AlfalfaGEDB | Msa0476330

M. sativa cultivar zhongmu-4 / Msa0476330

KEGG: -
GO: GO:0001101 GO:0003674 GO:0003700 GO:0006355 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0008150 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009753 GO:0009755 GO:0009867 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0042221 GO:0043207 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071229 GO:0071310 GO:0071395 GO:0071495 GO:0080090 GO:0098542 GO:0140110 GO:1901700 GO:1901701 GO:1903506 GO:2000112 GO:2001141
PFAM: PF03106.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0476330	AES73431.1	95.732	164	7	0	1	164	1	164	2.86e-103	303

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0476330	sp\|Q8VWQ5\|WRK50_ARATH	51.034	145	58	2	33	164	29	173	1.86e-40	137

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0476330	G7J8C4	95.732	164	7	0	1	164	1	164	1.37e-103	303

TFs/TRs:

Gene ID	Type	Classification
Msa0476330	TF	WRKY

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0091930	Msa0476330	0.816936	4.276887e-52	-8.615850e-47
Msa0092910	Msa0476330	0.968703	4.680037e-129	-8.615850e-47
Msa0377800	Msa0476330	0.835626	1.504371e-56	-8.615850e-47
Msa0387660	Msa0476330	0.809998	1.433763e-50	-8.615850e-47
Msa0387690	Msa0476330	0.816366	5.739560e-52	-8.615850e-47
Msa0419670	Msa0476330	0.804937	1.699475e-49	-8.615850e-47
Msa0426600	Msa0476330	0.835789	1.367274e-56	-8.615850e-47
Msa0431440	Msa0476330	0.981941	7.844090e-154	-8.615850e-47
Msa0466010	Msa0476330	0.835223	1.901754e-56	-8.615850e-47
Msa0472910	Msa0476330	0.820151	7.981615e-53	-8.615850e-47
Msa0476330	Msa0490380	0.849593	2.926879e-60	-8.615850e-47
Msa0476330	Msa0517570	0.830282	3.206591e-55	-8.615850e-47
Msa0476330	Msa0518280	0.802854	4.603074e-49	-8.615850e-47
Msa0476330	Msa0520330	0.985558	6.112905e-164	-8.615850e-47
Msa0476330	Msa0574570	0.812884	3.387075e-51	-8.615850e-47
Msa0476330	Msa0650520	0.805067	1.596763e-49	-8.615850e-47
Msa0476330	Msa0692540	0.804214	2.404787e-49	-8.615850e-47
Msa0476330	Msa0780350	0.829298	5.566432e-55	-8.615850e-47
Msa0476330	Msa0801780	0.803888	2.812196e-49	-8.615850e-47
Msa0476330	Msa0834030	0.823264	1.520810e-53	-8.615850e-47
Msa0476330	Msa0870060	0.816417	5.589755e-52	-8.615850e-47
Msa0476330	Msa0870830	0.805106	1.566455e-49	-8.615850e-47
Msa0476330	Msa0936530	0.838569	2.660029e-57	-8.615850e-47
Msa0476330	Msa0936550	0.847299	1.262262e-59	-8.615850e-47
Msa0476330	Msa0972770	0.827979	1.159826e-54	-8.615850e-47
Msa0476330	Msa0973520	0.839585	1.450842e-57	-8.615850e-47
Msa0476330	Msa0982780	0.801472	8.859675e-49	-8.615850e-47
Msa0476330	Msa1130390	0.821780	3.365406e-53	-8.615850e-47
Msa0476330	Msa1201200	0.852284	5.107456e-61	-8.615850e-47
Msa0476330	Msa1238330	0.805190	1.504533e-49	-8.615850e-47
Msa0476330	Msa1252960	0.828734	7.627135e-55	-8.615850e-47
Msa0476330	Msa1317130	0.804581	2.016871e-49	-8.615850e-47
Msa0476330	Msa1458510	0.847723	9.654181e-60	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0476330	MtrunA17_Chr1g0150801	60.116	173	45	7	1	162	1	160	7.06e-61	186
Msa0476330	MtrunA17_Chr8g0383251	48.052	154	66	6	9	160	23	164	6.58e-36	123
Msa0476330	MtrunA17_Chr3g0136001	94.444	72	4	0	1	72	9	80	1.43e-35	119
Msa0476330	MtrunA17_Chr1g0194481	63.095	84	31	0	79	162	133	216	3.64e-32	117
Msa0476330	MtrunA17_Chr7g0270191	59.524	84	34	0	79	162	120	203	7.20e-32	115
Msa0476330	MtrunA17_Chr2g0294231	69.333	75	23	0	88	162	187	261	4.51e-31	115
Msa0476330	MtrunA17_Chr3g0129321	42.373	177	67	8	5	162	16	176	4.96e-31	111
Msa0476330	MtrunA17_Chr5g0418781	66.250	80	26	1	81	160	102	180	3.08e-30	110
Msa0476330	MtrunA17_Chr4g0051881	67.606	71	23	0	91	161	165	235	7.04e-30	111
Msa0476330	MtrunA17_Chr3g0129361	60.811	74	29	0	87	160	127	200	1.56e-29	107
Msa0476330	MtrunA17_Chr8g0386241	47.115	104	48	1	65	161	57	160	4.84e-29	105
Msa0476330	MtrunA17_Chr7g0224801	63.768	69	25	0	93	161	82	150	3.26e-28	102
Msa0476330	MtrunA17_Chr5g0443131	65.714	70	24	0	91	160	144	213	8.75e-28	105
Msa0476330	MtrunA17_Chr8g0335811	46.729	107	51	1	60	160	104	210	9.06e-28	103
Msa0476330	MtrunA17_Chr4g0068541	62.667	75	28	0	88	162	192	266	1.09e-27	106
Msa0476330	MtrunA17_Chr5g0445311	59.211	76	31	0	85	160	345	420	1.66e-27	107
Msa0476330	MtrunA17_Chr5g0445311	51.724	58	27	1	104	161	200	256	8.40e-12	62.4
Msa0476330	MtrunA17_Chr3g0101131	60.526	76	30	0	85	160	396	471	2.10e-27	107
Msa0476330	MtrunA17_Chr3g0101131	38.542	96	48	2	66	161	215	299	2.07e-12	63.9
Msa0476330	MtrunA17_Chr3g0079691	58.228	79	33	0	82	160	473	551	3.14e-27	106
