Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0007970 | sp|Q9XSC3|WDR44_BOVIN | 35.821 | 335 | 195 | 9 | 253 | 578 | 503 | 826 | 1.11e-53 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0007970 | A0A396JHT0 | 96.615 | 709 | 24 | 0 | 1 | 709 | 1 | 709 | 0.0 | 1410 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000880 | Msa0007970 | 0.810536 | 1.097879e-50 | -8.615850e-47 |
| Msa0002680 | Msa0007970 | 0.807271 | 5.483756e-50 | -8.615850e-47 |
| Msa0003700 | Msa0007970 | 0.800594 | 1.339492e-48 | -8.615850e-47 |
| Msa0004540 | Msa0007970 | 0.808443 | 3.090170e-50 | -8.615850e-47 |
| Msa0007970 | Msa0012940 | 0.826734 | 2.305649e-54 | -8.615850e-47 |
| Msa0007970 | Msa0014570 | 0.809092 | 2.244770e-50 | -8.615850e-47 |
| Msa0007970 | Msa0021540 | 0.816815 | 4.552995e-52 | -8.615850e-47 |
| Msa0007970 | Msa0022750 | -0.820067 | 8.341964e-53 | -8.615850e-47 |
| Msa0007970 | Msa0027820 | 0.800837 | 1.195224e-48 | -8.615850e-47 |
| Msa0007970 | Msa0031820 | 0.806110 | 9.644924e-50 | -8.615850e-47 |
| Msa0007970 | Msa0035120 | 0.829338 | 5.444712e-55 | -8.615850e-47 |
| Msa0007970 | Msa0036130 | 0.802283 | 6.037116e-49 | -8.615850e-47 |
| Msa0007970 | Msa0037160 | 0.817174 | 3.780589e-52 | -8.615850e-47 |
| Msa0007970 | Msa0039250 | 0.846902 | 1.622340e-59 | -8.615850e-47 |
| Msa0007970 | Msa0039900 | -0.812226 | 4.717170e-51 | -8.615850e-47 |
| Msa0007970 | Msa0041690 | 0.809054 | 2.287008e-50 | -8.615850e-47 |
| Msa0007970 | Msa0049790 | 0.821103 | 4.824351e-53 | -8.615850e-47 |
| Msa0007970 | Msa0054530 | 0.809149 | 2.182535e-50 | -8.615850e-47 |
| Msa0007970 | Msa0054820 | 0.806977 | 6.327601e-50 | -8.615850e-47 |
| Msa0007970 | Msa0056450 | 0.804814 | 1.803191e-49 | -8.615850e-47 |
| Msa0007970 | Msa0057610 | 0.818718 | 1.693905e-52 | -8.615850e-47 |
| Msa0007970 | Msa0061340 | 0.830247 | 3.269651e-55 | -8.615850e-47 |
| Msa0007970 | Msa0069330 | 0.808309 | 3.299642e-50 | -8.615850e-47 |
| Msa0007970 | Msa0075170 | 0.817313 | 3.517645e-52 | -8.615850e-47 |
| Msa0007970 | Msa0081360 | 0.807259 | 5.516972e-50 | -8.615850e-47 |
| Msa0007970 | Msa0081520 | 0.814973 | 1.172962e-51 | -8.615850e-47 |
| Msa0007970 | Msa0093850 | 0.823709 | 1.197155e-53 | -8.615850e-47 |
| Msa0007970 | Msa0094850 | 0.835992 | 1.214512e-56 | -8.615850e-47 |
| Msa0007970 | Msa0097480 | 0.801000 | 1.107005e-48 | -8.615850e-47 |
| Msa0007970 | Msa0097590 | 0.804204 | 2.416562e-49 | -8.615850e-47 |
| Msa0007970 | Msa0097610 | 0.805035 | 1.621285e-49 | -8.615850e-47 |
| Msa0007970 | Msa0103180 | 0.809981 | 1.446244e-50 | -8.615850e-47 |
| Msa0007970 | Msa0106620 | 0.817526 | 3.150223e-52 | -8.615850e-47 |
| Msa0007970 | Msa0108390 | 0.816110 | 6.545924e-52 | -8.615850e-47 |
| Msa0007970 | Msa0115090 | 0.844128 | 9.158603e-59 | -8.615850e-47 |
| Msa0007970 | Msa0116790 | 0.827081 | 1.905343e-54 | -8.615850e-47 |
| Msa0007970 | Msa0118000 | 0.809226 | 2.100648e-50 | -8.615850e-47 |
| Msa0007970 | Msa0118570 | 0.806888 | 6.608122e-50 | -8.615850e-47 |
| Msa0007970 | Msa0126230 | 0.808918 | 2.445958e-50 | -8.615850e-47 |
| Msa0007970 | Msa0127100 | 0.811236 | 7.745122e-51 | -8.615850e-47 |
| Msa0007970 | Msa0127850 | 0.801177 | 1.018399e-48 | -8.615850e-47 |
| Msa0007970 | Msa0130110 | 0.811446 | 6.974099e-51 | -8.615850e-47 |
| Msa0007970 | Msa0130240 | 0.836818 | 7.487007e-57 | -8.615850e-47 |
| Msa0007970 | Msa0133720 | 0.848346 | 6.499728e-60 | -8.615850e-47 |
| Msa0007970 | Msa0133820 | 0.832502 | 9.115081e-56 | -8.615850e-47 |
| Msa0007970 | Msa0134610 | 0.806223 | 9.131684e-50 | -8.615850e-47 |
| Msa0007970 | Msa0138360 | 0.833423 | 5.380578e-56 | -8.615850e-47 |
| Msa0007970 | Msa0141400 | 0.801984 | 6.957174e-49 | -8.615850e-47 |
| Msa0007970 | Msa0144360 | 0.856376 | 3.354958e-62 | -8.615850e-47 |
| Msa0007970 | Msa0146260 | 0.817100 | 3.929433e-52 | -8.615850e-47 |
| Msa0007970 | Msa0146280 | 0.816149 | 6.418157e-52 | -8.615850e-47 |
| Msa0007970 | Msa0147980 | 0.823799 | 1.139982e-53 | -8.615850e-47 |
| Msa0007970 | Msa0150570 | 0.801820 | 7.517658e-49 | -8.615850e-47 |
| Msa0007970 | Msa0152400 | 0.832376 | 9.792947e-56 | -8.615850e-47 |
| Msa0007970 | Msa0173890 | 0.835118 | 2.021642e-56 | -8.615850e-47 |
| Msa0007970 | Msa0177210 | 0.801737 | 7.816726e-49 | -8.615850e-47 |
| Msa0007970 | Msa0181230 | 0.825225 | 5.263728e-54 | -8.615850e-47 |
| Msa0007970 | Msa0188350 | 0.817857 | 2.653475e-52 | -8.615850e-47 |
| Msa0007970 | Msa0195630 | 0.802418 | 5.663975e-49 | -8.615850e-47 |
| Msa0007970 | Msa0206840 | 0.857127 | 2.016992e-62 | -8.615850e-47 |
| Msa0007970 | Msa0207350 | 0.811980 | 5.336151e-51 | -8.615850e-47 |
| Msa0007970 | Msa0212990 | 0.801354 | 9.368766e-49 | -8.615850e-47 |
| Msa0007970 | Msa0218350 | 0.806296 | 8.813719e-50 | -8.615850e-47 |
| Msa0007970 | Msa0225220 | 0.806188 | 9.286500e-50 | -8.615850e-47 |
| Msa0007970 | Msa0230150 | 0.812538 | 4.030677e-51 | -8.615850e-47 |
| Msa0007970 | Msa0230370 | 0.805263 | 1.452206e-49 | -8.615850e-47 |
| Msa0007970 | Msa0241830 | 0.830861 | 2.312980e-55 | -8.615850e-47 |
| Msa0007970 | Msa0249540 | 0.833195 | 6.132536e-56 | -8.615850e-47 |
| Msa0007970 | Msa0253290 | 0.834013 | 3.830997e-56 | -8.615850e-47 |
| Msa0007970 | Msa0263080 | 0.805296 | 1.429625e-49 | -8.615850e-47 |
| Msa0007970 | Msa0277450 | 0.820776 | 5.736172e-53 | -8.615850e-47 |
| Msa0007970 | Msa0281430 | 0.808398 | 3.159196e-50 | -8.615850e-47 |
| Msa0007970 | Msa0296250 | 0.803950 | 2.729982e-49 | -8.615850e-47 |
| Msa0007970 | Msa0300270 | 0.819920 | 9.013141e-53 | -8.615850e-47 |
| Msa0007970 | Msa0300320 | 0.832011 | 1.205906e-55 | -8.615850e-47 |
| Msa0007970 | Msa0300690 | 0.812968 | 3.246204e-51 | -8.615850e-47 |
| Msa0007970 | Msa0307850 | 0.806043 | 9.965171e-50 | -8.615850e-47 |
| Msa0007970 | Msa0320680 | 0.801601 | 8.339032e-49 | -8.615850e-47 |
| Msa0007970 | Msa0322900 | 0.846250 | 2.443941e-59 | -8.615850e-47 |
| Msa0007970 | Msa0326590 | 0.824385 | 8.304779e-54 | -8.615850e-47 |
| Msa0007970 | Msa0330340 | 0.809036 | 2.306987e-50 | -8.615850e-47 |
| Msa0007970 | Msa0333920 | 0.816147 | 6.424369e-52 | -8.615850e-47 |
| Msa0007970 | Msa0334040 | 0.825929 | 3.585023e-54 | -8.615850e-47 |
| Msa0007970 | Msa0335800 | 0.819036 | 1.433821e-52 | -8.615850e-47 |
| Msa0007970 | Msa0339500 | 0.803393 | 3.561253e-49 | -8.615850e-47 |
| Msa0007970 | Msa0341690 | 0.832874 | 7.366836e-56 | -8.615850e-47 |
| Msa0007970 | Msa0342010 | 0.830071 | 3.609173e-55 | -8.615850e-47 |
| Msa0007970 | Msa0358400 | 0.821856 | 3.232601e-53 | -8.615850e-47 |
| Msa0007970 | Msa0363060 | 0.812411 | 4.297733e-51 | -8.615850e-47 |
| Msa0007970 | Msa0363400 | 0.807262 | 5.509100e-50 | -8.615850e-47 |
| Msa0007970 | Msa0363810 | 0.820069 | 8.333658e-53 | -8.615850e-47 |
| Msa0007970 | Msa0365100 | 0.803074 | 4.147111e-49 | -8.615850e-47 |
| Msa0007970 | Msa0372810 | 0.808600 | 2.860453e-50 | -8.615850e-47 |
| Msa0007970 | Msa0378720 | 0.820936 | 5.271509e-53 | -8.615850e-47 |
| Msa0007970 | Msa0388770 | 0.813033 | 3.141152e-51 | -8.615850e-47 |
| Msa0007970 | Msa0403660 | 0.811598 | 6.463892e-51 | -8.615850e-47 |
| Msa0007970 | Msa0403850 | 0.806677 | 7.323432e-50 | -8.615850e-47 |
| Msa0007970 | Msa0405130 | 0.802167 | 6.379388e-49 | -8.615850e-47 |
| Msa0007970 | Msa0410500 | 0.803045 | 4.203293e-49 | -8.615850e-47 |
| Msa0007970 | Msa0411410 | 0.820482 | 6.702740e-53 | -8.615850e-47 |
| Msa0007970 | Msa0417880 | 0.814432 | 1.545304e-51 | -8.615850e-47 |
| Msa0007970 | Msa0428240 | 0.808382 | 3.184108e-50 | -8.615850e-47 |
| Msa0007970 | Msa0431770 | 0.804865 | 1.759776e-49 | -8.615850e-47 |
| Msa0007970 | Msa0447370 | 0.826738 | 2.300720e-54 | -8.615850e-47 |
| Msa0007970 | Msa0450400 | -0.817491 | 3.207368e-52 | -8.615850e-47 |
| Msa0007970 | Msa0455740 | 0.809450 | 1.880583e-50 | -8.615850e-47 |
| Msa0007970 | Msa0467430 | 0.825171 | 5.422714e-54 | -8.615850e-47 |
| Msa0007970 | Msa0468250 | 0.811606 | 6.435414e-51 | -8.615850e-47 |
| Msa0007970 | Msa0473330 | 0.802069 | 6.682613e-49 | -8.615850e-47 |
| Msa0007970 | Msa0473500 | 0.805598 | 1.235513e-49 | -8.615850e-47 |
| Msa0007970 | Msa0474730 | 0.809447 | 1.883724e-50 | -8.615850e-47 |
| Msa0007970 | Msa0475790 | 0.821423 | 4.070577e-53 | -8.615850e-47 |
| Msa0007970 | Msa0479200 | 0.841285 | 5.214279e-58 | -8.615850e-47 |
| Msa0007970 | Msa0481460 | 0.809311 | 2.014738e-50 | -8.615850e-47 |
| Msa0007970 | Msa0488790 | 0.807718 | 4.407400e-50 | -8.615850e-47 |
| Msa0007970 | Msa0498450 | 0.805565 | 1.255238e-49 | -8.615850e-47 |
| Msa0007970 | Msa0510290 | 0.817928 | 2.556537e-52 | -8.615850e-47 |
| Msa0007970 | Msa0513160 | 0.831003 | 2.135772e-55 | -8.615850e-47 |
| Msa0007970 | Msa0518030 | 0.833633 | 4.767733e-56 | -8.615850e-47 |
| Msa0007970 | Msa0518960 | 0.807659 | 4.536556e-50 | -8.615850e-47 |
| Msa0007970 | Msa0527150 | 0.802631 | 5.119733e-49 | -8.615850e-47 |
| Msa0007970 | Msa0527190 | 0.830764 | 2.444054e-55 | -8.615850e-47 |
| Msa0007970 | Msa0531250 | 0.833419 | 5.392271e-56 | -8.615850e-47 |
| Msa0007970 | Msa0547020 | 0.812334 | 4.466954e-51 | -8.615850e-47 |
| Msa0007970 | Msa0548150 | 0.802518 | 5.400485e-49 | -8.615850e-47 |
| Msa0007970 | Msa0556010 | 0.831021 | 2.113803e-55 | -8.615850e-47 |
