Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0097480 | XP_003589067.2 | 85.495 | 717 | 23 | 7 | 1 | 636 | 1 | 717 | 0.0 | 1207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0097480 | sp|Q9CB03|NPGR1_ARATH | 50.141 | 708 | 265 | 11 | 1 | 635 | 1 | 693 | 0.0 | 661 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0097480 | G7ICB7 | 85.495 | 717 | 23 | 7 | 1 | 636 | 1 | 717 | 0.0 | 1207 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007970 | Msa0097480 | 0.801000 | 1.107005e-48 | -8.615850e-47 |
| Msa0018000 | Msa0097480 | 0.837193 | 6.005099e-57 | -8.615850e-47 |
| Msa0032920 | Msa0097480 | -0.801191 | 1.011437e-48 | -8.615850e-47 |
| Msa0039250 | Msa0097480 | 0.810824 | 9.512192e-51 | -8.615850e-47 |
| Msa0067810 | Msa0097480 | 0.826173 | 3.136789e-54 | -8.615850e-47 |
| Msa0081520 | Msa0097480 | 0.807173 | 5.753094e-50 | -8.615850e-47 |
| Msa0097480 | Msa0130240 | 0.805709 | 1.171203e-49 | -8.615850e-47 |
| Msa0097480 | Msa0144360 | 0.805896 | 1.069520e-49 | -8.615850e-47 |
| Msa0097480 | Msa0146030 | 0.898545 | 4.777963e-77 | -8.615850e-47 |
| Msa0097480 | Msa0173890 | 0.827281 | 1.706463e-54 | -8.615850e-47 |
| Msa0097480 | Msa0300270 | 0.803870 | 2.835588e-49 | -8.615850e-47 |
| Msa0097480 | Msa0378720 | 0.804652 | 1.948859e-49 | -8.615850e-47 |
| Msa0097480 | Msa0475790 | 0.809450 | 1.880918e-50 | -8.615850e-47 |
| Msa0097480 | Msa0620990 | 0.828284 | 9.794954e-55 | -8.615850e-47 |
| Msa0097480 | Msa0638480 | 0.802301 | 5.987625e-49 | -8.615850e-47 |
| Msa0097480 | Msa0788770 | 0.809799 | 1.582981e-50 | -8.615850e-47 |
| Msa0097480 | Msa0846140 | 0.801649 | 8.150705e-49 | -8.615850e-47 |
| Msa0097480 | Msa0856050 | 0.810293 | 1.238811e-50 | -8.615850e-47 |
| Msa0097480 | Msa0861510 | 0.812342 | 4.449081e-51 | -8.615850e-47 |
| Msa0097480 | Msa0861530 | 0.806389 | 8.421848e-50 | -8.615850e-47 |
| Msa0097480 | Msa0861600 | 0.807171 | 5.757636e-50 | -8.615850e-47 |
| Msa0097480 | Msa1252190 | 0.806129 | 9.554664e-50 | -8.615850e-47 |
| Msa0097480 | Msa1292830 | 0.809937 | 1.477826e-50 | -8.615850e-47 |
| Msa0097480 | Msa1459380 | 0.802527 | 5.377244e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0097480 | MtrunA17_Chr1g0152501 | 85.495 | 717 | 23 | 7 | 1 | 636 | 1 | 717 | 0.0 | 1207 |
| Msa0097480 | MtrunA17_Chr1g0183461 | 37.983 | 724 | 338 | 22 | 6 | 635 | 6 | 712 | 4.82e-130 | 399 |
| Msa0097480 | MtrunA17_Chr7g0261581 | 36.704 | 722 | 360 | 15 | 1 | 635 | 16 | 727 | 1.22e-125 | 388 |
| Msa0097480 | MtrunA17_Chr1g0187271 | 37.238 | 717 | 357 | 17 | 3 | 635 | 24 | 731 | 2.00e-123 | 382 |
| Msa0097480 | MtrunA17_Chr8g0369551 | 33.498 | 606 | 302 | 14 | 20 | 538 | 3 | 594 | 4.84e-88 | 286 |
| Msa0097480 | MtrunA17_Chr5g0409291 | 34.660 | 603 | 304 | 16 | 6 | 534 | 4 | 590 | 7.62e-84 | 275 |
| Msa0097480 | MtrunA17_Chr8g0369541 | 36.842 | 114 | 72 | 0 | 522 | 635 | 8 | 121 | 3.39e-21 | 89.7 |
| Msa0097480 | MtrunA17_Chr5g0409281 | 42.157 | 102 | 58 | 1 | 535 | 635 | 9 | 110 | 7.47e-19 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0097480 | AT1G27460.1 | 50.141 | 708 | 265 | 11 | 1 | 635 | 1 | 693 | 0.0 | 661 |
| Msa0097480 | AT1G27460.3 | 50.000 | 708 | 262 | 11 | 1 | 635 | 1 | 689 | 0.0 | 658 |
| Msa0097480 | AT1G27460.2 | 50.000 | 538 | 196 | 9 | 1 | 465 | 1 | 538 | 9.39e-170 | 496 |
| Msa0097480 | AT2G43040.2 | 35.277 | 703 | 344 | 15 | 24 | 635 | 18 | 700 | 3.59e-117 | 365 |
| Msa0097480 | AT2G43040.1 | 35.277 | 703 | 344 | 15 | 24 | 635 | 18 | 700 | 3.59e-117 | 365 |
| Msa0097480 | AT4G28600.1 | 35.027 | 728 | 366 | 21 | 1 | 635 | 25 | 738 | 1.65e-106 | 338 |
| Msa0097480 | AT4G28600.2 | 35.027 | 728 | 366 | 21 | 1 | 635 | 25 | 738 | 1.65e-106 | 338 |
| Msa0097480 | AT4G28600.3 | 34.747 | 731 | 369 | 22 | 1 | 635 | 25 | 743 | 6.33e-106 | 337 |
Find 140 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAGCATGATTTGGATAT+TGG | 0.161996 | 1_3:-3312428 | None:intergenic |
| TATCTTGTCTATTATGTTCT+TGG | 0.191790 | 1_3:-3313926 | None:intergenic |
| GGCATTAACGGAACGGAAAT+TGG | 0.210728 | 1_3:+3313276 | Msa0097480:intron |
| CATACAAAGAAATGAAATAT+TGG | 0.271048 | 1_3:+3308832 | Msa0097480:five_prime_UTR |
| CTTCAGCTCCTCTAAGGATT+TGG | 0.281062 | 1_3:-3310819 | None:intergenic |
| ACCTGTAATACGCCAACTTC+TGG | 0.283082 | 1_3:-3313404 | None:intergenic |
| CCCAGAAGTTGGCGTATTAC+AGG | 0.285949 | 1_3:+3313403 | Msa0097480:CDS |
| GCTTAAAGCCAAATCCTTAG+AGG | 0.300513 | 1_3:+3310811 | Msa0097480:CDS |
| ATCTGCACAGCAGAGGTTTA+AGG | 0.303216 | 1_3:+3312785 | Msa0097480:intron |
| TCTGGTCAAACCATGGAATT+TGG | 0.324195 | 1_3:+3311966 | Msa0097480:CDS |
| CTAAATGAAGCTGCTCTAAC+TGG | 0.324696 | 1_3:+3312615 | Msa0097480:CDS |
| AGCAGTAATAAATGCCAAAA+AGG | 0.325256 | 1_3:+3312944 | Msa0097480:CDS |
| AAGATGTTGTGTGCTTGTTC+TGG | 0.326511 | 1_3:+3310015 | Msa0097480:exon |
| GGAATTAAGATCTGTATAAA+TGG | 0.329348 | 1_3:-3313326 | None:intergenic |
| GATTGGGATGCTGAAATAAT+TGG | 0.335302 | 1_3:+3312168 | Msa0097480:CDS |
| TCTTTGAAATTGAACTCTTT+CGG | 0.336725 | 1_3:-3312577 | None:intergenic |
| ATCAGGAAAGATGGAACTTC+AGG | 0.337312 | 1_3:+3312140 | Msa0097480:intron |
| GTTCAAGGCCAACAAATTCT+TGG | 0.338655 | 1_3:+3312513 | Msa0097480:CDS |
| ATGCCTTCATGAGCATGATT+TGG | 0.338766 | 1_3:-3312435 | None:intergenic |
| CTGCTAGTGGGTTATCTTCA+AGG | 0.339248 | 1_3:+3310100 | Msa0097480:CDS |
| ATTGTATGGTTACCCTTGTT+TGG | 0.343692 | 1_3:+3313975 | Msa0097480:three_prime_UTR |
| GAATGCATTGACATCAAATT+AGG | 0.345332 | 1_3:-3310761 | None:intergenic |
| ATGAGCATGATTTGGATATT+GGG | 0.348898 | 1_3:-3312427 | None:intergenic |
| CAAGGTTGAACCAAGCTTCA+TGG | 0.349582 | 1_3:-3313751 | None:intergenic |
| GTATTGCTTCAGCTCCTCTA+AGG | 0.354042 | 1_3:-3310825 | None:intergenic |
| GAAGAGAAGGGTCTCTTTCA+TGG | 0.363406 | 1_3:+3308993 | Msa0097480:five_prime_UTR |
