Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092910 | AES73431.1 | 95.732 | 164 | 7 | 0 | 1 | 164 | 1 | 164 | 2.86e-103 | 303 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092910 | sp|Q8VWQ5|WRK50_ARATH | 51.034 | 145 | 58 | 2 | 33 | 164 | 29 | 173 | 1.86e-40 | 137 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092910 | G7J8C4 | 95.732 | 164 | 7 | 0 | 1 | 164 | 1 | 164 | 1.37e-103 | 303 |
Gene ID | Type | Classification |
---|---|---|
Msa0092910 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0091930 | Msa0092910 | 0.810705 | 1.009079e-50 | -8.615850e-47 |
Msa0092910 | Msa0377800 | 0.819240 | 1.288342e-52 | -8.615850e-47 |
Msa0092910 | Msa0387660 | 0.803904 | 2.789545e-49 | -8.615850e-47 |
Msa0092910 | Msa0387690 | 0.809476 | 1.857115e-50 | -8.615850e-47 |
Msa0092910 | Msa0426600 | 0.821163 | 4.671450e-53 | -8.615850e-47 |
Msa0092910 | Msa0431440 | 0.985973 | 2.912743e-165 | -8.615850e-47 |
Msa0092910 | Msa0466010 | 0.810887 | 9.217995e-51 | -8.615850e-47 |
Msa0092910 | Msa0472910 | 0.810180 | 1.310581e-50 | -8.615850e-47 |
Msa0092910 | Msa0476330 | 0.968703 | 4.680037e-129 | -8.615850e-47 |
Msa0092910 | Msa0490380 | 0.824325 | 8.581203e-54 | -8.615850e-47 |
Msa0092910 | Msa0517570 | 0.810802 | 9.614404e-51 | -8.615850e-47 |
Msa0092910 | Msa0520330 | 0.981032 | 1.304168e-151 | -8.615850e-47 |
Msa0092910 | Msa0780350 | 0.821910 | 3.140746e-53 | -8.615850e-47 |
Msa0092910 | Msa0834030 | 0.818252 | 2.159988e-52 | -8.615850e-47 |
Msa0092910 | Msa0936550 | 0.820162 | 7.936217e-53 | -8.615850e-47 |
Msa0092910 | Msa0972770 | 0.801369 | 9.299752e-49 | -8.615850e-47 |
Msa0092910 | Msa1130390 | 0.821232 | 4.505613e-53 | -8.615850e-47 |
Msa0092910 | Msa1201200 | 0.837247 | 5.817696e-57 | -8.615850e-47 |
Msa0092910 | Msa1252960 | 0.831126 | 1.992154e-55 | -8.615850e-47 |
Msa0092910 | Msa1458510 | 0.828562 | 8.390529e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092910 | MtrunA17_Chr1g0150801 | 60.116 | 173 | 45 | 7 | 1 | 162 | 1 | 160 | 7.06e-61 | 186 |
Msa0092910 | MtrunA17_Chr8g0383251 | 48.052 | 154 | 66 | 6 | 9 | 160 | 23 | 164 | 6.58e-36 | 123 |
Msa0092910 | MtrunA17_Chr3g0136001 | 94.444 | 72 | 4 | 0 | 1 | 72 | 9 | 80 | 1.43e-35 | 119 |
Msa0092910 | MtrunA17_Chr1g0194481 | 63.095 | 84 | 31 | 0 | 79 | 162 | 133 | 216 | 3.64e-32 | 117 |
Msa0092910 | MtrunA17_Chr7g0270191 | 59.524 | 84 | 34 | 0 | 79 | 162 | 120 | 203 | 7.20e-32 | 115 |
Msa0092910 | MtrunA17_Chr2g0294231 | 69.333 | 75 | 23 | 0 | 88 | 162 | 187 | 261 | 4.51e-31 | 115 |
Msa0092910 | MtrunA17_Chr3g0129321 | 42.373 | 177 | 67 | 8 | 5 | 162 | 16 | 176 | 4.96e-31 | 111 |
Msa0092910 | MtrunA17_Chr5g0418781 | 66.250 | 80 | 26 | 1 | 81 | 160 | 102 | 180 | 3.08e-30 | 110 |
Msa0092910 | MtrunA17_Chr4g0051881 | 67.606 | 71 | 23 | 0 | 91 | 161 | 165 | 235 | 7.04e-30 | 111 |
Msa0092910 | MtrunA17_Chr3g0129361 | 60.811 | 74 | 29 | 0 | 87 | 160 | 127 | 200 | 1.56e-29 | 107 |
Msa0092910 | MtrunA17_Chr8g0386241 | 47.115 | 104 | 48 | 1 | 65 | 161 | 57 | 160 | 4.84e-29 | 105 |
Msa0092910 | MtrunA17_Chr7g0224801 | 63.768 | 69 | 25 | 0 | 93 | 161 | 82 | 150 | 3.26e-28 | 102 |
Msa0092910 | MtrunA17_Chr5g0443131 | 65.714 | 70 | 24 | 0 | 91 | 160 | 144 | 213 | 8.75e-28 | 105 |
Msa0092910 | MtrunA17_Chr8g0335811 | 46.729 | 107 | 51 | 1 | 60 | 160 | 104 | 210 | 9.06e-28 | 103 |
Msa0092910 | MtrunA17_Chr4g0068541 | 62.667 | 75 | 28 | 0 | 88 | 162 | 192 | 266 | 1.09e-27 | 106 |
Msa0092910 | MtrunA17_Chr5g0445311 | 59.211 | 76 | 31 | 0 | 85 | 160 | 345 | 420 | 1.66e-27 | 107 |
Msa0092910 | MtrunA17_Chr5g0445311 | 51.724 | 58 | 27 | 1 | 104 | 161 | 200 | 256 | 8.40e-12 | 62.4 |
Msa0092910 | MtrunA17_Chr3g0101131 | 60.526 | 76 | 30 | 0 | 85 | 160 | 396 | 471 | 2.10e-27 | 107 |
Msa0092910 | MtrunA17_Chr3g0101131 | 38.542 | 96 | 48 | 2 | 66 | 161 | 215 | 299 | 2.07e-12 | 63.9 |
Msa0092910 | MtrunA17_Chr3g0079691 | 58.228 | 79 | 33 | 0 | 82 | 160 | 473 | 551 | 3.14e-27 | 106 |
Msa0092910 | MtrunA17_Chr3g0079691 | 50.000 | 58 | 28 | 1 | 104 | 161 | 280 | 336 | 2.66e-12 | 63.9 |
Msa0092910 | MtrunA17_Chr8g0383351 | 58.667 | 75 | 30 | 1 | 87 | 160 | 142 | 216 | 3.46e-27 | 102 |
Msa0092910 | MtrunA17_Chr7g0218081 | 55.844 | 77 | 34 | 0 | 84 | 160 | 390 | 466 | 4.92e-27 | 105 |
Msa0092910 | MtrunA17_Chr7g0218081 | 50.877 | 57 | 27 | 1 | 104 | 160 | 228 | 283 | 8.00e-12 | 62.4 |
Msa0092910 | MtrunA17_Chr3g0106491 | 52.174 | 92 | 43 | 1 | 69 | 160 | 331 | 421 | 1.64e-26 | 104 |
Msa0092910 | MtrunA17_Chr3g0106491 | 47.222 | 72 | 33 | 2 | 94 | 161 | 184 | 254 | 8.94e-16 | 73.6 |
Msa0092910 | MtrunA17_Chr4g0004911 | 55.263 | 76 | 34 | 0 | 85 | 160 | 317 | 392 | 3.38e-26 | 103 |
Msa0092910 | MtrunA17_Chr4g0004911 | 51.724 | 58 | 28 | 0 | 104 | 161 | 184 | 241 | 3.44e-16 | 74.7 |
Msa0092910 | MtrunA17_Chr5g0418191 | 55.263 | 76 | 34 | 0 | 85 | 160 | 301 | 376 | 5.04e-26 | 102 |