| Msa0007970 | Msa0573380 | 0.840790 | 7.031117e-58 | -8.615850e-47 |
| Msa0007970 | Msa0574390 | 0.820625 | 6.212576e-53 | -8.615850e-47 |
| Msa0007970 | Msa0576680 | 0.836697 | 8.039794e-57 | -8.615850e-47 |
| Msa0007970 | Msa0580440 | 0.804255 | 2.358841e-49 | -8.615850e-47 |
| Msa0007970 | Msa0581690 | 0.818714 | 1.697255e-52 | -8.615850e-47 |
| Msa0007970 | Msa0584550 | 0.800667 | 1.294515e-48 | -8.615850e-47 |
| Msa0007970 | Msa0588090 | 0.821477 | 3.954523e-53 | -8.615850e-47 |
| Msa0007970 | Msa0597770 | 0.819397 | 1.186452e-52 | -8.615850e-47 |
| Msa0007970 | Msa0601950 | 0.828561 | 8.397121e-55 | -8.615850e-47 |
| Msa0007970 | Msa0614000 | 0.828924 | 6.857708e-55 | -8.615850e-47 |
| Msa0007970 | Msa0623330 | 0.801549 | 8.544719e-49 | -8.615850e-47 |
| Msa0007970 | Msa0626450 | 0.805344 | 1.396971e-49 | -8.615850e-47 |
| Msa0007970 | Msa0626490 | 0.803686 | 3.097331e-49 | -8.615850e-47 |
| Msa0007970 | Msa0626510 | 0.810688 | 1.017803e-50 | -8.615850e-47 |
| Msa0007970 | Msa0628420 | 0.829000 | 6.573323e-55 | -8.615850e-47 |
| Msa0007970 | Msa0628500 | 0.809239 | 2.087931e-50 | -8.615850e-47 |
| Msa0007970 | Msa0638480 | 0.822457 | 2.345182e-53 | -8.615850e-47 |
| Msa0007970 | Msa0640500 | 0.815418 | 9.339848e-52 | -8.615850e-47 |
| Msa0007970 | Msa0642880 | 0.813846 | 2.081831e-51 | -8.615850e-47 |
| Msa0007970 | Msa0664600 | 0.810387 | 1.182118e-50 | -8.615850e-47 |
| Msa0007970 | Msa0664910 | 0.807207 | 5.659091e-50 | -8.615850e-47 |
| Msa0007970 | Msa0669520 | 0.815727 | 7.969760e-52 | -8.615850e-47 |
| Msa0007970 | Msa0679100 | 0.820210 | 7.736943e-53 | -8.615850e-47 |
| Msa0007970 | Msa0689760 | 0.827369 | 1.625612e-54 | -8.615850e-47 |
| Msa0007970 | Msa0692880 | 0.814992 | 1.161685e-51 | -8.615850e-47 |
| Msa0007970 | Msa0702340 | 0.806410 | 8.336637e-50 | -8.615850e-47 |
| Msa0007970 | Msa0702590 | 0.816847 | 4.477830e-52 | -8.615850e-47 |
| Msa0007970 | Msa0702660 | 0.808934 | 2.426762e-50 | -8.615850e-47 |
| Msa0007970 | Msa0713970 | 0.806883 | 6.625601e-50 | -8.615850e-47 |
| Msa0007970 | Msa0715060 | 0.803340 | 3.653134e-49 | -8.615850e-47 |
| Msa0007970 | Msa0716410 | 0.821598 | 3.708086e-53 | -8.615850e-47 |
| Msa0007970 | Msa0716860 | 0.828573 | 8.342137e-55 | -8.615850e-47 |
| Msa0007970 | Msa0749400 | 0.838680 | 2.490892e-57 | -8.615850e-47 |
| Msa0007970 | Msa0751260 | 0.805645 | 1.208114e-49 | -8.615850e-47 |
| Msa0007970 | Msa0756530 | 0.801818 | 7.524084e-49 | -8.615850e-47 |
| Msa0007970 | Msa0757800 | 0.835316 | 1.801656e-56 | -8.615850e-47 |
| Msa0007970 | Msa0767100 | 0.815465 | 9.118010e-52 | -8.615850e-47 |
| Msa0007970 | Msa0779550 | 0.800766 | 1.235788e-48 | -8.615850e-47 |
| Msa0007970 | Msa0788770 | 0.838902 | 2.182365e-57 | -8.615850e-47 |
| Msa0007970 | Msa0799000 | 0.807807 | 4.219730e-50 | -8.615850e-47 |
| Msa0007970 | Msa0800700 | 0.834115 | 3.612006e-56 | -8.615850e-47 |
| Msa0007970 | Msa0804250 | 0.820390 | 7.036490e-53 | -8.615850e-47 |
| Msa0007970 | Msa0818630 | 0.818531 | 1.867536e-52 | -8.615850e-47 |
| Msa0007970 | Msa0823820 | 0.803944 | 2.737481e-49 | -8.615850e-47 |
| Msa0007970 | Msa0828920 | 0.800607 | 1.331198e-48 | -8.615850e-47 |
| Msa0007970 | Msa0832120 | 0.807682 | 4.487134e-50 | -8.615850e-47 |
| Msa0007970 | Msa0837410 | 0.808076 | 3.699870e-50 | -8.615850e-47 |
| Msa0007970 | Msa0856050 | 0.833992 | 3.876866e-56 | -8.615850e-47 |
| Msa0007970 | Msa0861510 | 0.842493 | 2.501179e-58 | -8.615850e-47 |
| Msa0007970 | Msa0861530 | 0.837097 | 6.354056e-57 | -8.615850e-47 |
| Msa0007970 | Msa0861600 | 0.831841 | 1.328356e-55 | -8.615850e-47 |
| Msa0007970 | Msa0888940 | 0.807401 | 5.147130e-50 | -8.615850e-47 |
| Msa0007970 | Msa0896240 | 0.806026 | 1.004456e-49 | -8.615850e-47 |
| Msa0007970 | Msa0897900 | 0.818768 | 1.649383e-52 | -8.615850e-47 |
| Msa0007970 | Msa0898660 | 0.803308 | 3.709839e-49 | -8.615850e-47 |
| Msa0007970 | Msa0930780 | 0.812903 | 3.354192e-51 | -8.615850e-47 |
| Msa0007970 | Msa0944660 | 0.824260 | 8.888413e-54 | -8.615850e-47 |
| Msa0007970 | Msa0955190 | 0.809678 | 1.680408e-50 | -8.615850e-47 |
| Msa0007970 | Msa0957100 | 0.809301 | 2.024279e-50 | -8.615850e-47 |
| Msa0007970 | Msa1004420 | 0.816225 | 6.171293e-52 | -8.615850e-47 |
| Msa0007970 | Msa1005820 | 0.802229 | 6.194202e-49 | -8.615850e-47 |
| Msa0007970 | Msa1010070 | 0.850018 | 2.226574e-60 | -8.615850e-47 |
| Msa0007970 | Msa1020630 | 0.806612 | 7.558225e-50 | -8.615850e-47 |
| Msa0007970 | Msa1027360 | 0.801878 | 7.314411e-49 | -8.615850e-47 |
| Msa0007970 | Msa1028280 | 0.825147 | 5.492481e-54 | -8.615850e-47 |
| Msa0007970 | Msa1031930 | 0.817612 | 3.012569e-52 | -8.615850e-47 |
| Msa0007970 | Msa1033660 | 0.819206 | 1.312007e-52 | -8.615850e-47 |
| Msa0007970 | Msa1034500 | 0.812397 | 4.327800e-51 | -8.615850e-47 |
| Msa0007970 | Msa1050910 | 0.853220 | 2.759424e-61 | -8.615850e-47 |
| Msa0007970 | Msa1050960 | 0.835359 | 1.756672e-56 | -8.615850e-47 |
| Msa0007970 | Msa1051600 | 0.818329 | 2.075028e-52 | -8.615850e-47 |
| Msa0007970 | Msa1051990 | 0.803952 | 2.726691e-49 | -8.615850e-47 |
| Msa0007970 | Msa1059960 | 0.821477 | 3.954523e-53 | -8.615850e-47 |
| Msa0007970 | Msa1066490 | 0.810225 | 1.281200e-50 | -8.615850e-47 |
| Msa0007970 | Msa1067140 | 0.805704 | 1.173804e-49 | -8.615850e-47 |
| Msa0007970 | Msa1071770 | 0.806945 | 6.427018e-50 | -8.615850e-47 |
| Msa0007970 | Msa1072600 | 0.810698 | 1.012882e-50 | -8.615850e-47 |
| Msa0007970 | Msa1076560 | 0.828166 | 1.045495e-54 | -8.615850e-47 |
| Msa0007970 | Msa1079230 | 0.815350 | 9.670559e-52 | -8.615850e-47 |
| Msa0007970 | Msa1084950 | 0.802568 | 5.274747e-49 | -8.615850e-47 |
| Msa0007970 | Msa1093840 | 0.809921 | 1.489873e-50 | -8.615850e-47 |
| Msa0007970 | Msa1097820 | 0.807653 | 4.550092e-50 | -8.615850e-47 |
| Msa0007970 | Msa1105160 | 0.807982 | 3.872876e-50 | -8.615850e-47 |
| Msa0007970 | Msa1113800 | 0.817602 | 3.028154e-52 | -8.615850e-47 |
| Msa0007970 | Msa1123380 | 0.810281 | 1.246417e-50 | -8.615850e-47 |
| Msa0007970 | Msa1127540 | 0.814500 | 1.492406e-51 | -8.615850e-47 |
| Msa0007970 | Msa1127590 | 0.839589 | 1.447931e-57 | -8.615850e-47 |
| Msa0007970 | Msa1145740 | 0.803382 | 3.579528e-49 | -8.615850e-47 |
| Msa0007970 | Msa1158830 | 0.808157 | 3.555660e-50 | -8.615850e-47 |
| Msa0007970 | Msa1160500 | 0.819809 | 9.555018e-53 | -8.615850e-47 |
| Msa0007970 | Msa1165740 | 0.800701 | 1.273783e-48 | -8.615850e-47 |
| Msa0007970 | Msa1168950 | 0.800852 | 1.186635e-48 | -8.615850e-47 |
| Msa0007970 | Msa1169040 | 0.806090 | 9.736743e-50 | -8.615850e-47 |
| Msa0007970 | Msa1174530 | 0.835611 | 1.517496e-56 | -8.615850e-47 |
| Msa0007970 | Msa1182770 | 0.853426 | 2.409353e-61 | -8.615850e-47 |
| Msa0007970 | Msa1199570 | 0.800575 | 1.351431e-48 | -8.615850e-47 |
| Msa0007970 | Msa1199830 | -0.803001 | 4.293761e-49 | -8.615850e-47 |
| Msa0007970 | Msa1201810 | 0.829242 | 5.744120e-55 | -8.615850e-47 |
| Msa0007970 | Msa1204830 | 0.805558 | 1.259721e-49 | -8.615850e-47 |
| Msa0007970 | Msa1208160 | 0.834240 | 3.361293e-56 | -8.615850e-47 |
| Msa0007970 | Msa1208430 | 0.817162 | 3.803920e-52 | -8.615850e-47 |
| Msa0007970 | Msa1211340 | 0.826629 | 2.442889e-54 | -8.615850e-47 |
| Msa0007970 | Msa1216260 | 0.803182 | 3.938637e-49 | -8.615850e-47 |
| Msa0007970 | Msa1224840 | 0.817258 | 3.619339e-52 | -8.615850e-47 |
| Msa0007970 | Msa1230580 | 0.812860 | 3.427742e-51 | -8.615850e-47 |
| Msa0007970 | Msa1235250 | 0.838282 | 3.154767e-57 | -8.615850e-47 |
| Msa0007970 | Msa1253450 | 0.810770 | 9.771809e-51 | -8.615850e-47 |
| Msa0007970 | Msa1253550 | 0.808089 | 3.675938e-50 | -8.615850e-47 |
| Msa0007970 | Msa1256850 | 0.800262 | 1.565499e-48 | -8.615850e-47 |
| Msa0007970 | Msa1258340 | 0.811395 | 7.154233e-51 | -8.615850e-47 |
| Msa0007970 | Msa1259640 | 0.833285 | 5.821930e-56 | -8.615850e-47 |
| Msa0007970 | Msa1265590 | 0.809460 | 1.871300e-50 | -8.615850e-47 |
| Msa0007970 | Msa1276660 | 0.838078 | 3.560671e-57 | -8.615850e-47 |
| Msa0007970 | Msa1277080 | 0.801515 | 8.682381e-49 | -8.615850e-47 |
| Msa0007970 | Msa1277490 | 0.811272 | 7.606445e-51 | -8.615850e-47 |
| Msa0007970 | Msa1282500 | 0.803510 | 3.367589e-49 | -8.615850e-47 |
| Msa0007970 | Msa1298370 | 0.834143 | 3.554953e-56 | -8.615850e-47 |
| Msa0007970 | Msa1305280 | 0.809100 | 2.236172e-50 | -8.615850e-47 |
| Msa0007970 | Msa1308140 | 0.804867 | 1.757714e-49 | -8.615850e-47 |
| Msa0007970 | Msa1328640 | 0.811516 | 6.734346e-51 | -8.615850e-47 |
| Msa0007970 | Msa1329450 | 0.808343 | 3.245749e-50 | -8.615850e-47 |
| Msa0007970 | Msa1329790 | 0.830393 | 3.012586e-55 | -8.615850e-47 |
| Msa0007970 | Msa1335690 | 0.804894 | 1.734870e-49 | -8.615850e-47 |
| Msa0007970 | Msa1338830 | 0.826374 | 2.810158e-54 | -8.615850e-47 |
| Msa0007970 | Msa1356830 | 0.813822 | 2.107162e-51 | -8.615850e-47 |
| Msa0007970 | Msa1364430 | 0.802576 | 5.254273e-49 | -8.615850e-47 |
| Msa0007970 | Msa1369150 | 0.813595 | 2.364299e-51 | -8.615850e-47 |
| Msa0007970 | Msa1371520 | 0.827890 | 1.218727e-54 | -8.615850e-47 |
| Msa0007970 | Msa1373100 | 0.800634 | 1.314460e-48 | -8.615850e-47 |
| Msa0007970 | Msa1373820 | 0.837900 | 3.955697e-57 | -8.615850e-47 |
| Msa0007970 | Msa1374040 | 0.817269 | 3.599314e-52 | -8.615850e-47 |