Msa0476330	MtrunA17_Chr3g0079691	50.000	58	28	1	104	161	280	336	2.66e-12	63.9
Msa0476330	MtrunA17_Chr8g0383351	58.667	75	30	1	87	160	142	216	3.46e-27	102
Msa0476330	MtrunA17_Chr7g0218081	55.844	77	34	0	84	160	390	466	4.92e-27	105
Msa0476330	MtrunA17_Chr7g0218081	50.877	57	27	1	104	160	228	283	8.00e-12	62.4
Msa0476330	MtrunA17_Chr3g0106491	52.174	92	43	1	69	160	331	421	1.64e-26	104
Msa0476330	MtrunA17_Chr3g0106491	47.222	72	33	2	94	161	184	254	8.94e-16	73.6
Msa0476330	MtrunA17_Chr4g0004911	55.263	76	34	0	85	160	317	392	3.38e-26	103
Msa0476330	MtrunA17_Chr4g0004911	51.724	58	28	0	104	161	184	241	3.44e-16	74.7
Msa0476330	MtrunA17_Chr5g0418191	55.263	76	34	0	85	160	301	376	5.04e-26	102
Msa0476330	MtrunA17_Chr5g0418191	50.877	57	27	1	104	160	151	206	4.48e-12	62.8
Msa0476330	MtrunA17_Chr7g0243891	55.263	76	34	0	85	160	355	430	1.57e-25	101
Msa0476330	MtrunA17_Chr7g0243891	55.172	58	25	1	104	161	216	272	1.22e-15	73.2
Msa0476330	MtrunA17_Chr5g0432161	51.190	84	41	0	77	160	394	477	2.10e-25	101
Msa0476330	MtrunA17_Chr5g0432161	53.448	58	26	1	104	161	244	300	5.38e-15	71.6
Msa0476330	MtrunA17_Chr7g0249311	52.632	76	36	0	85	160	373	448	2.76e-25	100
Msa0476330	MtrunA17_Chr7g0249311	44.048	84	39	3	81	164	163	238	1.90e-13	67.0
Msa0476330	MtrunA17_Chr7g0249301	50.649	77	38	0	84	160	272	348	5.56e-25	99.0
Msa0476330	MtrunA17_Chr7g0249301	46.250	80	35	3	81	160	46	117	2.11e-13	66.6
Msa0476330	MtrunA17_Chr4g0042831	55.714	70	31	0	91	160	265	334	7.37e-24	95.9
Msa0476330	MtrunA17_Chr4g0042831	49.123	57	29	0	104	160	145	201	1.39e-12	64.3
Msa0476330	MtrunA17_Chr5g0447701	60.000	70	28	0	91	160	239	308	1.96e-23	94.7
Msa0476330	MtrunA17_Chr7g0248721	56.410	78	33	1	84	161	121	197	3.41e-23	91.3
Msa0476330	MtrunA17_Chr4g0051181	52.000	75	35	1	88	161	227	301	7.48e-23	94.0
Msa0476330	MtrunA17_Chr7g0263531	53.623	69	32	0	92	160	349	417	1.50e-22	92.8
Msa0476330	MtrunA17_Chr7g0263531	51.786	56	26	1	105	160	190	244	2.95e-12	63.5
Msa0476330	MtrunA17_Chr1g0189391	54.167	72	32	1	90	160	83	154	2.45e-22	91.3
Msa0476330	MtrunA17_Chr7g0270831	50.000	72	35	1	91	161	203	274	5.58e-22	91.3
Msa0476330	MtrunA17_Chr3g0099641	43.529	85	47	1	77	160	224	308	7.16e-22	90.9
Msa0476330	MtrunA17_Chr2g0333851	52.703	74	32	2	91	161	154	227	2.75e-21	88.2
Msa0476330	MtrunA17_Chr4g0075201	45.455	88	47	1	75	161	238	325	3.70e-21	89.0
Msa0476330	MtrunA17_Chr7g0238921	60.000	60	24	0	104	163	124	183	3.87e-21	87.8
Msa0476330	MtrunA17_Chr2g0288871	42.000	100	57	1	63	161	264	363	8.20e-21	88.2
Msa0476330	MtrunA17_Chr7g0216891	51.389	72	34	1	91	161	206	277	8.64e-21	88.2
Msa0476330	MtrunA17_Chr1g0188941	46.575	73	39	0	88	160	35	107	1.96e-20	81.3
Msa0476330	MtrunA17_Chr4g0074001	54.286	70	32	0	91	160	346	415	2.57e-20	86.7
Msa0476330	MtrunA17_Chr5g0401821	40.678	118	63	3	44	160	145	256	2.66e-20	84.7
Msa0476330	MtrunA17_Chr4g0060271	43.750	80	44	1	82	160	233	312	1.15e-19	85.1
Msa0476330	MtrunA17_Chr6g0485431	49.296	71	35	1	91	160	141	211	2.05e-19	83.6
Msa0476330	MtrunA17_Chr4g0025051	39.252	107	57	2	63	161	287	393	1.42e-18	81.6
Msa0476330	MtrunA17_Chr2g0302391	40.659	91	53	1	71	160	178	268	1.88e-18	81.3
Msa0476330	MtrunA17_Chr2g0322391	48.000	75	38	1	87	160	332	406	2.35e-18	81.3
Msa0476330	MtrunA17_Chr1g0147881	48.718	78	36	2	84	160	245	319	2.95e-18	80.1
Msa0476330	MtrunA17_Chr1g0150281	44.737	76	39	2	88	160	122	197	5.36e-18	78.6
Msa0476330	MtrunA17_Chr4g0001361	52.459	61	28	1	102	161	160	220	6.45e-18	79.0
Msa0476330	MtrunA17_Chr4g0025061	48.611	72	36	1	91	161	347	418	8.92e-18	79.3
Msa0476330	MtrunA17_Chr8g0348311	41.111	90	50	3	74	162	127	214	1.47e-17	78.2
Msa0476330	MtrunA17_Chr3g0136961	50.847	59	28	1	103	160	137	195	1.47e-17	77.8
Msa0476330	MtrunA17_Chr4g0053281	46.154	78	38	2	84	160	249	323	2.90e-17	77.4
Msa0476330	MtrunA17_Chr4g0071521	47.436	78	37	2	84	160	228	302	1.45e-16	75.1
Msa0476330	MtrunA17_Chr1g0184691	45.946	74	39	1	88	160	277	350	2.08e-16	75.1
Msa0476330	MtrunA17_Chr7g0270051	56.897	58	24	1	105	161	54	111	2.88e-16	73.9
Msa0476330	MtrunA17_Chr5g0447711	46.377	69	37	0	92	160	218	286	4.34e-16	73.9
Msa0476330	MtrunA17_Chr2g0293481	38.614	101	57	3	66	161	225	325	1.25e-15	73.2
Msa0476330	MtrunA17_Chr7g0228941	48.438	64	32	1	101	163	49	112	1.46e-15	68.9
Msa0476330	MtrunA17_Chr3g0139021	37.624	101	58	2	61	160	275	371	3.75e-15	71.6
Msa0476330	MtrunA17_Chr1g0150271	45.000	60	32	1	102	160	99	158	4.35e-15	70.5
Msa0476330	MtrunA17_Chr7g0248691	41.758	91	51	2	74	162	123	213	6.57e-15	70.9
Msa0476330	MtrunA17_Chr8g0387501	51.667	60	28	1	103	161	128	187	8.53e-15	69.7
Msa0476330	MtrunA17_Chr8g0379461	52.632	57	26	1	105	160	77	133	4.17e-14	67.8