Msa0092910 | MtrunA17_Chr5g0418191 | 50.877 | 57 | 27 | 1 | 104 | 160 | 151 | 206 | 4.48e-12 | 62.8 |
Msa0092910 | MtrunA17_Chr7g0243891 | 55.263 | 76 | 34 | 0 | 85 | 160 | 355 | 430 | 1.57e-25 | 101 |
Msa0092910 | MtrunA17_Chr7g0243891 | 55.172 | 58 | 25 | 1 | 104 | 161 | 216 | 272 | 1.22e-15 | 73.2 |
Msa0092910 | MtrunA17_Chr5g0432161 | 51.190 | 84 | 41 | 0 | 77 | 160 | 394 | 477 | 2.10e-25 | 101 |
Msa0092910 | MtrunA17_Chr5g0432161 | 53.448 | 58 | 26 | 1 | 104 | 161 | 244 | 300 | 5.38e-15 | 71.6 |
Msa0092910 | MtrunA17_Chr7g0249311 | 52.632 | 76 | 36 | 0 | 85 | 160 | 373 | 448 | 2.76e-25 | 100 |
Msa0092910 | MtrunA17_Chr7g0249311 | 44.048 | 84 | 39 | 3 | 81 | 164 | 163 | 238 | 1.90e-13 | 67.0 |
Msa0092910 | MtrunA17_Chr7g0249301 | 50.649 | 77 | 38 | 0 | 84 | 160 | 272 | 348 | 5.56e-25 | 99.0 |
Msa0092910 | MtrunA17_Chr7g0249301 | 46.250 | 80 | 35 | 3 | 81 | 160 | 46 | 117 | 2.11e-13 | 66.6 |
Msa0092910 | MtrunA17_Chr4g0042831 | 55.714 | 70 | 31 | 0 | 91 | 160 | 265 | 334 | 7.37e-24 | 95.9 |
Msa0092910 | MtrunA17_Chr4g0042831 | 49.123 | 57 | 29 | 0 | 104 | 160 | 145 | 201 | 1.39e-12 | 64.3 |
Msa0092910 | MtrunA17_Chr5g0447701 | 60.000 | 70 | 28 | 0 | 91 | 160 | 239 | 308 | 1.96e-23 | 94.7 |
Msa0092910 | MtrunA17_Chr7g0248721 | 56.410 | 78 | 33 | 1 | 84 | 161 | 121 | 197 | 3.41e-23 | 91.3 |
Msa0092910 | MtrunA17_Chr4g0051181 | 52.000 | 75 | 35 | 1 | 88 | 161 | 227 | 301 | 7.48e-23 | 94.0 |
Msa0092910 | MtrunA17_Chr7g0263531 | 53.623 | 69 | 32 | 0 | 92 | 160 | 349 | 417 | 1.50e-22 | 92.8 |
Msa0092910 | MtrunA17_Chr7g0263531 | 51.786 | 56 | 26 | 1 | 105 | 160 | 190 | 244 | 2.95e-12 | 63.5 |
Msa0092910 | MtrunA17_Chr1g0189391 | 54.167 | 72 | 32 | 1 | 90 | 160 | 83 | 154 | 2.45e-22 | 91.3 |
Msa0092910 | MtrunA17_Chr7g0270831 | 50.000 | 72 | 35 | 1 | 91 | 161 | 203 | 274 | 5.58e-22 | 91.3 |
Msa0092910 | MtrunA17_Chr3g0099641 | 43.529 | 85 | 47 | 1 | 77 | 160 | 224 | 308 | 7.16e-22 | 90.9 |
Msa0092910 | MtrunA17_Chr2g0333851 | 52.703 | 74 | 32 | 2 | 91 | 161 | 154 | 227 | 2.75e-21 | 88.2 |
Msa0092910 | MtrunA17_Chr4g0075201 | 45.455 | 88 | 47 | 1 | 75 | 161 | 238 | 325 | 3.70e-21 | 89.0 |
Msa0092910 | MtrunA17_Chr7g0238921 | 60.000 | 60 | 24 | 0 | 104 | 163 | 124 | 183 | 3.87e-21 | 87.8 |
Msa0092910 | MtrunA17_Chr2g0288871 | 42.000 | 100 | 57 | 1 | 63 | 161 | 264 | 363 | 8.20e-21 | 88.2 |
Msa0092910 | MtrunA17_Chr7g0216891 | 51.389 | 72 | 34 | 1 | 91 | 161 | 206 | 277 | 8.64e-21 | 88.2 |
Msa0092910 | MtrunA17_Chr1g0188941 | 46.575 | 73 | 39 | 0 | 88 | 160 | 35 | 107 | 1.96e-20 | 81.3 |
Msa0092910 | MtrunA17_Chr4g0074001 | 54.286 | 70 | 32 | 0 | 91 | 160 | 346 | 415 | 2.57e-20 | 86.7 |
Msa0092910 | MtrunA17_Chr5g0401821 | 40.678 | 118 | 63 | 3 | 44 | 160 | 145 | 256 | 2.66e-20 | 84.7 |
Msa0092910 | MtrunA17_Chr4g0060271 | 43.750 | 80 | 44 | 1 | 82 | 160 | 233 | 312 | 1.15e-19 | 85.1 |
Msa0092910 | MtrunA17_Chr6g0485431 | 49.296 | 71 | 35 | 1 | 91 | 160 | 141 | 211 | 2.05e-19 | 83.6 |
Msa0092910 | MtrunA17_Chr4g0025051 | 39.252 | 107 | 57 | 2 | 63 | 161 | 287 | 393 | 1.42e-18 | 81.6 |
Msa0092910 | MtrunA17_Chr2g0302391 | 40.659 | 91 | 53 | 1 | 71 | 160 | 178 | 268 | 1.88e-18 | 81.3 |
Msa0092910 | MtrunA17_Chr2g0322391 | 48.000 | 75 | 38 | 1 | 87 | 160 | 332 | 406 | 2.35e-18 | 81.3 |
Msa0092910 | MtrunA17_Chr1g0147881 | 48.718 | 78 | 36 | 2 | 84 | 160 | 245 | 319 | 2.95e-18 | 80.1 |
Msa0092910 | MtrunA17_Chr1g0150281 | 44.737 | 76 | 39 | 2 | 88 | 160 | 122 | 197 | 5.36e-18 | 78.6 |
Msa0092910 | MtrunA17_Chr4g0001361 | 52.459 | 61 | 28 | 1 | 102 | 161 | 160 | 220 | 6.45e-18 | 79.0 |
Msa0092910 | MtrunA17_Chr4g0025061 | 48.611 | 72 | 36 | 1 | 91 | 161 | 347 | 418 | 8.92e-18 | 79.3 |
Msa0092910 | MtrunA17_Chr8g0348311 | 41.111 | 90 | 50 | 3 | 74 | 162 | 127 | 214 | 1.47e-17 | 78.2 |
Msa0092910 | MtrunA17_Chr3g0136961 | 50.847 | 59 | 28 | 1 | 103 | 160 | 137 | 195 | 1.47e-17 | 77.8 |
Msa0092910 | MtrunA17_Chr4g0053281 | 46.154 | 78 | 38 | 2 | 84 | 160 | 249 | 323 | 2.90e-17 | 77.4 |
Msa0092910 | MtrunA17_Chr4g0071521 | 47.436 | 78 | 37 | 2 | 84 | 160 | 228 | 302 | 1.45e-16 | 75.1 |
Msa0092910 | MtrunA17_Chr1g0184691 | 45.946 | 74 | 39 | 1 | 88 | 160 | 277 | 350 | 2.08e-16 | 75.1 |
Msa0092910 | MtrunA17_Chr7g0270051 | 56.897 | 58 | 24 | 1 | 105 | 161 | 54 | 111 | 2.88e-16 | 73.9 |
Msa0092910 | MtrunA17_Chr5g0447711 | 46.377 | 69 | 37 | 0 | 92 | 160 | 218 | 286 | 4.34e-16 | 73.9 |
Msa0092910 | MtrunA17_Chr2g0293481 | 38.614 | 101 | 57 | 3 | 66 | 161 | 225 | 325 | 1.25e-15 | 73.2 |
Msa0092910 | MtrunA17_Chr7g0228941 | 48.438 | 64 | 32 | 1 | 101 | 163 | 49 | 112 | 1.46e-15 | 68.9 |
Msa0092910 | MtrunA17_Chr3g0139021 | 37.624 | 101 | 58 | 2 | 61 | 160 | 275 | 371 | 3.75e-15 | 71.6 |
Msa0092910 | MtrunA17_Chr1g0150271 | 45.000 | 60 | 32 | 1 | 102 | 160 | 99 | 158 | 4.35e-15 | 70.5 |