| TTGATACTTGGAATATAATC+AGG | 0.370501 | 1_3:-3313635 | None:intergenic |
| AAATTTAACTGATAATTCAT+TGG | 0.373353 | 1_3:-3314066 | None:intergenic |
| ACTGATAATTCATTGGAAAC+AGG | 0.378864 | 1_3:-3314059 | None:intergenic |
| CAGATCCTACCAGGTATCTT+TGG | 0.380041 | 1_3:+3312252 | Msa0097480:CDS |
| TAGGTCTCAATAGCTTGCTT+TGG | 0.380503 | 1_3:-3312909 | None:intergenic |
| ATTGAATCAGCTCTTCCTAA+TGG | 0.382528 | 1_3:+3311817 | Msa0097480:CDS |
| ATGAAGCTGTCACTGCTTAT+CGG | 0.382570 | 1_3:+3311938 | Msa0097480:CDS |
| AATCACTCAAACTGTTGAAC+TGG | 0.382989 | 1_3:-3313854 | None:intergenic |
| GACTGGGATGTTTGAATCAT+TGG | 0.390614 | 1_3:+3312215 | Msa0097480:CDS |
| TACCACAAGCTTTCCTCAAA+AGG | 0.405664 | 1_3:-3312344 | None:intergenic |
| TAAGGAAGCTAGAGCATTGT+TGG | 0.406121 | 1_3:+3310589 | Msa0097480:intron |
| TCCCTTGTTGCTAGGGAATC+CGG | 0.406701 | 1_3:-3310072 | None:intergenic |
| CTTTGACCCCAAGGATGATC+AGG | 0.411023 | 1_3:+3310681 | Msa0097480:CDS |
| TATCTTCAAGGACTGGAGAC+TGG | 0.411122 | 1_3:+3310112 | Msa0097480:CDS |
| ACTTAAATTCTTTGTGGTTG+AGG | 0.412197 | 1_3:+3313890 | Msa0097480:three_prime_UTR |
| ATGTTACTCATTGATGTTGT+TGG | 0.414395 | 1_3:-3312087 | None:intergenic |
| ATTAATTCTATCAGGAAAGA+TGG | 0.416682 | 1_3:+3312131 | Msa0097480:intron |
| CAATAGCCCTGATCATCCTT+GGG | 0.421432 | 1_3:-3310688 | None:intergenic |
| AGTTTGAGTGATTGAGACTT+TGG | 0.424341 | 1_3:+3313864 | Msa0097480:exon |
| TTAGCTACCACACTGCTCTA+TGG | 0.426482 | 1_3:+3312021 | Msa0097480:CDS |
| AACAAACACCAAGAATTTGT+TGG | 0.430010 | 1_3:-3312521 | None:intergenic |
| ATACCGTCCGGCATTCCATT+AGG | 0.430679 | 1_3:-3311832 | None:intergenic |
| AAGGAAGCTAGAGCATTGTT+GGG | 0.432906 | 1_3:+3310590 | Msa0097480:intron |
| TGGCGAACTTAAATTCTTTG+TGG | 0.435595 | 1_3:+3313884 | Msa0097480:three_prime_UTR |
| TTCGCAGTTGAATTGATACT+TGG | 0.437568 | 1_3:-3313647 | None:intergenic |
| AGATATAAGCAGCGACTGAT+AGG | 0.439073 | 1_3:+3313944 | Msa0097480:three_prime_UTR |
| TAATTTGATGTCAATGCATT+CGG | 0.439900 | 1_3:+3310763 | Msa0097480:CDS |
| TTTAATGAATGCTTTGCGAT+TGG | 0.441748 | 1_3:+3313718 | Msa0097480:CDS |
| CTCCTTGGCTCCAAATTCCA+TGG | 0.442330 | 1_3:-3311976 | None:intergenic |
| ATTTCATTTCTTTGTATGAA+AGG | 0.444436 | 1_3:-3308827 | None:intergenic |
| TGTAGACAGGCCAACCTCCT+TGG | 0.444748 | 1_3:-3311991 | None:intergenic |
| CACTGCTTATCGGCGTGCTC+TGG | 0.446793 | 1_3:+3311948 | Msa0097480:CDS |
| CCTTCTCATTTGCAAGTGAA+TGG | 0.448121 | 1_3:+3312063 | Msa0097480:CDS |
| TGGAACTTCAGGAAATAGAT+TGG | 0.449360 | 1_3:+3312151 | Msa0097480:CDS |
| CCTGTAATACGCCAACTTCT+GGG | 0.449510 | 1_3:-3313403 | None:intergenic |
| AATGGAAGCATGGCAAGATA+TGG | 0.451345 | 1_3:+3313300 | Msa0097480:CDS |
| GCAATAGCCCTGATCATCCT+TGG | 0.454102 | 1_3:-3310689 | None:intergenic |
| GCTCTTTGTTACAGTGCAGC+AGG | 0.459269 | 1_3:+3312300 | Msa0097480:intron |
| CATGAAGCTTGGTTCAACCT+TGG | 0.464895 | 1_3:+3313752 | Msa0097480:CDS |
| GCAAAATTGCCTCAAGAAGC+AGG | 0.465479 | 1_3:-3310790 | None:intergenic |
| AACGGAACGGAAATTGGAAA+TGG | 0.469615 | 1_3:+3313282 | Msa0097480:CDS |
| GCGAAGTTGTTGATTAAACT+TGG | 0.469791 | 1_3:+3313665 | Msa0097480:CDS |
| GTATCTTTGGTCGAGCTGAT+AGG | 0.477271 | 1_3:+3312265 | Msa0097480:CDS |
| TTTGCACCAAACAAATATGA+AGG | 0.477963 | 1_3:-3312396 | None:intergenic |
| AGAGAAATCCCTTGTTGCTA+GGG | 0.478676 | 1_3:-3310079 | None:intergenic |
| CAGAGAAATCCCTTGTTGCT+AGG | 0.478806 | 1_3:-3310080 | None:intergenic |
| AAAACAGAAAGTTGAAGAGA+AGG | 0.481124 | 1_3:+3308980 | Msa0097480:five_prime_UTR |
| AGGTAGCACAGTACCCGCTT+TGG | 0.485220 | 1_3:-3310741 | None:intergenic |
| AACCAAGCTTCATGGTTTGT+CGG | 0.489345 | 1_3:-3313743 | None:intergenic |
| ATCTTCAAGGACTGGAGACT+GGG | 0.505395 | 1_3:+3310113 | Msa0097480:CDS |
| GGAACTTCAGGAAATAGATT+GGG | 0.515192 | 1_3:+3312152 | Msa0097480:CDS |
| AGCTTGGTTCAACCTTGGAT+TGG | 0.519014 | 1_3:+3313757 | Msa0097480:CDS |
| GAGGTTGGCCTGTCTACAAA+AGG | 0.519839 | 1_3:+3311996 | Msa0097480:CDS |
| TTCGGTGAGCCTGCTTCTTG+AGG | 0.520356 | 1_3:+3310781 | Msa0097480:CDS |
| ATGAATCAGTTAACCAAACA+AGG | 0.521845 | 1_3:-3313988 | None:intergenic |
| AGCTCTTCCTAATGGAATGC+CGG | 0.522614 | 1_3:+3311825 | Msa0097480:CDS |
| AACAAATATGAAGGAAAATG+AGG | 0.527041 | 1_3:-3312387 | None:intergenic |
| CGAAGAGGCACCACAGTCAC+CGG | 0.527986 | 1_3:+3310053 | Msa0097480:CDS |
| GAGTTTGCTTTAGATGACAC+TGG | 0.530754 | 1_3:+3312825 | Msa0097480:CDS |
| AACCGACAAACCATGAAGCT+TGG | 0.536001 | 1_3:+3313741 | Msa0097480:CDS |
| GAATTTGGAGCCAAGGAGGT+TGG | 0.536228 | 1_3:+3311981 | Msa0097480:CDS |
| AATACCCTGAAGCACGTGTA+GGG | 0.536742 | 1_3:-3310648 | None:intergenic |
| ACAAGGGATTTCTCTGCTAG+TGG | 0.537197 | 1_3:+3310087 | Msa0097480:CDS |
| AACCATGGAATTTGGAGCCA+AGG | 0.539099 | 1_3:+3311974 | Msa0097480:CDS |
| AGGAAACCTCGGTCCAAAGC+GGG | 0.539136 | 1_3:+3310728 | Msa0097480:CDS |
| CAGCTTATCAAAACATAATG+AGG | 0.540674 | 1_3:+3312703 | Msa0097480:CDS |
| TTATCTATCAGAGGCTGCAA+CGG | 0.540747 | 1_3:+3311771 | Msa0097480:intron |
| CACCGGATTCCCTAGCAACA+AGG | 0.550084 | 1_3:+3310070 | Msa0097480:CDS |
| TGAAGCTCAATCATTATACA+AGG | 0.550824 | 1_3:+3313574 | Msa0097480:CDS |
| TACTGCTAACAAGGTTCTGT+AGG | 0.552206 | 1_3:-3312928 | None:intergenic |
| TATCCAAATCATGCTCATGA+AGG | 0.553335 | 1_3:+3312432 | Msa0097480:CDS |
| GGCATTTATTACTGCTAACA+AGG | 0.557549 | 1_3:-3312937 | None:intergenic |
| AAACAGAAAGTTGAAGAGAA+GGG | 0.561065 | 1_3:+3308981 | Msa0097480:five_prime_UTR |
| AGTGGGTTATCTTCAAGGAC+TGG | 0.563107 | 1_3:+3310105 | Msa0097480:CDS |
| TCACTTGCAAATGAGAAGGT+AGG | 0.565027 | 1_3:-3312059 | None:intergenic |
| AGTTTGCTTTAGATGACACT+GGG | 0.572182 | 1_3:+3312826 | Msa0097480:CDS |
| TTGGAAGTTCTACAAGAGGT+TGG | 0.572389 | 1_3:+3312742 | Msa0097480:CDS |
| CAAGGGATTTCTCTGCTAGT+GGG | 0.573642 | 1_3:+3310088 | Msa0097480:CDS |