Msa0476330	MtrunA17_Chr4g0024391	33.645	107	63	2	63	161	181	287	6.40e-14	68.2
Msa0476330	MtrunA17_Chr2g0319961	46.269	67	35	1	95	160	71	137	1.69e-13	66.2
Msa0476330	MtrunA17_Chr3g0126391	48.333	60	28	1	103	159	132	191	4.59e-13	65.5
Msa0476330	MtrunA17_Chr2g0284321	49.123	57	28	1	105	160	36	92	6.72e-13	63.9
Msa0476330	MtrunA17_Chr5g0432071	49.123	57	28	1	104	160	104	159	1.49e-12	62.8
Msa0476330	MtrunA17_Chr1g0202461	36.957	92	51	2	70	160	233	318	2.73e-12	63.5
Msa0476330	MtrunA17_Chr5g0419241	46.667	45	24	0	87	131	60	104	2.78e-12	60.1
Msa0476330	MtrunA17_Chr2g0315381	31.532	111	69	3	56	163	100	206	9.08e-12	61.6
Msa0476330	MtrunA17_Chr2g0289181	44.444	63	34	1	99	160	9	71	1.83e-11	60.1
Msa0476330	MtrunA17_Chr2g0315361	43.939	66	34	1	97	159	141	206	2.01e-11	60.8
Msa0476330	MtrunA17_Chr7g0244981	47.458	59	28	1	104	159	122	180	3.36e-11	60.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0476330	AT5G26170.1	51.034	145	58	2	33	164	29	173	1.89e-41	137
Msa0476330	AT5G64810.1	42.515	167	81	4	1	163	14	169	8.69e-39	130
Msa0476330	AT4G18170.1	62.353	85	32	0	77	161	145	229	4.85e-32	117
Msa0476330	AT2G47260.1	63.095	84	31	0	79	162	149	232	8.91e-32	116
Msa0476330	AT5G49520.1	68.919	74	23	0	88	161	205	278	1.22e-31	117
Msa0476330	AT1G29860.1	67.568	74	24	0	88	161	120	193	3.04e-31	114
Msa0476330	AT4G39410.1	62.195	82	30	1	84	164	203	284	5.70e-31	114
Msa0476330	AT1G69310.4	65.000	80	28	0	81	160	124	203	9.53e-31	112
Msa0476330	AT1G69310.2	65.000	80	28	0	81	160	124	203	9.53e-31	112
Msa0476330	AT1G69310.1	65.000	80	28	0	81	160	124	203	9.53e-31	112
Msa0476330	AT3G62340.1	64.286	84	28	1	78	161	94	175	8.95e-30	110
Msa0476330	AT2G44745.1	48.148	108	47	1	62	160	94	201	1.96e-28	105
Msa0476330	AT1G64000.1	52.941	85	39	1	79	162	88	172	1.98e-28	104
Msa0476330	AT5G46350.1	64.789	71	25	0	91	161	170	240	2.22e-28	107
Msa0476330	AT5G13080.1	60.563	71	28	0	91	161	54	124	3.98e-28	102
Msa0476330	AT4G26640.5	60.526	76	30	0	85	160	186	261	1.07e-27	106
Msa0476330	AT4G26640.5	50.000	60	29	1	102	161	33	91	3.87e-12	63.5
Msa0476330	AT4G26640.6	60.526	76	30	0	85	160	186	261	1.07e-27	106
Msa0476330	AT4G26640.6	50.000	60	29	1	102	161	33	91	3.87e-12	63.5
Msa0476330	AT4G26640.4	60.526	76	30	0	85	160	186	261	1.07e-27	106
Msa0476330	AT4G26640.4	50.000	60	29	1	102	161	33	91	3.87e-12	63.5
Msa0476330	AT4G26640.3	60.526	76	30	0	85	160	186	261	1.07e-27	106
Msa0476330	AT4G26640.3	50.000	60	29	1	102	161	33	91	3.87e-12	63.5
Msa0476330	AT4G26640.7	60.526	76	30	0	85	160	322	397	1.27e-27	107
Msa0476330	AT4G26640.7	50.000	60	29	1	102	161	169	227	2.72e-12	63.9
Msa0476330	AT4G26640.1	60.526	76	30	0	85	160	290	365	1.45e-27	107
Msa0476330	AT4G26640.1	50.000	60	29	1	102	161	137	195	3.09e-12	63.9
Msa0476330	AT4G26640.2	60.526	76	30	0	85	160	362	437	1.73e-27	107
Msa0476330	AT4G26640.2	50.000	60	29	1	102	161	209	267	2.96e-12	63.9
Msa0476330	AT3G01970.1	60.000	70	28	0	91	160	52	121	2.13e-27	100
Msa0476330	AT2G46130.1	51.163	86	42	0	77	162	3	88	8.14e-27	97.8
Msa0476330	AT5G07100.2	56.757	74	32	0	87	160	124	197	8.63e-27	100
Msa0476330	AT5G07100.2	46.552	58	31	0	104	161	24	81	1.19e-13	66.2
Msa0476330	AT5G07100.4	56.757	74	32	0	87	160	124	197	8.63e-27	100
Msa0476330	AT5G07100.4	46.552	58	31	0	104	161	24	81	1.19e-13	66.2
Msa0476330	AT5G07100.5	56.757	74	32	0	87	160	124	197	8.63e-27	100
Msa0476330	AT5G07100.5	46.552	58	31	0	104	161	24	81	1.19e-13	66.2
Msa0476330	AT5G07100.3	56.757	74	32	0	87	160	124	197	8.63e-27	100
Msa0476330	AT5G07100.3	46.552	58	31	0	104	161	24	81	1.19e-13	66.2
Msa0476330	AT5G56270.1	56.962	79	34	0	82	160	465	543	1.04e-26	105
Msa0476330	AT5G56270.1	50.877	57	27	1	104	160	273	328	2.22e-12	64.3
Msa0476330	AT5G41570.1	53.165	79	37	0	83	161	77	155	1.87e-26	99.0
Msa0476330	AT5G07100.1	56.757	74	32	0	87	160	217	290	1.95e-26	102
Msa0476330	AT5G07100.1	46.552	58	31	0	104	161	117	174	1.88e-13	67.0
Msa0476330	AT4G04450.2	45.455	99	51	2	64	161	160	256	5.50e-26	102
Msa0476330	AT4G26440.1	54.430	79	36	0	82	160	350	428	9.27e-26	102
Msa0476330	AT4G26440.1	48.276	58	27	2	104	160	178	233	1.12e-11	62.4
Msa0476330	AT1G69310.3	61.250	80	27	1	81	160	124	199	1.23e-25	99.4
Msa0476330	AT1G13960.1	52.632	76	36	0	85	160	390	465	1.78e-25	101
Msa0476330	AT1G13960.1	54.386	57	25	1	104	160	229	284	1.27e-13	67.8
Msa0476330	AT2G38470.1	55.263	76	34	0	85	160	343	418	1.85e-25	101
Msa0476330	AT2G38470.1	50.000	58	28	1	104	161	184	240	1.15e-13	68.2
Msa0476330	AT1G13960.2	52.632	76	36	0	85	160	237	312	1.92e-25	100
Msa0476330	AT1G13960.2	54.386	57	25	1	104	160	76	131	2.21e-13	67.0