Msa0092910 | MtrunA17_Chr7g0248691 | 41.758 | 91 | 51 | 2 | 74 | 162 | 123 | 213 | 6.57e-15 | 70.9 |
Msa0092910 | MtrunA17_Chr8g0387501 | 51.667 | 60 | 28 | 1 | 103 | 161 | 128 | 187 | 8.53e-15 | 69.7 |
Msa0092910 | MtrunA17_Chr8g0379461 | 52.632 | 57 | 26 | 1 | 105 | 160 | 77 | 133 | 4.17e-14 | 67.8 |
Msa0092910 | MtrunA17_Chr4g0024391 | 33.645 | 107 | 63 | 2 | 63 | 161 | 181 | 287 | 6.40e-14 | 68.2 |
Msa0092910 | MtrunA17_Chr2g0319961 | 46.269 | 67 | 35 | 1 | 95 | 160 | 71 | 137 | 1.69e-13 | 66.2 |
Msa0092910 | MtrunA17_Chr3g0126391 | 48.333 | 60 | 28 | 1 | 103 | 159 | 132 | 191 | 4.59e-13 | 65.5 |
Msa0092910 | MtrunA17_Chr2g0284321 | 49.123 | 57 | 28 | 1 | 105 | 160 | 36 | 92 | 6.72e-13 | 63.9 |
Msa0092910 | MtrunA17_Chr5g0432071 | 49.123 | 57 | 28 | 1 | 104 | 160 | 104 | 159 | 1.49e-12 | 62.8 |
Msa0092910 | MtrunA17_Chr1g0202461 | 36.957 | 92 | 51 | 2 | 70 | 160 | 233 | 318 | 2.73e-12 | 63.5 |
Msa0092910 | MtrunA17_Chr5g0419241 | 46.667 | 45 | 24 | 0 | 87 | 131 | 60 | 104 | 2.78e-12 | 60.1 |
Msa0092910 | MtrunA17_Chr2g0315381 | 31.532 | 111 | 69 | 3 | 56 | 163 | 100 | 206 | 9.08e-12 | 61.6 |
Msa0092910 | MtrunA17_Chr2g0289181 | 44.444 | 63 | 34 | 1 | 99 | 160 | 9 | 71 | 1.83e-11 | 60.1 |
Msa0092910 | MtrunA17_Chr2g0315361 | 43.939 | 66 | 34 | 1 | 97 | 159 | 141 | 206 | 2.01e-11 | 60.8 |
Msa0092910 | MtrunA17_Chr7g0244981 | 47.458 | 59 | 28 | 1 | 104 | 159 | 122 | 180 | 3.36e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0092910 | AT5G26170.1 | 51.034 | 145 | 58 | 2 | 33 | 164 | 29 | 173 | 1.89e-41 | 137 |
Msa0092910 | AT5G64810.1 | 42.515 | 167 | 81 | 4 | 1 | 163 | 14 | 169 | 8.69e-39 | 130 |
Msa0092910 | AT4G18170.1 | 62.353 | 85 | 32 | 0 | 77 | 161 | 145 | 229 | 4.85e-32 | 117 |
Msa0092910 | AT2G47260.1 | 63.095 | 84 | 31 | 0 | 79 | 162 | 149 | 232 | 8.91e-32 | 116 |
Msa0092910 | AT5G49520.1 | 68.919 | 74 | 23 | 0 | 88 | 161 | 205 | 278 | 1.22e-31 | 117 |
Msa0092910 | AT1G29860.1 | 67.568 | 74 | 24 | 0 | 88 | 161 | 120 | 193 | 3.04e-31 | 114 |
Msa0092910 | AT4G39410.1 | 62.195 | 82 | 30 | 1 | 84 | 164 | 203 | 284 | 5.70e-31 | 114 |
Msa0092910 | AT1G69310.4 | 65.000 | 80 | 28 | 0 | 81 | 160 | 124 | 203 | 9.53e-31 | 112 |
Msa0092910 | AT1G69310.2 | 65.000 | 80 | 28 | 0 | 81 | 160 | 124 | 203 | 9.53e-31 | 112 |
Msa0092910 | AT1G69310.1 | 65.000 | 80 | 28 | 0 | 81 | 160 | 124 | 203 | 9.53e-31 | 112 |
Msa0092910 | AT3G62340.1 | 64.286 | 84 | 28 | 1 | 78 | 161 | 94 | 175 | 8.95e-30 | 110 |
Msa0092910 | AT2G44745.1 | 48.148 | 108 | 47 | 1 | 62 | 160 | 94 | 201 | 1.96e-28 | 105 |
Msa0092910 | AT1G64000.1 | 52.941 | 85 | 39 | 1 | 79 | 162 | 88 | 172 | 1.98e-28 | 104 |
Msa0092910 | AT5G46350.1 | 64.789 | 71 | 25 | 0 | 91 | 161 | 170 | 240 | 2.22e-28 | 107 |
Msa0092910 | AT5G13080.1 | 60.563 | 71 | 28 | 0 | 91 | 161 | 54 | 124 | 3.98e-28 | 102 |
Msa0092910 | AT4G26640.5 | 60.526 | 76 | 30 | 0 | 85 | 160 | 186 | 261 | 1.07e-27 | 106 |
Msa0092910 | AT4G26640.5 | 50.000 | 60 | 29 | 1 | 102 | 161 | 33 | 91 | 3.87e-12 | 63.5 |
Msa0092910 | AT4G26640.6 | 60.526 | 76 | 30 | 0 | 85 | 160 | 186 | 261 | 1.07e-27 | 106 |
Msa0092910 | AT4G26640.6 | 50.000 | 60 | 29 | 1 | 102 | 161 | 33 | 91 | 3.87e-12 | 63.5 |
Msa0092910 | AT4G26640.4 | 60.526 | 76 | 30 | 0 | 85 | 160 | 186 | 261 | 1.07e-27 | 106 |
Msa0092910 | AT4G26640.4 | 50.000 | 60 | 29 | 1 | 102 | 161 | 33 | 91 | 3.87e-12 | 63.5 |
Msa0092910 | AT4G26640.3 | 60.526 | 76 | 30 | 0 | 85 | 160 | 186 | 261 | 1.07e-27 | 106 |
Msa0092910 | AT4G26640.3 | 50.000 | 60 | 29 | 1 | 102 | 161 | 33 | 91 | 3.87e-12 | 63.5 |
Msa0092910 | AT4G26640.7 | 60.526 | 76 | 30 | 0 | 85 | 160 | 322 | 397 | 1.27e-27 | 107 |
Msa0092910 | AT4G26640.7 | 50.000 | 60 | 29 | 1 | 102 | 161 | 169 | 227 | 2.72e-12 | 63.9 |
Msa0092910 | AT4G26640.1 | 60.526 | 76 | 30 | 0 | 85 | 160 | 290 | 365 | 1.45e-27 | 107 |
Msa0092910 | AT4G26640.1 | 50.000 | 60 | 29 | 1 | 102 | 161 | 137 | 195 | 3.09e-12 | 63.9 |
Msa0092910 | AT4G26640.2 | 60.526 | 76 | 30 | 0 | 85 | 160 | 362 | 437 | 1.73e-27 | 107 |
Msa0092910 | AT4G26640.2 | 50.000 | 60 | 29 | 1 | 102 | 161 | 209 | 267 | 2.96e-12 | 63.9 |
Msa0092910 | AT3G01970.1 | 60.000 | 70 | 28 | 0 | 91 | 160 | 52 | 121 | 2.13e-27 | 100 |
Msa0092910 | AT2G46130.1 | 51.163 | 86 | 42 | 0 | 77 | 162 | 3 | 88 | 8.14e-27 | 97.8 |
Msa0092910 | AT5G07100.2 | 56.757 | 74 | 32 | 0 | 87 | 160 | 124 | 197 | 8.63e-27 | 100 |
Msa0092910 | AT5G07100.2 | 46.552 | 58 | 31 | 0 | 104 | 161 | 24 | 81 | 1.19e-13 | 66.2 |
Msa0092910 | AT5G07100.4 | 56.757 | 74 | 32 | 0 | 87 | 160 | 124 | 197 | 8.63e-27 | 100 |
Msa0092910 | AT5G07100.4 | 46.552 | 58 | 31 | 0 | 104 | 161 | 24 | 81 | 1.19e-13 | 66.2 |
Msa0092910 | AT5G07100.5 | 56.757 | 74 | 32 | 0 | 87 | 160 | 124 | 197 | 8.63e-27 | 100 |
Msa0092910 | AT5G07100.5 | 46.552 | 58 | 31 | 0 | 104 | 161 | 24 | 81 | 1.19e-13 | 66.2 |
