:intergenic 30.0%
TGCATGCATGTATGATAAAA+TGG - chr3_2:67893284-67893303 None:intergenic 30.0%
ACAATCTGACTATCCAATTA+TGG + chr3_2:67893462-67893481 Msa0419730:intron 30.0%
CAATCTGACTATCCAATTAT+GGG + chr3_2:67893463-67893482 Msa0419730:intron 30.0%
AATCTGACTATCCAATTATG+GGG + chr3_2:67893464-67893483 Msa0419730:intron 30.0%
AATCTAAATGCATGATGCTT+TGG + chr3_2:67893632-67893651 Msa0419730:intron 30.0%
ATCTAAATGCATGATGCTTT+GGG + chr3_2:67893633-67893652 Msa0419730:intron 30.0%
TGCAATTCAAGGAATGATAT+GGG - chr3_2:67893717-67893736 None:intergenic 30.0%
TCAGAATCACAAACTTATTG+TGG + chr3_2:67893793-67893812 Msa0419730:intron 30.0%
!!! AGTAGTTTTTTTTAGGGTCT+TGG - chr3_2:67893910-67893929 None:intergenic 30.0%
AAGACCCTAAAAAAAACTAC+TGG + chr3_2:67893909-67893928 Msa0419730:CDS 30.0%
!!! GAAAGCCAGTAGTTTTTTTT+AGG - chr3_2:67893917-67893936 None:intergenic 30.0%
!! AAAAACTACTGGCTTTCAAT+TGG + chr3_2:67893920-67893939 Msa0419730:CDS 30.0%
!! CAGAGATTGTTTTGTAGTTA+AGG - chr3_2:67893988-67894007 None:intergenic 30.0%
!!! TTTTGTTTTGTGTATTGAGG+AGG - chr3_2:67894147-67894166 None:intergenic 30.0%
!!! CGATTTTGTTTTGTGTATTG+AGG - chr3_2:67894150-67894169 None:intergenic 30.0%
AAATCGGTAGTTTCACTAAA+TGG + chr3_2:67894164-67894183 Msa0419730:CDS 30.0%
AATCGGTAGTTTCACTAAAT+GGG + chr3_2:67894165-67894184 Msa0419730:CDS 30.0%
GTAGTTGTATTTGGATTAAC+TGG - chr3_2:67894322-67894341 None:intergenic 30.0%
GTTAATCCAAATACAACTAC+CGG + chr3_2:67894322-67894341 Msa0419730:CDS 30.0%
CAAAATGCAAACCAGTTAAA+TGG + chr3_2:67894394-67894413 Msa0419730:CDS 30.0%
! ATTTGCATGGACATGATTTT+TGG + chr3_2:67894443-67894462 Msa0419730:CDS 30.0%
! TTTGCATGGACATGATTTTT+GGG + chr3_2:67894444-67894463 Msa0419730:CDS 30.0%
ACTGCAGTTATATTTCCATA+TGG + chr3_2:67894547-67894566 Msa0419730:CDS 30.0%
CAGTTATATTTCCATATGGT+TGG + chr3_2:67894551-67894570 Msa0419730:CDS 30.0%
ATTGAACCACATTTGCATAT+GGG + chr3_2:67894628-67894647 Msa0419730:CDS 30.0%
! GATGTCATTTAGGAATATCT+AGG - chr3_2:67894731-67894750 None:intergenic 30.0%
!! CTCAATTTTGGATGTCATTT+AGG - chr3_2:67894741-67894760 None:intergenic 30.0%
ACTAATGGAAGATTAATGGT+TGG - chr3_2:67894782-67894801 None:intergenic 30.0%
!! GCTCAGAGATTTAGTCTTTT+GGG - chr3_2:67889185-67889204 None:intergenic 35.0%
!! TGCTCAGAGATTTAGTCTTT+TGG - chr3_2:67889186-67889205 None:intergenic 35.0%
! TGCTGAAAGCAGTTTTTGTT+TGG + chr3_2:67889231-67889250 Msa0419730:CDS 35.0%
!!! CAGTTTTTGTTTGGTGCATA+TGG + chr3_2:67889240-67889259 Msa0419730:CDS 35.0%
!! TTTGTTTGGTGCATATGGTT+AGG + chr3_2:67889245-67889264 Msa0419730:CDS 35.0%
!! TTGTTTGGTGCATATGGTTA+GGG + chr3_2:67889246-67889265 Msa0419730:CDS 35.0%
ATACAAAAAGCCAGATTGTG+TGG + chr3_2:67889325-67889344 Msa0419730:CDS 35.0%
CTGTATTGAAAAGTTTCTCC+TGG - chr3_2:67889650-67889669 None:intergenic 35.0%
CCATGATAGAAATATGTACC+AGG - chr3_2:67889939-67889958 None:intergenic 35.0%
! CCTGGTACATATTTCTATCA+TGG + chr3_2:67889936-67889955 Msa0419730:CDS 35.0%
AGAGAGCCATTTCATTATGA+TGG + chr3_2:67890026-67890045 Msa0419730:CDS 35.0%