Msa0476330	AT2G21900.1	43.966	116	54	2	58	162	52	167	4.81e-25	95.9
Msa0476330	AT3G01080.2	53.947	76	35	0	85	160	325	400	3.13e-24	97.8
Msa0476330	AT3G01080.1	53.947	76	35	0	85	160	287	362	3.94e-24	97.4
Msa0476330	AT2G03340.1	51.316	76	37	0	85	160	396	471	5.16e-24	97.4
Msa0476330	AT2G03340.1	39.785	93	55	1	68	160	214	305	4.68e-13	66.2
Msa0476330	AT2G30250.1	52.632	76	36	0	85	160	309	384	1.38e-23	95.5
Msa0476330	AT4G04450.1	45.455	99	51	2	64	161	254	350	2.12e-22	93.2
Msa0476330	AT1G62300.1	50.000	76	37	1	87	161	295	370	3.10e-22	92.8
Msa0476330	AT5G15130.2	46.250	80	42	1	82	160	163	242	4.51e-22	92.0
Msa0476330	AT5G15130.1	46.250	80	42	1	82	160	205	284	5.51e-22	92.0
Msa0476330	AT1G68150.1	50.667	75	36	1	88	161	219	293	7.03e-22	90.9
Msa0476330	AT2G04880.2	55.556	72	32	0	89	160	268	339	9.15e-22	90.9
Msa0476330	AT2G04880.2	32.800	125	74	3	44	161	46	167	3.99e-12	63.5
Msa0476330	AT2G46130.2	47.674	86	41	1	77	162	3	84	9.81e-22	84.7
Msa0476330	AT2G04880.1	55.556	72	32	0	89	160	292	363	1.10e-21	90.9
Msa0476330	AT2G04880.1	32.800	125	74	3	44	161	46	167	4.41e-12	63.5
Msa0476330	AT1G55600.1	45.349	86	46	1	78	162	280	365	5.05e-21	89.0
Msa0476330	AT4G30935.1	48.276	87	40	1	74	160	306	387	1.47e-20	87.8
Msa0476330	AT2G25000.2	50.794	63	30	1	103	164	102	164	3.94e-20	84.0
Msa0476330	AT2G25000.4	50.794	63	30	1	103	164	102	164	3.94e-20	84.0
Msa0476330	AT4G31800.2	42.697	89	50	1	73	160	80	168	5.04e-20	84.0
Msa0476330	AT4G01720.1	46.667	75	39	1	88	161	223	297	7.32e-20	85.9
Msa0476330	AT1G18860.1	44.737	76	41	1	87	161	222	297	8.78e-20	85.5
Msa0476330	AT2G25000.3	50.794	63	30	1	103	164	124	186	9.14e-20	83.2
Msa0476330	AT4G31800.1	42.697	89	50	1	73	160	145	233	1.05e-19	84.0
Msa0476330	AT2G25000.1	50.794	63	30	1	103	164	145	207	1.12e-19	83.6
Msa0476330	AT4G22070.4	44.706	85	46	1	78	161	271	355	1.16e-19	85.1
Msa0476330	AT4G22070.3	44.706	85	46	1	78	161	271	355	1.16e-19	85.1
Msa0476330	AT4G22070.2	44.706	85	46	1	78	161	271	355	1.16e-19	85.1
Msa0476330	AT4G22070.1	44.706	85	46	1	78	161	271	355	1.16e-19	85.1
Msa0476330	AT5G43290.1	53.226	62	29	0	102	163	112	173	3.56e-19	82.0
Msa0476330	AT2G37260.2	56.452	62	27	0	99	160	262	323	7.02e-19	82.4
Msa0476330	AT2G37260.2	46.667	75	35	2	90	160	65	138	4.22e-12	63.2
Msa0476330	AT2G37260.3	56.452	62	27	0	99	160	264	325	7.21e-19	82.0
Msa0476330	AT2G37260.3	46.667	75	35	2	90	160	67	140	4.25e-12	63.2
Msa0476330	AT2G37260.1	56.452	62	27	0	99	160	344	405	1.17e-18	82.0
Msa0476330	AT2G37260.1	46.667	75	35	2	90	160	147	220	4.57e-12	63.2
Msa0476330	AT2G30590.1	43.434	99	54	2	67	163	275	373	1.33e-18	81.6
Msa0476330	AT3G04670.1	45.361	97	51	2	66	160	223	319	5.50e-18	79.7
Msa0476330	AT1G80840.1	43.243	74	39	2	91	161	131	204	6.13e-18	79.3
Msa0476330	AT5G28650.1	45.361	97	51	2	66	160	223	319	8.93e-18	79.0
Msa0476330	AT2G23320.1	34.307	137	69	4	39	160	167	297	1.51e-17	78.2
Msa0476330	AT4G24240.1	46.067	89	46	2	74	160	250	338	1.70e-17	78.6
Msa0476330	AT4G31550.2	46.154	78	38	2	84	160	228	302	2.21e-17	77.8
Msa0476330	AT4G31550.1	46.154	78	38	2	84	160	229	303	2.25e-17	77.8
Msa0476330	AT1G30650.1	37.705	122	68	4	48	161	154	275	7.08e-17	77.0
Msa0476330	AT2G24570.1	46.154	78	38	2	84	160	226	300	4.88e-16	74.3
Msa0476330	AT1G29280.1	53.448	58	26	1	105	161	75	132	5.98e-16	73.2
Msa0476330	AT5G52830.1	58.621	58	23	1	105	161	166	223	6.96e-16	73.9
Msa0476330	AT2G34830.1	40.385	104	54	4	66	161	170	273	9.83e-16	73.9
Msa0476330	AT2G34830.2	40.385	104	54	4	66	161	179	282	1.10e-15	73.6
Msa0476330	AT4G01250.1	35.644	101	62	2	63	162	89	187	1.21e-15	72.8
Msa0476330	AT1G69810.2	43.210	81	44	2	83	161	124	204	2.58e-15	72.4
Msa0476330	AT1G69810.1	43.210	81	44	2	83	161	182	262	3.52e-15	72.0
Msa0476330	AT3G58710.1	50.000	68	33	1	95	161	62	129	4.58e-15	70.9
Msa0476330	AT3G58710.2	50.000	68	33	1	95	161	61	128	4.72e-15	70.9
Msa0476330	AT4G23550.1	47.619	63	32	1	99	160	135	197	8.06e-14	67.8
Msa0476330	AT5G45050.1	47.297	74	32	2	95	161	1165	1238	1.69e-13	67.8
Msa0476330	AT5G45050.4	47.297	74	32	2	95	161	1026	1099	1.77e-13	67.8
Msa0476330	AT5G45050.2	47.297	74	32	2	95	161	1137	1210	1.91e-13	67.4
Msa0476330	AT1G66600.1	48.438	64	30	1	103	163	102	165	3.38e-12	62.8
Msa0476330	AT1G66560.1	49.153	59	27	1	104	159	103	161	4.52e-12	62.4
Msa0476330	AT1G66550.1	35.000	100	61	2	67	163	72	170	7.37e-12	62.0
Msa0476330	AT2G46400.1	38.542	96	54	2	69	159	67	162	8.08e-12	62.4
Msa0476330	AT5G01900.1	33.684	95	60	1	67	158	73	167	8.36e-12	62.0
Msa0476330	AT3G56400.1	36.585	82	49	1	81	159	97	178	1.95e-11	61.2
Msa0476330	AT1G66550.2	36.905	84	50	1	83	163	82	165	2.60e-11	60.5