| Msa0007970 | Msa1374060 | 0.814601 | 1.417752e-51 | -8.615850e-47 |
| Msa0007970 | Msa1383530 | 0.811773 | 5.919352e-51 | -8.615850e-47 |
| Msa0007970 | Msa1385890 | 0.801716 | 7.897483e-49 | -8.615850e-47 |
| Msa0007970 | Msa1386710 | 0.826651 | 2.413986e-54 | -8.615850e-47 |
| Msa0007970 | Msa1409950 | 0.825782 | 3.884325e-54 | -8.615850e-47 |
| Msa0007970 | Msa1411500 | 0.806278 | 8.889472e-50 | -8.615850e-47 |
| Msa0007970 | Msa1411950 | 0.834684 | 2.598833e-56 | -8.615850e-47 |
| Msa0007970 | Msa1418260 | 0.804206 | 2.414185e-49 | -8.615850e-47 |
| Msa0007970 | Msa1420250 | 0.824574 | 7.499240e-54 | -8.615850e-47 |
| Msa0007970 | Msa1422580 | 0.801269 | 9.752040e-49 | -8.615850e-47 |
| Msa0007970 | Msa1422950 | 0.800253 | 1.572065e-48 | -8.615850e-47 |
| Msa0007970 | Msa1439610 | 0.843251 | 1.571493e-58 | -8.615850e-47 |
| Msa0007970 | Msa1440310 | 0.816325 | 5.860637e-52 | -8.615850e-47 |
| Msa0007970 | Msa1443930 | 0.835743 | 1.404851e-56 | -8.615850e-47 |
| Msa0007970 | Msa1445190 | 0.830629 | 2.636977e-55 | -8.615850e-47 |
| Msa0007970 | Msa1446810 | 0.814631 | 1.396216e-51 | -8.615850e-47 |
| Msa0007970 | Msa1466590 | 0.815600 | 8.505861e-52 | -8.615850e-47 |
| Msa0007970 | Msa1467000 | 0.811316 | 7.440618e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0007970 | MtrunA17_Chr1g0146771 | 96.615 | 709 | 24 | 0 | 1 | 709 | 1 | 709 | 0.0 | 1410 |
| Msa0007970 | MtrunA17_Chr3g0127171 | 62.397 | 726 | 228 | 14 | 1 | 707 | 1 | 700 | 0.0 | 855 |
| Msa0007970 | MtrunA17_Chr8g0388841 | 45.117 | 727 | 351 | 12 | 8 | 707 | 7 | 712 | 0.0 | 578 |
| Msa0007970 | MtrunA17_Chr8g0384061 | 36.324 | 680 | 332 | 17 | 50 | 709 | 47 | 645 | 6.48e-124 | 383 |
| Msa0007970 | MtrunA17_Chr2g0317931 | 41.493 | 576 | 260 | 17 | 196 | 709 | 298 | 858 | 8.56e-123 | 387 |
| Msa0007970 | MtrunA17_Chr3g0129821 | 44.742 | 485 | 236 | 11 | 233 | 709 | 168 | 628 | 3.59e-120 | 373 |
| Msa0007970 | MtrunA17_Chr7g0238321 | 46.917 | 373 | 187 | 6 | 234 | 595 | 394 | 766 | 1.92e-92 | 308 |
| Msa0007970 | MtrunA17_Chr1g0185501 | 27.119 | 236 | 152 | 8 | 338 | 566 | 48 | 270 | 2.28e-17 | 84.0 |
| Msa0007970 | MtrunA17_Chr4g0067151 | 26.482 | 253 | 152 | 9 | 251 | 487 | 19 | 253 | 3.05e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0007970 | AT5G24320.1 | 48.630 | 730 | 294 | 20 | 10 | 707 | 12 | 692 | 0.0 | 608 |
| Msa0007970 | AT5G24320.2 | 48.638 | 734 | 292 | 21 | 10 | 707 | 12 | 696 | 0.0 | 608 |
| Msa0007970 | AT5G53500.2 | 48.801 | 709 | 293 | 17 | 6 | 707 | 7 | 652 | 0.0 | 596 |
| Msa0007970 | AT5G53500.1 | 48.801 | 709 | 293 | 17 | 6 | 707 | 7 | 652 | 0.0 | 596 |
| Msa0007970 | AT5G42010.1 | 49.074 | 540 | 236 | 14 | 186 | 707 | 189 | 707 | 8.52e-162 | 483 |
| Msa0007970 | AT1G64610.2 | 48.381 | 525 | 224 | 12 | 191 | 707 | 160 | 645 | 5.38e-158 | 471 |
| Msa0007970 | AT1G64610.1 | 48.381 | 525 | 224 | 12 | 191 | 707 | 160 | 645 | 5.38e-158 | 471 |
| Msa0007970 | AT5G42010.2 | 52.589 | 367 | 165 | 5 | 186 | 548 | 189 | 550 | 1.81e-127 | 390 |
| Msa0007970 | AT5G54200.1 | 44.467 | 497 | 250 | 11 | 232 | 709 | 336 | 825 | 2.84e-124 | 390 |
| Msa0007970 | AT3G15470.1 | 39.724 | 579 | 291 | 11 | 178 | 709 | 316 | 883 | 5.32e-120 | 380 |
| Msa0007970 | AT1G48870.2 | 39.666 | 479 | 228 | 12 | 231 | 706 | 170 | 590 | 2.36e-98 | 315 |
| Msa0007970 | AT1G48870.3 | 39.666 | 479 | 228 | 12 | 231 | 706 | 170 | 590 | 2.36e-98 | 315 |
| Msa0007970 | AT1G48870.1 | 39.666 | 479 | 228 | 12 | 231 | 706 | 170 | 590 | 2.36e-98 | 315 |
| Msa0007970 | AT5G02430.1 | 39.768 | 518 | 263 | 11 | 232 | 706 | 384 | 895 | 1.89e-96 | 318 |
| Msa0007970 | AT2G37670.2 | 39.539 | 521 | 261 | 12 | 234 | 706 | 380 | 894 | 7.54e-93 | 308 |
| Msa0007970 | AT2G37670.1 | 39.539 | 521 | 261 | 12 | 234 | 706 | 379 | 893 | 8.73e-93 | 308 |
| Msa0007970 | AT3G49660.1 | 24.224 | 322 | 171 | 11 | 253 | 567 | 18 | 273 | 1.37e-18 | 87.8 |
| Msa0007970 | AT2G16405.1 | 22.881 | 236 | 166 | 4 | 348 | 567 | 199 | 434 | 5.01e-12 | 69.3 |
Find 229 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACAACAACCATTCAAATT+TGG | 0.091286 | 1_1:+11482920 | Msa0007970:three_prime_UTR |
| AACTTCCACTTTCGGATTTC+AGG | 0.127892 | 1_1:+11482182 | Msa0007970:three_prime_UTR |
| GGAATTGACACCCTTGTTTA+TGG | 0.143018 | 1_1:+11479904 | Msa0007970:CDS |
| CTTATACAGGTAGGGATTAT+TGG | 0.170811 | 1_1:+11480653 | Msa0007970:intron |
| GAGGGTTTGCTGAGAGATTT+TGG | 0.182081 | 1_1:+11479080 | Msa0007970:CDS |
| TCCATGAATTCTTCAGAATT+TGG | 0.194639 | 1_1:+11479335 | Msa0007970:CDS |
| CACAACAACCATTCAAATTT+GGG | 0.196552 | 1_1:+11482921 | Msa0007970:three_prime_UTR |
| AAGAGGAATAACCGGCTTTC+AGG | 0.207009 | 1_1:+11481067 | Msa0007970:CDS |
| GTATTTGTGGATTTAATTAT+TGG | 0.219386 | 1_1:+11482537 | Msa0007970:three_prime_UTR |
| TGGTCATGGAGGTGAAATTT+TGG | 0.235145 | 1_1:+11480039 | Msa0007970:CDS |
| CTTACATAGATGTTGTAATT+TGG | 0.235674 | 1_1:-11478419 | None:intergenic |
| CTTGAGGTGACCTCTTATTT+AGG | 0.243028 | 1_1:-11481648 | None:intergenic |
| GGAACTTTCAGCTCTTTATA+TGG | 0.266044 | 1_1:+11479691 | Msa0007970:CDS |
| CAGACAAAGAGATTCTAAAT+TGG | 0.289557 | 1_1:-11482569 | None:intergenic |
| ATGAGTCTATTATCCATTCT+AGG | 0.289743 | 1_1:-11481962 | None:intergenic |
| ATGAGTTTGGTGAGGAGTTC+GGG | 0.295369 | 1_1:+11479480 | Msa0007970:CDS |
| TACTTGAACAGGTGCAGTTT+TGG | 0.301743 | 1_1:+11482669 | Msa0007970:three_prime_UTR |
| AAAGTGGATGGAATTGAGTT+TGG | 0.304155 | 1_1:+11479160 | Msa0007970:CDS |
| GTGTTTCATTCTCTGGTTGT+AGG | 0.305208 | 1_1:+11479627 | Msa0007970:CDS |
| CATGAGTTTGGTGAGGAGTT+CGG | 0.315528 | 1_1:+11479479 | Msa0007970:CDS |
| TTCTTCAGAATTTGGTGCTT+TGG | 0.317391 | 1_1:+11479343 | Msa0007970:CDS |
| ATACAGGATGTATCAACTTC+TGG | 0.321898 | 1_1:-11479857 | None:intergenic |
| CGCATCTGTTGCAGTACCTT+GGG | 0.326050 | 1_1:+11481579 | Msa0007970:CDS |
| GGATAAGTTGCGGAACCTTT+CGG | 0.326663 | 1_1:-11481733 | None:intergenic |
| GAGAATGTTCCAATCTTTCA+TGG | 0.333666 | 1_1:+11478335 | Msa0007970:five_prime_UTR |
| CTTGTTTGAAGGTTATTTAA+TGG | 0.334055 | 1_1:+11478920 | Msa0007970:five_prime_UTR |
| AAATTAATAACTGTATAAAA+TGG | 0.334182 | 1_1:+11482859 | Msa0007970:three_prime_UTR |
| TTGATAAAACTGTTCGTCTA+TGG | 0.334885 | 1_1:+11480230 | Msa0007970:CDS |
| TTTGGATCAGTCAGTGGTTT+CGG | 0.338155 | 1_1:+11479412 | Msa0007970:CDS |
| TCCTAAGGTCTTCCGGTTGA+TGG | 0.338998 | 1_1:+11479994 | Msa0007970:CDS |
| CTGATTGTCATGTTGTTGAT+TGG | 0.342478 | 1_1:+11480506 | Msa0007970:CDS |
| CAATCACAACTATGCTTACT+TGG | 0.344066 | 1_1:+11481026 | Msa0007970:CDS |
| GACAACCCTGAAGTTGATTC+TGG | 0.347739 | 1_1:+11479044 | Msa0007970:CDS |
| TGGTGCTTTGGTGGAGAATT+CGG | 0.352335 | 1_1:+11479355 | Msa0007970:CDS |
| ATAAAATCATTCCACAATTA+CGG | 0.355391 | 1_1:+11481904 | Msa0007970:CDS |
| ACCAAATTCTGAAGAATTCA+TGG | 0.356917 | 1_1:-11479336 | None:intergenic |
| ACCAGTTACCAGCATGAGTT+TGG | 0.360497 | 1_1:+11479467 | Msa0007970:CDS |
| TTCATTAGCGGATCAATAGA+TGG | 0.362082 | 1_1:+11480460 | Msa0007970:CDS |
| GACACCCTTGTTTATGGATA+AGG | 0.363962 | 1_1:+11479910 | Msa0007970:CDS |
| ACATTAAGCTCGCTGCATTA+AGG | 0.366523 | 1_1:-11481417 | None:intergenic |
| AGTTGATTCTGGTCCTCCTT+TGG | 0.373369 | 1_1:+11479055 | Msa0007970:CDS |
| CGTTGTCCTTGGAAAATTGC+TGG | 0.376834 | 1_1:+11482023 | Msa0007970:three_prime_UTR |
| AAGTTTACTGTGAGATAAAA+TGG | 0.377542 | 1_1:+11482505 | Msa0007970:three_prime_UTR |
| GGAGGACCAGAATCAACTTC+AGG | 0.378263 | 1_1:-11479050 | None:intergenic |
| TTGTTTGAAGGTTATTTAAT+GGG | 0.380231 | 1_1:+11478921 | Msa0007970:five_prime_UTR |
| TGTGGATTTAATTATTGGTT+GGG | 0.380495 | 1_1:+11482542 | Msa0007970:three_prime_UTR |
| AACCTTGAGAATTCGGTAGA+TGG | 0.380774 | 1_1:+11479191 | Msa0007970:CDS |
| TAGATGGAAAAGTGCGCATA+TGG | 0.387508 | 1_1:+11480476 | Msa0007970:CDS |
| TGATGGAGTGGAAGTAGGTT+TGG | 0.393251 | 1_1:+11479394 | Msa0007970:CDS |
| ACCAAACTCATGCTGGTAAC+TGG | 0.395389 | 1_1:-11479468 | None:intergenic |
| GAACTTTCAGCTCTTTATAT+GGG | 0.405806 | 1_1:+11479692 | Msa0007970:CDS |
| TAAATCCATAATTGAGGAAA+AGG | 0.408392 | 1_1:-11481992 | None:intergenic |
| CTTGCTAGTGCCGGCGAAGA+TGG | 0.410754 | 1_1:+11479779 | Msa0007970:CDS |
| AAAATGGTCAAAAGATGTAT+TGG | 0.416019 | 1_1:+11482875 | Msa0007970:three_prime_UTR |
| CTTTATACCCCAAATTTGAA+TGG | 0.421731 | 1_1:-11482929 | None:intergenic |
| GAAGACGGTGTTTCATTCTC+TGG | 0.423222 | 1_1:+11479620 | Msa0007970:CDS |
| TTCTGGTCCTCCTTTGGTGG+AGG | 0.423302 | 1_1:+11479061 | Msa0007970:CDS |
| TTGTGGATTTAATTATTGGT+TGG | 0.423828 | 1_1:+11482541 | Msa0007970:three_prime_UTR |
| CATATTCCTGTGTGAGGTAA+AGG | 0.424782 | 1_1:-11482323 | None:intergenic |
| TGAATTGTGGACCAGGAGTC+CGG | 0.426510 | 1_1:+11479106 | Msa0007970:CDS |
| TCCATCAACCGGAAGACCTT+AGG | 0.427294 | 1_1:-11479995 | None:intergenic |
| CGCCGGCACTAGCAAGATAC+TGG | 0.427472 | 1_1:-11479772 | None:intergenic |
| TGATTCTGGTCCTCCTTTGG+TGG | 0.429534 | 1_1:+11479058 | Msa0007970:CDS |
| TTCAGAATTTGGTGCTTTGG+TGG | 0.430345 | 1_1:+11479346 | Msa0007970:CDS |
| ATCGTGACTGCCGGTTGGGA+TGG | 0.431969 | 1_1:+11481877 | Msa0007970:CDS |
| TTACTTCGGCACGTTGTCCT+TGG | 0.432507 | 1_1:+11482012 | Msa0007970:three_prime_UTR |
| TCTTCTGGAAGAGGAATAAC+CGG | 0.432558 | 1_1:+11481059 | Msa0007970:CDS |
| CTTCCAACCTCAGGCATTTG+AGG | 0.434166 | 1_1:-11482622 | None:intergenic |