| AAGCTAGAGCATTGTTGGGG+AGG | 0.574341 | 1_3:+3310594 | Msa0097480:CDS |
| TGTGTAGAGCAGATCCTACC+AGG | 0.574842 | 1_3:+3312243 | Msa0097480:CDS |
| GTGGAAGTGATGTTTAGCCT+TGG | 0.592412 | 1_3:+3312648 | Msa0097480:CDS |
| TTGCTGAGAGAAACAAGCTA+AGG | 0.596133 | 1_3:+3310708 | Msa0097480:CDS |
| AGGTACTCAGACATGATGGT+TGG | 0.597729 | 1_3:+3312723 | Msa0097480:CDS |
| ACAGTACCCGCTTTGGACCG+AGG | 0.599977 | 1_3:-3310734 | None:intergenic |
| CCATTCACTTGCAAATGAGA+AGG | 0.606529 | 1_3:-3312063 | None:intergenic |
| AACGGAGTGCAGAACAATTG+TGG | 0.608417 | 1_3:+3311789 | Msa0097480:CDS |
| GACTTGAAAATGCAATTCAG+AGG | 0.608528 | 1_3:+3312670 | Msa0097480:CDS |
| AATGAGGTACTCAGACATGA+TGG | 0.610964 | 1_3:+3312719 | Msa0097480:CDS |
| CTTCCTAATGGAATGCCGGA+CGG | 0.613074 | 1_3:+3311829 | Msa0097480:CDS |
| TGGAATCTGTGAAACTGTTG+CGG | 0.613740 | 1_3:+3309048 | Msa0097480:five_prime_UTR |
| GGAAATTGGAAATGGAAGCA+TGG | 0.614368 | 1_3:+3313290 | Msa0097480:CDS |
| ATGGTTGGAAGTTCTACAAG+AGG | 0.617168 | 1_3:+3312738 | Msa0097480:CDS |
| AGGAAGCTAGAGCATTGTTG+GGG | 0.619715 | 1_3:+3310591 | Msa0097480:intron |
| GGCGTGCTCTGGTCAAACCA+TGG | 0.623621 | 1_3:+3311959 | Msa0097480:CDS |
| GCTACCACACTGCTCTATGG+TGG | 0.625696 | 1_3:+3312024 | Msa0097480:CDS |
| ACCGGATTCCCTAGCAACAA+GGG | 0.628070 | 1_3:+3310071 | Msa0097480:CDS |
| ACATCAGTACTTTGACCCCA+AGG | 0.628904 | 1_3:+3310672 | Msa0097480:CDS |
| TCAGCTCGACCAAAGATACC+TGG | 0.629775 | 1_3:-3312261 | None:intergenic |
| CATGGAATTTGGAGCCAAGG+AGG | 0.631501 | 1_3:+3311977 | Msa0097480:CDS |
| TGCAGCTAGAACATCTGTAG+TGG | 0.650193 | 1_3:+3312551 | Msa0097480:intron |
| GGAGGCTTGAATATCAAAGA+GGG | 0.650810 | 1_3:+3310612 | Msa0097480:CDS |
| TGAATCAGTTAACCAAACAA+GGG | 0.656466 | 1_3:-3313987 | None:intergenic |
| TTTGACCCCAAGGATGATCA+GGG | 0.657698 | 1_3:+3310682 | Msa0097480:CDS |
| GAAACAAGCTAAGGAAACCT+CGG | 0.659340 | 1_3:+3310717 | Msa0097480:CDS |
| GGGAGGCTTGAATATCAAAG+AGG | 0.664217 | 1_3:+3310611 | Msa0097480:CDS |
| GAGGAGCTGAAGCAATACAC+TGG | 0.667577 | 1_3:+3310830 | Msa0097480:CDS |
| GCTAGGGAATCCGGTGACTG+TGG | 0.672695 | 1_3:-3310063 | None:intergenic |
| AAATTTGACAGATTAAACAC+AGG | 0.681669 | 1_3:+3314083 | Msa0097480:three_prime_UTR |
| AATAGCCCTGATCATCCTTG+GGG | 0.686368 | 1_3:-3310687 | None:intergenic |
| AGAGCAACACAAATTCGAAG+AGG | 0.702161 | 1_3:+3310038 | Msa0097480:CDS |
| AAGGAAACCTCGGTCCAAAG+CGG | 0.708975 | 1_3:+3310727 | Msa0097480:CDS |
| CTCGACCAAAGATACCTGGT+AGG | 0.732247 | 1_3:-3312257 | None:intergenic |
| TCTAACTGGAAATAATGACG+TGG | 0.743819 | 1_3:+3312629 | Msa0097480:CDS |
| AACACCACCATAGAGCAGTG+TGG | 0.767738 | 1_3:-3312028 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAATTGATTATATATAAT+TGG | + | chr1_3:3309497-3309516 | Msa0097480:intron | 10.0% |
| !!! | ATTTATTGAATACACTTTTT+TGG | + | chr1_3:3308902-3308921 | Msa0097480:five_prime_UTR | 15.0% |
| !!! | TTTATTGAATACACTTTTTT+GGG | + | chr1_3:3308903-3308922 | Msa0097480:five_prime_UTR | 15.0% |
| !!! | GAAATTTTTGTTAAAAATTC+AGG | - | chr1_3:3313235-3313254 | None:intergenic | 15.0% |
| !!! | ATTAGTGATTTGTTATTATA+TGG | - | chr1_3:3313515-3313534 | None:intergenic | 15.0% |
| !! | AAATTTAACTGATAATTCAT+TGG | - | chr1_3:3314069-3314088 | None:intergenic | 15.0% |
| !! | ATTTCATTTCTTTGTATGAA+AGG | - | chr1_3:3308830-3308849 | None:intergenic | 20.0% |
| !! | CATACAAAGAAATGAAATAT+TGG | + | chr1_3:3308832-3308851 | Msa0097480:five_prime_UTR | 20.0% |
| !!! | TGAACCACTTTTTTATAAAA+TGG | - | chr1_3:3308877-3308896 | None:intergenic | 20.0% |
| !! | AACTTTGAATTATAGGTAAA+AGG | + | chr1_3:3309403-3309422 | Msa0097480:intron | 20.0% |
| !! | ACTTTGAATTATAGGTAAAA+GGG | + | chr1_3:3309404-3309423 | Msa0097480:intron | 20.0% |
| !!! | TTTAGTTAAAATGAGTTGAA+TGG | + | chr1_3:3309521-3309540 | Msa0097480:intron | 20.0% |
| !!! | TTAGTTAAAATGAGTTGAAT+GGG | + | chr1_3:3309522-3309541 | Msa0097480:intron | 20.0% |
| !! | ATCATTTCATGAAATAAAGT+TGG | + | chr1_3:3309580-3309599 | Msa0097480:intron | 20.0% |
| !! | TCATTTCATGAAATAAAGTT+GGG | + | chr1_3:3309581-3309600 | Msa0097480:intron | 20.0% |
| !! | AATTGTAGTGATAATTGATA+CGG | + | chr1_3:3309862-3309881 | Msa0097480:intron | 20.0% |
| !! | AACAATCAAATTGTAAAATG+GGG | - | chr1_3:3309991-3310010 | None:intergenic | 20.0% |
| !! | CAACAATCAAATTGTAAAAT+GGG | - | chr1_3:3309992-3310011 | None:intergenic | 20.0% |
| !! | TCAACAATCAAATTGTAAAA+TGG | - | chr1_3:3309993-3310012 | None:intergenic | 20.0% |
| !!! | ATTTTACAATTTGATTGTTG+AGG | + | chr1_3:3309992-3310011 | Msa0097480:intron | 20.0% |
| !!! | TTCTCTGATGTTTATTTTAT+CGG | + | chr1_3:3310421-3310440 | Msa0097480:intron | 20.0% |
| !! | ACAAGATAATGATTATATGA+AGG | - | chr1_3:3310864-3310883 | None:intergenic | 20.0% |
| !!! | CTTTTGTTATTAATTCTATC+AGG | + | chr1_3:3312123-3312142 | Msa0097480:intron | 20.0% |
| !!! | ATGTAGAGGATTATTTTTAA+TGG | - | chr1_3:3313094-3313113 | None:intergenic | 20.0% |
| !! | TATTGCATATAATAATGTAG+AGG | - | chr1_3:3313108-3313127 | None:intergenic | 20.0% |
| !! | AATATGCAATTACATGATTA+TGG | + | chr1_3:3313532-3313551 | Msa0097480:intron | 20.0% |
| !! | CACTCCATTTTATAAAAAAG+TGG | + | chr1_3:3308870-3308889 | Msa0097480:five_prime_UTR | 25.0% |
| ! | TTAGAAACAGAAATGACAAA+AGG | - | chr1_3:3309142-3309161 | None:intergenic | 25.0% |
| !! | TTTTTGTGAAAAGCAATGAT+GGG | - | chr1_3:3309171-3309190 | None:intergenic | 25.0% |
| !!! | TTTTTTGTGAAAAGCAATGA+TGG | - | chr1_3:3309172-3309191 | None:intergenic | 25.0% |
| !!! | ATATTTTGATTTTCTGTTGC+AGG | + | chr1_3:3309240-3309259 | Msa0097480:intron | 25.0% |
| ! | AAAACACAAATACACAACAA+TGG | - | chr1_3:3309330-3309349 | None:intergenic | 25.0% |
| ! | GTTTGGAAATTTCAAAGTTT+CGG | + | chr1_3:3309744-3309763 | Msa0097480:intron | 25.0% |
| ! | AATTTCAAAGTTTCGGTAAA+TGG | + | chr1_3:3309751-3309770 | Msa0097480:intron | 25.0% |