Find 46 sgRNAs with CRISPR-Local

Find 134 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AATGAATTAGTAGGTGATTT+TGG	0.165572	3_3:-80122030	Msa0476330:CDS
TCAGGTGAATTTGGTGATAT+TGG	0.252768	3_3:+80122183	None:intergenic
CAAGTCAGAGGTTGAAATTC+TGG	0.266650	3_3:-80121530	Msa0476330:CDS
TACTAGAAGACCCCTCAATT+TGG	0.293580	3_3:+80121995	None:intergenic
TGAAATTTGATGATGATATA+TGG	0.328388	3_3:-80122116	Msa0476330:CDS
AAATCGCTGTCAGGTGAATT+TGG	0.343453	3_3:+80122174	None:intergenic
TAAATAGTGGTAGCTAGTTT+TGG	0.347526	3_3:+80121149	None:intergenic
TTTAGATGCATTTGACCTTA+AGG	0.349607	3_3:+80121126	None:intergenic
CTTGTTGAATGTCACGGTTC+AGG	0.355014	3_3:+80122055	None:intergenic
ATAGGAGGTGTCAGCAATAA+AGG	0.363243	3_3:-80121595	Msa0476330:intron
TGTAGATGTTACCTTGGATT+GGG	0.377512	3_3:+80121457	None:intergenic
TTGTTTACAGGAACTACTAT+AGG	0.382242	3_3:-80121307	Msa0476330:intron
CAGAATTTCAACCTCTGACT+TGG	0.388820	3_3:+80121531	None:intergenic
TTTCACCAACCAGTGGCCTT+TGG	0.391392	3_3:-80122154	Msa0476330:CDS
AGCTACCACTATTTACCTTA+AGG	0.400173	3_3:-80121141	Msa0476330:three_prime_UTR
GAGGTTGAAATTCTGGATGA+TGG	0.407475	3_3:-80121523	Msa0476330:CDS
AAATTCTGGATGATGGGTTC+AGG	0.414441	3_3:-80121516	Msa0476330:CDS
CAACAAGCTAATGAATTAGT+AGG	0.439335	3_3:-80122039	Msa0476330:CDS
TAGGTTGTTATTACATAACT+TGG	0.446464	3_3:+80121230	None:intergenic
AACTTGATCTAGTGAAAACT+TGG	0.453876	3_3:+80121188	None:intergenic
TTTGACCTTAAGGTAAATAG+TGG	0.462353	3_3:+80121136	None:intergenic
ATGTAGATGTTACCTTGGAT+TGG	0.470249	3_3:+80121456	None:intergenic
AATGGCTCAGTATCATCATC+TGG	0.498163	3_3:+80122093	None:intergenic
TGGATGATGGGTTCAGGTGG+AGG	0.514242	3_3:-80121510	Msa0476330:CDS
TACTATAGGTGTTCAGTGGA+TGG	0.515134	3_3:-80121293	Msa0476330:CDS
CATTAGCTTGTTGAATGTCA+CGG	0.515880	3_3:+80122049	None:intergenic
GGGTTCAGGTGGAGGAAGTA+CGG	0.526912	3_3:-80121502	Msa0476330:CDS
AGGTTGAAATTCTGGATGAT+GGG	0.535485	3_3:-80121522	Msa0476330:CDS
AGGAAGTGGAAGCCAAATTG+AGG	0.537025	3_3:-80122007	Msa0476330:CDS
GGAAGTGGAAGCCAAATTGA+GGG	0.538634	3_3:-80122006	Msa0476330:CDS
CAGCAATAAAGGTGAGAAGA+AGG	0.542475	3_3:-80121584	Msa0476330:CDS
TGGTTGGTGAAATCGCTGTC+AGG	0.551897	3_3:+80122165	None:intergenic
GAGGAAGTACGGAAAGAAGA+TGG	0.552357	3_3:-80121491	Msa0476330:CDS
AAAGAGAGTTGAGAGAGATG+TGG	0.568317	3_3:-80121258	Msa0476330:CDS
TTCTGGATGATGGGTTCAGG+TGG	0.569211	3_3:-80121513	Msa0476330:CDS
AGGACATGTTCAGAAACAAA+TGG	0.569897	3_3:+80122075	None:intergenic
CAGAGAGTTCCAAAGGCCAC+TGG	0.574642	3_3:+80122145	None:intergenic
TGCATTCAAAACCAAGTCAG+AGG	0.595589	3_3:-80121542	Msa0476330:CDS
AAGTACTCAGAGAGTTCCAA+AGG	0.612038	3_3:+80122138	None:intergenic
ATGAGTATGTGTGCCTTCGT+AGG	0.623197	3_3:+80121211	None:intergenic
GTAGATGTTACCTTGGATTG+GGG	0.647468	3_3:+80121458	None:intergenic
GAACTACTATAGGTGTTCAG+TGG	0.652914	3_3:-80121297	Msa0476330:CDS
GAGTTCCAAAGGCCACTGGT+TGG	0.656594	3_3:+80122149	None:intergenic
TATGTAATAACAACCTACGA+AGG	0.679326	3_3:-80121224	Msa0476330:CDS
GAAGTGGAAGCCAAATTGAG+GGG	0.700715	3_3:-80122005	Msa0476330:CDS
ACAGCGATTTCACCAACCAG+TGG	0.708904	3_3:-80122161	Msa0476330:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TGTCATAATTTTTTTGTTAT+TGG	+	chr3_3:80121145-80121164	None:intergenic	15.0%
!!	AGAAAGAAATTAAATTTATG+AGG	+	chr3_3:80121675-80121694	None:intergenic	15.0%
!!	AATACATAATATATAAGAGA+TGG	+	chr3_3:80122006-80122025	None:intergenic	15.0%
!!!	TGTCATAATTTTTTTGTTAT+TGG	+	chr3_3:80121145-80121164	None:intergenic	15.0%
!!	AGAAAGAAATTAAATTTATG+AGG	+	chr3_3:80121675-80121694	None:intergenic	15.0%
!!	AATACATAATATATAAGAGA+TGG	+	chr3_3:80122006-80122025	None:intergenic	15.0%
!!!	TGAAATTTGATGATGATATA+TGG	-	chr3_3:80121241-80121260	Msa0476330:CDS	20.0%
!!!	TACAATTTAATTTAGGAACT+TGG	+	chr3_3:80121393-80121412	None:intergenic	20.0%
!!	AAATTAATTCATATACACGT+CGG	-	chr3_3:80121417-80121436	Msa0476330:intron	20.0%
!!!	CATAGAAGATATTTTTTTGA+AGG	+	chr3_3:80121721-80121740	None:intergenic	20.0%
!!	AAAAATATCTTCTATGTCAT+TGG	-	chr3_3:80121725-80121744	Msa0476330:intron	20.0%
!!!	TGAAATTTGATGATGATATA+TGG	-	chr3_3:80121241-80121260	Msa0476330:CDS	20.0%
!!!	TACAATTTAATTTAGGAACT+TGG	+	chr3_3:80121393-80121412	None:intergenic	20.0%
!!	AAATTAATTCATATACACGT+CGG	-	chr3_3:80121417-80121436	Msa0476330:intron	20.0%
!!!	CATAGAAGATATTTTTTTGA+AGG	+	chr3_3:80121721-80121740	None:intergenic	20.0%
!!	AAAAATATCTTCTATGTCAT+TGG	-	chr3_3:80121725-80121744	Msa0476330:intron	20.0%
!!	AATGAATTAGTAGGTGATTT+TGG	-	chr3_3:80121327-80121346	Msa0476330:intron	25.0%
!!!	TTGGTTTGTGTCATATTTAT+AGG	-	chr3_3:80121744-80121763	Msa0476330:intron	25.0%
!!	GAATTTCCAAATTTGTTTAC+AGG	-	chr3_3:80122038-80122057	Msa0476330:CDS	25.0%
!!	TAGGTTGTTATTACATAACT+TGG	+	chr3_3:80122130-80122149	None:intergenic	25.0%
!!	AATGAATTAGTAGGTGATTT+TGG	-	chr3_3:80121327-80121346	Msa0476330:intron	25.0%
!!!	TTGGTTTGTGTCATATTTAT+AGG	-	chr3_3:80121744-80121763	Msa0476330:intron	25.0%