| ATGGTCAATCCTACTTGAAC+AGG | 0.434395 | 1_1:+11482658 | Msa0007970:three_prime_UTR |
| TCTGGTCCTCCTTTGGTGGA+GGG | 0.438960 | 1_1:+11479062 | Msa0007970:CDS |
| AAACCACTTCATGAGTTTCA+TGG | 0.440737 | 1_1:+11480019 | Msa0007970:CDS |
| AACAAGGAGAATCTGATAAC+AGG | 0.441398 | 1_1:+11479591 | Msa0007970:CDS |
| AGGAATGATGGAGTGGAAGT+AGG | 0.444491 | 1_1:+11479389 | Msa0007970:CDS |
| TTGTAGGATTCAGCGAGTTA+AGG | 0.446374 | 1_1:+11479643 | Msa0007970:CDS |
| AGAAATTATACCTGTCCATC+AGG | 0.448537 | 1_1:-11480568 | None:intergenic |
| ACCTTTGACTGCAGCCTGCT+CGG | 0.454623 | 1_1:-11482106 | None:intergenic |
| TAGACCCCATGCATGACAAT+TGG | 0.455729 | 1_1:-11481851 | None:intergenic |
| GAGGTTGGAAGGGTGATGAT+TGG | 0.456034 | 1_1:+11482634 | Msa0007970:three_prime_UTR |
| TAGCTGATTGTTACAGCCTA+TGG | 0.464034 | 1_1:+11482727 | Msa0007970:three_prime_UTR |
| GTGCTATCGGCCTGATGGAC+AGG | 0.464270 | 1_1:+11480558 | Msa0007970:CDS |
| TGGTTAAGTGTTGCTTGTCT+TGG | 0.464741 | 1_1:+11482284 | Msa0007970:three_prime_UTR |
| GAAAGTGGTCTTTCCTAGAA+TGG | 0.464886 | 1_1:+11481949 | Msa0007970:three_prime_UTR |
| AAAGAGAGAGAGGGAGAGAG+AGG | 0.465389 | 1_1:+11482452 | Msa0007970:three_prime_UTR |
| AGAATTCGGCATGCGAAGAT+AGG | 0.469347 | 1_1:+11479369 | Msa0007970:CDS |
| ACTTCCACTTTCGGATTTCA+GGG | 0.474365 | 1_1:+11482183 | Msa0007970:three_prime_UTR |
| AAGCAGCAACCATGAAAGAT+TGG | 0.475958 | 1_1:-11478344 | None:intergenic |
| AGTAATCGTGACTGCCGGTT+GGG | 0.477149 | 1_1:+11481873 | Msa0007970:CDS |
| ATTCACCGTAAAATAAATAC+AGG | 0.478244 | 1_1:-11479873 | None:intergenic |
| AAAGACCACTTTCATTTCAA+AGG | 0.478965 | 1_1:-11481939 | None:intergenic |
| GGGATTATTGGCTCCATGAC+AGG | 0.482718 | 1_1:+11480665 | Msa0007970:CDS |
| TCGTGACTGCCGGTTGGGAT+GGG | 0.482840 | 1_1:+11481878 | Msa0007970:CDS |
| TACTTCCAATTGTCATGCAT+GGG | 0.483434 | 1_1:+11481846 | Msa0007970:CDS |
| AGGTTGGAAGGGTGATGATT+GGG | 0.484257 | 1_1:+11482635 | Msa0007970:three_prime_UTR |
| CTTCATGAGTTTCATGGTCA+TGG | 0.484621 | 1_1:+11480025 | Msa0007970:CDS |
| CAATCAACAACATGACAATC+AGG | 0.489078 | 1_1:-11480505 | None:intergenic |
| GAAGTGGTTTCTCCATCAAC+CGG | 0.489392 | 1_1:-11480006 | None:intergenic |
| CTCAAATGCCTGAGGTTGGA+AGG | 0.489458 | 1_1:+11482623 | Msa0007970:three_prime_UTR |
| CATATATCAGTACATGGAAA+AGG | 0.490002 | 1_1:+11482371 | Msa0007970:three_prime_UTR |
| ATAACTTTGTTAAAATCTTG+TGG | 0.491780 | 1_1:-11481207 | None:intergenic |
| CTTTCATTTCAAAGGAGTAC+AGG | 0.491830 | 1_1:-11481931 | None:intergenic |
| TTCCAACCTCAGGCATTTGA+GGG | 0.492078 | 1_1:-11482621 | None:intergenic |
| GATGATGATTATTTCATTAG+CGG | 0.495396 | 1_1:+11480448 | Msa0007970:CDS |
| ATCATCACCCTTCCAACCTC+AGG | 0.495542 | 1_1:-11482631 | None:intergenic |
| TTACTCTTGGGGCTTGAAGT+AGG | 0.496923 | 1_1:-11481769 | None:intergenic |
| ACGCATCTGTTGCAGTACCT+TGG | 0.499424 | 1_1:+11481578 | Msa0007970:CDS |
| GATATTCATTCAAGAGGAAG+TGG | 0.500151 | 1_1:+11482479 | Msa0007970:three_prime_UTR |
| GTGAGATAAAATGGTGGTGG+GGG | 0.500289 | 1_1:+11482514 | Msa0007970:three_prime_UTR |
| GCTCCATGACAGGCAATTGT+CGG | 0.502618 | 1_1:+11480675 | Msa0007970:CDS |
| GCAGTATTTGCTGTCATCGT+CGG | 0.510836 | 1_1:+11480207 | Msa0007970:intron |
| GAAGTAGGAAGTTTCTCCTC+GGG | 0.512166 | 1_1:-11481754 | None:intergenic |
| GAGGACCAGAATCAACTTCA+GGG | 0.513061 | 1_1:-11479049 | None:intergenic |
| TTGTCACCGCAGTGTGCTAT+CGG | 0.513075 | 1_1:+11480545 | Msa0007970:CDS |
| AGATTGTGTGAAAGAGAGAG+AGG | 0.517870 | 1_1:+11482442 | Msa0007970:three_prime_UTR |
| CTAGCAAGATACTGGCCGTC+CGG | 0.518249 | 1_1:-11479764 | None:intergenic |
| AAGATTGTGTCTTGAAAGTG+AGG | 0.519750 | 1_1:-11478380 | None:intergenic |
| CAAAGTCATATATCAGTACA+TGG | 0.523365 | 1_1:+11482365 | Msa0007970:three_prime_UTR |
| GTACTCCTTTGAAATGAAAG+TGG | 0.524216 | 1_1:+11481934 | Msa0007970:exon |
| AGTTGGATGTCCTAAATAAG+AGG | 0.524247 | 1_1:+11481638 | Msa0007970:CDS |
| CCTCAATTATGGATTTACTT+CGG | 0.524294 | 1_1:+11481998 | Msa0007970:three_prime_UTR |
| GAATTGTGGACCAGGAGTCC+GGG | 0.534742 | 1_1:+11479107 | Msa0007970:CDS |
| ACTGTGAGATAAAATGGTGG+TGG | 0.534754 | 1_1:+11482511 | Msa0007970:three_prime_UTR |
| GAGATTAATAGAATGAAAGA+TGG | 0.537127 | 1_1:+11479236 | Msa0007970:CDS |
| GCATGCGAAGATAGGAATGA+TGG | 0.541227 | 1_1:+11479377 | Msa0007970:CDS |
| ATGAAATAATCATCATCCAC+AGG | 0.541795 | 1_1:-11480442 | None:intergenic |
| AATCCCCTGAAATCCGAAAG+TGG | 0.541990 | 1_1:-11482187 | None:intergenic |
| GTCCCTCAAATGCCTGAGGT+TGG | 0.543855 | 1_1:+11482619 | Msa0007970:three_prime_UTR |
| ACCGAGCAGGCTGCAGTCAA+AGG | 0.543883 | 1_1:+11482105 | Msa0007970:three_prime_UTR |
| TCTAACACTACCCGGACTCC+TGG | 0.545596 | 1_1:-11479117 | None:intergenic |
| TCAACTTCGACAGCATCAAA+AGG | 0.547195 | 1_1:+11482079 | Msa0007970:three_prime_UTR |
| TTCCATCTACCGAATTCTCA+AGG | 0.548317 | 1_1:-11479193 | None:intergenic |
| TCACAAGTCAGAATCATTGA+AGG | 0.548563 | 1_1:+11481246 | Msa0007970:CDS |
| GGCCAGTATCTTGCTAGTGC+CGG | 0.549193 | 1_1:+11479770 | Msa0007970:CDS |
| GAGTAAGTTTATAAAGTGGA+TGG | 0.549532 | 1_1:+11479148 | Msa0007970:CDS |
| GCAGTGTGCTATCGGCCTGA+TGG | 0.550180 | 1_1:+11480553 | Msa0007970:CDS |
| GTAGGAGTAAGTTTATAAAG+TGG | 0.551153 | 1_1:+11479144 | Msa0007970:CDS |
| AAACCGACAATTGCCTGTCA+TGG | 0.552139 | 1_1:-11480678 | None:intergenic |
| GTACTTCCAATTGTCATGCA+TGG | 0.556893 | 1_1:+11481845 | Msa0007970:CDS |
| CCGAAGTAAATCCATAATTG+AGG | 0.560233 | 1_1:-11481998 | None:intergenic |
| TCAATGCAAGAAACAAAGAA+AGG | 0.562391 | 1_1:+11479670 | Msa0007970:CDS |
| TGTGGAATGTTAGTGACGAC+GGG | 0.565541 | 1_1:+11481503 | Msa0007970:CDS |
| AACTGTTCGTCTATGGCAAG+TGG | 0.567280 | 1_1:+11480237 | Msa0007970:CDS |
| CTCAGCAAACCCTCCACCAA+AGG | 0.567962 | 1_1:-11479071 | None:intergenic |
| TAATCTTTCTATCCATCTCA+TGG | 0.567987 | 1_1:+11482593 | Msa0007970:three_prime_UTR |
| TTTATCCTTATCCATAAACA+AGG | 0.568961 | 1_1:-11479915 | None:intergenic |
| CTGTGAGATAAAATGGTGGT+GGG | 0.569280 | 1_1:+11482512 | Msa0007970:three_prime_UTR |
| GGAAAAGATATTCATTCAAG+AGG | 0.570215 | 1_1:+11482473 | Msa0007970:three_prime_UTR |
| CATCAAAAGGATAACCGAGC+AGG | 0.571167 | 1_1:+11482092 | Msa0007970:three_prime_UTR |
| ACTCCTCACCAAACTCATGC+TGG | 0.572712 | 1_1:-11479475 | None:intergenic |
| TAGTAATCGTGACTGCCGGT+TGG | 0.573289 | 1_1:+11481872 | Msa0007970:CDS |
| CTTTCTATCCATCTCATGGT+AGG | 0.575824 | 1_1:+11482597 | Msa0007970:three_prime_UTR |
| ACTTATCAGTTCATGACAAG+TGG | 0.577251 | 1_1:+11482216 | Msa0007970:three_prime_UTR |
| TATTTGGATTCTATTCCGAA+AGG | 0.577615 | 1_1:+11481718 | Msa0007970:CDS |
| CTGTGGAATGTTAGTGACGA+CGG | 0.578440 | 1_1:+11481502 | Msa0007970:CDS |
| AAGATGGAATTGTGCGATTG+TGG | 0.579171 | 1_1:+11479795 | Msa0007970:CDS |
| TTGGATATGAATTGTGGACC+AGG | 0.579478 | 1_1:+11479099 | Msa0007970:CDS |
| TGAAGTAGGAAGTTTCTCCT+CGG | 0.582779 | 1_1:-11481755 | None:intergenic |
| ATTAATAGAATGAAAGATGG+TGG | 0.583671 | 1_1:+11479239 | Msa0007970:CDS |
| GAGTTTGGTGAGGAGTTCGG+GGG | 0.584552 | 1_1:+11479482 | Msa0007970:CDS |
| CTTACAAAAGCATATCTGAT+GGG | 0.584862 | 1_1:-11482395 | None:intergenic |
| GTGTCAATCTCAGATGCAAA+TGG | 0.586470 | 1_1:+11479014 | Msa0007970:CDS |
| ATATACATTTGAGTCTTCAC+AGG | 0.587540 | 1_1:-11481479 | None:intergenic |
| GAATAAGAAGCACAATGGCT+AGG | 0.588859 | 1_1:+11478946 | Msa0007970:exon |
| AATATGCTGGCCCTTAAAAG+AGG | 0.589814 | 1_1:+11482340 | Msa0007970:three_prime_UTR |
| TACCTCACACAGGAATATGC+TGG | 0.589840 | 1_1:+11482327 | Msa0007970:three_prime_UTR |
| AGATGGAAAAGTGCGCATAT+GGG | 0.590347 | 1_1:+11480477 | Msa0007970:CDS |
| CTACGCTCTCTAACACTACC+CGG | 0.590841 | 1_1:-11479125 | None:intergenic |
| GCGATTGTGGCAAGTTGTTG+AGG | 0.591064 | 1_1:+11479808 | Msa0007970:CDS |
| CACAAGTCAGAATCATTGAA+GGG | 0.591839 | 1_1:+11481247 | Msa0007970:CDS |
| ATCAACCGGAAGACCTTAGG+AGG | 0.592224 | 1_1:-11479992 | None:intergenic |
| CGGGTAGTGTTAGAGAGCGT+AGG | 0.595315 | 1_1:+11479126 | Msa0007970:CDS |
| TTGAGGGACCTACCATGAGA+TGG | 0.596048 | 1_1:-11482605 | None:intergenic |
| CTTCCACTTTCGGATTTCAG+GGG | 0.599140 | 1_1:+11482184 | Msa0007970:three_prime_UTR |
| TCTGTTGCAGTACCTTGGGG+TGG | 0.600067 | 1_1:+11481583 | Msa0007970:CDS |
| GTTTGAGTCGTGGACAAAGA+GGG | 0.600126 | 1_1:+11479514 | Msa0007970:CDS |
| GATTGTGTGAAAGAGAGAGA+GGG | 0.600542 | 1_1:+11482443 | Msa0007970:three_prime_UTR |
| TTTCTCCTCGGGATAAGTTG+CGG | 0.600952 | 1_1:-11481743 | None:intergenic |
| TGAGTTTGGTGAGGAGTTCG+GGG | 0.601417 | 1_1:+11479481 | Msa0007970:CDS |
| GGATCAAGGCATACAGCTTG+AGG | 0.601512 | 1_1:-11481664 | None:intergenic |
| TCTTACAAAAGCATATCTGA+TGG | 0.602893 | 1_1:-11482396 | None:intergenic |
| TCTGACTTGTGAATCAGCAC+AGG | 0.603387 | 1_1:-11481235 | None:intergenic |
| TCGCACAATTCCATCTTCGC+CGG | 0.604000 | 1_1:-11479789 | None:intergenic |
| TGAGATAAAATGGTGGTGGG+GGG | 0.604223 | 1_1:+11482515 | Msa0007970:three_prime_UTR |
| GTACAGGTAATCCGTAATTG+TGG | 0.604825 | 1_1:-11481915 | None:intergenic |
| AGTAGGTTTGGATCAGTCAG+TGG | 0.606958 | 1_1:+11479406 | Msa0007970:CDS |
| AGCAAACCCTCCACCAAAGG+AGG | 0.608011 | 1_1:-11479068 | None:intergenic |
| TGACCATGAAACTCATGAAG+TGG | 0.609680 | 1_1:-11480022 | None:intergenic |
| AAAACTGCACCTGTTCAAGT+AGG | 0.610039 | 1_1:-11482667 | None:intergenic |