| ! | ATTTCAAAGTTTCGGTAAAT+GGG | + | chr1_3:3309752-3309771 | Msa0097480:intron | 25.0% |
| ! | ATAATGTACTAAAGCAACAT+TGG | - | chr1_3:3309812-3309831 | None:intergenic | 25.0% |
| !! | CTATTAGCTTCAATTTCAAA+AGG | + | chr1_3:3309947-3309966 | Msa0097480:intron | 25.0% |
| ! | AAAATGTTGTTAGAGAGTAA+AGG | - | chr1_3:3310228-3310247 | None:intergenic | 25.0% |
| ! | ATAAATAAAGAAACGCGTTA+TGG | - | chr1_3:3310476-3310495 | None:intergenic | 25.0% |
| !!! | TTGTTTCTGCTAATATTAGT+TGG | + | chr1_3:3310500-3310519 | Msa0097480:intron | 25.0% |
| ! | TAATTTGATGTCAATGCATT+CGG | + | chr1_3:3310763-3310782 | Msa0097480:CDS | 25.0% |
| ! | AGATAATGATTATATGAAGG+TGG | - | chr1_3:3310861-3310880 | None:intergenic | 25.0% |
| ! | CAAAACAACAATGTACATTA+TGG | - | chr1_3:3310898-3310917 | None:intergenic | 25.0% |
| !!! | ATTGTTGTTTTGTTTGATTG+AGG | + | chr1_3:3310906-3310925 | Msa0097480:intron | 25.0% |
| ! | AATATGAATTGATGCTAACA+TGG | - | chr1_3:3310995-3311014 | None:intergenic | 25.0% |
| ! | AGAACAAAACTTTCAGTAAT+TGG | - | chr1_3:3311624-3311643 | None:intergenic | 25.0% |
| ! | CATAATGTAACAGCATTTAT+AGG | - | chr1_3:3311705-3311724 | None:intergenic | 25.0% |
| ! | ATTAATTCTATCAGGAAAGA+TGG | + | chr1_3:3312131-3312150 | Msa0097480:intron | 25.0% |
| ! | AACAAATATGAAGGAAAATG+AGG | - | chr1_3:3312390-3312409 | None:intergenic | 25.0% |
| !! | CATTTTCCTTCATATTTGTT+TGG | + | chr1_3:3312390-3312409 | Msa0097480:CDS | 25.0% |
| !!! | TCTTTGAAATTGAACTCTTT+CGG | - | chr1_3:3312580-3312599 | None:intergenic | 25.0% |
| ! | TTGATCAAGCAAAAATATTC+AGG | + | chr1_3:3312997-3313016 | Msa0097480:CDS | 25.0% |
| ! | TGATCAAGCAAAAATATTCA+GGG | + | chr1_3:3312998-3313017 | Msa0097480:CDS | 25.0% |
| ! | GCAATAACTTTCATTTATTG+TGG | + | chr1_3:3313122-3313141 | Msa0097480:intron | 25.0% |
| ! | GGAATTAAGATCTGTATAAA+TGG | - | chr1_3:3313329-3313348 | None:intergenic | 25.0% |
| ! | AGAGAAAAATTCTAGCAATT+GGG | - | chr1_3:3313383-3313402 | None:intergenic | 25.0% |
| ! | GTTATTATATGGTAATACCA+AGG | - | chr1_3:3313504-3313523 | None:intergenic | 25.0% |
| ! | TTGATACTTGGAATATAATC+AGG | - | chr1_3:3313638-3313657 | None:intergenic | 25.0% |
| ! | TATCTTGTCTATTATGTTCT+TGG | - | chr1_3:3313929-3313948 | None:intergenic | 25.0% |
| ! | GATAGGAAAAATTCATTGTA+TGG | + | chr1_3:3313961-3313980 | Msa0097480:three_prime_UTR | 25.0% |
| ! | AAATTTGACAGATTAAACAC+AGG | + | chr1_3:3314083-3314102 | Msa0097480:three_prime_UTR | 25.0% |
| !!! | ATTGAATACACTTTTTTGGG+TGG | + | chr1_3:3308906-3308925 | Msa0097480:five_prime_UTR | 30.0% |
| AAAACAGAAAGTTGAAGAGA+AGG | + | chr1_3:3308980-3308999 | Msa0097480:five_prime_UTR | 30.0% | |
| AAACAGAAAGTTGAAGAGAA+GGG | + | chr1_3:3308981-3309000 | Msa0097480:five_prime_UTR | 30.0% | |
| ! | TGCAAAAAAGTCCAGATTTT+TGG | + | chr1_3:3309028-3309047 | Msa0097480:five_prime_UTR | 30.0% |
| TTTCACAGATTCCAAAAATC+TGG | - | chr1_3:3309042-3309061 | None:intergenic | 30.0% | |
| GTGTAGACAAAAAGGTTAAT+GGG | - | chr1_3:3309092-3309111 | None:intergenic | 30.0% | |
| TGTATCAACACAACATTTCA+TGG | + | chr1_3:3309367-3309386 | Msa0097480:intron | 30.0% | |
| AACATTTCATGGTACAAAGT+TGG | + | chr1_3:3309378-3309397 | Msa0097480:intron | 30.0% | |
| ACATTTCATGGTACAAAGTT+GGG | + | chr1_3:3309379-3309398 | Msa0097480:intron | 30.0% | |
| GTTGGGAAACTTTGAATTAT+AGG | + | chr1_3:3309396-3309415 | Msa0097480:intron | 30.0% | |
| TTTAGTTACTTGTGTGTGTT+TGG | + | chr1_3:3309448-3309467 | Msa0097480:intron | 30.0% | |
| AATGGGAAGTGATATATGTT+TGG | + | chr1_3:3309539-3309558 | Msa0097480:intron | 30.0% | |
| !! | ATGTTACTTTAGTGTGTGTT+TGG | + | chr1_3:3309606-3309625 | Msa0097480:intron | 30.0% |
| !! | TTAAAAGTGAGTTGATTGTG+AGG | + | chr1_3:3309671-3309690 | Msa0097480:intron | 30.0% |
| CCAAACTTTATGTCATGAAA+TGG | - | chr1_3:3309730-3309749 | None:intergenic | 30.0% | |
| CCATTTCATGACATAAAGTT+TGG | + | chr1_3:3309727-3309746 | Msa0097480:intron | 30.0% | |
| TTTCAAAGTTTCGGTAAATG+GGG | + | chr1_3:3309753-3309772 | Msa0097480:intron | 30.0% | |
| TTCTACCTCATAGTTTAATG+AGG | - | chr1_3:3310196-3310215 | None:intergenic | 30.0% | |
| TGCAATTCATATTGTGTTTG+TGG | + | chr1_3:3310252-3310271 | Msa0097480:intron | 30.0% | |
| GCAATTCATATTGTGTTTGT+GGG | + | chr1_3:3310253-3310272 | Msa0097480:intron | 30.0% | |
| TCTCTCTATCACAATTCAAA+AGG | - | chr1_3:3310309-3310328 | None:intergenic | 30.0% | |
| AAACATCAGAGAAGACATTA+TGG | - | chr1_3:3310414-3310433 | None:intergenic | 30.0% | |
| !!! | TCTGATGTTTATTTTATCGG+TGG | + | chr1_3:3310424-3310443 | Msa0097480:intron | 30.0% |
| ! | GAATGCATTGACATCAAATT+AGG | - | chr1_3:3310764-3310783 | None:intergenic | 30.0% |
| CATAATGTAGTAGCATTTAC+AGG | - | chr1_3:3311026-3311045 | None:intergenic | 30.0% | |
| CAATGCAACAATGTAGATTA+TGG | - | chr1_3:3311236-3311255 | None:intergenic | 30.0% | |
| ACATTGTTGCATTGTTTGAT+TGG | + | chr1_3:3311242-3311261 | Msa0097480:intron | 30.0% | |
| CATTGTTGCATTGTTTGATT+GGG | + | chr1_3:3311243-3311262 | Msa0097480:intron | 30.0% | |
| CATAATGTAGCAGCATTTAT+AGG | - | chr1_3:3311359-3311378 | None:intergenic | 30.0% | |
| TAAAACTCAAAACACTGCAA+CGG | - | chr1_3:3311426-3311445 | None:intergenic | 30.0% | |
| ATGTGTAGACATATTGATCA+GGG | - | chr1_3:3311546-3311565 | None:intergenic | 30.0% | |
| AATGTGTAGACATATTGATC+AGG | - | chr1_3:3311547-3311566 | None:intergenic | 30.0% | |
| ATGTTACTCATTGATGTTGT+TGG | - | chr1_3:3312090-3312109 | None:intergenic | 30.0% | |
| TTTGCACCAAACAAATATGA+AGG | - | chr1_3:3312399-3312418 | None:intergenic | 30.0% | |
| ! | ATGAGCATGATTTGGATATT+GGG | - | chr1_3:3312430-3312449 | None:intergenic | 30.0% |
| !! | AAAATGCTCATTTTGATGCT+TGG | - | chr1_3:3312490-3312509 | None:intergenic | 30.0% |
| !!! | GCATCAAAATGAGCATTTTT+TGG | + | chr1_3:3312491-3312510 | Msa0097480:CDS | 30.0% |