AAATAAGTGATGTGTCACGT+GGG - chr3_2:67890784-67890803 None:intergenic 35.0%
TAAATAAGTGATGTGTCACG+TGG - chr3_2:67890785-67890804 None:intergenic 35.0%
CCTTGTTAGTGTATTGTCAT+TGG - chr3_2:67890848-67890867 None:intergenic 35.0%
CCAATGACAATACACTAACA+AGG + chr3_2:67890845-67890864 Msa0419730:intron 35.0%
AAAGAACGGGCAACTATATA+AGG - chr3_2:67891067-67891086 None:intergenic 35.0%
TATAGTTGCCCGTTCTTTAA+CGG + chr3_2:67891069-67891088 Msa0419730:intron 35.0%
! CTCAATTTTTCTTCCTCCAA+TGG + chr3_2:67891095-67891114 Msa0419730:intron 35.0%
! AATTTTTCTTCCTCCAATGG+AGG + chr3_2:67891098-67891117 Msa0419730:intron 35.0%
! ATTTTTCTTCCTCCAATGGA+GGG + chr3_2:67891099-67891118 Msa0419730:intron 35.0%
! TATTAGAGCATCTCCAATAG+GGG - chr3_2:67891159-67891178 None:intergenic 35.0%
! CTATTAGAGCATCTCCAATA+GGG - chr3_2:67891160-67891179 None:intergenic 35.0%
! ACTATTAGAGCATCTCCAAT+AGG - chr3_2:67891161-67891180 None:intergenic 35.0%
TATTGGAGATGCTCTAATAG+TGG + chr3_2:67891160-67891179 Msa0419730:intron 35.0%
CCAACGATGATTTGATGAAA+TGG - chr3_2:67891212-67891231 None:intergenic 35.0%
CCATTTCATCAAATCATCGT+TGG + chr3_2:67891209-67891228 Msa0419730:intron 35.0%
GACAGTACCAAGAAAGATAA+TGG + chr3_2:67891577-67891596 Msa0419730:intron 35.0%
!!! TTTTAGAGCTTGCTCATCAA+TGG + chr3_2:67891780-67891799 Msa0419730:intron 35.0%
CAAATTGCATTGTTGTAGGT+TGG - chr3_2:67891850-67891869 None:intergenic 35.0%
CAACAATGCAATTTGAAAGG+TGG + chr3_2:67891855-67891874 Msa0419730:CDS 35.0%
ACTAGCAATCCTTATTCTGT+AGG - chr3_2:67891925-67891944 None:intergenic 35.0%
TAGGAGAAAACTCACTGAAA+TGG - chr3_2:67891976-67891995 None:intergenic 35.0%
GATGAGCATATATTTGGATG+TGG - chr3_2:67892155-67892174 None:intergenic 35.0%
TTATGAGACAGCTACCTAAA+TGG - chr3_2:67892188-67892207 None:intergenic 35.0%
CACTAATAGGTCAAAGAAGT+TGG + chr3_2:67892389-67892408 Msa0419730:intron 35.0%
CTACGATTCTGCACATTAAA+CGG - chr3_2:67892482-67892501 None:intergenic 35.0%
!!! ATAGTTTTTTTTTGGTGGCC+AGG + chr3_2:67892607-67892626 Msa0419730:intron 35.0%
!!! TAGTTTTTTTTTGGTGGCCA+GGG + chr3_2:67892608-67892627 Msa0419730:intron 35.0%
GAGATTTGAATCACATGAGT+GGG + chr3_2:67893031-67893050 Msa0419730:intron 35.0%
AGATTTGAATCACATGAGTG+GGG + chr3_2:67893032-67893051 Msa0419730:intron 35.0%
!!! TTCGTCTTTTTCAAGTGGTT+TGG - chr3_2:67893097-67893116 None:intergenic 35.0%
AAACCACTTGAAAAAGACGA+AGG + chr3_2:67893096-67893115 Msa0419730:intron 35.0%
TGGAGTCCTCGTATAAAATA+AGG + chr3_2:67893128-67893147 Msa0419730:intron 35.0%
TAACTGAGATGCATAGTGAT+TGG + chr3_2:67893166-67893185 Msa0419730:intron 35.0%
CATGTTGATCTAACAAACCA+TGG - chr3_2:67893519-67893538 None:intergenic 35.0%
GAAATGCAATAATCAGCAGT+AGG - chr3_2:67893694-67893713 None:intergenic 35.0%
GCAATTCAAGGAATGATATG+GGG - chr3_2:67893716-67893735 None:intergenic 35.0%
GTGCAATTCAAGGAATGATA+TGG - chr3_2:67893718-67893737 None:intergenic 35.0%
TCAATCTATGGTGCAATTCA+AGG - chr3_2:67893728-67893747 None:intergenic 35.0%
GAATCACAAACTTATTGTGG+TGG + chr3_2:67893796-67893815 Msa0419730:intron 35.0%