| TCAAATGCCTGAGGTTGGAA+GGG | 0.610065 | 1_1:+11482624 | Msa0007970:three_prime_UTR |
| GTTTGAAAAGAACCGCTCGC+AGG | 0.610721 | 1_1:-11481557 | None:intergenic |
| ACAACAACCATTCAAATTTG+GGG | 0.613858 | 1_1:+11482922 | Msa0007970:three_prime_UTR |
| GCGTTCAATGACATGCATGA+TGG | 0.613983 | 1_1:+11479562 | Msa0007970:CDS |
| TGTGAGATAAAATGGTGGTG+GGG | 0.615276 | 1_1:+11482513 | Msa0007970:three_prime_UTR |
| TGAATCTGTGAACGCTGCTG+AGG | 0.618609 | 1_1:+11479436 | Msa0007970:CDS |
| ACTATGAAATTTAGTCCGGA+CGG | 0.619533 | 1_1:+11479749 | Msa0007970:CDS |
| TGTTTGAGTCGTGGACAAAG+AGG | 0.619572 | 1_1:+11479513 | Msa0007970:CDS |
| AATACTGTAGCAGTAGCCAT+AGG | 0.622064 | 1_1:-11482743 | None:intergenic |
| GGTCTAGTAATCGTGACTGC+CGG | 0.623697 | 1_1:+11481868 | Msa0007970:CDS |
| GATAACAGGAAGCACGAAGA+CGG | 0.624901 | 1_1:+11479605 | Msa0007970:CDS |
| TTATCCTTATCCATAAACAA+GGG | 0.630847 | 1_1:-11479914 | None:intergenic |
| CGAAGATAGGAATGATGGAG+TGG | 0.631147 | 1_1:+11479382 | Msa0007970:CDS |
| AAGACTCAAATGTATATCTG+TGG | 0.633398 | 1_1:+11481485 | Msa0007970:CDS |
| GGCCAGCATATTCCTGTGTG+AGG | 0.643577 | 1_1:-11482329 | None:intergenic |
| TTACAAAAGCATATCTGATG+GGG | 0.644230 | 1_1:-11482394 | None:intergenic |
| TGTCTGTATATATAGTTTGG+GGG | 0.647581 | 1_1:+11478850 | Msa0007970:intron |
| GGCAAGTTGTTGAGGATGAG+AGG | 0.647793 | 1_1:+11479816 | Msa0007970:CDS |
| TGTTGATTGGACTGATGTCA+AGG | 0.649634 | 1_1:+11480519 | Msa0007970:CDS |
| TCAGATTTCAAACCACCCCA+AGG | 0.650854 | 1_1:-11481595 | None:intergenic |
| ATGCATACAATTCAATCCTG+TGG | 0.653407 | 1_1:+11480426 | Msa0007970:CDS |
| ACTGTTCGTCTATGGCAAGT+GGG | 0.654097 | 1_1:+11480238 | Msa0007970:CDS |
| GCATCTGTTGCAGTACCTTG+GGG | 0.656255 | 1_1:+11481580 | Msa0007970:CDS |
| GACAAGTGGCTTCACGACCG+TGG | 0.657340 | 1_1:+11482230 | Msa0007970:three_prime_UTR |
| TTACCAGCATGAGTTTGGTG+AGG | 0.658249 | 1_1:+11479472 | Msa0007970:CDS |
| GGACAGGTATGTTTGAGTCG+TGG | 0.660337 | 1_1:+11479504 | Msa0007970:CDS |
| AAATTGCCTTTACCTCACAC+AGG | 0.665763 | 1_1:+11482317 | Msa0007970:three_prime_UTR |
| AGAGAGAGACACACACAGAG+AGG | 0.666209 | 1_1:+11478304 | Msa0007970:five_prime_UTR |
| TGGAAGGGTGATGATTGGGA+TGG | 0.670015 | 1_1:+11482639 | Msa0007970:three_prime_UTR |
| AGTGGATTACATTAGAACCA+CGG | 0.670913 | 1_1:-11482247 | None:intergenic |
| CATGAGTTTCATGGTCATGG+AGG | 0.673674 | 1_1:+11480028 | Msa0007970:CDS |
| AGTAGTGTGAGCAAAAGTCA+TGG | 0.676316 | 1_1:+11479263 | Msa0007970:CDS |
| AGGTTCCGCAACTTATCCCG+AGG | 0.678766 | 1_1:+11481738 | Msa0007970:CDS |
| ACTTCCAATTGTCATGCATG+GGG | 0.679789 | 1_1:+11481847 | Msa0007970:CDS |
| GTAGGTCCCTCAAATGCCTG+AGG | 0.680744 | 1_1:+11482615 | Msa0007970:three_prime_UTR |
| AGTTTGGTGAGGAGTTCGGG+GGG | 0.697573 | 1_1:+11479483 | Msa0007970:CDS |
| TTTACTGTGAGATAAAATGG+TGG | 0.702614 | 1_1:+11482508 | Msa0007970:three_prime_UTR |
| CAAGATATTCAAGCGCACGA+AGG | 0.706142 | 1_1:+11479716 | Msa0007970:CDS |
| GGGTTGAATAAGAAGCACAA+TGG | 0.710264 | 1_1:+11478941 | Msa0007970:exon |
| TGCATGATGGATGTACAACA+AGG | 0.718046 | 1_1:+11479575 | Msa0007970:CDS |
| AGAAGATTAAGTCCTGCGAG+CGG | 0.742727 | 1_1:+11481545 | Msa0007970:CDS |
| ATCAGGCCGATAGCACACTG+CGG | 0.805171 | 1_1:-11480551 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATCAATTAATTAACTA+CGG | - | chr1_1:11481171-11481190 | None:intergenic | 10.0% |
| !!! | CATTTCATATTTTAATTTTA+AGG | + | chr1_1:11481372-11481391 | Msa0007970:intron | 10.0% |
| !! | AAATTAATAACTGTATAAAA+TGG | + | chr1_1:11482859-11482878 | Msa0007970:three_prime_UTR | 10.0% |
| !!! | AAGAAAAAGAAACATTTTTA+AGG | - | chr1_1:11478475-11478494 | None:intergenic | 15.0% |
| !!! | TTTTTAACGAAAATTCAAAA+GGG | - | chr1_1:11478551-11478570 | None:intergenic | 15.0% |
| !!! | ATTTTTAACGAAAATTCAAA+AGG | - | chr1_1:11478552-11478571 | None:intergenic | 15.0% |
| !!! | TGATTTTTGTGATAAAAAAT+TGG | + | chr1_1:11478674-11478693 | Msa0007970:intron | 15.0% |
| !!! | GATTTTTGTGATAAAAAATT+GGG | + | chr1_1:11478675-11478694 | Msa0007970:intron | 15.0% |
| !! | CTAAATTTCATAGTAAAAAT+TGG | - | chr1_1:11479743-11479762 | None:intergenic | 15.0% |
| !! | TTCAAAATTGTATGAAAAAT+TGG | + | chr1_1:11480149-11480168 | Msa0007970:intron | 15.0% |
| !!! | TACAGTTATTAATTTTACAA+AGG | - | chr1_1:11482854-11482873 | None:intergenic | 15.0% |
| !!! | TTTTTAAGGTTTATTGAAGA+GGG | - | chr1_1:11478461-11478480 | None:intergenic | 20.0% |
| !!! | ATTTTTAAGGTTTATTGAAG+AGG | - | chr1_1:11478462-11478481 | None:intergenic | 20.0% |
| !! | TTTCGTTAAAAATATCTTGA+TGG | + | chr1_1:11478559-11478578 | Msa0007970:intron | 20.0% |
| !! | TTCGTTAAAAATATCTTGAT+GGG | + | chr1_1:11478560-11478579 | Msa0007970:intron | 20.0% |
| !! | TTGTTTGAAGGTTATTTAAT+GGG | + | chr1_1:11478921-11478940 | Msa0007970:five_prime_UTR | 20.0% |
| !!! | TTTTACTATGAAATTTAGTC+CGG | + | chr1_1:11479745-11479764 | Msa0007970:CDS | 20.0% |
| !!! | TACATCCTGTATTTATTTTA+CGG | + | chr1_1:11479868-11479887 | Msa0007970:CDS | 20.0% |
| !! | TGAAAAATTGGAAATTGATT+TGG | + | chr1_1:11480161-11480180 | Msa0007970:intron | 20.0% |
| !! | TAATTTCTTTACATTTCCTT+CGG | + | chr1_1:11480583-11480602 | Msa0007970:intron | 20.0% |
| !!! | AAATTTGTTTTGTGAAAAGA+GGG | + | chr1_1:11480944-11480963 | Msa0007970:intron | 20.0% |
| !! | ATAACTTTGTTAAAATCTTG+TGG | - | chr1_1:11481210-11481229 | None:intergenic | 20.0% |
| !!! | ACAAGATTTTAACAAAGTTA+TGG | + | chr1_1:11481209-11481228 | Msa0007970:CDS | 20.0% |
| !!! | CATTGAAAATTCTAAAAAGT+TGG | + | chr1_1:11481621-11481640 | Msa0007970:CDS | 20.0% |
| !! | TAGAATCCAAATAAAAATCT+TGG | - | chr1_1:11481711-11481730 | None:intergenic | 20.0% |
| !! | ATAAAATCATTCCACAATTA+CGG | + | chr1_1:11481904-11481923 | Msa0007970:CDS | 20.0% |
| !! | GTATTTGTGGATTTAATTAT+TGG | + | chr1_1:11482537-11482556 | Msa0007970:three_prime_UTR | 20.0% |
| !! | AAAAGATGTATTGGAAAAAT+AGG | + | chr1_1:11482884-11482903 | Msa0007970:three_prime_UTR | 20.0% |
| !! | AAAGATGTATTGGAAAAATA+GGG | + | chr1_1:11482885-11482904 | Msa0007970:three_prime_UTR | 20.0% |
| ! | CTTACATAGATGTTGTAATT+TGG | - | chr1_1:11478422-11478441 | None:intergenic | 25.0% |
| ! | AAATGAAAATTGTACTTCGT+TGG | - | chr1_1:11478498-11478517 | None:intergenic | 25.0% |
| ! | TTGTGTCTGTATATATAGTT+TGG | + | chr1_1:11478847-11478866 | Msa0007970:intron | 25.0% |
| ! | TGTGTCTGTATATATAGTTT+GGG | + | chr1_1:11478848-11478867 | Msa0007970:intron | 25.0% |
| !! | AAAAAATGTTGCTTGTTTGA+AGG | + | chr1_1:11478909-11478928 | Msa0007970:five_prime_UTR | 25.0% |
| ! | CTTGTTTGAAGGTTATTTAA+TGG | + | chr1_1:11478920-11478939 | Msa0007970:five_prime_UTR | 25.0% |
| ! | GAGATTAATAGAATGAAAGA+TGG | + | chr1_1:11479236-11479255 | Msa0007970:CDS | 25.0% |
| ! | ATTAATAGAATGAAAGATGG+TGG | + | chr1_1:11479239-11479258 | Msa0007970:CDS | 25.0% |
| ! | ATTCACCGTAAAATAAATAC+AGG | - | chr1_1:11479876-11479895 | None:intergenic | 25.0% |
| ! | TTATCCTTATCCATAAACAA+GGG | - | chr1_1:11479917-11479936 | None:intergenic | 25.0% |
| ! | TTTATCCTTATCCATAAACA+AGG | - | chr1_1:11479918-11479937 | None:intergenic | 25.0% |
| ! | TAGAATACATAAGAACAGAA+AGG | - | chr1_1:11480318-11480337 | None:intergenic | 25.0% |
| ! | GATGATGATTATTTCATTAG+CGG | + | chr1_1:11480448-11480467 | Msa0007970:CDS | 25.0% |
| !! | TGAATTTGTTTACCTTATAC+AGG | + | chr1_1:11480640-11480659 | Msa0007970:intron | 25.0% |
| ! | GAATGTTCTCAAACTATTAT+CGG | + | chr1_1:11480847-11480866 | Msa0007970:intron | 25.0% |
| !!! | CAAATTTGTTTTGTGAAAAG+AGG | + | chr1_1:11480943-11480962 | Msa0007970:intron | 25.0% |
| ! | AAAAGAAAACAGAACTCAAT+TGG | - | chr1_1:11481125-11481144 | None:intergenic | 25.0% |
| ! | AAAAAAGAAGCTTCTATCTT+TGG | - | chr1_1:11481148-11481167 | None:intergenic | 25.0% |
| ! | AATGTCGTTGAAAAATTCAA+AGG | + | chr1_1:11481273-11481292 | Msa0007970:CDS | 25.0% |
| !!! | GATTTCTATATTTTGTTGTC+AGG | + | chr1_1:11481394-11481413 | Msa0007970:intron | 25.0% |
| !! | TCTAAGCCAAGATTTTTATT+TGG | + | chr1_1:11481702-11481721 | Msa0007970:CDS | 25.0% |
| !!! | AGTGAAGATTTTTTACTCTT+GGG | - | chr1_1:11481784-11481803 | None:intergenic | 25.0% |
| ! | TAAATCCATAATTGAGGAAA+AGG | - | chr1_1:11481995-11482014 | None:intergenic | 25.0% |
| ! | AAGTTTACTGTGAGATAAAA+TGG | + | chr1_1:11482505-11482524 | Msa0007970:three_prime_UTR | 25.0% |
| ! | TTGTGGATTTAATTATTGGT+TGG | + | chr1_1:11482541-11482560 | Msa0007970:three_prime_UTR | 25.0% |
| !! | TGTGGATTTAATTATTGGTT+GGG | + | chr1_1:11482542-11482561 | Msa0007970:three_prime_UTR | 25.0% |
| ! | AAAATGGTCAAAAGATGTAT+TGG | + | chr1_1:11482875-11482894 | Msa0007970:three_prime_UTR | 25.0% |
| ! | AAGATGTATTGGAAAAATAG+GGG | + | chr1_1:11482886-11482905 | Msa0007970:three_prime_UTR | 25.0% |
| TGAAGAGGGAAAAAAACATT+GGG | - | chr1_1:11478447-11478466 | None:intergenic | 30.0% | |
| TTGAAGAGGGAAAAAAACAT+TGG | - | chr1_1:11478448-11478467 | None:intergenic | 30.0% | |
| ! | CTTTTCGTGTTACAAAACAT+GGG | + | chr1_1:11478600-11478619 | Msa0007970:intron | 30.0% |
| TCATTGTTCTTTGTAAGACT+TGG | + | chr1_1:11478700-11478719 | Msa0007970:intron | 30.0% | |
| ! | TTTGTAAGACTTGGTTCAAT+GGG | + | chr1_1:11478709-11478728 | Msa0007970:intron | 30.0% |
| GTGTCTGTATATATAGTTTG+GGG | + | chr1_1:11478849-11478868 | Msa0007970:intron | 30.0% | |
| TGTCTGTATATATAGTTTGG+GGG | + | chr1_1:11478850-11478869 | Msa0007970:intron | 30.0% | |