Msa0092910 | AT5G07100.3 | 56.757 | 74 | 32 | 0 | 87 | 160 | 124 | 197 | 8.63e-27 | 100 |
Msa0092910 | AT5G07100.3 | 46.552 | 58 | 31 | 0 | 104 | 161 | 24 | 81 | 1.19e-13 | 66.2 |
Msa0092910 | AT5G56270.1 | 56.962 | 79 | 34 | 0 | 82 | 160 | 465 | 543 | 1.04e-26 | 105 |
Msa0092910 | AT5G56270.1 | 50.877 | 57 | 27 | 1 | 104 | 160 | 273 | 328 | 2.22e-12 | 64.3 |
Msa0092910 | AT5G41570.1 | 53.165 | 79 | 37 | 0 | 83 | 161 | 77 | 155 | 1.87e-26 | 99.0 |
Msa0092910 | AT5G07100.1 | 56.757 | 74 | 32 | 0 | 87 | 160 | 217 | 290 | 1.95e-26 | 102 |
Msa0092910 | AT5G07100.1 | 46.552 | 58 | 31 | 0 | 104 | 161 | 117 | 174 | 1.88e-13 | 67.0 |
Msa0092910 | AT4G04450.2 | 45.455 | 99 | 51 | 2 | 64 | 161 | 160 | 256 | 5.50e-26 | 102 |
Msa0092910 | AT4G26440.1 | 54.430 | 79 | 36 | 0 | 82 | 160 | 350 | 428 | 9.27e-26 | 102 |
Msa0092910 | AT4G26440.1 | 48.276 | 58 | 27 | 2 | 104 | 160 | 178 | 233 | 1.12e-11 | 62.4 |
Msa0092910 | AT1G69310.3 | 61.250 | 80 | 27 | 1 | 81 | 160 | 124 | 199 | 1.23e-25 | 99.4 |
Msa0092910 | AT1G13960.1 | 52.632 | 76 | 36 | 0 | 85 | 160 | 390 | 465 | 1.78e-25 | 101 |
Msa0092910 | AT1G13960.1 | 54.386 | 57 | 25 | 1 | 104 | 160 | 229 | 284 | 1.27e-13 | 67.8 |
Msa0092910 | AT2G38470.1 | 55.263 | 76 | 34 | 0 | 85 | 160 | 343 | 418 | 1.85e-25 | 101 |
Msa0092910 | AT2G38470.1 | 50.000 | 58 | 28 | 1 | 104 | 161 | 184 | 240 | 1.15e-13 | 68.2 |
Msa0092910 | AT1G13960.2 | 52.632 | 76 | 36 | 0 | 85 | 160 | 237 | 312 | 1.92e-25 | 100 |
Msa0092910 | AT1G13960.2 | 54.386 | 57 | 25 | 1 | 104 | 160 | 76 | 131 | 2.21e-13 | 67.0 |
Msa0092910 | AT2G21900.1 | 43.966 | 116 | 54 | 2 | 58 | 162 | 52 | 167 | 4.81e-25 | 95.9 |
Msa0092910 | AT3G01080.2 | 53.947 | 76 | 35 | 0 | 85 | 160 | 325 | 400 | 3.13e-24 | 97.8 |
Msa0092910 | AT3G01080.1 | 53.947 | 76 | 35 | 0 | 85 | 160 | 287 | 362 | 3.94e-24 | 97.4 |
Msa0092910 | AT2G03340.1 | 51.316 | 76 | 37 | 0 | 85 | 160 | 396 | 471 | 5.16e-24 | 97.4 |
Msa0092910 | AT2G03340.1 | 39.785 | 93 | 55 | 1 | 68 | 160 | 214 | 305 | 4.68e-13 | 66.2 |
Msa0092910 | AT2G30250.1 | 52.632 | 76 | 36 | 0 | 85 | 160 | 309 | 384 | 1.38e-23 | 95.5 |
Msa0092910 | AT4G04450.1 | 45.455 | 99 | 51 | 2 | 64 | 161 | 254 | 350 | 2.12e-22 | 93.2 |
Msa0092910 | AT1G62300.1 | 50.000 | 76 | 37 | 1 | 87 | 161 | 295 | 370 | 3.10e-22 | 92.8 |
Msa0092910 | AT5G15130.2 | 46.250 | 80 | 42 | 1 | 82 | 160 | 163 | 242 | 4.51e-22 | 92.0 |
Msa0092910 | AT5G15130.1 | 46.250 | 80 | 42 | 1 | 82 | 160 | 205 | 284 | 5.51e-22 | 92.0 |
Msa0092910 | AT1G68150.1 | 50.667 | 75 | 36 | 1 | 88 | 161 | 219 | 293 | 7.03e-22 | 90.9 |
Msa0092910 | AT2G04880.2 | 55.556 | 72 | 32 | 0 | 89 | 160 | 268 | 339 | 9.15e-22 | 90.9 |
Msa0092910 | AT2G04880.2 | 32.800 | 125 | 74 | 3 | 44 | 161 | 46 | 167 | 3.99e-12 | 63.5 |
Msa0092910 | AT2G46130.2 | 47.674 | 86 | 41 | 1 | 77 | 162 | 3 | 84 | 9.81e-22 | 84.7 |
Msa0092910 | AT2G04880.1 | 55.556 | 72 | 32 | 0 | 89 | 160 | 292 | 363 | 1.10e-21 | 90.9 |
Msa0092910 | AT2G04880.1 | 32.800 | 125 | 74 | 3 | 44 | 161 | 46 | 167 | 4.41e-12 | 63.5 |
Msa0092910 | AT1G55600.1 | 45.349 | 86 | 46 | 1 | 78 | 162 | 280 | 365 | 5.05e-21 | 89.0 |
Msa0092910 | AT4G30935.1 | 48.276 | 87 | 40 | 1 | 74 | 160 | 306 | 387 | 1.47e-20 | 87.8 |
Msa0092910 | AT2G25000.2 | 50.794 | 63 | 30 | 1 | 103 | 164 | 102 | 164 | 3.94e-20 | 84.0 |
Msa0092910 | AT2G25000.4 | 50.794 | 63 | 30 | 1 | 103 | 164 | 102 | 164 | 3.94e-20 | 84.0 |
Msa0092910 | AT4G31800.2 | 42.697 | 89 | 50 | 1 | 73 | 160 | 80 | 168 | 5.04e-20 | 84.0 |
Msa0092910 | AT4G01720.1 | 46.667 | 75 | 39 | 1 | 88 | 161 | 223 | 297 | 7.32e-20 | 85.9 |
Msa0092910 | AT1G18860.1 | 44.737 | 76 | 41 | 1 | 87 | 161 | 222 | 297 | 8.78e-20 | 85.5 |
Msa0092910 | AT2G25000.3 | 50.794 | 63 | 30 | 1 | 103 | 164 | 124 | 186 | 9.14e-20 | 83.2 |
Msa0092910 | AT4G31800.1 | 42.697 | 89 | 50 | 1 | 73 | 160 | 145 | 233 | 1.05e-19 | 84.0 |
Msa0092910 | AT2G25000.1 | 50.794 | 63 | 30 | 1 | 103 | 164 | 145 | 207 | 1.12e-19 | 83.6 |
Msa0092910 | AT4G22070.4 | 44.706 | 85 | 46 | 1 | 78 | 161 | 271 | 355 | 1.16e-19 | 85.1 |
Msa0092910 | AT4G22070.3 | 44.706 | 85 | 46 | 1 | 78 | 161 | 271 | 355 | 1.16e-19 | 85.1 |
Msa0092910 | AT4G22070.2 | 44.706 | 85 | 46 | 1 | 78 | 161 | 271 | 355 | 1.16e-19 | 85.1 |
Msa0092910 | AT4G22070.1 | 44.706 | 85 | 46 | 1 | 78 | 161 | 271 | 355 | 1.16e-19 | 85.1 |
Msa0092910 | AT5G43290.1 | 53.226 | 62 | 29 | 0 | 102 | 163 | 112 | 173 | 3.56e-19 | 82.0 |
Msa0092910 | AT2G37260.2 | 56.452 | 62 | 27 | 0 | 99 | 160 | 262 | 323 | 7.02e-19 | 82.4 |
Msa0092910 | AT2G37260.2 | 46.667 | 75 | 35 | 2 | 90 | 160 | 65 | 138 | 4.22e-12 | 63.2 |
Msa0092910 | AT2G37260.3 | 56.452 | 62 | 27 | 0 | 99 | 160 | 264 | 325 | 7.21e-19 | 82.0 |
Msa0092910 | AT2G37260.3 | 46.667 | 75 | 35 | 2 | 90 | 160 | 67 | 140 | 4.25e-12 | 63.2 |