! TGGTAATGTTGGAAAAACTG+AGG - chr3_2:67894011-67894030 None:intergenic 35.0%
TAATCCATTGGAAATCTCTC+TGG - chr3_2:67894283-67894302 None:intergenic 35.0%
TTACACGTTTCAGTTGAATG+AGG + chr3_2:67894354-67894373 Msa0419730:CDS 35.0%
! ATGGTAGTGAAATTCATCCA+TGG + chr3_2:67894419-67894438 Msa0419730:CDS 35.0%
!!! TGGACATGATTTTTGGGTTT+TGG + chr3_2:67894450-67894469 Msa0419730:CDS 35.0%
!!! GGACATGATTTTTGGGTTTT+GGG + chr3_2:67894451-67894470 Msa0419730:CDS 35.0%
!!! GATTTTTGGGTTTTGGGATA+TGG + chr3_2:67894457-67894476 Msa0419730:CDS 35.0%
! AAACTTTTCTCATCAACACC+TGG - chr3_2:67894499-67894518 None:intergenic 35.0%
TTGGACTGCATTAAGGTTTA+AGG + chr3_2:67894570-67894589 Msa0419730:CDS 35.0%
AATGTGGTTCAATGTGACAA+TGG - chr3_2:67894621-67894640 None:intergenic 35.0%
CATTGAACCACATTTGCATA+TGG + chr3_2:67894627-67894646 Msa0419730:CDS 35.0%
!!! AATGGGTGTTATTTTTGCTG+AGG + chr3_2:67894651-67894670 Msa0419730:CDS 35.0%
! TCTAAGGTATCATCACTTCA+TGG + chr3_2:67894825-67894844 Msa0419730:three_prime_UTR 35.0%
! CATGTTGTGATGGGAATCAA+TGG + chr3_2:67889350-67889369 Msa0419730:CDS 40.0%
GAATAACAGTTCCCTCTGTA+TGG - chr3_2:67889445-67889464 None:intergenic 40.0%
! TTTGCAGTTTGGAACTCCTT+GGG + chr3_2:67889586-67889605 Msa0419730:intron 40.0%
TCTCAGTGTGCTATAAATCC+AGG + chr3_2:67889629-67889648 Msa0419730:CDS 40.0%
AGCAGTGGAAACAGAAAAAG+AGG - chr3_2:67889735-67889754 None:intergenic 40.0%
! ATCACATTTTTGACCCCAAG+TGG + chr3_2:67889772-67889791 Msa0419730:intron 40.0%
! ATGGACATATATGCCACTTG+GGG - chr3_2:67889788-67889807 None:intergenic 40.0%
! CATGGACATATATGCCACTT+GGG - chr3_2:67889789-67889808 None:intergenic 40.0%
ATATATGTCCATGCCAGCAA+TGG + chr3_2:67889796-67889815 Msa0419730:intron 40.0%
AAGAAAAACCATTGCTGGCA+TGG - chr3_2:67889807-67889826 None:intergenic 40.0%
GCTGTATGGTTCTCTAATAG+TGG + chr3_2:67889986-67890005 Msa0419730:CDS 40.0%
AATGGCTCTCTTTGTTCCTT+TGG - chr3_2:67890017-67890036 None:intergenic 40.0%
TTCACCAATCCATCTCATTG+GGG - chr3_2:67890123-67890142 None:intergenic 40.0%
GTTCACCAATCCATCTCATT+GGG - chr3_2:67890124-67890143 None:intergenic 40.0%
! GTTGAAAGTACGTATACCTG+TGG - chr3_2:67890146-67890165 None:intergenic 40.0%
AAGCACTAATGCTCATATGG+TGG - chr3_2:67890735-67890754 None:intergenic 40.0%
!! GGAAAGCACTAATGCTCATA+TGG - chr3_2:67890738-67890757 None:intergenic 40.0%
GCATTAGTGCTTTCCTAACA+AGG + chr3_2:67890743-67890762 Msa0419730:intron 40.0%
CCATTTAAGGAGTCCTTGTT+AGG - chr3_2:67890759-67890778 None:intergenic 40.0%
CCTAACAAGGACTCCTTAAA+TGG + chr3_2:67890756-67890775 Msa0419730:intron 40.0%
AATAAGTGATGTGTCACGTG+GGG - chr3_2:67890783-67890802 None:intergenic 40.0%
GGAGTCATTGAGTCCTTAAT+AGG - chr3_2:67890827-67890846 None:intergenic 40.0%
ATAGTTGCCCGTTCTTTAAC+GGG + chr3_2:67891070-67891089 Msa0419730:intron 40.0%
ATTGAGTCCCCGTTAAAGAA+CGG - chr3_2:67891081-67891100 None:intergenic 40.0%
ATAGGGGTCCTTACTTAACA+AGG - chr3_2:67891143-67891162 None:intergenic 40.0%
TGTTAAGTAAGGACCCCTAT+TGG + chr3_2:67891143-67891162 Msa0419730:intron 40.0%