| !!! | CAACATTTTTTCAAGCTAGT+GGG | - | chr1_1:11478900-11478919 | None:intergenic | 30.0% |
| ! | GAGATTTTGGATATGAATTG+TGG | + | chr1_1:11479093-11479112 | Msa0007970:CDS | 30.0% |
| GTAGGAGTAAGTTTATAAAG+TGG | + | chr1_1:11479144-11479163 | Msa0007970:CDS | 30.0% | |
| GAGTAAGTTTATAAAGTGGA+TGG | + | chr1_1:11479148-11479167 | Msa0007970:CDS | 30.0% | |
| TCAGAAAAACCTTGAGAATT+CGG | + | chr1_1:11479184-11479203 | Msa0007970:CDS | 30.0% | |
| TCCATGAATTCTTCAGAATT+TGG | + | chr1_1:11479335-11479354 | Msa0007970:CDS | 30.0% | |
| ! | ACCAAATTCTGAAGAATTCA+TGG | - | chr1_1:11479339-11479358 | None:intergenic | 30.0% |
| TCAATGCAAGAAACAAAGAA+AGG | + | chr1_1:11479670-11479689 | Msa0007970:CDS | 30.0% | |
| GAACTTTCAGCTCTTTATAT+GGG | + | chr1_1:11479692-11479711 | Msa0007970:CDS | 30.0% | |
| !! | TGAATCTGATGTCTTTTTCA+GGG | - | chr1_1:11479957-11479976 | None:intergenic | 30.0% |
| TTGATAAAACTGTTCGTCTA+TGG | + | chr1_1:11480230-11480249 | Msa0007970:CDS | 30.0% | |
| !!! | CTAGCTTTAACTTCTTGTTT+TGG | + | chr1_1:11480346-11480365 | Msa0007970:intron | 30.0% |
| ATGAAATAATCATCATCCAC+AGG | - | chr1_1:11480445-11480464 | None:intergenic | 30.0% | |
| GGAAGAAATGAAGATTCTAT+GGG | + | chr1_1:11480604-11480623 | Msa0007970:intron | 30.0% | |
| TTTGTTTACCTTATACAGGT+AGG | + | chr1_1:11480644-11480663 | Msa0007970:intron | 30.0% | |
| TTGTTTACCTTATACAGGTA+GGG | + | chr1_1:11480645-11480664 | Msa0007970:intron | 30.0% | |
| ! | AAAGAGGGATAATAACTTGT+TGG | + | chr1_1:11480959-11480978 | Msa0007970:intron | 30.0% |
| !! | AAGAGGGATAATAACTTGTT+GGG | + | chr1_1:11480960-11480979 | Msa0007970:intron | 30.0% |
| CTTGGTAAAAAGAAATCTTC+TGG | + | chr1_1:11481044-11481063 | Msa0007970:CDS | 30.0% | |
| ! | AAAAAGAAATCTTCTGGAAG+AGG | + | chr1_1:11481050-11481069 | Msa0007970:CDS | 30.0% |
| AAAAAACAATACCTGAAAGC+CGG | - | chr1_1:11481081-11481100 | None:intergenic | 30.0% | |
| GAACTCAATTGGTGTAAAAA+AGG | - | chr1_1:11481114-11481133 | None:intergenic | 30.0% | |
| ! | AATGTCTGCATCTTTTACTT+CGG | + | chr1_1:11481435-11481454 | Msa0007970:CDS | 30.0% |
| ATATACATTTGAGTCTTCAC+AGG | - | chr1_1:11481482-11481501 | None:intergenic | 30.0% | |
| AAGACTCAAATGTATATCTG+TGG | + | chr1_1:11481485-11481504 | Msa0007970:CDS | 30.0% | |
| !! | CTTAATCTTCTTAGCTTTTG+TGG | - | chr1_1:11481536-11481555 | None:intergenic | 30.0% |
| TATTTGGATTCTATTCCGAA+AGG | + | chr1_1:11481718-11481737 | Msa0007970:CDS | 30.0% | |
| !!! | GTGAAGATTTTTTACTCTTG+GGG | - | chr1_1:11481783-11481802 | None:intergenic | 30.0% |
| !!! | CAGTGAAGATTTTTTACTCT+TGG | - | chr1_1:11481785-11481804 | None:intergenic | 30.0% |
| AAAGACCACTTTCATTTCAA+AGG | - | chr1_1:11481942-11481961 | None:intergenic | 30.0% | |
| ATGAGTCTATTATCCATTCT+AGG | - | chr1_1:11481965-11481984 | None:intergenic | 30.0% | |
| CCTCAATTATGGATTTACTT+CGG | + | chr1_1:11481998-11482017 | Msa0007970:three_prime_UTR | 30.0% | |
| CAAAGTCATATATCAGTACA+TGG | + | chr1_1:11482365-11482384 | Msa0007970:three_prime_UTR | 30.0% | |
| CATATATCAGTACATGGAAA+AGG | + | chr1_1:11482371-11482390 | Msa0007970:three_prime_UTR | 30.0% | |
| ! | TTACAAAAGCATATCTGATG+GGG | - | chr1_1:11482397-11482416 | None:intergenic | 30.0% |
| ! | CTTACAAAAGCATATCTGAT+GGG | - | chr1_1:11482398-11482417 | None:intergenic | 30.0% |
| ! | TCTTACAAAAGCATATCTGA+TGG | - | chr1_1:11482399-11482418 | None:intergenic | 30.0% |
| GGAAAAGATATTCATTCAAG+AGG | + | chr1_1:11482473-11482492 | Msa0007970:three_prime_UTR | 30.0% | |
| TTTACTGTGAGATAAAATGG+TGG | + | chr1_1:11482508-11482527 | Msa0007970:three_prime_UTR | 30.0% | |
| CAGACAAAGAGATTCTAAAT+TGG | - | chr1_1:11482572-11482591 | None:intergenic | 30.0% | |
| TAATCTTTCTATCCATCTCA+TGG | + | chr1_1:11482593-11482612 | Msa0007970:three_prime_UTR | 30.0% | |
| ! | CTGTGTATAGTCTCATTTTA+AGG | + | chr1_1:11482794-11482813 | Msa0007970:three_prime_UTR | 30.0% |
| GAGAATGTTCCAATCTTTCA+TGG | + | chr1_1:11478335-11478354 | Msa0007970:five_prime_UTR | 35.0% | |
| AAGATTGTGTCTTGAAAGTG+AGG | - | chr1_1:11478383-11478402 | None:intergenic | 35.0% | |
| ! | CCATGTTTTGTAACACGAAA+AGG | - | chr1_1:11478602-11478621 | None:intergenic | 35.0% |
| ! | CCTTTTCGTGTTACAAAACA+TGG | + | chr1_1:11478599-11478618 | Msa0007970:intron | 35.0% |
| ! | CTTTGTAAGACTTGGTTCAA+TGG | + | chr1_1:11478708-11478727 | Msa0007970:intron | 35.0% |
| !! | TTGGTTCAATGGGTTTTGAT+TGG | + | chr1_1:11478719-11478738 | Msa0007970:intron | 35.0% |
| !!! | TGGTTCAATGGGTTTTGATT+GGG | + | chr1_1:11478720-11478739 | Msa0007970:intron | 35.0% |
| !!! | GCAACATTTTTTCAAGCTAG+TGG | - | chr1_1:11478901-11478920 | None:intergenic | 35.0% |
| AAAGTGGATGGAATTGAGTT+TGG | + | chr1_1:11479160-11479179 | Msa0007970:CDS | 35.0% | |
| !! | GAGCAAAAGTCATGGTTTTA+TGG | + | chr1_1:11479271-11479290 | Msa0007970:CDS | 35.0% |
| !!! | CAAAAGTCATGGTTTTATGG+AGG | + | chr1_1:11479274-11479293 | Msa0007970:CDS | 35.0% |
| !!! | TGGAGGATTTCTTTTCAAGT+CGG | + | chr1_1:11479291-11479310 | Msa0007970:CDS | 35.0% |
| !! | TTCTTCAGAATTTGGTGCTT+TGG | + | chr1_1:11479343-11479362 | Msa0007970:CDS | 35.0% |
| CAAAGAGGGTTAAAAAGAGT+TGG | + | chr1_1:11479528-11479547 | Msa0007970:CDS | 35.0% | |
| AACAAGGAGAATCTGATAAC+AGG | + | chr1_1:11479591-11479610 | Msa0007970:CDS | 35.0% | |
| GGAACTTTCAGCTCTTTATA+TGG | + | chr1_1:11479691-11479710 | Msa0007970:CDS | 35.0% | |
| ACTATGAAATTTAGTCCGGA+CGG | + | chr1_1:11479749-11479768 | Msa0007970:CDS | 35.0% | |
| ATACAGGATGTATCAACTTC+TGG | - | chr1_1:11479860-11479879 | None:intergenic | 35.0% | |
| ! | TTTTACGGTGAATGATCTCT+CGG | + | chr1_1:11479883-11479902 | Msa0007970:CDS | 35.0% |
| ! | CTGAATCTGATGTCTTTTTC+AGG | - | chr1_1:11479958-11479977 | None:intergenic | 35.0% |
| !! | TTGCATCATTTTTCCTCCTA+AGG | + | chr1_1:11479979-11479998 | Msa0007970:CDS | 35.0% |
| AAACCACTTCATGAGTTTCA+TGG | + | chr1_1:11480019-11480038 | Msa0007970:CDS | 35.0% | |
| ! | GTGAAATTTTGGATCTCTCT+TGG | + | chr1_1:11480050-11480069 | Msa0007970:CDS | 35.0% |
| ! | GTTTTCTCACACAGTAACTA+TGG | + | chr1_1:11480280-11480299 | Msa0007970:CDS | 35.0% |
| ATGCATACAATTCAATCCTG+TGG | + | chr1_1:11480426-11480445 | Msa0007970:CDS | 35.0% | |
| ! | TTCATTAGCGGATCAATAGA+TGG | + | chr1_1:11480460-11480479 | Msa0007970:CDS | 35.0% |
| CAATCAACAACATGACAATC+AGG | - | chr1_1:11480508-11480527 | None:intergenic | 35.0% | |
| CTGATTGTCATGTTGTTGAT+TGG | + | chr1_1:11480506-11480525 | Msa0007970:CDS | 35.0% | |
| AGAAATTATACCTGTCCATC+AGG | - | chr1_1:11480571-11480590 | None:intergenic | 35.0% | |
| AGAATCTTCATTTCTTCCGA+AGG | - | chr1_1:11480602-11480621 | None:intergenic | 35.0% | |
| CGGAAGAAATGAAGATTCTA+TGG | + | chr1_1:11480603-11480622 | Msa0007970:intron | 35.0% | |
| CAATAATCCCTACCTGTATA+AGG | - | chr1_1:11480655-11480674 | None:intergenic | 35.0% | |
| CTTATACAGGTAGGGATTAT+TGG | + | chr1_1:11480653-11480672 | Msa0007970:intron | 35.0% | |
| !!! | TGTCGGTTTTACAATGTATC+AGG | + | chr1_1:11480692-11480711 | Msa0007970:CDS | 35.0% |
| ACACATCCAATATGAAGTAC+CGG | - | chr1_1:11480773-11480792 | None:intergenic | 35.0% | |
| TTGAATGTTGAATGTCGTGT+CGG | - | chr1_1:11480822-11480841 | None:intergenic | 35.0% | |
| !!! | GTTGGGTTTGCTTTTGTTTT+TGG | + | chr1_1:11480977-11480996 | Msa0007970:intron | 35.0% |
| CAATCACAACTATGCTTACT+TGG | + | chr1_1:11481026-11481045 | Msa0007970:CDS | 35.0% | |
| TCACAAGTCAGAATCATTGA+AGG | + | chr1_1:11481246-11481265 | Msa0007970:CDS | 35.0% | |
| CACAAGTCAGAATCATTGAA+GGG | + | chr1_1:11481247-11481266 | Msa0007970:CDS | 35.0% | |
| TGTTTCGCTCTCACTTTATA+AGG | + | chr1_1:11481301-11481320 | Msa0007970:intron | 35.0% | |
| ! | GCTCTCACTTTATAAGGTTT+TGG | + | chr1_1:11481307-11481326 | Msa0007970:intron | 35.0% |
| AGTTGGATGTCCTAAATAAG+AGG | + | chr1_1:11481638-11481657 | Msa0007970:CDS | 35.0% | |
| TGGCTTAGAGAAAAAGAAGA+CGG | - | chr1_1:11481691-11481710 | None:intergenic | 35.0% | |
| TACTTCCAATTGTCATGCAT+GGG | + | chr1_1:11481846-11481865 | Msa0007970:CDS | 35.0% | |
| ! | CTTTCATTTCAAAGGAGTAC+AGG | - | chr1_1:11481934-11481953 | None:intergenic | 35.0% |
| !! | GTACTCCTTTGAAATGAAAG+TGG | + | chr1_1:11481934-11481953 | Msa0007970:exon | 35.0% |
| ! | AGTGTCCTTTTCCTCAATTA+TGG | + | chr1_1:11481987-11482006 | Msa0007970:three_prime_UTR | 35.0% |
| CCGAAGTAAATCCATAATTG+AGG | - | chr1_1:11482001-11482020 | None:intergenic | 35.0% | |
| !!! | CGAAACTGCAGTCTTTTTTA+AGG | - | chr1_1:11482136-11482155 | None:intergenic | 35.0% |
| ! | ACTTTTCGAACTTCCACTTT+CGG | + | chr1_1:11482174-11482193 | Msa0007970:three_prime_UTR | 35.0% |
| ACTTATCAGTTCATGACAAG+TGG | + | chr1_1:11482216-11482235 | Msa0007970:three_prime_UTR | 35.0% | |
| !! | AGTGGATTACATTAGAACCA+CGG | - | chr1_1:11482250-11482269 | None:intergenic | 35.0% |
| TCCACTGAAAAATGAAGAAG+TGG | + | chr1_1:11482264-11482283 | Msa0007970:three_prime_UTR | 35.0% | |
| !! | ACCACTTCTTCATTTTTCAG+TGG | - | chr1_1:11482268-11482287 | None:intergenic | 35.0% |
| ! | TGACTTTGCACCTCTTTTAA+GGG | - | chr1_1:11482353-11482372 | None:intergenic | 35.0% |
| ! | ATGACTTTGCACCTCTTTTA+AGG | - | chr1_1:11482354-11482373 | None:intergenic | 35.0% |
| ! | GCTTTTGTAAGACTCTTGTT+TGG | + | chr1_1:11482407-11482426 | Msa0007970:three_prime_UTR | 35.0% |
| GATATTCATTCAAGAGGAAG+TGG | + | chr1_1:11482479-11482498 | Msa0007970:three_prime_UTR | 35.0% | |