Msa0092910 | AT2G37260.1 | 56.452 | 62 | 27 | 0 | 99 | 160 | 344 | 405 | 1.17e-18 | 82.0 |
Msa0092910 | AT2G37260.1 | 46.667 | 75 | 35 | 2 | 90 | 160 | 147 | 220 | 4.57e-12 | 63.2 |
Msa0092910 | AT2G30590.1 | 43.434 | 99 | 54 | 2 | 67 | 163 | 275 | 373 | 1.33e-18 | 81.6 |
Msa0092910 | AT3G04670.1 | 45.361 | 97 | 51 | 2 | 66 | 160 | 223 | 319 | 5.50e-18 | 79.7 |
Msa0092910 | AT1G80840.1 | 43.243 | 74 | 39 | 2 | 91 | 161 | 131 | 204 | 6.13e-18 | 79.3 |
Msa0092910 | AT5G28650.1 | 45.361 | 97 | 51 | 2 | 66 | 160 | 223 | 319 | 8.93e-18 | 79.0 |
Msa0092910 | AT2G23320.1 | 34.307 | 137 | 69 | 4 | 39 | 160 | 167 | 297 | 1.51e-17 | 78.2 |
Msa0092910 | AT4G24240.1 | 46.067 | 89 | 46 | 2 | 74 | 160 | 250 | 338 | 1.70e-17 | 78.6 |
Msa0092910 | AT4G31550.2 | 46.154 | 78 | 38 | 2 | 84 | 160 | 228 | 302 | 2.21e-17 | 77.8 |
Msa0092910 | AT4G31550.1 | 46.154 | 78 | 38 | 2 | 84 | 160 | 229 | 303 | 2.25e-17 | 77.8 |
Msa0092910 | AT1G30650.1 | 37.705 | 122 | 68 | 4 | 48 | 161 | 154 | 275 | 7.08e-17 | 77.0 |
Msa0092910 | AT2G24570.1 | 46.154 | 78 | 38 | 2 | 84 | 160 | 226 | 300 | 4.88e-16 | 74.3 |
Msa0092910 | AT1G29280.1 | 53.448 | 58 | 26 | 1 | 105 | 161 | 75 | 132 | 5.98e-16 | 73.2 |
Msa0092910 | AT5G52830.1 | 58.621 | 58 | 23 | 1 | 105 | 161 | 166 | 223 | 6.96e-16 | 73.9 |
Msa0092910 | AT2G34830.1 | 40.385 | 104 | 54 | 4 | 66 | 161 | 170 | 273 | 9.83e-16 | 73.9 |
Msa0092910 | AT2G34830.2 | 40.385 | 104 | 54 | 4 | 66 | 161 | 179 | 282 | 1.10e-15 | 73.6 |
Msa0092910 | AT4G01250.1 | 35.644 | 101 | 62 | 2 | 63 | 162 | 89 | 187 | 1.21e-15 | 72.8 |
Msa0092910 | AT1G69810.2 | 43.210 | 81 | 44 | 2 | 83 | 161 | 124 | 204 | 2.58e-15 | 72.4 |
Msa0092910 | AT1G69810.1 | 43.210 | 81 | 44 | 2 | 83 | 161 | 182 | 262 | 3.52e-15 | 72.0 |
Msa0092910 | AT3G58710.1 | 50.000 | 68 | 33 | 1 | 95 | 161 | 62 | 129 | 4.58e-15 | 70.9 |
Msa0092910 | AT3G58710.2 | 50.000 | 68 | 33 | 1 | 95 | 161 | 61 | 128 | 4.72e-15 | 70.9 |
Msa0092910 | AT4G23550.1 | 47.619 | 63 | 32 | 1 | 99 | 160 | 135 | 197 | 8.06e-14 | 67.8 |
Msa0092910 | AT5G45050.1 | 47.297 | 74 | 32 | 2 | 95 | 161 | 1165 | 1238 | 1.69e-13 | 67.8 |
Msa0092910 | AT5G45050.4 | 47.297 | 74 | 32 | 2 | 95 | 161 | 1026 | 1099 | 1.77e-13 | 67.8 |
Msa0092910 | AT5G45050.2 | 47.297 | 74 | 32 | 2 | 95 | 161 | 1137 | 1210 | 1.91e-13 | 67.4 |
Msa0092910 | AT1G66600.1 | 48.438 | 64 | 30 | 1 | 103 | 163 | 102 | 165 | 3.38e-12 | 62.8 |
Msa0092910 | AT1G66560.1 | 49.153 | 59 | 27 | 1 | 104 | 159 | 103 | 161 | 4.52e-12 | 62.4 |
Msa0092910 | AT1G66550.1 | 35.000 | 100 | 61 | 2 | 67 | 163 | 72 | 170 | 7.37e-12 | 62.0 |
Msa0092910 | AT2G46400.1 | 38.542 | 96 | 54 | 2 | 69 | 159 | 67 | 162 | 8.08e-12 | 62.4 |
Msa0092910 | AT5G01900.1 | 33.684 | 95 | 60 | 1 | 67 | 158 | 73 | 167 | 8.36e-12 | 62.0 |
Msa0092910 | AT3G56400.1 | 36.585 | 82 | 49 | 1 | 81 | 159 | 97 | 178 | 1.95e-11 | 61.2 |
Msa0092910 | AT1G66550.2 | 36.905 | 84 | 50 | 1 | 83 | 163 | 82 | 165 | 2.60e-11 | 60.5 |
Find 45 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATGAATTAGTAGGTGATTT+TGG | 0.165572 | 1_2:+75691657 | Msa0092910:CDS |
TCAGGTGAATTTGGTGATAT+TGG | 0.252768 | 1_2:-75691504 | None:intergenic |
CAAGTCAGAGGTTGAAATTC+TGG | 0.266650 | 1_2:+75692156 | Msa0092910:CDS |
CAAAACTAGCTACCACTATT+TGG | 0.274475 | 1_2:+75692538 | Msa0092910:three_prime_UTR |
TACTAGAAGACCCCTCAATT+TGG | 0.293580 | 1_2:-75691692 | None:intergenic |
TGAAATTTGATGATGATATA+TGG | 0.328388 | 1_2:+75691571 | Msa0092910:CDS |
CAAATAGTGGTAGCTAGTTT+TGG | 0.340398 | 1_2:-75692537 | None:intergenic |
AAATCGCTGTCAGGTGAATT+TGG | 0.343453 | 1_2:-75691513 | None:intergenic |
CTTGTTGAATGTCACGGTTC+AGG | 0.355014 | 1_2:-75691632 | None:intergenic |
ATAGGAGGTGTCAGCAATAA+AGG | 0.363243 | 1_2:+75692091 | Msa0092910:intron |
TGTAGATGTTACCTTGGATT+GGG | 0.377512 | 1_2:-75692229 | None:intergenic |
TTGTTTACAGGAACTACTAT+AGG | 0.382242 | 1_2:+75692379 | Msa0092910:intron |
CAGAATTTCAACCTCTGACT+TGG | 0.388820 | 1_2:-75692155 | None:intergenic |
TTTCACCAACCAGTGGCCTT+TGG | 0.391392 | 1_2:+75691533 | Msa0092910:CDS |
GAGGTTGAAATTCTGGATGA+TGG | 0.407475 | 1_2:+75692163 | Msa0092910:CDS |
AAATTCTGGATGATGGGTTC+AGG | 0.414441 | 1_2:+75692170 | Msa0092910:CDS |
CAACAAGCTAATGAATTAGT+AGG | 0.439335 | 1_2:+75691648 | Msa0092910:CDS |
TAGGTTGTTATTACATAACT+TGG | 0.446464 | 1_2:-75692456 | None:intergenic |
AACTTGATCTAGTGAAAACT+TGG | 0.453876 | 1_2:-75692498 | None:intergenic |
ATGTAGATGTTACCTTGGAT+TGG | 0.470249 | 1_2:-75692230 | None:intergenic |
AGATGCATTTGACCAAATAG+TGG | 0.485741 | 1_2:-75692550 | None:intergenic |
AATGGCTCAGTATCATCATC+TGG | 0.498163 | 1_2:-75691594 | None:intergenic |
TGGATGATGGGTTCAGGTGG+AGG | 0.514242 | 1_2:+75692176 | Msa0092910:CDS |
TACTATAGGTGTTCAGTGGA+TGG | 0.515134 | 1_2:+75692393 | Msa0092910:CDS |
CATTAGCTTGTTGAATGTCA+CGG | 0.515880 | 1_2:-75691638 | None:intergenic |
GGGTTCAGGTGGAGGAAGTA+CGG | 0.526912 | 1_2:+75692184 | Msa0092910:CDS |