GCATAGAAAACCTTGCAACT+AGG + chr3_2:67891182-67891201 Msa0419730:intron 40.0%
TAGAAAACCTTGCAACTAGG+TGG + chr3_2:67891185-67891204 Msa0419730:intron 40.0%
AAAAAATTGACAAGTGGGGG+TGG - chr3_2:67891267-67891286 None:intergenic 40.0%
TAAATGTACAATTGGCCACG+CGG + chr3_2:67891626-67891645 Msa0419730:intron 40.0%
AAAATAAAGCTAACACCGCG+TGG - chr3_2:67891644-67891663 None:intergenic 40.0%
TGTTCCCTAGCAGCTAAATA+TGG + chr3_2:67891819-67891838 Msa0419730:CDS 40.0%
GTTCCCTAGCAGCTAAATAT+GGG + chr3_2:67891820-67891839 Msa0419730:CDS 40.0%
!! ATATGTAGTGGGTCATAGCT+AGG - chr3_2:67891995-67892014 None:intergenic 40.0%
! CTGCTTTAAACACACACCTA+CGG - chr3_2:67892355-67892374 None:intergenic 40.0%
CGTTTAATGTGCAGAATCGT+AGG + chr3_2:67892480-67892499 Msa0419730:intron 40.0%
GGAGATTTGAATCACATGAG+TGG + chr3_2:67893030-67893049 Msa0419730:intron 40.0%
TGAGATGCATAGTGATTGGT+CGG + chr3_2:67893170-67893189 Msa0419730:intron 40.0%
TCCAATTATGGGGACCAAAT+TGG + chr3_2:67893474-67893493 Msa0419730:intron 40.0%
TCCAATTTGGTCCCCATAAT+TGG - chr3_2:67893478-67893497 None:intergenic 40.0%
TTATGGGGACCAAATTGGAT+TGG + chr3_2:67893479-67893498 Msa0419730:intron 40.0%
TATGGGGACCAAATTGGATT+GGG + chr3_2:67893480-67893499 Msa0419730:intron 40.0%
!! TGTTGTAAGGAGTACTGAGT+AGG - chr3_2:67893885-67893904 None:intergenic 40.0%
!! TGGCTTTCAATTGGTGTTAG+AGG + chr3_2:67893929-67893948 Msa0419730:CDS 40.0%
TTAAGGATTGTTAGGGCTTG+TGG - chr3_2:67893971-67893990 None:intergenic 40.0%
TGTTCGGTATCGTTCCATAA+GGG - chr3_2:67894046-67894065 None:intergenic 40.0%
! TGTGAATGCTTTGCTGTGTT+CGG - chr3_2:67894062-67894081 None:intergenic 40.0%
GATTGATCCTAAGTAAGGTG+TGG - chr3_2:67894221-67894240 None:intergenic 40.0%
CCAAATACAACTACCGGTAA+CGG + chr3_2:67894328-67894347 Msa0419730:CDS 40.0%
AAACGTGTAAACACCGTTAC+CGG - chr3_2:67894344-67894363 None:intergenic 40.0%
GCAAACCAGTTAAATGGGAA+TGG + chr3_2:67894400-67894419 Msa0419730:CDS 40.0%
CACTACCATTCCCATTTAAC+TGG - chr3_2:67894408-67894427 None:intergenic 40.0%
ATTCATCCATGGCATTTGCA+TGG + chr3_2:67894430-67894449 Msa0419730:CDS 40.0%
ATAACTGCAGTGTTCCTCAA+AGG - chr3_2:67894538-67894557 None:intergenic 40.0%
CTTAATGCAGTCCAACCATA+TGG - chr3_2:67894565-67894584 None:intergenic 40.0%
CATATGGTTGGACTGCATTA+AGG + chr3_2:67894563-67894582 Msa0419730:CDS 40.0%
ACCACATTTGCATATGGGAA+TGG + chr3_2:67894633-67894652 Msa0419730:CDS 40.0%
CCACATTTGCATATGGGAAT+GGG + chr3_2:67894634-67894653 Msa0419730:CDS 40.0%
CTGAGGCTGTTCATAAAGTT+AGG + chr3_2:67894668-67894687 Msa0419730:CDS 40.0%
CCACACTTAAGAGCTTCTTT+AGG - chr3_2:67894700-67894719 None:intergenic 40.0%
CCTAAAGAAGCTCTTAAGTG+TGG + chr3_2:67894697-67894716 Msa0419730:CDS 40.0%
ACAACATGCTCCACACAATC+TGG - chr3_2:67889338-67889357 None:intergenic 45.0%
TTGTGTGGAGCATGTTGTGA+TGG + chr3_2:67889340-67889359 Msa0419730:CDS 45.0%
TGTGTGGAGCATGTTGTGAT+GGG + chr3_2:67889341-67889360 Msa0419730:CDS 45.0%
TAATAGTTGGGCCTGGAAAC+TGG - chr3_2:67889376-67889395 None:intergenic 45.0%