| !!! | GTATAGTCTCATTTTAAGGC+TGG | + | chr1_1:11482798-11482817 | Msa0007970:three_prime_UTR | 35.0% |
| AAGCAGCAACCATGAAAGAT+TGG | - | chr1_1:11478347-11478366 | None:intergenic | 40.0% | |
| !!! | GTTTTGATTGGGATCTCTGT+TGG | + | chr1_1:11478731-11478750 | Msa0007970:intron | 40.0% |
| ! | ATAGTTTGGGGGTGTAGATA+AGG | + | chr1_1:11478861-11478880 | Msa0007970:intron | 40.0% |
| ! | GGGTTGAATAAGAAGCACAA+TGG | + | chr1_1:11478941-11478960 | Msa0007970:exon | 40.0% |
| ! | GAATAAGAAGCACAATGGCT+AGG | + | chr1_1:11478946-11478965 | Msa0007970:exon | 40.0% |
| GTGTCAATCTCAGATGCAAA+TGG | + | chr1_1:11479014-11479033 | Msa0007970:CDS | 40.0% | |
| TTGGATATGAATTGTGGACC+AGG | + | chr1_1:11479099-11479118 | Msa0007970:CDS | 40.0% | |
| AACCTTGAGAATTCGGTAGA+TGG | + | chr1_1:11479191-11479210 | Msa0007970:CDS | 40.0% | |
| TTCCATCTACCGAATTCTCA+AGG | - | chr1_1:11479196-11479215 | None:intergenic | 40.0% | |
| AGTAGTGTGAGCAAAAGTCA+TGG | + | chr1_1:11479263-11479282 | Msa0007970:CDS | 40.0% | |
| !! | TTCAGAATTTGGTGCTTTGG+TGG | + | chr1_1:11479346-11479365 | Msa0007970:CDS | 40.0% |
| TTTGGATCAGTCAGTGGTTT+CGG | + | chr1_1:11479412-11479431 | Msa0007970:CDS | 40.0% | |
| !! | TGCATGATGGATGTACAACA+AGG | + | chr1_1:11479575-11479594 | Msa0007970:CDS | 40.0% |
| GTGTTTCATTCTCTGGTTGT+AGG | + | chr1_1:11479627-11479646 | Msa0007970:CDS | 40.0% | |
| TTGTAGGATTCAGCGAGTTA+AGG | + | chr1_1:11479643-11479662 | Msa0007970:CDS | 40.0% | |
| AAGATGGAATTGTGCGATTG+TGG | + | chr1_1:11479795-11479814 | Msa0007970:CDS | 40.0% | |
| ! | GGAATTGACACCCTTGTTTA+TGG | + | chr1_1:11479904-11479923 | Msa0007970:CDS | 40.0% |
| ! | GACACCCTTGTTTATGGATA+AGG | + | chr1_1:11479910-11479929 | Msa0007970:CDS | 40.0% |
| ! | TTTTTCCTCCTAAGGTCTTC+CGG | + | chr1_1:11479987-11480006 | Msa0007970:CDS | 40.0% |
| TGACCATGAAACTCATGAAG+TGG | - | chr1_1:11480025-11480044 | None:intergenic | 40.0% | |
| CTTCATGAGTTTCATGGTCA+TGG | + | chr1_1:11480025-11480044 | Msa0007970:CDS | 40.0% | |
| ! | TGGTCATGGAGGTGAAATTT+TGG | + | chr1_1:11480039-11480058 | Msa0007970:CDS | 40.0% |
| !! | ATAAGAACAGAAAGGCGTTG+AGG | - | chr1_1:11480310-11480329 | None:intergenic | 40.0% |
| ! | TAGATGGAAAAGTGCGCATA+TGG | + | chr1_1:11480476-11480495 | Msa0007970:CDS | 40.0% |
| ! | AGATGGAAAAGTGCGCATAT+GGG | + | chr1_1:11480477-11480496 | Msa0007970:CDS | 40.0% |
| ! | TGTTGATTGGACTGATGTCA+AGG | + | chr1_1:11480519-11480538 | Msa0007970:CDS | 40.0% |
| TTTATCTGCATGTGTAGCAC+CGG | + | chr1_1:11480751-11480770 | Msa0007970:intron | 40.0% | |
| TTCAACTTACGTATCGTGTC+TGG | + | chr1_1:11480885-11480904 | Msa0007970:intron | 40.0% | |
| ! | TCTTCTGGAAGAGGAATAAC+CGG | + | chr1_1:11481059-11481078 | Msa0007970:CDS | 40.0% |
| ACATTAAGCTCGCTGCATTA+AGG | - | chr1_1:11481420-11481439 | None:intergenic | 40.0% | |
| ! | TCTGCATCTTTTACTTCGGA+TGG | + | chr1_1:11481439-11481458 | Msa0007970:CDS | 40.0% |
| ! | CTTGAGGTGACCTCTTATTT+AGG | - | chr1_1:11481651-11481670 | None:intergenic | 40.0% |
| AAAAAGAAGACGGTGGATCA+AGG | - | chr1_1:11481681-11481700 | None:intergenic | 40.0% | |
| CTTAGAGAAAAAGAAGACGG+TGG | - | chr1_1:11481688-11481707 | None:intergenic | 40.0% | |
| TGAAGTAGGAAGTTTCTCCT+CGG | - | chr1_1:11481758-11481777 | None:intergenic | 40.0% | |
| GTACTTCCAATTGTCATGCA+TGG | + | chr1_1:11481845-11481864 | Msa0007970:CDS | 40.0% | |
| ACTTCCAATTGTCATGCATG+GGG | + | chr1_1:11481847-11481866 | Msa0007970:CDS | 40.0% | |
| GTACAGGTAATCCGTAATTG+TGG | - | chr1_1:11481918-11481937 | None:intergenic | 40.0% | |
| GAAAGTGGTCTTTCCTAGAA+TGG | + | chr1_1:11481949-11481968 | Msa0007970:three_prime_UTR | 40.0% | |
| TCAACTTCGACAGCATCAAA+AGG | + | chr1_1:11482079-11482098 | Msa0007970:three_prime_UTR | 40.0% | |
| AACTTCCACTTTCGGATTTC+AGG | + | chr1_1:11482182-11482201 | Msa0007970:three_prime_UTR | 40.0% | |
| ACTTCCACTTTCGGATTTCA+GGG | + | chr1_1:11482183-11482202 | Msa0007970:three_prime_UTR | 40.0% | |
| !! | TGGTTAAGTGTTGCTTGTCT+TGG | + | chr1_1:11482284-11482303 | Msa0007970:three_prime_UTR | 40.0% |
| AAATTGCCTTTACCTCACAC+AGG | + | chr1_1:11482317-11482336 | Msa0007970:three_prime_UTR | 40.0% | |
| CATATTCCTGTGTGAGGTAA+AGG | - | chr1_1:11482326-11482345 | None:intergenic | 40.0% | |
| AATATGCTGGCCCTTAAAAG+AGG | + | chr1_1:11482340-11482359 | Msa0007970:three_prime_UTR | 40.0% | |
| AGATTGTGTGAAAGAGAGAG+AGG | + | chr1_1:11482442-11482461 | Msa0007970:three_prime_UTR | 40.0% | |
| GATTGTGTGAAAGAGAGAGA+GGG | + | chr1_1:11482443-11482462 | Msa0007970:three_prime_UTR | 40.0% | |
| ACTGTGAGATAAAATGGTGG+TGG | + | chr1_1:11482511-11482530 | Msa0007970:three_prime_UTR | 40.0% | |
| CTGTGAGATAAAATGGTGGT+GGG | + | chr1_1:11482512-11482531 | Msa0007970:three_prime_UTR | 40.0% | |
| ! | TGTGAGATAAAATGGTGGTG+GGG | + | chr1_1:11482513-11482532 | Msa0007970:three_prime_UTR | 40.0% |
| CTTTCTATCCATCTCATGGT+AGG | + | chr1_1:11482597-11482616 | Msa0007970:three_prime_UTR | 40.0% | |
| ATGGTCAATCCTACTTGAAC+AGG | + | chr1_1:11482658-11482677 | Msa0007970:three_prime_UTR | 40.0% | |
| AAAACTGCACCTGTTCAAGT+AGG | - | chr1_1:11482670-11482689 | None:intergenic | 40.0% | |
| ! | TACTTGAACAGGTGCAGTTT+TGG | + | chr1_1:11482669-11482688 | Msa0007970:three_prime_UTR | 40.0% |
| TAGCTGATTGTTACAGCCTA+TGG | + | chr1_1:11482727-11482746 | Msa0007970:three_prime_UTR | 40.0% | |
| AATACTGTAGCAGTAGCCAT+AGG | - | chr1_1:11482746-11482765 | None:intergenic | 40.0% | |
| ! | GACAACCCTGAAGTTGATTC+TGG | + | chr1_1:11479044-11479063 | Msa0007970:CDS | 45.0% |
| GAGGACCAGAATCAACTTCA+GGG | - | chr1_1:11479052-11479071 | None:intergenic | 45.0% | |
| ! | AGTTGATTCTGGTCCTCCTT+TGG | + | chr1_1:11479055-11479074 | Msa0007970:CDS | 45.0% |
| !!! | GAGGGTTTGCTGAGAGATTT+TGG | + | chr1_1:11479080-11479099 | Msa0007970:CDS | 45.0% |
| TGGTGCTTTGGTGGAGAATT+CGG | + | chr1_1:11479355-11479374 | Msa0007970:CDS | 45.0% | |
| AGAATTCGGCATGCGAAGAT+AGG | + | chr1_1:11479369-11479388 | Msa0007970:CDS | 45.0% | |
| GCATGCGAAGATAGGAATGA+TGG | + | chr1_1:11479377-11479396 | Msa0007970:CDS | 45.0% | |
| ! | CGAAGATAGGAATGATGGAG+TGG | + | chr1_1:11479382-11479401 | Msa0007970:CDS | 45.0% |
| ! | AGGAATGATGGAGTGGAAGT+AGG | + | chr1_1:11479389-11479408 | Msa0007970:CDS | 45.0% |
| TGATGGAGTGGAAGTAGGTT+TGG | + | chr1_1:11479394-11479413 | Msa0007970:CDS | 45.0% | |
| AGTAGGTTTGGATCAGTCAG+TGG | + | chr1_1:11479406-11479425 | Msa0007970:CDS | 45.0% | |
| ACCAGTTACCAGCATGAGTT+TGG | + | chr1_1:11479467-11479486 | Msa0007970:CDS | 45.0% | |
| ACCAAACTCATGCTGGTAAC+TGG | - | chr1_1:11479471-11479490 | None:intergenic | 45.0% | |
| ! | TTACCAGCATGAGTTTGGTG+AGG | + | chr1_1:11479472-11479491 | Msa0007970:CDS | 45.0% |
| ! | CATGAGTTTGGTGAGGAGTT+CGG | + | chr1_1:11479479-11479498 | Msa0007970:CDS | 45.0% |
| ! | ATGAGTTTGGTGAGGAGTTC+GGG | + | chr1_1:11479480-11479499 | Msa0007970:CDS | 45.0% |
| TGTTTGAGTCGTGGACAAAG+AGG | + | chr1_1:11479513-11479532 | Msa0007970:CDS | 45.0% | |
| GTTTGAGTCGTGGACAAAGA+GGG | + | chr1_1:11479514-11479533 | Msa0007970:CDS | 45.0% | |
| GCGTTCAATGACATGCATGA+TGG | + | chr1_1:11479562-11479581 | Msa0007970:CDS | 45.0% | |
| ! | GATAACAGGAAGCACGAAGA+CGG | + | chr1_1:11479605-11479624 | Msa0007970:CDS | 45.0% |
| GAAGACGGTGTTTCATTCTC+TGG | + | chr1_1:11479620-11479639 | Msa0007970:CDS | 45.0% | |
| CAAGATATTCAAGCGCACGA+AGG | + | chr1_1:11479716-11479735 | Msa0007970:CDS | 45.0% | |
| GAAGTGGTTTCTCCATCAAC+CGG | - | chr1_1:11480009-11480028 | None:intergenic | 45.0% | |
| CATGAGTTTCATGGTCATGG+AGG | + | chr1_1:11480028-11480047 | Msa0007970:CDS | 45.0% | |
| !! | GCAGTATTTGCTGTCATCGT+CGG | + | chr1_1:11480207-11480226 | Msa0007970:intron | 45.0% |
| AACTGTTCGTCTATGGCAAG+TGG | + | chr1_1:11480237-11480256 | Msa0007970:CDS | 45.0% | |
| ACTGTTCGTCTATGGCAAGT+GGG | + | chr1_1:11480238-11480257 | Msa0007970:CDS | 45.0% | |
| AAACCGACAATTGCCTGTCA+TGG | - | chr1_1:11480681-11480700 | None:intergenic | 45.0% | |
| ! | GGTGCTACACATGCAGATAA+AGG | - | chr1_1:11480752-11480771 | None:intergenic | 45.0% |
| !! | GTAGCACCGGTACTTCATAT+TGG | + | chr1_1:11480764-11480783 | Msa0007970:intron | 45.0% |
| ! | AAGAGGAATAACCGGCTTTC+AGG | + | chr1_1:11481067-11481086 | Msa0007970:CDS | 45.0% |
| ! | TCTGACTTGTGAATCAGCAC+AGG | - | chr1_1:11481238-11481257 | None:intergenic | 45.0% |
| CTGTGGAATGTTAGTGACGA+CGG | + | chr1_1:11481502-11481521 | Msa0007970:CDS | 45.0% | |
| TGTGGAATGTTAGTGACGAC+GGG | + | chr1_1:11481503-11481522 | Msa0007970:CDS | 45.0% | |
| AGAAGATTAAGTCCTGCGAG+CGG | + | chr1_1:11481545-11481564 | Msa0007970:CDS | 45.0% | |
| TCAGATTTCAAACCACCCCA+AGG | - | chr1_1:11481598-11481617 | None:intergenic | 45.0% | |
| GGATAAGTTGCGGAACCTTT+CGG | - | chr1_1:11481736-11481755 | None:intergenic | 45.0% | |
| TTTCTCCTCGGGATAAGTTG+CGG | - | chr1_1:11481746-11481765 | None:intergenic | 45.0% | |
| GAAGTAGGAAGTTTCTCCTC+GGG | - | chr1_1:11481757-11481776 | None:intergenic | 45.0% | |
| TTACTCTTGGGGCTTGAAGT+AGG | - | chr1_1:11481772-11481791 | None:intergenic | 45.0% | |
| TAGACCCCATGCATGACAAT+TGG | - | chr1_1:11481854-11481873 | None:intergenic | 45.0% | |
| ! | TTTTATTCGCCCATCCCAAC+CGG | - | chr1_1:11481890-11481909 | None:intergenic | 45.0% |
| CGTTGTCCTTGGAAAATTGC+TGG | + | chr1_1:11482023-11482042 | Msa0007970:three_prime_UTR | 45.0% | |