!!	GAATTTCCAAATTTGTTTAC+AGG	-	chr3_3:80122038-80122057	Msa0476330:CDS	25.0%
!!	TAGGTTGTTATTACATAACT+TGG	+	chr3_3:80122130-80122149	None:intergenic	25.0%
	CAACAAGCTAATGAATTAGT+AGG	-	chr3_3:80121318-80121337	Msa0476330:intron	30.0%
!!	ACACATATGATTTGTTGACA+AGG	-	chr3_3:80121519-80121538	Msa0476330:CDS	30.0%
	ACTGAGTTGCTTATAAAAAG+TGG	+	chr3_3:80121614-80121633	None:intergenic	30.0%
!	ACTTTTTATAAGCAACTCAG+TGG	-	chr3_3:80121613-80121632	Msa0476330:intron	30.0%
	GTTTGTGTCATATTTATAGG+AGG	-	chr3_3:80121747-80121766	Msa0476330:intron	30.0%
	GTAGTTCCTGTAAACAAATT+TGG	+	chr3_3:80122047-80122066	None:intergenic	30.0%
	TTGTTTACAGGAACTACTAT+AGG	-	chr3_3:80122050-80122069	Msa0476330:CDS	30.0%
	TATGTAATAACAACCTACGA+AGG	-	chr3_3:80122133-80122152	Msa0476330:CDS	30.0%
	AACTTGATCTAGTGAAAACT+TGG	+	chr3_3:80122172-80122191	None:intergenic	30.0%
!	GTTTTCACTAGATCAAGTTT+TGG	-	chr3_3:80122173-80122192	Msa0476330:CDS	30.0%
!!	TAAATAGTGGTAGCTAGTTT+TGG	+	chr3_3:80122211-80122230	None:intergenic	30.0%
	TTTGACCTTAAGGTAAATAG+TGG	+	chr3_3:80122224-80122243	None:intergenic	30.0%
	CAACAAGCTAATGAATTAGT+AGG	-	chr3_3:80121318-80121337	Msa0476330:intron	30.0%
!!	ACACATATGATTTGTTGACA+AGG	-	chr3_3:80121519-80121538	Msa0476330:CDS	30.0%
	ACTGAGTTGCTTATAAAAAG+TGG	+	chr3_3:80121614-80121633	None:intergenic	30.0%
!	ACTTTTTATAAGCAACTCAG+TGG	-	chr3_3:80121613-80121632	Msa0476330:intron	30.0%
	GTTTGTGTCATATTTATAGG+AGG	-	chr3_3:80121747-80121766	Msa0476330:intron	30.0%
	GTAGTTCCTGTAAACAAATT+TGG	+	chr3_3:80122047-80122066	None:intergenic	30.0%
	TTGTTTACAGGAACTACTAT+AGG	-	chr3_3:80122050-80122069	Msa0476330:CDS	30.0%
	TATGTAATAACAACCTACGA+AGG	-	chr3_3:80122133-80122152	Msa0476330:CDS	30.0%
	AACTTGATCTAGTGAAAACT+TGG	+	chr3_3:80122172-80122191	None:intergenic	30.0%
!	GTTTTCACTAGATCAAGTTT+TGG	-	chr3_3:80122173-80122192	Msa0476330:CDS	30.0%
!!	TAAATAGTGGTAGCTAGTTT+TGG	+	chr3_3:80122211-80122230	None:intergenic	30.0%
	TTTGACCTTAAGGTAAATAG+TGG	+	chr3_3:80122224-80122243	None:intergenic	30.0%
!	TCAGGTGAATTTGGTGATAT+TGG	+	chr3_3:80121177-80121196	None:intergenic	35.0%
	AGGACATGTTCAGAAACAAA+TGG	+	chr3_3:80121285-80121304	None:intergenic	35.0%
!!	CATTAGCTTGTTGAATGTCA+CGG	+	chr3_3:80121311-80121330	None:intergenic	35.0%
!	GAATTAGTAGGTGATTTTGG+AGG	-	chr3_3:80121330-80121349	Msa0476330:intron	35.0%
	AGGTTGAAATTCTGGATGAT+GGG	-	chr3_3:80121835-80121854	Msa0476330:intron	35.0%
	TGTAGATGTTACCTTGGATT+GGG	+	chr3_3:80121903-80121922	None:intergenic	35.0%
	ATGTAGATGTTACCTTGGAT+TGG	+	chr3_3:80121904-80121923	None:intergenic	35.0%
	TTCACATGTAGATGTTACCT+TGG	+	chr3_3:80121909-80121928	None:intergenic	35.0%
!!	TCTCAACTCTCTTTTTCACT+TGG	+	chr3_3:80122093-80122112	None:intergenic	35.0%
!!	ATCAAGTTTTGGCATCTTCA+TGG	-	chr3_3:80122184-80122203	Msa0476330:CDS	35.0%
	AGCTACCACTATTTACCTTA+AGG	-	chr3_3:80122216-80122235	Msa0476330:exon	35.0%
!	TCAGGTGAATTTGGTGATAT+TGG	+	chr3_3:80121177-80121196	None:intergenic	35.0%
	AGGACATGTTCAGAAACAAA+TGG	+	chr3_3:80121285-80121304	None:intergenic	35.0%
!!	CATTAGCTTGTTGAATGTCA+CGG	+	chr3_3:80121311-80121330	None:intergenic	35.0%
!	GAATTAGTAGGTGATTTTGG+AGG	-	chr3_3:80121330-80121349	Msa0476330:intron	35.0%
	AGGTTGAAATTCTGGATGAT+GGG	-	chr3_3:80121835-80121854	Msa0476330:intron	35.0%
	TGTAGATGTTACCTTGGATT+GGG	+	chr3_3:80121903-80121922	None:intergenic	35.0%
	ATGTAGATGTTACCTTGGAT+TGG	+	chr3_3:80121904-80121923	None:intergenic	35.0%
	TTCACATGTAGATGTTACCT+TGG	+	chr3_3:80121909-80121928	None:intergenic	35.0%
!!	TCTCAACTCTCTTTTTCACT+TGG	+	chr3_3:80122093-80122112	None:intergenic	35.0%
!!	ATCAAGTTTTGGCATCTTCA+TGG	-	chr3_3:80122184-80122203	Msa0476330:CDS	35.0%
	AGCTACCACTATTTACCTTA+AGG	-	chr3_3:80122216-80122235	Msa0476330:exon	35.0%
	AAATCGCTGTCAGGTGAATT+TGG	+	chr3_3:80121186-80121205	None:intergenic	40.0%
	AAGTACTCAGAGAGTTCCAA+AGG	+	chr3_3:80121222-80121241	None:intergenic	40.0%
	AATGGCTCAGTATCATCATC+TGG	+	chr3_3:80121267-80121286	None:intergenic	40.0%
	TACTAGAAGACCCCTCAATT+TGG	+	chr3_3:80121365-80121384	None:intergenic	40.0%
!!	ATAGGAGGTGTCAGCAATAA+AGG	-	chr3_3:80121762-80121781	Msa0476330:intron	40.0%
	CAGCAATAAAGGTGAGAAGA+AGG	-	chr3_3:80121773-80121792	Msa0476330:intron	40.0%
	TGCATTCAAAACCAAGTCAG+AGG	-	chr3_3:80121815-80121834	Msa0476330:intron	40.0%
	CAGAATTTCAACCTCTGACT+TGG	+	chr3_3:80121829-80121848	None:intergenic	40.0%
	CAAGTCAGAGGTTGAAATTC+TGG	-	chr3_3:80121827-80121846	Msa0476330:intron	40.0%
	GAGGTTGAAATTCTGGATGA+TGG	-	chr3_3:80121834-80121853	Msa0476330:intron	40.0%
!!	AAATTCTGGATGATGGGTTC+AGG	-	chr3_3:80121841-80121860	Msa0476330:intron	40.0%
	GTAGATGTTACCTTGGATTG+GGG	+	chr3_3:80121902-80121921	None:intergenic	40.0%
	GAACTACTATAGGTGTTCAG+TGG	-	chr3_3:80122060-80122079	Msa0476330:CDS	40.0%
	TACTATAGGTGTTCAGTGGA+TGG	-	chr3_3:80122064-80122083	Msa0476330:CDS	40.0%
	AAAGAGAGTTGAGAGAGATG+TGG	-	chr3_3:80122099-80122118	Msa0476330:CDS	40.0%