| !!! | AATGAGCATTTTTTGGTTCA+AGG | + | chr1_3:3312498-3312517 | Msa0097480:CDS | 30.0% |
| AACAAACACCAAGAATTTGT+TGG | - | chr1_3:3312524-3312543 | None:intergenic | 30.0% | |
| !! | CAAATTCTTGGTGTTTGTTA+CGG | + | chr1_3:3312525-3312544 | Msa0097480:intron | 30.0% |
| !! | AAATTCTTGGTGTTTGTTAC+GGG | + | chr1_3:3312526-3312545 | Msa0097480:intron | 30.0% |
| CAGCTTATCAAAACATAATG+AGG | + | chr1_3:3312703-3312722 | Msa0097480:CDS | 30.0% | |
| AGCAGTAATAAATGCCAAAA+AGG | + | chr1_3:3312944-3312963 | Msa0097480:CDS | 30.0% | |
| ACTTTCATTTATTGTGGTAC+AGG | + | chr1_3:3313128-3313147 | Msa0097480:intron | 30.0% | |
| CTGCAAAATATGAAAAGCAA+GGG | - | chr1_3:3313257-3313276 | None:intergenic | 30.0% | |
| ! | TCATATTTTGCAGGCATTAA+CGG | + | chr1_3:3313264-3313283 | Msa0097480:intron | 30.0% |
| GAGAGAAAAATTCTAGCAAT+TGG | - | chr1_3:3313384-3313403 | None:intergenic | 30.0% | |
| TGAAGCTCAATCATTATACA+AGG | + | chr1_3:3313574-3313593 | Msa0097480:CDS | 30.0% | |
| ATTAAAAAGCTTCTTGCTAG+TGG | - | chr1_3:3313704-3313723 | None:intergenic | 30.0% | |
| TTTAATGAATGCTTTGCGAT+TGG | + | chr1_3:3313718-3313737 | Msa0097480:CDS | 30.0% | |
| ACTTAAATTCTTTGTGGTTG+AGG | + | chr1_3:3313890-3313909 | Msa0097480:three_prime_UTR | 30.0% | |
| TGAATCAGTTAACCAAACAA+GGG | - | chr1_3:3313990-3314009 | None:intergenic | 30.0% | |
| ATGAATCAGTTAACCAAACA+AGG | - | chr1_3:3313991-3314010 | None:intergenic | 30.0% | |
| ACTGATAATTCATTGGAAAC+AGG | - | chr1_3:3314062-3314081 | None:intergenic | 30.0% | |
| GGTGTAGACAAAAAGGTTAA+TGG | - | chr1_3:3309093-3309112 | None:intergenic | 35.0% | |
| TTTCATGTTCCCATCAATCA+TGG | + | chr1_3:3309209-3309228 | Msa0097480:intron | 35.0% | |
| TTCATGTTCCCATCAATCAT+GGG | + | chr1_3:3309210-3309229 | Msa0097480:intron | 35.0% | |
| TACCTCATAGTTTAATGAGG+CGG | - | chr1_3:3310193-3310212 | None:intergenic | 35.0% | |
| ATTCATATTGTGTTTGTGGG+TGG | + | chr1_3:3310256-3310275 | Msa0097480:intron | 35.0% | |
| GAATTGTGATAGAGAGAAGA+TGG | + | chr1_3:3310312-3310331 | Msa0097480:intron | 35.0% | |
| ! | AACTAGAGAGAATGCGTTTT+TGG | + | chr1_3:3310340-3310359 | Msa0097480:intron | 35.0% |
| GTGTAAAAGAGATGATGATC+AGG | - | chr1_3:3311208-3311227 | None:intergenic | 35.0% | |
| TTGATCAGGGTTTCAAATTG+CGG | - | chr1_3:3311533-3311552 | None:intergenic | 35.0% | |
| ! | ATTTTCCATAACCTTCGTTG+TGG | + | chr1_3:3311564-3311583 | Msa0097480:intron | 35.0% |
| ATCAAACAATACCACAACGA+AGG | - | chr1_3:3311578-3311597 | None:intergenic | 35.0% | |
| CTTGAACAAATCTCCATGTT+AGG | + | chr1_3:3311658-3311677 | Msa0097480:intron | 35.0% | |
| AACACACTTTGATCCTAACA+TGG | - | chr1_3:3311674-3311693 | None:intergenic | 35.0% | |
| ATTGAATCAGCTCTTCCTAA+TGG | + | chr1_3:3311817-3311836 | Msa0097480:CDS | 35.0% | |
| ! | AGCTAAATCCTTTTGTAGAC+AGG | - | chr1_3:3312007-3312026 | None:intergenic | 35.0% |
| TGGAACTTCAGGAAATAGAT+TGG | + | chr1_3:3312151-3312170 | Msa0097480:CDS | 35.0% | |
| GGAACTTCAGGAAATAGATT+GGG | + | chr1_3:3312152-3312171 | Msa0097480:CDS | 35.0% | |
| GATTGGGATGCTGAAATAAT+TGG | + | chr1_3:3312168-3312187 | Msa0097480:CDS | 35.0% | |
| ! | ACATTTTCGCTTTCAATGAC+TGG | + | chr1_3:3312198-3312217 | Msa0097480:CDS | 35.0% |
| ! | CATTTTCGCTTTCAATGACT+GGG | + | chr1_3:3312199-3312218 | Msa0097480:CDS | 35.0% |
| ! | CATGAGCATGATTTGGATAT+TGG | - | chr1_3:3312431-3312450 | None:intergenic | 35.0% |
| TATCCAAATCATGCTCATGA+AGG | + | chr1_3:3312432-3312451 | Msa0097480:CDS | 35.0% | |
| !! | AATTCTTGGTGTTTGTTACG+GGG | + | chr1_3:3312527-3312546 | Msa0097480:intron | 35.0% |
| TCTAACTGGAAATAATGACG+TGG | + | chr1_3:3312629-3312648 | Msa0097480:CDS | 35.0% | |
| !!! | GAATTGCATTTTCAAGTCCA+AGG | - | chr1_3:3312668-3312687 | None:intergenic | 35.0% |
| GACTTGAAAATGCAATTCAG+AGG | + | chr1_3:3312670-3312689 | Msa0097480:CDS | 35.0% | |
| ! | AGTTTGCTTTAGATGACACT+GGG | + | chr1_3:3312826-3312845 | Msa0097480:CDS | 35.0% |
| GGCATTTATTACTGCTAACA+AGG | - | chr1_3:3312940-3312959 | None:intergenic | 35.0% | |
| ! | TTGAAGCGAAATCTCCTTTT+TGG | - | chr1_3:3312961-3312980 | None:intergenic | 35.0% |
| AGCAAAAATATTCAGGGATG+AGG | + | chr1_3:3313004-3313023 | Msa0097480:CDS | 35.0% | |
| CCTGCAAAATATGAAAAGCA+AGG | - | chr1_3:3313258-3313277 | None:intergenic | 35.0% | |
| !! | CCTTGCTTTTCATATTTTGC+AGG | + | chr1_3:3313255-3313274 | Msa0097480:intron | 35.0% |
| ! | ACAAGCTTTTGCATCAAGAA+AGG | - | chr1_3:3313350-3313369 | None:intergenic | 35.0% |
| ! | AATTTTTCTCTCCCAGAAGT+TGG | + | chr1_3:3313392-3313411 | Msa0097480:CDS | 35.0% |
| TACATGATTATGGCAATGAC+AGG | + | chr1_3:3313542-3313561 | Msa0097480:intron | 35.0% | |
| ACATGATTATGGCAATGACA+GGG | + | chr1_3:3313543-3313562 | Msa0097480:intron | 35.0% | |
| TTCGCAGTTGAATTGATACT+TGG | - | chr1_3:3313650-3313669 | None:intergenic | 35.0% | |
| ! | GCGAAGTTGTTGATTAAACT+TGG | + | chr1_3:3313665-3313684 | Msa0097480:CDS | 35.0% |
| !!! | CCATTTTTGAAACCAATCCA+AGG | - | chr1_3:3313772-3313791 | None:intergenic | 35.0% |
| !! | CCTTGGATTGGTTTCAAAAA+TGG | + | chr1_3:3313769-3313788 | Msa0097480:CDS | 35.0% |
| !! | TGGATTGGTTTCAAAAATGG+AGG | + | chr1_3:3313772-3313791 | Msa0097480:CDS | 35.0% |
| !! | GGATTGGTTTCAAAAATGGA+GGG | + | chr1_3:3313773-3313792 | Msa0097480:CDS | 35.0% |
| AATCACTCAAACTGTTGAAC+TGG | - | chr1_3:3313857-3313876 | None:intergenic | 35.0% | |
| AGTTTGAGTGATTGAGACTT+TGG | + | chr1_3:3313864-3313883 | Msa0097480:exon | 35.0% | |
| TGGCGAACTTAAATTCTTTG+TGG | + | chr1_3:3313884-3313903 | Msa0097480:three_prime_UTR | 35.0% | |
| ATTGTATGGTTACCCTTGTT+TGG | + | chr1_3:3313975-3313994 | Msa0097480:three_prime_UTR | 35.0% | |
| TGGAATCTGTGAAACTGTTG+CGG | + | chr1_3:3309048-3309067 | Msa0097480:five_prime_UTR | 40.0% | |
| ACACATGGGTGTAGACAAAA+AGG | - | chr1_3:3309100-3309119 | None:intergenic | 40.0% | |
| GCAGAAGAAGAACAACACAT+GGG | - | chr1_3:3309114-3309133 | None:intergenic | 40.0% | |