| ! | TAGCAGCCAGCAATTTTCCA+AGG | - | chr1_1:11482032-11482051 | None:intergenic | 45.0% |
| CATCAAAAGGATAACCGAGC+AGG | + | chr1_1:11482092-11482111 | Msa0007970:three_prime_UTR | 45.0% | |
| CTTCCACTTTCGGATTTCAG+GGG | + | chr1_1:11482184-11482203 | Msa0007970:three_prime_UTR | 45.0% | |
| AATCCCCTGAAATCCGAAAG+TGG | - | chr1_1:11482190-11482209 | None:intergenic | 45.0% | |
| TACCTCACACAGGAATATGC+TGG | + | chr1_1:11482327-11482346 | Msa0007970:three_prime_UTR | 45.0% | |
| !! | GTGAGATAAAATGGTGGTGG+GGG | + | chr1_1:11482514-11482533 | Msa0007970:three_prime_UTR | 45.0% |
| !! | TGAGATAAAATGGTGGTGGG+GGG | + | chr1_1:11482515-11482534 | Msa0007970:three_prime_UTR | 45.0% |
| TTCCAACCTCAGGCATTTGA+GGG | - | chr1_1:11482624-11482643 | None:intergenic | 45.0% | |
| TCAAATGCCTGAGGTTGGAA+GGG | + | chr1_1:11482624-11482643 | Msa0007970:three_prime_UTR | 45.0% | |
| AGGTTGGAAGGGTGATGATT+GGG | + | chr1_1:11482635-11482654 | Msa0007970:three_prime_UTR | 45.0% | |
| AGAGAGAGACACACACAGAG+AGG | + | chr1_1:11478304-11478323 | Msa0007970:five_prime_UTR | 50.0% | |
| GGGATCTCTGTTGGATCTCT+TGG | + | chr1_1:11478740-11478759 | Msa0007970:intron | 50.0% | |
| GGAGGACCAGAATCAACTTC+AGG | - | chr1_1:11479053-11479072 | None:intergenic | 50.0% | |
| TGATTCTGGTCCTCCTTTGG+TGG | + | chr1_1:11479058-11479077 | Msa0007970:CDS | 50.0% | |
| TGAATTGTGGACCAGGAGTC+CGG | + | chr1_1:11479106-11479125 | Msa0007970:CDS | 50.0% | |
| CTACGCTCTCTAACACTACC+CGG | - | chr1_1:11479128-11479147 | None:intergenic | 50.0% | |
| TGAATCTGTGAACGCTGCTG+AGG | + | chr1_1:11479436-11479455 | Msa0007970:CDS | 50.0% | |
| ACTCCTCACCAAACTCATGC+TGG | - | chr1_1:11479478-11479497 | None:intergenic | 50.0% | |
| ! | TGAGTTTGGTGAGGAGTTCG+GGG | + | chr1_1:11479481-11479500 | Msa0007970:CDS | 50.0% |
| GGACAGGTATGTTTGAGTCG+TGG | + | chr1_1:11479504-11479523 | Msa0007970:CDS | 50.0% | |
| TCGCACAATTCCATCTTCGC+CGG | - | chr1_1:11479792-11479811 | None:intergenic | 50.0% | |
| GCGATTGTGGCAAGTTGTTG+AGG | + | chr1_1:11479808-11479827 | Msa0007970:CDS | 50.0% | |
| GGCAAGTTGTTGAGGATGAG+AGG | + | chr1_1:11479816-11479835 | Msa0007970:CDS | 50.0% | |
| ATCAACCGGAAGACCTTAGG+AGG | - | chr1_1:11479995-11480014 | None:intergenic | 50.0% | |
| TCCTAAGGTCTTCCGGTTGA+TGG | + | chr1_1:11479994-11480013 | Msa0007970:CDS | 50.0% | |
| TCCATCAACCGGAAGACCTT+AGG | - | chr1_1:11479998-11480017 | None:intergenic | 50.0% | |
| TTGTCACCGCAGTGTGCTAT+CGG | + | chr1_1:11480545-11480564 | Msa0007970:CDS | 50.0% | |
| !! | GGGATTATTGGCTCCATGAC+AGG | + | chr1_1:11480665-11480684 | Msa0007970:CDS | 50.0% |
| GCTCCATGACAGGCAATTGT+CGG | + | chr1_1:11480675-11480694 | Msa0007970:CDS | 50.0% | |
| GTTTGAAAAGAACCGCTCGC+AGG | - | chr1_1:11481560-11481579 | None:intergenic | 50.0% | |
| ACGCATCTGTTGCAGTACCT+TGG | + | chr1_1:11481578-11481597 | Msa0007970:CDS | 50.0% | |
| CGCATCTGTTGCAGTACCTT+GGG | + | chr1_1:11481579-11481598 | Msa0007970:CDS | 50.0% | |
| GCATCTGTTGCAGTACCTTG+GGG | + | chr1_1:11481580-11481599 | Msa0007970:CDS | 50.0% | |
| GGATCAAGGCATACAGCTTG+AGG | - | chr1_1:11481667-11481686 | None:intergenic | 50.0% | |
| GGTCTAGTAATCGTGACTGC+CGG | + | chr1_1:11481868-11481887 | Msa0007970:CDS | 50.0% | |
| TAGTAATCGTGACTGCCGGT+TGG | + | chr1_1:11481872-11481891 | Msa0007970:CDS | 50.0% | |
| ! | AGTAATCGTGACTGCCGGTT+GGG | + | chr1_1:11481873-11481892 | Msa0007970:CDS | 50.0% |
| TTACTTCGGCACGTTGTCCT+TGG | + | chr1_1:11482012-11482031 | Msa0007970:three_prime_UTR | 50.0% | |
| AAAGAGAGAGAGGGAGAGAG+AGG | + | chr1_1:11482452-11482471 | Msa0007970:three_prime_UTR | 50.0% | |
| TTGAGGGACCTACCATGAGA+TGG | - | chr1_1:11482608-11482627 | None:intergenic | 50.0% | |
| CTTCCAACCTCAGGCATTTG+AGG | - | chr1_1:11482625-11482644 | None:intergenic | 50.0% | |
| CTCAAATGCCTGAGGTTGGA+AGG | + | chr1_1:11482623-11482642 | Msa0007970:three_prime_UTR | 50.0% | |
| ATCATCACCCTTCCAACCTC+AGG | - | chr1_1:11482634-11482653 | None:intergenic | 50.0% | |
| GAGGTTGGAAGGGTGATGAT+TGG | + | chr1_1:11482634-11482653 | Msa0007970:three_prime_UTR | 50.0% | |
| TGGAAGGGTGATGATTGGGA+TGG | + | chr1_1:11482639-11482658 | Msa0007970:three_prime_UTR | 50.0% | |
| TTCTGGTCCTCCTTTGGTGG+AGG | + | chr1_1:11479061-11479080 | Msa0007970:CDS | 55.0% | |
| TCTGGTCCTCCTTTGGTGGA+GGG | + | chr1_1:11479062-11479081 | Msa0007970:CDS | 55.0% | |
| AGCAAACCCTCCACCAAAGG+AGG | - | chr1_1:11479071-11479090 | None:intergenic | 55.0% | |
| CTCAGCAAACCCTCCACCAA+AGG | - | chr1_1:11479074-11479093 | None:intergenic | 55.0% | |
| GAATTGTGGACCAGGAGTCC+GGG | + | chr1_1:11479107-11479126 | Msa0007970:CDS | 55.0% | |
| TCTAACACTACCCGGACTCC+TGG | - | chr1_1:11479120-11479139 | None:intergenic | 55.0% | |
| ! | CGGGTAGTGTTAGAGAGCGT+AGG | + | chr1_1:11479126-11479145 | Msa0007970:CDS | 55.0% |
| ! | GAGTTTGGTGAGGAGTTCGG+GGG | + | chr1_1:11479482-11479501 | Msa0007970:CDS | 55.0% |
| ! | AGTTTGGTGAGGAGTTCGGG+GGG | + | chr1_1:11479483-11479502 | Msa0007970:CDS | 55.0% |
| CTAGCAAGATACTGGCCGTC+CGG | - | chr1_1:11479767-11479786 | None:intergenic | 55.0% | |
| GGCCAGTATCTTGCTAGTGC+CGG | + | chr1_1:11479770-11479789 | Msa0007970:CDS | 55.0% | |
| ATCAGGCCGATAGCACACTG+CGG | - | chr1_1:11480554-11480573 | None:intergenic | 55.0% | |
| TGTCGGACACTGACACAGGT+GGG | - | chr1_1:11480805-11480824 | None:intergenic | 55.0% | |
| TCTGTTGCAGTACCTTGGGG+TGG | + | chr1_1:11481583-11481602 | Msa0007970:CDS | 55.0% | |
| AGGTTCCGCAACTTATCCCG+AGG | + | chr1_1:11481738-11481757 | Msa0007970:CDS | 55.0% | |
| ACCTTTGACTGCAGCCTGCT+CGG | - | chr1_1:11482109-11482128 | None:intergenic | 55.0% | |
| GGCCAGCATATTCCTGTGTG+AGG | - | chr1_1:11482332-11482351 | None:intergenic | 55.0% | |
| !! | ATGGTGGTGGGGGGTATTTG+TGG | + | chr1_1:11482524-11482543 | Msa0007970:three_prime_UTR | 55.0% |
| GTAGGTCCCTCAAATGCCTG+AGG | + | chr1_1:11482615-11482634 | Msa0007970:three_prime_UTR | 55.0% | |
| GTCCCTCAAATGCCTGAGGT+TGG | + | chr1_1:11482619-11482638 | Msa0007970:three_prime_UTR | 55.0% | |
| CGCCGGCACTAGCAAGATAC+TGG | - | chr1_1:11479775-11479794 | None:intergenic | 60.0% | |
| !! | CTTGCTAGTGCCGGCGAAGA+TGG | + | chr1_1:11479779-11479798 | Msa0007970:CDS | 60.0% |
| GCAGTGTGCTATCGGCCTGA+TGG | + | chr1_1:11480553-11480572 | Msa0007970:CDS | 60.0% | |
| ! | GTGCTATCGGCCTGATGGAC+AGG | + | chr1_1:11480558-11480577 | Msa0007970:CDS | 60.0% |
| GTGTCGGACACTGACACAGG+TGG | - | chr1_1:11480806-11480825 | None:intergenic | 60.0% | |
| GTCGTGTCGGACACTGACAC+AGG | - | chr1_1:11480809-11480828 | None:intergenic | 60.0% | |
| ! | ATCGTGACTGCCGGTTGGGA+TGG | + | chr1_1:11481877-11481896 | Msa0007970:CDS | 60.0% |
| ! | TCGTGACTGCCGGTTGGGAT+GGG | + | chr1_1:11481878-11481897 | Msa0007970:CDS | 60.0% |
| ACCGAGCAGGCTGCAGTCAA+AGG | + | chr1_1:11482105-11482124 | Msa0007970:three_prime_UTR | 60.0% | |
| GACAAGTGGCTTCACGACCG+TGG | + | chr1_1:11482230-11482249 | Msa0007970:three_prime_UTR | 60.0% | |
| GGTGAGGAGTTCGGGGGGAC+AGG | + | chr1_1:11479488-11479507 | Msa0007970:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 11478280 | 11482942 | 11478280 | ID=Msa0007970;Name=Msa0007970 |
| chr1_1 | mRNA | 11478280 | 11482942 | 11478280 | ID=Msa0007970-mRNA-1;Parent=Msa0007970;Name=Msa0007970-mRNA-1;_AED=0.05;_eAED=0.05;_QI=252|1|1|1|0.85|0.75|8|997|709 |
| chr1_1 | exon | 11478280 | 11478436 | 11478280 | ID=Msa0007970-mRNA-1:exon:4229;Parent=Msa0007970-mRNA-1 |
| chr1_1 | exon | 11478865 | 11480084 | 11478865 | ID=Msa0007970-mRNA-1:exon:4230;Parent=Msa0007970-mRNA-1 |
| chr1_1 | exon | 11480211 | 11480301 | 11480211 | ID=Msa0007970-mRNA-1:exon:4231;Parent=Msa0007970-mRNA-1 |
| chr1_1 | exon | 11480422 | 11480579 | 11480422 | ID=Msa0007970-mRNA-1:exon:4232;Parent=Msa0007970-mRNA-1 |
| chr1_1 | exon | 11480662 | 11480713 | 11480662 | ID=Msa0007970-mRNA-1:exon:4233;Parent=Msa0007970-mRNA-1 |
| chr1_1 | exon | 11481009 | 11481088 | 11481009 | ID=Msa0007970-mRNA-1:exon:4234;Parent=Msa0007970-mRNA-1 |
| chr1_1 | exon | 11481201 | 11481294 | 11481201 | ID=Msa0007970-mRNA-1:exon:4235;Parent=Msa0007970-mRNA-1 |
| chr1_1 | exon | 11481416 | 11482942 | 11481416 | ID=Msa0007970-mRNA-1:exon:4236;Parent=Msa0007970-mRNA-1 |
| chr1_1 | five_prime_UTR | 11478280 | 11478436 | 11478280 | ID=Msa0007970-mRNA-1:five_prime_utr;Parent=Msa0007970-mRNA-1 |
| chr1_1 | five_prime_UTR | 11478865 | 11478959 | 11478865 | ID=Msa0007970-mRNA-1:five_prime_utr;Parent=Msa0007970-mRNA-1 |
| chr1_1 | CDS | 11478960 | 11480084 | 11478960 | ID=Msa0007970-mRNA-1:cds;Parent=Msa0007970-mRNA-1 |
| chr1_1 | CDS | 11480211 | 11480301 | 11480211 | ID=Msa0007970-mRNA-1:cds;Parent=Msa0007970-mRNA-1 |
| chr1_1 | CDS | 11480422 | 11480579 | 11480422 | ID=Msa0007970-mRNA-1:cds;Parent=Msa0007970-mRNA-1 |
| chr1_1 | CDS | 11480662 | 11480713 | 11480662 | ID=Msa0007970-mRNA-1:cds;Parent=Msa0007970-mRNA-1 |
| chr1_1 | CDS | 11481009 | 11481088 | 11481009 | ID=Msa0007970-mRNA-1:cds;Parent=Msa0007970-mRNA-1 |
| chr1_1 | CDS | 11481201 | 11481294 | 11481201 | ID=Msa0007970-mRNA-1:cds;Parent=Msa0007970-mRNA-1 |
| chr1_1 | CDS | 11481416 | 11481945 | 11481416 | ID=Msa0007970-mRNA-1:cds;Parent=Msa0007970-mRNA-1 |
| chr1_1 | three_prime_UTR | 11481946 | 11482942 | 11481946 | ID=Msa0007970-mRNA-1:three_prime_utr;Parent=Msa0007970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