AGGTTGAAATTCTGGATGAT+GGG | 0.535485 | 1_2:+75692164 | Msa0092910:CDS |
AGGAAGTGGAAGCCAAATTG+AGG | 0.537025 | 1_2:+75691680 | Msa0092910:CDS |
GGAAGTGGAAGCCAAATTGA+GGG | 0.538634 | 1_2:+75691681 | Msa0092910:CDS |
CAGCAATAAAGGTGAGAAGA+AGG | 0.542475 | 1_2:+75692102 | Msa0092910:CDS |
TGGTTGGTGAAATCGCTGTC+AGG | 0.551897 | 1_2:-75691522 | None:intergenic |
GAGGAAGTACGGAAAGAAGA+TGG | 0.552357 | 1_2:+75692195 | Msa0092910:CDS |
AAAGAGAGTTGAGAGAGATG+TGG | 0.568317 | 1_2:+75692428 | Msa0092910:CDS |
TTCTGGATGATGGGTTCAGG+TGG | 0.569211 | 1_2:+75692173 | Msa0092910:CDS |
AGGACATGTTCAGAAACAAA+TGG | 0.569897 | 1_2:-75691612 | None:intergenic |
CAGAGAGTTCCAAAGGCCAC+TGG | 0.574642 | 1_2:-75691542 | None:intergenic |
TGCATTCAAAACCAAGTCAG+AGG | 0.595589 | 1_2:+75692144 | Msa0092910:CDS |
AAGTACTCAGAGAGTTCCAA+AGG | 0.612038 | 1_2:-75691549 | None:intergenic |
ATGAGTATGTGTGCCTTCGT+AGG | 0.623197 | 1_2:-75692475 | None:intergenic |
GTAGATGTTACCTTGGATTG+GGG | 0.647468 | 1_2:-75692228 | None:intergenic |
GAACTACTATAGGTGTTCAG+TGG | 0.652914 | 1_2:+75692389 | Msa0092910:CDS |
GAGTTCCAAAGGCCACTGGT+TGG | 0.656594 | 1_2:-75691538 | None:intergenic |
TATGTAATAACAACCTACGA+AGG | 0.679326 | 1_2:+75692462 | Msa0092910:CDS |
GAAGTGGAAGCCAAATTGAG+GGG | 0.700715 | 1_2:+75691682 | Msa0092910:CDS |
ACAGCGATTTCACCAACCAG+TGG | 0.708904 | 1_2:+75691526 | Msa0092910:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTCATAATTTTTTTGTTAT+TGG | - | chr1_2:75691475-75691494 | None:intergenic | 15.0% |
!! | AGAAAGAAATTAAATTTATG+AGG | - | chr1_2:75692004-75692023 | None:intergenic | 15.0% |
!! | AATACATAATATATAAGAGA+TGG | - | chr1_2:75692335-75692354 | None:intergenic | 15.0% |
!!! | TGTCATAATTTTTTTGTTAT+TGG | - | chr1_2:75691475-75691494 | None:intergenic | 15.0% |
!! | AGAAAGAAATTAAATTTATG+AGG | - | chr1_2:75692004-75692023 | None:intergenic | 15.0% |
!! | AATACATAATATATAAGAGA+TGG | - | chr1_2:75692335-75692354 | None:intergenic | 15.0% |
!!! | TGAAATTTGATGATGATATA+TGG | + | chr1_2:75691571-75691590 | Msa0092910:CDS | 20.0% |
!!! | TACAATTTAATTTAGGAACT+TGG | - | chr1_2:75691723-75691742 | None:intergenic | 20.0% |
!! | AAATTAATTCATATACACGT+CGG | + | chr1_2:75691747-75691766 | Msa0092910:intron | 20.0% |
!!! | CATAGAAGATATTTTTTTGA+AGG | - | chr1_2:75692050-75692069 | None:intergenic | 20.0% |
!! | AAAAATATCTTCTATGTCAT+TGG | + | chr1_2:75692054-75692073 | Msa0092910:intron | 20.0% |
!!! | TGAAATTTGATGATGATATA+TGG | + | chr1_2:75691571-75691590 | Msa0092910:CDS | 20.0% |
!!! | TACAATTTAATTTAGGAACT+TGG | - | chr1_2:75691723-75691742 | None:intergenic | 20.0% |
!! | AAATTAATTCATATACACGT+CGG | + | chr1_2:75691747-75691766 | Msa0092910:intron | 20.0% |
!!! | CATAGAAGATATTTTTTTGA+AGG | - | chr1_2:75692050-75692069 | None:intergenic | 20.0% |
!! | AAAAATATCTTCTATGTCAT+TGG | + | chr1_2:75692054-75692073 | Msa0092910:intron | 20.0% |
!! | AATGAATTAGTAGGTGATTT+TGG | + | chr1_2:75691657-75691676 | Msa0092910:CDS | 25.0% |
!!! | TTGGTTTGTGTCATATTTAT+AGG | + | chr1_2:75692073-75692092 | Msa0092910:intron | 25.0% |
!! | GAATTTCCAAATTTGTTTAC+AGG | + | chr1_2:75692367-75692386 | Msa0092910:intron | 25.0% |
!! | TAGGTTGTTATTACATAACT+TGG | - | chr1_2:75692459-75692478 | None:intergenic | 25.0% |
!! | AATGAATTAGTAGGTGATTT+TGG | + | chr1_2:75691657-75691676 | Msa0092910:CDS | 25.0% |
!!! | TTGGTTTGTGTCATATTTAT+AGG | + | chr1_2:75692073-75692092 | Msa0092910:intron | 25.0% |
!! | GAATTTCCAAATTTGTTTAC+AGG | + | chr1_2:75692367-75692386 | Msa0092910:intron | 25.0% |
!! | TAGGTTGTTATTACATAACT+TGG | - | chr1_2:75692459-75692478 | None:intergenic | 25.0% |
CAACAAGCTAATGAATTAGT+AGG | + | chr1_2:75691648-75691667 | Msa0092910:CDS | 30.0% | |
!! | ACACATATGATTTGTTGACA+AGG | + | chr1_2:75691848-75691867 | Msa0092910:intron | 30.0% |
ACTGAGTTGCTTATAAAAAG+TGG | - | chr1_2:75691943-75691962 | None:intergenic | 30.0% | |
! | ACTTTTTATAAGCAACTCAG+TGG | + | chr1_2:75691942-75691961 | Msa0092910:intron | 30.0% |
GTTTGTGTCATATTTATAGG+AGG | + | chr1_2:75692076-75692095 | Msa0092910:intron | 30.0% | |
GTAGTTCCTGTAAACAAATT+TGG | - | chr1_2:75692376-75692395 | None:intergenic | 30.0% | |
TTGTTTACAGGAACTACTAT+AGG | + | chr1_2:75692379-75692398 | Msa0092910:intron | 30.0% | |
TATGTAATAACAACCTACGA+AGG | + | chr1_2:75692462-75692481 | Msa0092910:CDS | 30.0% | |
AACTTGATCTAGTGAAAACT+TGG | - | chr1_2:75692501-75692520 | None:intergenic | 30.0% | |
! | GTTTTCACTAGATCAAGTTT+TGG | + | chr1_2:75692502-75692521 | Msa0092910:exon | 30.0% |
CAACAAGCTAATGAATTAGT+AGG | + | chr1_2:75691648-75691667 | Msa0092910:CDS | 30.0% | |
!! | ACACATATGATTTGTTGACA+AGG | + | chr1_2:75691848-75691867 | Msa0092910:intron | 30.0% |
ACTGAGTTGCTTATAAAAAG+TGG | - | chr1_2:75691943-75691962 | None:intergenic | 30.0% | |
! | ACTTTTTATAAGCAACTCAG+TGG | + | chr1_2:75691942-75691961 | Msa0092910:intron | 30.0% |