| TGCAGAAGAAGAACAACACA+TGG | - | chr1_3:3309115-3309134 | None:intergenic | 40.0% | |
| TCATGTTCCCATCAATCATG+GGG | + | chr1_3:3309211-3309230 | Msa0097480:intron | 40.0% | |
| TAGCAAACCCCATGATTGAT+GGG | - | chr1_3:3309221-3309240 | None:intergenic | 40.0% | |
| ATAGCAAACCCCATGATTGA+TGG | - | chr1_3:3309222-3309241 | None:intergenic | 40.0% | |
| ! | TGCAGGAACGTGTCAATTTT+TGG | + | chr1_3:3309257-3309276 | Msa0097480:intron | 40.0% |
| ATTGTGAGGTCACTTATGTC+TGG | + | chr1_3:3309685-3309704 | Msa0097480:intron | 40.0% | |
| ! | TAAATGGGGTGTGGCATTTT+TGG | + | chr1_3:3309767-3309786 | Msa0097480:intron | 40.0% |
| ! | TTTTCTTGTGCTCCTTGTGA+AGG | + | chr1_3:3309904-3309923 | Msa0097480:intron | 40.0% |
| AAGATGTTGTGTGCTTGTTC+TGG | + | chr1_3:3310015-3310034 | Msa0097480:exon | 40.0% | |
| AGAGCAACACAAATTCGAAG+AGG | + | chr1_3:3310038-3310057 | Msa0097480:CDS | 40.0% | |
| AGAGAAATCCCTTGTTGCTA+GGG | - | chr1_3:3310082-3310101 | None:intergenic | 40.0% | |
| TGGGTGGCTGAAATTACATT+TGG | + | chr1_3:3310272-3310291 | Msa0097480:intron | 40.0% | |
| AGAAACGCGTTATGGTATGT+TGG | - | chr1_3:3310468-3310487 | None:intergenic | 40.0% | |
| !! | TAAGGAAGCTAGAGCATTGT+TGG | + | chr1_3:3310589-3310608 | Msa0097480:intron | 40.0% |
| !! | AAGGAAGCTAGAGCATTGTT+GGG | + | chr1_3:3310590-3310609 | Msa0097480:intron | 40.0% |
| GGAGGCTTGAATATCAAAGA+GGG | + | chr1_3:3310612-3310631 | Msa0097480:CDS | 40.0% | |
| TTGCTGAGAGAAACAAGCTA+AGG | + | chr1_3:3310708-3310727 | Msa0097480:CDS | 40.0% | |
| GAAACAAGCTAAGGAAACCT+CGG | + | chr1_3:3310717-3310736 | Msa0097480:CDS | 40.0% | |
| GCTTAAAGCCAAATCCTTAG+AGG | + | chr1_3:3310811-3310830 | Msa0097480:CDS | 40.0% | |
| CATGGAGATTGTTCAAGACT+TGG | - | chr1_3:3310977-3310996 | None:intergenic | 40.0% | |
| !! | TGTGTTTTTGCTGTGTGATG+TGG | + | chr1_3:3311046-3311065 | Msa0097480:intron | 40.0% |
| AATCACAGTAGAACCCACAA+AGG | - | chr1_3:3311095-3311114 | None:intergenic | 40.0% | |
| GGTCATTGCAAACTACTTTG+CGG | + | chr1_3:3311400-3311419 | Msa0097480:intron | 40.0% | |
| AAGATGCAGCTACAATGTTG+CGG | - | chr1_3:3311500-3311519 | None:intergenic | 40.0% | |
| CAATACCACAACGAAGGTTA+TGG | - | chr1_3:3311572-3311591 | None:intergenic | 40.0% | |
| ! | GCTGCTTTCTTATCTATCAG+AGG | + | chr1_3:3311762-3311781 | Msa0097480:intron | 40.0% |
| TTATCTATCAGAGGCTGCAA+CGG | + | chr1_3:3311771-3311790 | Msa0097480:intron | 40.0% | |
| TGGTGAAGAATGTAAGTTGC+AGG | + | chr1_3:3311855-3311874 | Msa0097480:intron | 40.0% | |
| GGAAATGTTCCACAAAGCAT+TGG | + | chr1_3:3311876-3311895 | Msa0097480:intron | 40.0% | |
| GCTTCCAAATCTATGGATCA+AGG | + | chr1_3:3311903-3311922 | Msa0097480:intron | 40.0% | |
| ATGAAGCTGTCACTGCTTAT+CGG | + | chr1_3:3311938-3311957 | Msa0097480:CDS | 40.0% | |
| TCTGGTCAAACCATGGAATT+TGG | + | chr1_3:3311966-3311985 | Msa0097480:CDS | 40.0% | |
| TCACTTGCAAATGAGAAGGT+AGG | - | chr1_3:3312062-3312081 | None:intergenic | 40.0% | |
| CCATTCACTTGCAAATGAGA+AGG | - | chr1_3:3312066-3312085 | None:intergenic | 40.0% | |
| CCTTCTCATTTGCAAGTGAA+TGG | + | chr1_3:3312063-3312082 | Msa0097480:CDS | 40.0% | |
| ATCAGGAAAGATGGAACTTC+AGG | + | chr1_3:3312140-3312159 | Msa0097480:intron | 40.0% | |
| GACTGGGATGTTTGAATCAT+TGG | + | chr1_3:3312215-3312234 | Msa0097480:CDS | 40.0% | |
| !! | AACCTTTTGAGGAAAGCTTG+TGG | + | chr1_3:3312342-3312361 | Msa0097480:CDS | 40.0% |
| TACCACAAGCTTTCCTCAAA+AGG | - | chr1_3:3312347-3312366 | None:intergenic | 40.0% | |
| ATGCCTTCATGAGCATGATT+TGG | - | chr1_3:3312438-3312457 | None:intergenic | 40.0% | |
| GTTCAAGGCCAACAAATTCT+TGG | + | chr1_3:3312513-3312532 | Msa0097480:CDS | 40.0% | |
| CTAAATGAAGCTGCTCTAAC+TGG | + | chr1_3:3312615-3312634 | Msa0097480:CDS | 40.0% | |
| ! | AATGAGGTACTCAGACATGA+TGG | + | chr1_3:3312719-3312738 | Msa0097480:CDS | 40.0% |
| ATGGTTGGAAGTTCTACAAG+AGG | + | chr1_3:3312738-3312757 | Msa0097480:CDS | 40.0% | |
| TTGGAAGTTCTACAAGAGGT+TGG | + | chr1_3:3312742-3312761 | Msa0097480:CDS | 40.0% | |
| ! | GAGTTTGCTTTAGATGACAC+TGG | + | chr1_3:3312825-3312844 | Msa0097480:CDS | 40.0% |
| !! | TAGGTCTCAATAGCTTGCTT+TGG | - | chr1_3:3312912-3312931 | None:intergenic | 40.0% |
| TACTGCTAACAAGGTTCTGT+AGG | - | chr1_3:3312931-3312950 | None:intergenic | 40.0% | |
| TCAGGAGCTGAATCTAAACT+AGG | - | chr1_3:3313217-3313236 | None:intergenic | 40.0% | |
| ! | TTTTGCAGGCATTAACGGAA+CGG | + | chr1_3:3313269-3313288 | Msa0097480:intron | 40.0% |
| AACGGAACGGAAATTGGAAA+TGG | + | chr1_3:3313282-3313301 | Msa0097480:CDS | 40.0% | |
| GGAAATTGGAAATGGAAGCA+TGG | + | chr1_3:3313290-3313309 | Msa0097480:CDS | 40.0% | |
| ! | AATGGAAGCATGGCAAGATA+TGG | + | chr1_3:3313300-3313319 | Msa0097480:CDS | 40.0% |
| AAGTTGGCGTATTACAGGTA+TGG | + | chr1_3:3313408-3313427 | Msa0097480:intron | 40.0% | |
| TATGGAACCTGAACACTGTT+TGG | + | chr1_3:3313426-3313445 | Msa0097480:intron | 40.0% | |
| AAGATGACCAAACAGTGTTC+AGG | - | chr1_3:3313436-3313455 | None:intergenic | 40.0% | |
| AGATGCACAGCTGAAACATT+CGG | - | chr1_3:3313475-3313494 | None:intergenic | 40.0% | |
| ! | GTTTCAGCTGTGCATCTTTT+TGG | + | chr1_3:3313478-3313497 | Msa0097480:intron | 40.0% |
| ! | AACCAAGCTTCATGGTTTGT+CGG | - | chr1_3:3313746-3313765 | None:intergenic | 40.0% |
| AGATATAAGCAGCGACTGAT+AGG | + | chr1_3:3313944-3313963 | Msa0097480:three_prime_UTR | 40.0% | |
| GAAGAGAAGGGTCTCTTTCA+TGG | + | chr1_3:3308993-3309012 | Msa0097480:five_prime_UTR | 45.0% | |
| !! | CTTGTGTGTGTTTGGTTCTG+CGG | + | chr1_3:3309456-3309475 | Msa0097480:intron | 45.0% |
| AAGTTTCGGTAAATGGGGTG+TGG | + | chr1_3:3309758-3309777 | Msa0097480:intron | 45.0% | |
| CAGAGAAATCCCTTGTTGCT+AGG | - | chr1_3:3310083-3310102 | None:intergenic | 45.0% | |
| ACAAGGGATTTCTCTGCTAG+TGG | + | chr1_3:3310087-3310106 | Msa0097480:CDS | 45.0% | |
| CAAGGGATTTCTCTGCTAGT+GGG | + | chr1_3:3310088-3310107 | Msa0097480:CDS | 45.0% | |