! TCAGCTTTAATAGTTGGGCC+TGG - chr3_2:67889383-67889402 None:intergenic 45.0%
ACGAACAAGCTCCATACAGA+GGG + chr3_2:67889431-67889450 Msa0419730:CDS 45.0%
CAGAGGGAACTGTTATTCAC+TGG + chr3_2:67889447-67889466 Msa0419730:CDS 45.0%
GGAACTGTTATTCACTGGCA+TGG + chr3_2:67889452-67889471 Msa0419730:CDS 45.0%
TCACTGGCATGGAATTAGAC+AGG + chr3_2:67889463-67889482 Msa0419730:CDS 45.0%
! GTTTGCAGTTTGGAACTCCT+TGG + chr3_2:67889585-67889604 Msa0419730:intron 45.0%
GCATGGACATATATGCCACT+TGG - chr3_2:67889790-67889809 None:intergenic 45.0%
GTGTTAAATATGGTGCAGCC+TGG + chr3_2:67889918-67889937 Msa0419730:intron 45.0%
TTTGGTATGCAAAGAGCAGC+AGG + chr3_2:67889963-67889982 Msa0419730:CDS 45.0%
TTGGTATGCAAAGAGCAGCA+GGG + chr3_2:67889964-67889983 Msa0419730:CDS 45.0%
ATCTGCTCCTTAGTGATCTG+TGG + chr3_2:67890057-67890076 Msa0419730:CDS 45.0%
TTGTGTGCCACAGATCACTA+AGG - chr3_2:67890067-67890086 None:intergenic 45.0%
CACAAGCTCACATGAACAAG+AGG + chr3_2:67890082-67890101 Msa0419730:CDS 45.0%
AGCTCACATGAACAAGAGGT+TGG + chr3_2:67890086-67890105 Msa0419730:CDS 45.0%
GGTTCACCAATCCATCTCAT+TGG - chr3_2:67890125-67890144 None:intergenic 45.0%
TCTCTCTCCTGGGTAACTAA+CGG - chr3_2:67891040-67891059 None:intergenic 45.0%
TTAGTTACCCAGGAGAGAGA+GGG + chr3_2:67891040-67891059 Msa0419730:intron 45.0%
TAGTTGCCCGTTCTTTAACG+GGG + chr3_2:67891071-67891090 Msa0419730:intron 45.0%
TTGAGTCCCCGTTAAAGAAC+GGG - chr3_2:67891080-67891099 None:intergenic 45.0%
GGAGTGGTCCTTGTTAAGTA+AGG + chr3_2:67891132-67891151 Msa0419730:intron 45.0%
GCTCCCATATTTAGCTGCTA+GGG - chr3_2:67891826-67891845 None:intergenic 45.0%
TGCTCCCATATTTAGCTGCT+AGG - chr3_2:67891827-67891846 None:intergenic 45.0%
TGGCTCCACATGAAGAATCT+GGG - chr3_2:67891895-67891914 None:intergenic 45.0%
TTGGCTCCACATGAAGAATC+TGG - chr3_2:67891896-67891915 None:intergenic 45.0%
GATTGCTAGTACTACGTCCT+TGG + chr3_2:67891935-67891954 Msa0419730:CDS 45.0%
CATTAAACGGCTACTTGAGC+TGG - chr3_2:67892469-67892488 None:intergenic 45.0%
!!! GGTCCTTCGTCTTTTTCAAG+TGG - chr3_2:67893102-67893121 None:intergenic 45.0%
AAAGACGAAGGACCACGTTA+TGG + chr3_2:67893108-67893127 Msa0419730:intron 45.0%
TATACGAGGACTCCATAACG+TGG - chr3_2:67893123-67893142 None:intergenic 45.0%
TAGAGGGAATCACATCTTGC+AGG + chr3_2:67893246-67893265 Msa0419730:intron 45.0%
TGAGCACACCCAATCCAATT+TGG - chr3_2:67893491-67893510 None:intergenic 45.0%
! CTTATTGTGGTGGAAGCAGA+TGG + chr3_2:67893806-67893825 Msa0419730:CDS 45.0%
CGATGTCATCAACTGCGAAT+GGG - chr3_2:67893844-67893863 None:intergenic 45.0%
TCGATGTCATCAACTGCGAA+TGG - chr3_2:67893845-67893864 None:intergenic 45.0%
GATGACATCGACATCTACTC+AGG + chr3_2:67893854-67893873 Msa0419730:CDS 45.0%
TAGGGTCTTGGTCTGTTGTA+AGG - chr3_2:67893898-67893917 None:intergenic 45.0%
GTGTTCGGTATCGTTCCATA+AGG - chr3_2:67894047-67894066 None:intergenic 45.0%
TATTGAGGAGGAGAATCGTG+CGG - chr3_2:67894135-67894154 None:intergenic 45.0%
TTGCCAACCACACCTTACTT+AGG + chr3_2:67894211-67894230 Msa0419730:CDS 45.0%
GATCCTAAGTAAGGTGTGGT+TGG - chr3_2:67894217-67894236 None:intergenic 45.0%