	AAATCGCTGTCAGGTGAATT+TGG	+	chr3_3:80121186-80121205	None:intergenic	40.0%
	AAGTACTCAGAGAGTTCCAA+AGG	+	chr3_3:80121222-80121241	None:intergenic	40.0%
	AATGGCTCAGTATCATCATC+TGG	+	chr3_3:80121267-80121286	None:intergenic	40.0%
	TACTAGAAGACCCCTCAATT+TGG	+	chr3_3:80121365-80121384	None:intergenic	40.0%
!!	ATAGGAGGTGTCAGCAATAA+AGG	-	chr3_3:80121762-80121781	Msa0476330:intron	40.0%
	CAGCAATAAAGGTGAGAAGA+AGG	-	chr3_3:80121773-80121792	Msa0476330:intron	40.0%
	TGCATTCAAAACCAAGTCAG+AGG	-	chr3_3:80121815-80121834	Msa0476330:intron	40.0%
	CAGAATTTCAACCTCTGACT+TGG	+	chr3_3:80121829-80121848	None:intergenic	40.0%
	CAAGTCAGAGGTTGAAATTC+TGG	-	chr3_3:80121827-80121846	Msa0476330:intron	40.0%
	GAGGTTGAAATTCTGGATGA+TGG	-	chr3_3:80121834-80121853	Msa0476330:intron	40.0%
!!	AAATTCTGGATGATGGGTTC+AGG	-	chr3_3:80121841-80121860	Msa0476330:intron	40.0%
	GTAGATGTTACCTTGGATTG+GGG	+	chr3_3:80121902-80121921	None:intergenic	40.0%
	GAACTACTATAGGTGTTCAG+TGG	-	chr3_3:80122060-80122079	Msa0476330:CDS	40.0%
	TACTATAGGTGTTCAGTGGA+TGG	-	chr3_3:80122064-80122083	Msa0476330:CDS	40.0%
	AAAGAGAGTTGAGAGAGATG+TGG	-	chr3_3:80122099-80122118	Msa0476330:CDS	40.0%
	CTTGTTGAATGTCACGGTTC+AGG	+	chr3_3:80121305-80121324	None:intergenic	45.0%
!!	GTAGGTGATTTTGGAGGAAG+TGG	-	chr3_3:80121336-80121355	Msa0476330:intron	45.0%
	AGGAAGTGGAAGCCAAATTG+AGG	-	chr3_3:80121350-80121369	Msa0476330:intron	45.0%
	GGAAGTGGAAGCCAAATTGA+GGG	-	chr3_3:80121351-80121370	Msa0476330:intron	45.0%
	GAAGTGGAAGCCAAATTGAG+GGG	-	chr3_3:80121352-80121371	Msa0476330:intron	45.0%
!	GAGGAAGTACGGAAAGAAGA+TGG	-	chr3_3:80121866-80121885	Msa0476330:intron	45.0%
	TGAAAAACAGCCCCAATCCA+AGG	-	chr3_3:80121889-80121908	Msa0476330:intron	45.0%
	ATGAGTATGTGTGCCTTCGT+AGG	+	chr3_3:80122149-80122168	None:intergenic	45.0%
	CTTGTTGAATGTCACGGTTC+AGG	+	chr3_3:80121305-80121324	None:intergenic	45.0%
!!	GTAGGTGATTTTGGAGGAAG+TGG	-	chr3_3:80121336-80121355	Msa0476330:intron	45.0%
	AGGAAGTGGAAGCCAAATTG+AGG	-	chr3_3:80121350-80121369	Msa0476330:intron	45.0%
	GGAAGTGGAAGCCAAATTGA+GGG	-	chr3_3:80121351-80121370	Msa0476330:intron	45.0%
	GAAGTGGAAGCCAAATTGAG+GGG	-	chr3_3:80121352-80121371	Msa0476330:intron	45.0%
!	GAGGAAGTACGGAAAGAAGA+TGG	-	chr3_3:80121866-80121885	Msa0476330:intron	45.0%
	TGAAAAACAGCCCCAATCCA+AGG	-	chr3_3:80121889-80121908	Msa0476330:intron	45.0%
	ATGAGTATGTGTGCCTTCGT+AGG	+	chr3_3:80122149-80122168	None:intergenic	45.0%
!!!	TTTAAAATACAATTTAATTT+AGG	+	chr3_3:80121400-80121419	None:intergenic	5.0%
!!!	TTTAAAATACAATTTAATTT+AGG	+	chr3_3:80121400-80121419	None:intergenic	5.0%
!!	TGGTTGGTGAAATCGCTGTC+AGG	+	chr3_3:80121195-80121214	None:intergenic	50.0%
	ACAGCGATTTCACCAACCAG+TGG	-	chr3_3:80121196-80121215	Msa0476330:CDS	50.0%
	TTTCACCAACCAGTGGCCTT+TGG	-	chr3_3:80121203-80121222	Msa0476330:CDS	50.0%
!!	TTCTGGATGATGGGTTCAGG+TGG	-	chr3_3:80121844-80121863	Msa0476330:intron	50.0%
!!	TGGTTGGTGAAATCGCTGTC+AGG	+	chr3_3:80121195-80121214	None:intergenic	50.0%
	ACAGCGATTTCACCAACCAG+TGG	-	chr3_3:80121196-80121215	Msa0476330:CDS	50.0%
	TTTCACCAACCAGTGGCCTT+TGG	-	chr3_3:80121203-80121222	Msa0476330:CDS	50.0%
!!	TTCTGGATGATGGGTTCAGG+TGG	-	chr3_3:80121844-80121863	Msa0476330:intron	50.0%
	GAGTTCCAAAGGCCACTGGT+TGG	+	chr3_3:80121211-80121230	None:intergenic	55.0%
	CAGAGAGTTCCAAAGGCCAC+TGG	+	chr3_3:80121215-80121234	None:intergenic	55.0%
!!	TGGATGATGGGTTCAGGTGG+AGG	-	chr3_3:80121847-80121866	Msa0476330:intron	55.0%
	GGGTTCAGGTGGAGGAAGTA+CGG	-	chr3_3:80121855-80121874	Msa0476330:intron	55.0%
	GAGTTCCAAAGGCCACTGGT+TGG	+	chr3_3:80121211-80121230	None:intergenic	55.0%
	CAGAGAGTTCCAAAGGCCAC+TGG	+	chr3_3:80121215-80121234	None:intergenic	55.0%
!!	TGGATGATGGGTTCAGGTGG+AGG	-	chr3_3:80121847-80121866	Msa0476330:intron	55.0%
	GGGTTCAGGTGGAGGAAGTA+CGG	-	chr3_3:80121855-80121874	Msa0476330:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_3	gene	80121129	80122250	80121129	ID=Msa0476330;Name=Msa0476330
chr3_3	mRNA	80121129	80122250	80121129	ID=Msa0476330-mRNA-1;Parent=Msa0476330;Name=Msa0476330-mRNA-1;_AED=0.05;_eAED=0.05;_QI=30\|1\|1\|1\|1\|1\|3\|67\|164
chr3_3	exon	80121129	80121319	80121129	ID=Msa0476330-mRNA-1:exon:21869;Parent=Msa0476330-mRNA-1
chr3_3	exon	80121469	80121613	80121469	ID=Msa0476330-mRNA-1:exon:21868;Parent=Msa0476330-mRNA-1
chr3_3	exon	80121995	80122250	80121995	ID=Msa0476330-mRNA-1:exon:21867;Parent=Msa0476330-mRNA-1
chr3_3	five_prime_UTR	80122221	80122250	80122221	ID=Msa0476330-mRNA-1:five_prime_utr;Parent=Msa0476330-mRNA-1
chr3_3	CDS	80121995	80122220	80121995	ID=Msa0476330-mRNA-1:cds;Parent=Msa0476330-mRNA-1
chr3_3	CDS	80121469	80121613	80121469	ID=Msa0476330-mRNA-1:cds;Parent=Msa0476330-mRNA-1
chr3_3	CDS	80121196	80121319	80121196	ID=Msa0476330-mRNA-1:cds;Parent=Msa0476330-mRNA-1
chr3_3	three_prime_UTR	80121129	80121195	80121129	ID=Msa0476330-mRNA-1:three_prime_utr;Parent=Msa0476330-mRNA-1