| !! | CTGCTAGTGGGTTATCTTCA+AGG | + | chr1_3:3310100-3310119 | Msa0097480:CDS | 45.0% |
| !! | AGTGGGTTATCTTCAAGGAC+TGG | + | chr1_3:3310105-3310124 | Msa0097480:CDS | 45.0% |
| TATCTTCAAGGACTGGAGAC+TGG | + | chr1_3:3310112-3310131 | Msa0097480:CDS | 45.0% | |
| ATCTTCAAGGACTGGAGACT+GGG | + | chr1_3:3310113-3310132 | Msa0097480:CDS | 45.0% | |
| AGCCGCCTCATTAAACTATG+AGG | + | chr1_3:3310188-3310207 | Msa0097480:intron | 45.0% | |
| !! | AGGAAGCTAGAGCATTGTTG+GGG | + | chr1_3:3310591-3310610 | Msa0097480:intron | 45.0% |
| GGGAGGCTTGAATATCAAAG+AGG | + | chr1_3:3310611-3310630 | Msa0097480:CDS | 45.0% | |
| AATACCCTGAAGCACGTGTA+GGG | - | chr1_3:3310651-3310670 | None:intergenic | 45.0% | |
| ACATCAGTACTTTGACCCCA+AGG | + | chr1_3:3310672-3310691 | Msa0097480:CDS | 45.0% | |
| TTTGACCCCAAGGATGATCA+GGG | + | chr1_3:3310682-3310701 | Msa0097480:CDS | 45.0% | |
| AATAGCCCTGATCATCCTTG+GGG | - | chr1_3:3310690-3310709 | None:intergenic | 45.0% | |
| CAATAGCCCTGATCATCCTT+GGG | - | chr1_3:3310691-3310710 | None:intergenic | 45.0% | |
| GCAAAATTGCCTCAAGAAGC+AGG | - | chr1_3:3310793-3310812 | None:intergenic | 45.0% | |
| ! | CTTCAGCTCCTCTAAGGATT+TGG | - | chr1_3:3310822-3310841 | None:intergenic | 45.0% |
| GTATTGCTTCAGCTCCTCTA+AGG | - | chr1_3:3310828-3310847 | None:intergenic | 45.0% | |
| TGCTGCAATTGCAGTGTGAT+TGG | - | chr1_3:3311119-3311138 | None:intergenic | 45.0% | |
| ATTGCAGCATGATGCAGTTG+CGG | + | chr1_3:3311130-3311149 | Msa0097480:intron | 45.0% | |
| GTGTTTCGGGAGCAATGTTA+TGG | - | chr1_3:3311162-3311181 | None:intergenic | 45.0% | |
| ! | CGTGATCTTGCTGTGTGATA+CGG | + | chr1_3:3311379-3311398 | Msa0097480:intron | 45.0% |
| TTTACAACCGCACCACATTG+CGG | + | chr1_3:3311452-3311471 | Msa0097480:intron | 45.0% | |
| AACCTCATAATGCCGCAATG+TGG | - | chr1_3:3311467-3311486 | None:intergenic | 45.0% | |
| TGTAGCTGCATCTTGTGACT+CGG | + | chr1_3:3311506-3311525 | Msa0097480:intron | 45.0% | |
| AACGGAGTGCAGAACAATTG+TGG | + | chr1_3:3311789-3311808 | Msa0097480:CDS | 45.0% | |
| AGCTCTTCCTAATGGAATGC+CGG | + | chr1_3:3311825-3311844 | Msa0097480:CDS | 45.0% | |
| CATTCTTCACCAATACCGTC+CGG | - | chr1_3:3311847-3311866 | None:intergenic | 45.0% | |
| TGGAGCTGCTTCCAAATCTA+TGG | + | chr1_3:3311896-3311915 | Msa0097480:intron | 45.0% | |
| CCTGCCTTGATCCATAGATT+TGG | - | chr1_3:3311910-3311929 | None:intergenic | 45.0% | |
| CCAAATCTATGGATCAAGGC+AGG | + | chr1_3:3311907-3311926 | Msa0097480:intron | 45.0% | |
| ! | AACCATGGAATTTGGAGCCA+AGG | + | chr1_3:3311974-3311993 | Msa0097480:CDS | 45.0% |
| TTAGCTACCACACTGCTCTA+TGG | + | chr1_3:3312021-3312040 | Msa0097480:CDS | 45.0% | |
| CAGATCCTACCAGGTATCTT+TGG | + | chr1_3:3312252-3312271 | Msa0097480:CDS | 45.0% | |
| GTATCTTTGGTCGAGCTGAT+AGG | + | chr1_3:3312265-3312284 | Msa0097480:CDS | 45.0% | |
| !! | AAGCAGCGTTGAACCTTTTG+AGG | + | chr1_3:3312331-3312350 | Msa0097480:CDS | 45.0% |
| TGCAGCTAGAACATCTGTAG+TGG | + | chr1_3:3312551-3312570 | Msa0097480:intron | 45.0% | |
| GTGGAAGTGATGTTTAGCCT+TGG | + | chr1_3:3312648-3312667 | Msa0097480:CDS | 45.0% | |
| AGGTACTCAGACATGATGGT+TGG | + | chr1_3:3312723-3312742 | Msa0097480:CDS | 45.0% | |
| !!! | GTGCGTGTTCGTTACTTTTG+AGG | + | chr1_3:3313026-3313045 | Msa0097480:intron | 45.0% |
| GGCATTAACGGAACGGAAAT+TGG | + | chr1_3:3313276-3313295 | Msa0097480:intron | 45.0% | |
| CCTGTAATACGCCAACTTCT+GGG | - | chr1_3:3313406-3313425 | None:intergenic | 45.0% | |
| ACCTGTAATACGCCAACTTC+TGG | - | chr1_3:3313407-3313426 | None:intergenic | 45.0% | |
| AACCGACAAACCATGAAGCT+TGG | + | chr1_3:3313741-3313760 | Msa0097480:CDS | 45.0% | |
| CAAGGTTGAACCAAGCTTCA+TGG | - | chr1_3:3313754-3313773 | None:intergenic | 45.0% | |
| CATGAAGCTTGGTTCAACCT+TGG | + | chr1_3:3313752-3313771 | Msa0097480:CDS | 45.0% | |
| AGCTTGGTTCAACCTTGGAT+TGG | + | chr1_3:3313757-3313776 | Msa0097480:CDS | 45.0% | |
| !!! | TATTATTATTATGAATTTTA+AGG | + | chr1_3:3310571-3310590 | Msa0097480:intron | 5.0% |
| GGTTAATGGGAACGCAGCTT+TGG | - | chr1_3:3309079-3309098 | None:intergenic | 50.0% | |
| CTTGTGCTCCTTGTGAAGGT+CGG | + | chr1_3:3309908-3309927 | Msa0097480:intron | 50.0% | |
| CCTCAATACCGACCTTCACA+AGG | - | chr1_3:3309919-3309938 | None:intergenic | 50.0% | |
| CCTTGTGAAGGTCGGTATTG+AGG | + | chr1_3:3309916-3309935 | Msa0097480:intron | 50.0% | |
| ACCGGATTCCCTAGCAACAA+GGG | + | chr1_3:3310071-3310090 | Msa0097480:CDS | 50.0% | |
| TCCCTTGTTGCTAGGGAATC+CGG | - | chr1_3:3310075-3310094 | None:intergenic | 50.0% | |
| !! | AAGCTAGAGCATTGTTGGGG+AGG | + | chr1_3:3310594-3310613 | Msa0097480:CDS | 50.0% |
| CAATACCCTGAAGCACGTGT+AGG | - | chr1_3:3310652-3310671 | None:intergenic | 50.0% | |
| CTTTGACCCCAAGGATGATC+AGG | + | chr1_3:3310681-3310700 | Msa0097480:CDS | 50.0% | |
| GCAATAGCCCTGATCATCCT+TGG | - | chr1_3:3310692-3310711 | None:intergenic | 50.0% | |
| AAGGAAACCTCGGTCCAAAG+CGG | + | chr1_3:3310727-3310746 | Msa0097480:CDS | 50.0% | |
| GAGGAGCTGAAGCAATACAC+TGG | + | chr1_3:3310830-3310849 | Msa0097480:CDS | 50.0% | |
| CACAAAGGCCGCAAAGTAGT+GGG | - | chr1_3:3311080-3311099 | None:intergenic | 50.0% | |
| CACTACTTTGCGGCCTTTGT+GGG | + | chr1_3:3311079-3311098 | Msa0097480:intron | 50.0% | |
| CAGACCACATCACGTGTTTC+GGG | - | chr1_3:3311175-3311194 | None:intergenic | 50.0% | |
| GCAGACCACATCACGTGTTT+CGG | - | chr1_3:3311176-3311195 | None:intergenic | 50.0% | |
| CATAATGCCGCAATGTGGTG+CGG | - | chr1_3:3311462-3311481 | None:intergenic | 50.0% | |
| CACCACATTGCGGCATTATG+AGG | + | chr1_3:3311462-3311481 | Msa0097480:intron | 50.0% | |
| CTTCCTAATGGAATGCCGGA+CGG | + | chr1_3:3311829-3311848 | Msa0097480:CDS | 50.0% | |
| ATACCGTCCGGCATTCCATT+AGG | - | chr1_3:3311835-3311854 | None:intergenic | 50.0% | |
| AATGGAATGCCGGACGGTAT+TGG | + | chr1_3:3311835-3311854 | Msa0097480:intron | 50.0% | |