ATTGGAAATCTCTCTGGTGG+TGG - chr3_2:67894277-67894296 None:intergenic 45.0%
ACCACCAGAGAGATTTCCAA+TGG + chr3_2:67894276-67894295 Msa0419730:CDS 45.0%
TCCATTGGAAATCTCTCTGG+TGG - chr3_2:67894280-67894299 None:intergenic 45.0%
CCGTTACCGGTAGTTGTATT+TGG - chr3_2:67894331-67894350 None:intergenic 45.0%
TCATGTCCATGCAAATGCCA+TGG - chr3_2:67894439-67894458 None:intergenic 45.0%
!!! TGGGTTTTGGGATATGGTGA+AGG + chr3_2:67894463-67894482 Msa0419730:CDS 45.0%
!!! GGGTTTTGGGATATGGTGAA+GGG + chr3_2:67894464-67894483 Msa0419730:CDS 45.0%
ATTTGACACGTGCACCTTTG+AGG + chr3_2:67894521-67894540 Msa0419730:CDS 45.0%
! AGGTTTAAGGCAGATAACCC+TGG + chr3_2:67894583-67894602 Msa0419730:CDS 45.0%
AATGGAATGCCCAAACACCA+GGG - chr3_2:67894603-67894622 None:intergenic 45.0%
CCCATTCCCATATGCAAATG+TGG - chr3_2:67894637-67894656 None:intergenic 45.0%
!! AAATTTCAAAAATAAAATAA+AGG + chr3_2:67891506-67891525 Msa0419730:intron 5.0%
!! TTAAAATTATAATTTAATCA+TGG + chr3_2:67891555-67891574 Msa0419730:intron 5.0%
!! TTAAAAATCATTAATTAATA+TGG + chr3_2:67892867-67892886 Msa0419730:intron 5.0%
GGAATCAATGGCCAGTTTCC+AGG + chr3_2:67889362-67889381 Msa0419730:CDS 50.0%
! CTGTATGGAGCTTGTTCGTG+AGG - chr3_2:67889430-67889449 None:intergenic 50.0%
CACGAACAAGCTCCATACAG+AGG + chr3_2:67889430-67889449 Msa0419730:CDS 50.0%
! TTTGGAACTCCTTGGGCTGA+TGG + chr3_2:67889593-67889612 Msa0419730:CDS 50.0%
ATCTCATTGGGGCTGAAGAG+AGG - chr3_2:67890112-67890131 None:intergenic 50.0%
TCTCTTCAGCCCCAATGAGA+TGG + chr3_2:67890111-67890130 Msa0419730:CDS 50.0%
TCAGCCCCAATGAGATGGAT+TGG + chr3_2:67890116-67890135 Msa0419730:CDS 50.0%
!! GAGATGGATTGGTGAACCAC+AGG + chr3_2:67890127-67890146 Msa0419730:CDS 50.0%
TGTCACGTGGGGTCCATTTA+AGG - chr3_2:67890772-67890791 None:intergenic 50.0%
CTCTCTCCTGGGTAACTAAC+GGG - chr3_2:67891039-67891058 None:intergenic 50.0%
GTTAGTTACCCAGGAGAGAG+AGG + chr3_2:67891039-67891058 Msa0419730:intron 50.0%
ATAAGGACCCTCTCTCTCCT+GGG - chr3_2:67891050-67891069 None:intergenic 50.0%
TATAAGGACCCTCTCTCTCC+TGG - chr3_2:67891051-67891070 None:intergenic 50.0%
TGTTAAGGACCCTCCATTGG+AGG - chr3_2:67891111-67891130 None:intergenic 50.0%
TCCAATGGAGGGTCCTTAAC+AGG + chr3_2:67891110-67891129 Msa0419730:intron 50.0%
CCAATGGAGGGTCCTTAACA+GGG + chr3_2:67891111-67891130 Msa0419730:intron 50.0%
ACAAGGACCACTCCCTGTTA+AGG - chr3_2:67891126-67891145 None:intergenic 50.0%
AAATGGGCCACCTAGTTGCA+AGG - chr3_2:67891195-67891214 None:intergenic 50.0%
! AGCTTGCTCATCAATGGACG+AGG + chr3_2:67891786-67891805 Msa0419730:CDS 50.0%
TGCACCCCAGATTCTTCATG+TGG + chr3_2:67891887-67891906 Msa0419730:CDS 50.0%
GGCTCCACATGAAGAATCTG+GGG - chr3_2:67891894-67891913 None:intergenic 50.0%
GTCCTTGGCTTCTCTCAACT+TGG + chr3_2:67891950-67891969 Msa0419730:CDS 50.0%
CCTCGTGAGTTAAGCTCAGT+TGG - chr3_2:67892673-67892692 None:intergenic 50.0%
CCAACTGAGCTTAACTCACG+AGG + chr3_2:67892670-67892689 Msa0419730:intron 50.0%
! GCATAGTGATTGGTCGGAGT+TGG + chr3_2:67893176-67893195 Msa0419730:intron 50.0%