Gene Sequence

>Msa0476330

ATGACAGATAAAAATCCAATATCACCAAATTCACCTGACAGCGATTTCACCAACCAGTGGCCTTTGGAACTCTCTGAGTACTTGAAATTTGATGATGATATATGGCCAGATGATGATACTGAGCCATTTGTTTCTGAACATGTCCTGAACCGTGACATTCAACAAGCTAATGAATTAGTAGGTGATTTTGGAGGAAGTGGAAGCCAAATTGAGGGGTCTTCTAGTAGAGGTGTCAGCAATAAAGGTGAGAAGAAGGAAATTAGAGATCATAAAGTTGCATTCAAAACCAAGTCAGAGGTTGAAATTCTGGATGATGGGTTCAGGTGGAGGAAGTACGGAAAGAAGATGGTGAAAAACAGCCCCAATCCAAGGAACTACTATAGGTGTTCAGTGGATGGATGCCAAGTGAAAAAGAGAGTTGAGAGAGATGTGGACGATCCAAGTTATGTAATAACAACCTACGAAGGCACACATACTCATCCAAGTTTTCACTAG

Protein sequence

>Msa0476330

MTDKNPISPNSPDSDFTNQWPLELSEYLKFDDDIWPDDDTEPFVSEHVLNRDIQQANELVGDFGGSGSQIEGSSSRGVSNKGEKKEIRDHKVAFKTKSEVEILDDGFRWRKYGKKMVKNSPNPRNYYRCSVDGCQVKKRVERDVDDPSYVITTYEGTHTHPSFH*