GTTTGTGTCATATTTATAGG+AGG | + | chr1_2:75692076-75692095 | Msa0092910:intron | 30.0% | |
GTAGTTCCTGTAAACAAATT+TGG | - | chr1_2:75692376-75692395 | None:intergenic | 30.0% | |
TTGTTTACAGGAACTACTAT+AGG | + | chr1_2:75692379-75692398 | Msa0092910:intron | 30.0% | |
TATGTAATAACAACCTACGA+AGG | + | chr1_2:75692462-75692481 | Msa0092910:CDS | 30.0% | |
AACTTGATCTAGTGAAAACT+TGG | - | chr1_2:75692501-75692520 | None:intergenic | 30.0% | |
! | GTTTTCACTAGATCAAGTTT+TGG | + | chr1_2:75692502-75692521 | Msa0092910:exon | 30.0% |
! | TCAGGTGAATTTGGTGATAT+TGG | - | chr1_2:75691507-75691526 | None:intergenic | 35.0% |
AGGACATGTTCAGAAACAAA+TGG | - | chr1_2:75691615-75691634 | None:intergenic | 35.0% | |
!! | CATTAGCTTGTTGAATGTCA+CGG | - | chr1_2:75691641-75691660 | None:intergenic | 35.0% |
! | GAATTAGTAGGTGATTTTGG+AGG | + | chr1_2:75691660-75691679 | Msa0092910:CDS | 35.0% |
AGGTTGAAATTCTGGATGAT+GGG | + | chr1_2:75692164-75692183 | Msa0092910:CDS | 35.0% | |
TGTAGATGTTACCTTGGATT+GGG | - | chr1_2:75692232-75692251 | None:intergenic | 35.0% | |
ATGTAGATGTTACCTTGGAT+TGG | - | chr1_2:75692233-75692252 | None:intergenic | 35.0% | |
TTCACATGTAGATGTTACCT+TGG | - | chr1_2:75692238-75692257 | None:intergenic | 35.0% | |
!! | TCTCAACTCTCTTTTTCACT+TGG | - | chr1_2:75692422-75692441 | None:intergenic | 35.0% |
!! | ATCAAGTTTTGGCATCTTCA+TGG | + | chr1_2:75692513-75692532 | Msa0092910:three_prime_UTR | 35.0% |
!! | CAAATAGTGGTAGCTAGTTT+TGG | - | chr1_2:75692540-75692559 | None:intergenic | 35.0% |
CAAAACTAGCTACCACTATT+TGG | + | chr1_2:75692538-75692557 | Msa0092910:three_prime_UTR | 35.0% | |
AGATGCATTTGACCAAATAG+TGG | - | chr1_2:75692553-75692572 | None:intergenic | 35.0% | |
! | TCAGGTGAATTTGGTGATAT+TGG | - | chr1_2:75691507-75691526 | None:intergenic | 35.0% |
AGGACATGTTCAGAAACAAA+TGG | - | chr1_2:75691615-75691634 | None:intergenic | 35.0% | |
!! | CATTAGCTTGTTGAATGTCA+CGG | - | chr1_2:75691641-75691660 | None:intergenic | 35.0% |
! | GAATTAGTAGGTGATTTTGG+AGG | + | chr1_2:75691660-75691679 | Msa0092910:CDS | 35.0% |
AGGTTGAAATTCTGGATGAT+GGG | + | chr1_2:75692164-75692183 | Msa0092910:CDS | 35.0% | |
TGTAGATGTTACCTTGGATT+GGG | - | chr1_2:75692232-75692251 | None:intergenic | 35.0% | |
ATGTAGATGTTACCTTGGAT+TGG | - | chr1_2:75692233-75692252 | None:intergenic | 35.0% | |
TTCACATGTAGATGTTACCT+TGG | - | chr1_2:75692238-75692257 | None:intergenic | 35.0% | |
!! | TCTCAACTCTCTTTTTCACT+TGG | - | chr1_2:75692422-75692441 | None:intergenic | 35.0% |
!! | ATCAAGTTTTGGCATCTTCA+TGG | + | chr1_2:75692513-75692532 | Msa0092910:three_prime_UTR | 35.0% |
!! | CAAATAGTGGTAGCTAGTTT+TGG | - | chr1_2:75692540-75692559 | None:intergenic | 35.0% |
CAAAACTAGCTACCACTATT+TGG | + | chr1_2:75692538-75692557 | Msa0092910:three_prime_UTR | 35.0% | |
AGATGCATTTGACCAAATAG+TGG | - | chr1_2:75692553-75692572 | None:intergenic | 35.0% | |
AAATCGCTGTCAGGTGAATT+TGG | - | chr1_2:75691516-75691535 | None:intergenic | 40.0% | |
AAGTACTCAGAGAGTTCCAA+AGG | - | chr1_2:75691552-75691571 | None:intergenic | 40.0% | |
AATGGCTCAGTATCATCATC+TGG | - | chr1_2:75691597-75691616 | None:intergenic | 40.0% | |
TACTAGAAGACCCCTCAATT+TGG | - | chr1_2:75691695-75691714 | None:intergenic | 40.0% | |
!! | ATAGGAGGTGTCAGCAATAA+AGG | + | chr1_2:75692091-75692110 | Msa0092910:intron | 40.0% |
CAGCAATAAAGGTGAGAAGA+AGG | + | chr1_2:75692102-75692121 | Msa0092910:CDS | 40.0% | |
TGCATTCAAAACCAAGTCAG+AGG | + | chr1_2:75692144-75692163 | Msa0092910:CDS | 40.0% | |
CAGAATTTCAACCTCTGACT+TGG | - | chr1_2:75692158-75692177 | None:intergenic | 40.0% | |
CAAGTCAGAGGTTGAAATTC+TGG | + | chr1_2:75692156-75692175 | Msa0092910:CDS | 40.0% | |
GAGGTTGAAATTCTGGATGA+TGG | + | chr1_2:75692163-75692182 | Msa0092910:CDS | 40.0% | |
!! | AAATTCTGGATGATGGGTTC+AGG | + | chr1_2:75692170-75692189 | Msa0092910:CDS | 40.0% |
GTAGATGTTACCTTGGATTG+GGG | - | chr1_2:75692231-75692250 | None:intergenic | 40.0% | |
GAACTACTATAGGTGTTCAG+TGG | + | chr1_2:75692389-75692408 | Msa0092910:CDS | 40.0% | |
TACTATAGGTGTTCAGTGGA+TGG | + | chr1_2:75692393-75692412 | Msa0092910:CDS | 40.0% | |
AAAGAGAGTTGAGAGAGATG+TGG | + | chr1_2:75692428-75692447 | Msa0092910:CDS | 40.0% | |
AAATCGCTGTCAGGTGAATT+TGG | - | chr1_2:75691516-75691535 | None:intergenic | 40.0% | |
AAGTACTCAGAGAGTTCCAA+AGG | - | chr1_2:75691552-75691571 | None:intergenic | 40.0% | |
AATGGCTCAGTATCATCATC+TGG | - | chr1_2:75691597-75691616 | None:intergenic | 40.0% | |
TACTAGAAGACCCCTCAATT+TGG | - | chr1_2:75691695-75691714 | None:intergenic | 40.0% | |
!! | ATAGGAGGTGTCAGCAATAA+AGG | + | chr1_2:75692091-75692110 | Msa0092910:intron | 40.0% |
CAGCAATAAAGGTGAGAAGA+AGG | + | chr1_2:75692102-75692121 | Msa0092910:CDS | 40.0% | |
TGCATTCAAAACCAAGTCAG+AGG | + | chr1_2:75692144-75692163 | Msa0092910:CDS | 40.0% | |