GGAGTTGGCATGTGAAACAC+TGG + chr3_2:67893191-67893210 Msa0419730:intron 50.0%
GGTGTTAGAGGCAGAAAACC+AGG + chr3_2:67893941-67893960 Msa0419730:CDS 50.0%
!! GTGACTGGTGGTGGTAATGT+TGG - chr3_2:67894022-67894041 None:intergenic 50.0%
! TTCCATAAGGGTGTGACTGG+TGG - chr3_2:67894034-67894053 None:intergenic 50.0%
! TCGTTCCATAAGGGTGTGAC+TGG - chr3_2:67894037-67894056 None:intergenic 50.0%
! TGGCTGTGGAGTTCCCATTT+TGG - chr3_2:67894098-67894117 None:intergenic 50.0%
GGTGAAGGGAGATTTAGACC+AGG + chr3_2:67894478-67894497 Msa0419730:CDS 50.0%
AGGCAGATAACCCTGGTGTT+TGG + chr3_2:67894590-67894609 Msa0419730:CDS 50.0%
GGCAGATAACCCTGGTGTTT+GGG + chr3_2:67894591-67894610 Msa0419730:CDS 50.0%
CAATGGAATGCCCAAACACC+AGG - chr3_2:67894604-67894623 None:intergenic 50.0%
ATACTATTCACGCGGGGAGT+TGG - chr3_2:67894912-67894931 None:intergenic 50.0%
TCCCCGCGTGAATAGTATGT+AGG + chr3_2:67894914-67894933 Msa0419730:three_prime_UTR 50.0%
CCCTACATACTATTCACGCG+GGG - chr3_2:67894918-67894937 None:intergenic 50.0%
CCCCGCGTGAATAGTATGTA+GGG + chr3_2:67894915-67894934 Msa0419730:three_prime_UTR 50.0%
CCCCTACATACTATTCACGC+GGG - chr3_2:67894919-67894938 None:intergenic 50.0%
CCCGCGTGAATAGTATGTAG+GGG + chr3_2:67894916-67894935 Msa0419730:three_prime_UTR 50.0%
CCCCCTACATACTATTCACG+CGG - chr3_2:67894920-67894939 None:intergenic 50.0%
CCGCGTGAATAGTATGTAGG+GGG + chr3_2:67894917-67894936 Msa0419730:three_prime_UTR 50.0%
CAAAGAGCAGCAGGGCTGTA+TGG + chr3_2:67889972-67889991 Msa0419730:CDS 55.0%
GTGGAACCCGTTAGTTACCC+AGG + chr3_2:67891030-67891049 Msa0419730:intron 55.0%
CCCTGTTAAGGACCCTCCAT+TGG - chr3_2:67891114-67891133 None:intergenic 55.0%
! GGCCAAGTTGAGAGAAGCCA+AGG - chr3_2:67891955-67891974 None:intergenic 55.0%
! TGGGTGTGCTCAAAGCACCA+TGG + chr3_2:67893499-67893518 Msa0419730:intron 55.0%
! CATAAGGGTGTGACTGGTGG+TGG - chr3_2:67894031-67894050 None:intergenic 55.0%
CACCACCAGTCACACCCTTA+TGG + chr3_2:67894029-67894048 Msa0419730:CDS 55.0%
GCAGCAGTTCCATCAGCCCA+AGG - chr3_2:67889605-67889624 None:intergenic 60.0%
GGAGGGTCCTTAACAGGGAG+TGG + chr3_2:67891116-67891135 Msa0419730:intron 60.0%
! CAAGGTTCGGGTTCGAACCC+TGG - chr3_2:67892628-67892647 None:intergenic 60.0%
GTTAGGGCTTGTGGTGTGCC+TGG - chr3_2:67893962-67893981 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 67889129 67895081 67889129 ID=Msa0419730;Name=Msa0419730
chr3_2 mRNA 67889129 67895081 67889129 ID=Msa0419730-mRNA-1;Parent=Msa0419730;Name=Msa0419730-mRNA-1;_AED=0.05;_eAED=0.05;_QI=95|1|1|1|1|1|5|349|565
chr3_2 exon 67889129 67889484 67889129 ID=Msa0419730-mRNA-1:exon:15913;Parent=Msa0419730-mRNA-1
chr3_2 exon 67889593 67889685 67889593 ID=Msa0419730-mRNA-1:exon:15914;Parent=Msa0419730-mRNA-1
chr3_2 exon 67889936 67890148 67889936 ID=Msa0419730-mRNA-1:exon:15915;Parent=Msa0419730-mRNA-1
chr3_2 exon 67891786 67891980 67891786 ID=Msa0419730-mRNA-1:exon:15916;Parent=Msa0419730-mRNA-1
chr3_2 exon 67893797 67895081 67893797 ID=Msa0419730-mRNA-1:exon:15917;Parent=Msa0419730-mRNA-1