| GAAGCAGCTCCAATGCTTTG+TGG | - | chr1_3:3311888-3311907 | None:intergenic | 50.0% | |
| CTCCTTGGCTCCAAATTCCA+TGG | - | chr1_3:3311979-3311998 | None:intergenic | 50.0% | |
| ! | CATGGAATTTGGAGCCAAGG+AGG | + | chr1_3:3311977-3311996 | Msa0097480:CDS | 50.0% |
| ! | GAATTTGGAGCCAAGGAGGT+TGG | + | chr1_3:3311981-3312000 | Msa0097480:CDS | 50.0% |
| !! | GAGGTTGGCCTGTCTACAAA+AGG | + | chr1_3:3311996-3312015 | Msa0097480:CDS | 50.0% |
| AACACCACCATAGAGCAGTG+TGG | - | chr1_3:3312031-3312050 | None:intergenic | 50.0% | |
| TGTGTAGAGCAGATCCTACC+AGG | + | chr1_3:3312243-3312262 | Msa0097480:CDS | 50.0% | |
| CTCGACCAAAGATACCTGGT+AGG | - | chr1_3:3312260-3312279 | None:intergenic | 50.0% | |
| TCAGCTCGACCAAAGATACC+TGG | - | chr1_3:3312264-3312283 | None:intergenic | 50.0% | |
| TCTTTGGTCGAGCTGATAGG+TGG | + | chr1_3:3312268-3312287 | Msa0097480:intron | 50.0% | |
| GCTCTTTGTTACAGTGCAGC+AGG | + | chr1_3:3312300-3312319 | Msa0097480:intron | 50.0% | |
| CCCAGAAGTTGGCGTATTAC+AGG | + | chr1_3:3313403-3313422 | Msa0097480:CDS | 50.0% | |
| !! | GCTGTGCATCTTTTTGGCCT+TGG | + | chr1_3:3313484-3313503 | Msa0097480:intron | 50.0% |
| CACCGGATTCCCTAGCAACA+AGG | + | chr1_3:3310070-3310089 | Msa0097480:CDS | 55.0% | |
| AGGAAACCTCGGTCCAAAGC+GGG | + | chr1_3:3310728-3310747 | Msa0097480:CDS | 55.0% | |
| AGGTAGCACAGTACCCGCTT+TGG | - | chr1_3:3310744-3310763 | None:intergenic | 55.0% | |
| TTCGGTGAGCCTGCTTCTTG+AGG | + | chr1_3:3310781-3310800 | Msa0097480:CDS | 55.0% | |
| !! | CCGCAAAGTAGTGGGTGCAA+CGG | - | chr1_3:3311072-3311091 | None:intergenic | 55.0% |
| CCGTTGCACCCACTACTTTG+CGG | + | chr1_3:3311069-3311088 | Msa0097480:intron | 55.0% | |
| CCACAAAGGCCGCAAAGTAG+TGG | - | chr1_3:3311081-3311100 | None:intergenic | 55.0% | |
| CCACTACTTTGCGGCCTTTG+TGG | + | chr1_3:3311078-3311097 | Msa0097480:intron | 55.0% | |
| TGCTCCCGAAACACGTGATG+TGG | + | chr1_3:3311168-3311187 | Msa0097480:intron | 55.0% | |
| TGTAGACAGGCCAACCTCCT+TGG | - | chr1_3:3311994-3312013 | None:intergenic | 55.0% | |
| GCTACCACACTGCTCTATGG+TGG | + | chr1_3:3312024-3312043 | Msa0097480:CDS | 55.0% | |
| !! | CGAAGAGGCACCACAGTCAC+CGG | + | chr1_3:3310053-3310072 | Msa0097480:CDS | 60.0% |
| GCTAGGGAATCCGGTGACTG+TGG | - | chr1_3:3310066-3310085 | None:intergenic | 60.0% | |
| AGCTGCCCTACACGTGCTTC+AGG | + | chr1_3:3310643-3310662 | Msa0097480:intron | 60.0% | |
| GCTGCCCTACACGTGCTTCA+GGG | + | chr1_3:3310644-3310663 | Msa0097480:intron | 60.0% | |
| ! | ACAGTACCCGCTTTGGACCG+AGG | - | chr1_3:3310737-3310756 | None:intergenic | 60.0% |
| CACTGCTTATCGGCGTGCTC+TGG | + | chr1_3:3311948-3311967 | Msa0097480:CDS | 60.0% | |
| GGCGTGCTCTGGTCAAACCA+TGG | + | chr1_3:3311959-3311978 | Msa0097480:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 3308790 | 3314125 | 3308790 | ID=Msa0097480;Name=Msa0097480 |
| chr1_3 | mRNA | 3308790 | 3314125 | 3308790 | ID=Msa0097480-mRNA-1;Parent=Msa0097480;Name=Msa0097480-mRNA-1;_AED=0.11;_eAED=0.11;_QI=284|0.27|0.25|1|0.36|0.16|12|251|636 |
| chr1_3 | exon | 3308790 | 3309069 | 3308790 | ID=Msa0097480-mRNA-1:exon:964;Parent=Msa0097480-mRNA-1 |
| chr1_3 | exon | 3310014 | 3310158 | 3310014 | ID=Msa0097480-mRNA-1:exon:965;Parent=Msa0097480-mRNA-1 |
| chr1_3 | exon | 3310593 | 3310655 | 3310593 | ID=Msa0097480-mRNA-1:exon:966;Parent=Msa0097480-mRNA-1 |
| chr1_3 | exon | 3310665 | 3310851 | 3310665 | ID=Msa0097480-mRNA-1:exon:967;Parent=Msa0097480-mRNA-1 |
| chr1_3 | exon | 3311782 | 3311850 | 3311782 | ID=Msa0097480-mRNA-1:exon:968;Parent=Msa0097480-mRNA-1 |
| chr1_3 | exon | 3311929 | 3312102 | 3311929 | ID=Msa0097480-mRNA-1:exon:969;Parent=Msa0097480-mRNA-1 |
| chr1_3 | exon | 3312145 | 3312286 | 3312145 | ID=Msa0097480-mRNA-1:exon:970;Parent=Msa0097480-mRNA-1 |
| chr1_3 | exon | 3312314 | 3312534 | 3312314 | ID=Msa0097480-mRNA-1:exon:971;Parent=Msa0097480-mRNA-1 |
| chr1_3 | exon | 3312556 | 3312782 | 3312556 | ID=Msa0097480-mRNA-1:exon:972;Parent=Msa0097480-mRNA-1 |
| chr1_3 | exon | 3312798 | 3313025 | 3312798 | ID=Msa0097480-mRNA-1:exon:973;Parent=Msa0097480-mRNA-1 |
| chr1_3 | exon | 3313277 | 3313424 | 3313277 | ID=Msa0097480-mRNA-1:exon:974;Parent=Msa0097480-mRNA-1 |
| chr1_3 | exon | 3313564 | 3314125 | 3313564 | ID=Msa0097480-mRNA-1:exon:975;Parent=Msa0097480-mRNA-1 |
| chr1_3 | five_prime_UTR | 3308790 | 3309069 | 3308790 | ID=Msa0097480-mRNA-1:five_prime_utr;Parent=Msa0097480-mRNA-1 |
| chr1_3 | five_prime_UTR | 3310014 | 3310017 | 3310014 | ID=Msa0097480-mRNA-1:five_prime_utr;Parent=Msa0097480-mRNA-1 |
| chr1_3 | CDS | 3310018 | 3310158 | 3310018 | ID=Msa0097480-mRNA-1:cds;Parent=Msa0097480-mRNA-1 |
| chr1_3 | CDS | 3310593 | 3310655 | 3310593 | ID=Msa0097480-mRNA-1:cds;Parent=Msa0097480-mRNA-1 |
| chr1_3 | CDS | 3310665 | 3310851 | 3310665 | ID=Msa0097480-mRNA-1:cds;Parent=Msa0097480-mRNA-1 |
| chr1_3 | CDS | 3311782 | 3311850 | 3311782 | ID=Msa0097480-mRNA-1:cds;Parent=Msa0097480-mRNA-1 |
| chr1_3 | CDS | 3311929 | 3312102 | 3311929 | ID=Msa0097480-mRNA-1:cds;Parent=Msa0097480-mRNA-1 |
| chr1_3 | CDS | 3312145 | 3312286 | 3312145 | ID=Msa0097480-mRNA-1:cds;Parent=Msa0097480-mRNA-1 |
| chr1_3 | CDS | 3312314 | 3312534 | 3312314 | ID=Msa0097480-mRNA-1:cds;Parent=Msa0097480-mRNA-1 |
| chr1_3 | CDS | 3312556 | 3312782 | 3312556 | ID=Msa0097480-mRNA-1:cds;Parent=Msa0097480-mRNA-1 |
| chr1_3 | CDS | 3312798 | 3313025 | 3312798 | ID=Msa0097480-mRNA-1:cds;Parent=Msa0097480-mRNA-1 |
| chr1_3 | CDS | 3313277 | 3313424 | 3313277 | ID=Msa0097480-mRNA-1:cds;Parent=Msa0097480-mRNA-1 |
| chr1_3 | CDS | 3313564 | 3313874 | 3313564 | ID=Msa0097480-mRNA-1:cds;Parent=Msa0097480-mRNA-1 |
| chr1_3 | three_prime_UTR | 3313875 | 3314125 | 3313875 | ID=Msa0097480-mRNA-1:three_prime_utr;Parent=Msa0097480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