CAGAATTTCAACCTCTGACT+TGG | - | chr1_2:75692158-75692177 | None:intergenic | 40.0% | |
CAAGTCAGAGGTTGAAATTC+TGG | + | chr1_2:75692156-75692175 | Msa0092910:CDS | 40.0% | |
GAGGTTGAAATTCTGGATGA+TGG | + | chr1_2:75692163-75692182 | Msa0092910:CDS | 40.0% | |
!! | AAATTCTGGATGATGGGTTC+AGG | + | chr1_2:75692170-75692189 | Msa0092910:CDS | 40.0% |
GTAGATGTTACCTTGGATTG+GGG | - | chr1_2:75692231-75692250 | None:intergenic | 40.0% | |
GAACTACTATAGGTGTTCAG+TGG | + | chr1_2:75692389-75692408 | Msa0092910:CDS | 40.0% | |
TACTATAGGTGTTCAGTGGA+TGG | + | chr1_2:75692393-75692412 | Msa0092910:CDS | 40.0% | |
AAAGAGAGTTGAGAGAGATG+TGG | + | chr1_2:75692428-75692447 | Msa0092910:CDS | 40.0% | |
CTTGTTGAATGTCACGGTTC+AGG | - | chr1_2:75691635-75691654 | None:intergenic | 45.0% | |
!! | GTAGGTGATTTTGGAGGAAG+TGG | + | chr1_2:75691666-75691685 | Msa0092910:CDS | 45.0% |
AGGAAGTGGAAGCCAAATTG+AGG | + | chr1_2:75691680-75691699 | Msa0092910:CDS | 45.0% | |
GGAAGTGGAAGCCAAATTGA+GGG | + | chr1_2:75691681-75691700 | Msa0092910:CDS | 45.0% | |
GAAGTGGAAGCCAAATTGAG+GGG | + | chr1_2:75691682-75691701 | Msa0092910:CDS | 45.0% | |
! | GAGGAAGTACGGAAAGAAGA+TGG | + | chr1_2:75692195-75692214 | Msa0092910:CDS | 45.0% |
TGAAAAACAGCCCCAATCCA+AGG | + | chr1_2:75692218-75692237 | Msa0092910:CDS | 45.0% | |
ATGAGTATGTGTGCCTTCGT+AGG | - | chr1_2:75692478-75692497 | None:intergenic | 45.0% | |
CTTGTTGAATGTCACGGTTC+AGG | - | chr1_2:75691635-75691654 | None:intergenic | 45.0% | |
!! | GTAGGTGATTTTGGAGGAAG+TGG | + | chr1_2:75691666-75691685 | Msa0092910:CDS | 45.0% |
AGGAAGTGGAAGCCAAATTG+AGG | + | chr1_2:75691680-75691699 | Msa0092910:CDS | 45.0% | |
GGAAGTGGAAGCCAAATTGA+GGG | + | chr1_2:75691681-75691700 | Msa0092910:CDS | 45.0% | |
GAAGTGGAAGCCAAATTGAG+GGG | + | chr1_2:75691682-75691701 | Msa0092910:CDS | 45.0% | |
! | GAGGAAGTACGGAAAGAAGA+TGG | + | chr1_2:75692195-75692214 | Msa0092910:CDS | 45.0% |
TGAAAAACAGCCCCAATCCA+AGG | + | chr1_2:75692218-75692237 | Msa0092910:CDS | 45.0% | |
ATGAGTATGTGTGCCTTCGT+AGG | - | chr1_2:75692478-75692497 | None:intergenic | 45.0% | |
!!! | TTTAAAATACAATTTAATTT+AGG | - | chr1_2:75691730-75691749 | None:intergenic | 5.0% |
!!! | TTTAAAATACAATTTAATTT+AGG | - | chr1_2:75691730-75691749 | None:intergenic | 5.0% |
!! | TGGTTGGTGAAATCGCTGTC+AGG | - | chr1_2:75691525-75691544 | None:intergenic | 50.0% |
ACAGCGATTTCACCAACCAG+TGG | + | chr1_2:75691526-75691545 | Msa0092910:CDS | 50.0% | |
TTTCACCAACCAGTGGCCTT+TGG | + | chr1_2:75691533-75691552 | Msa0092910:CDS | 50.0% | |
!! | TTCTGGATGATGGGTTCAGG+TGG | + | chr1_2:75692173-75692192 | Msa0092910:CDS | 50.0% |
!! | TGGTTGGTGAAATCGCTGTC+AGG | - | chr1_2:75691525-75691544 | None:intergenic | 50.0% |
ACAGCGATTTCACCAACCAG+TGG | + | chr1_2:75691526-75691545 | Msa0092910:CDS | 50.0% | |
TTTCACCAACCAGTGGCCTT+TGG | + | chr1_2:75691533-75691552 | Msa0092910:CDS | 50.0% | |
!! | TTCTGGATGATGGGTTCAGG+TGG | + | chr1_2:75692173-75692192 | Msa0092910:CDS | 50.0% |
GAGTTCCAAAGGCCACTGGT+TGG | - | chr1_2:75691541-75691560 | None:intergenic | 55.0% | |
CAGAGAGTTCCAAAGGCCAC+TGG | - | chr1_2:75691545-75691564 | None:intergenic | 55.0% | |
!! | TGGATGATGGGTTCAGGTGG+AGG | + | chr1_2:75692176-75692195 | Msa0092910:CDS | 55.0% |
GGGTTCAGGTGGAGGAAGTA+CGG | + | chr1_2:75692184-75692203 | Msa0092910:CDS | 55.0% | |
GAGTTCCAAAGGCCACTGGT+TGG | - | chr1_2:75691541-75691560 | None:intergenic | 55.0% | |
CAGAGAGTTCCAAAGGCCAC+TGG | - | chr1_2:75691545-75691564 | None:intergenic | 55.0% | |
!! | TGGATGATGGGTTCAGGTGG+AGG | + | chr1_2:75692176-75692195 | Msa0092910:CDS | 55.0% |
GGGTTCAGGTGGAGGAAGTA+CGG | + | chr1_2:75692184-75692203 | Msa0092910:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_2 | gene | 75691459 | 75692572 | 75691459 | ID=Msa0092910;Name=Msa0092910 |
chr1_2 | mRNA | 75691459 | 75692572 | 75691459 | ID=Msa0092910-mRNA-1;Parent=Msa0092910;Name=Msa0092910-mRNA-1;_AED=0.06;_eAED=0.06;_QI=30|1|1|1|1|1|3|60|164 |
chr1_2 | exon | 75691459 | 75691714 | 75691459 | ID=Msa0092910-mRNA-1:exon:26639;Parent=Msa0092910-mRNA-1 |
chr1_2 | exon | 75692095 | 75692239 | 75692095 | ID=Msa0092910-mRNA-1:exon:26640;Parent=Msa0092910-mRNA-1 |
chr1_2 | exon | 75692389 | 75692572 | 75692389 | ID=Msa0092910-mRNA-1:exon:26641;Parent=Msa0092910-mRNA-1 |
chr1_2 | five_prime_UTR | 75691459 | 75691488 | 75691459 | ID=Msa0092910-mRNA-1:five_prime_utr;Parent=Msa0092910-mRNA-1 |
chr1_2 | CDS | 75691489 | 75691714 | 75691489 | ID=Msa0092910-mRNA-1:cds;Parent=Msa0092910-mRNA-1 |
chr1_2 | CDS | 75692095 | 75692239 | 75692095 | ID=Msa0092910-mRNA-1:cds;Parent=Msa0092910-mRNA-1 |
chr1_2 | CDS | 75692389 | 75692512 | 75692389 | ID=Msa0092910-mRNA-1:cds;Parent=Msa0092910-mRNA-1 |
chr1_2 | three_prime_UTR | 75692513 | 75692572 | 75692513 | ID=Msa0092910-mRNA-1:three_prime_utr;Parent=Msa0092910-mRNA-1 |
Gene Sequence |
Protein sequence |