chr3_2 five_prime_UTR 67889129 67889223 67889129 ID=Msa0419730-mRNA-1:five_prime_utr;Parent=Msa0419730-mRNA-1
chr3_2 CDS 67889224 67889484 67889224 ID=Msa0419730-mRNA-1:cds;Parent=Msa0419730-mRNA-1
chr3_2 CDS 67889593 67889685 67889593 ID=Msa0419730-mRNA-1:cds;Parent=Msa0419730-mRNA-1
chr3_2 CDS 67889936 67890148 67889936 ID=Msa0419730-mRNA-1:cds;Parent=Msa0419730-mRNA-1
chr3_2 CDS 67891786 67891980 67891786 ID=Msa0419730-mRNA-1:cds;Parent=Msa0419730-mRNA-1
chr3_2 CDS 67893797 67894732 67893797 ID=Msa0419730-mRNA-1:cds;Parent=Msa0419730-mRNA-1
chr3_2 three_prime_UTR 67894733 67895081 67894733 ID=Msa0419730-mRNA-1:three_prime_utr;Parent=Msa0419730-mRNA-1
Gene Sequence

>Msa0419730

ATGAGTTTGCTGAAAGCAGTTTTTGTTTGGTGCATATGGTTAGGGTTATTTGAGTTATCATTAGCAAAAGTGAGACACTACAAGTTTGATGTTGAATACATATACAAAAAGCCAGATTGTGTGGAGCATGTTGTGATGGGAATCAATGGCCAGTTTCCAGGCCCAACTATTAAAGCTGAAGTTAATGACACTCTTGTCATTGACCTCACGAACAAGCTCCATACAGAGGGAACTGTTATTCACTGGCATGGAATTAGACAGTTTGGAACTCCTTGGGCTGATGGAACTGCTGCAATCTCTCAGTGTGCTATAAATCCAGGAGAAACTTTTCAATACAGATTCAAAGTTGACAGGCCTGGTACATATTTCTATCATGGACATTTTGGTATGCAAAGAGCAGCAGGGCTGTATGGTTCTCTAATAGTGGATTTACCAAAGGAACAAAGAGAGCCATTTCATTATGATGGTGAGTTTAATCTGCTCCTTAGTGATCTGTGGCACACAAGCTCACATGAACAAGAGGTTGGCCTCTCTTCAGCCCCAATGAGATGGATTGGTGAACCACAGAGCTTGCTCATCAATGGACGAGGACAGTTCAATTGTTCCCTAGCAGCTAAATATGGGAGCACCAACCTACAACAATGCAATTTGAAAGGTGGTGAAGAATGTGCACCCCAGATTCTTCATGTGGAGCCAAAAAAGACCTACAGAATAAGGATTGCTAGTACTACGTCCTTGGCTTCTCTCAACTTGGCCATTTCAAATCACAAACTTATTGTGGTGGAAGCAGATGGAAACTACGTGCACCCATTCGCAGTTGATGACATCGACATCTACTCAGGTGAAACCTACTCAGTACTCCTTACAACAGACCAAGACCCTAAAAAAAACTACTGGCTTTCAATTGGTGTTAGAGGCAGAAAACCAGGCACACCACAAGCCCTAACAATCCTTAACTACAAAACAATCTCTGCCTCAGTTTTTCCAACATTACCACCACCAGTCACACCCTTATGGAACGATACCGAACACAGCAAAGCATTCACAAAACAAATCATTTCCAAAATGGGAACTCCACAGCCACCGAAATCCTCACACCGCACGATTCTCCTCCTCAATACACAAAACAAAATCGGTAGTTTCACTAAATGGGCTATTAACAATGTTTCATTAACATTGCCAACCACACCTTACTTAGGATCAATCAAATTTAAGCTAAACAATACATTTGATAGAAATCCACCACCAGAGAGATTTCCAATGGATTATGACATATTTAAAAATCCAGTTAATCCAAATACAACTACCGGTAACGGTGTTTACACGTTTCAGTTGAATGAGGTTGTTGATGTGATACTACAAAATGCAAACCAGTTAAATGGGAATGGTAGTGAAATTCATCCATGGCATTTGCATGGACATGATTTTTGGGTTTTGGGATATGGTGAAGGGAGATTTAGACCAGGTGTTGATGAGAAAAGTTTCAATTTGACACGTGCACCTTTGAGGAACACTGCAGTTATATTTCCATATGGTTGGACTGCATTAAGGTTTAAGGCAGATAACCCTGGTGTTTGGGCATTCCATTGTCACATTGAACCACATTTGCATATGGGAATGGGTGTTATTTTTGCTGAGGCTGTTCATAAAGTTAGGAACATACCTAAAGAAGCTCTTAAGTGTGGTGCTACAGCCTAG
Protein sequence

>Msa0419730

MSLLKAVFVWCIWLGLFELSLAKVRHYKFDVEYIYKKPDCVEHVVMGINGQFPGPTIKAEVNDTLVIDLTNKLHTEGTVIHWHGIRQFGTPWADGTAAISQCAINPGETFQYRFKVDRPGTYFYHGHFGMQRAAGLYGSLIVDLPKEQREPFHYDGEFNLLLSDLWHTSSHEQEVGLSSAPMRWIGEPQSLLINGRGQFNCSLAAKYGSTNLQQCNLKGGEECAPQILHVEPKKTYRIRIASTTSLASLNLAISNHKLIVVEADGNYVHPFAVDDIDIYSGETYSVLLTTDQDPKKNYWLSIGVRGRKPGTPQALTILNYKTISASVFPTLPPPVTPLWNDTEHSKAFTKQIISKMGTPQPPKSSHRTILLLNTQNKIGSFTKWAINNVSLTLPTTPYLGSIKFKLNNTFDRNPPPERFPMDYDIFKNPVNPNTTTGNGVYTFQLNEVVDVILQNANQLNGNGSEIHPWHLHGHDFWVLGYGEGRFRPGVDEKSFNLTRAPLRNTAVIFPYGWTALRFKADNPGVWAFHCHIEPHLHMGMGVIFAEAVHKVRNIPKEALKCGATA*