Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0122630 | XP_013468329.1 | 98.936 | 470 | 2 | 2 | 1 | 467 | 1 | 470 | 0.0 | 938 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0122630 | sp|B9SZB6|ARGJ_RICCO | 75.693 | 469 | 112 | 1 | 1 | 467 | 1 | 469 | 0.0 | 699 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0122630 | A0A072VLB2 | 98.936 | 470 | 2 | 2 | 1 | 467 | 1 | 470 | 0.0 | 938 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0028060 | Msa0122630 | 0.813153 | 2.955975e-51 | -8.615850e-47 |
| Msa0029710 | Msa0122630 | 0.818588 | 1.812678e-52 | -8.615850e-47 |
| Msa0061960 | Msa0122630 | 0.841536 | 4.476470e-58 | -8.615850e-47 |
| Msa0077200 | Msa0122630 | 0.811070 | 8.413297e-51 | -8.615850e-47 |
| Msa0082700 | Msa0122630 | 0.804875 | 1.751110e-49 | -8.615850e-47 |
| Msa0122620 | Msa0122630 | 0.909092 | 8.339254e-82 | -8.615850e-47 |
| Msa0122630 | Msa0124990 | 0.824242 | 8.977431e-54 | -8.615850e-47 |
| Msa0122630 | Msa0413720 | 0.802619 | 5.147788e-49 | -8.615850e-47 |
| Msa0122630 | Msa0480220 | 0.812267 | 4.621092e-51 | -8.615850e-47 |
| Msa0122630 | Msa0505370 | 0.806622 | 7.523445e-50 | -8.615850e-47 |
| Msa0122630 | Msa0692080 | 0.802807 | 4.708164e-49 | -8.615850e-47 |
| Msa0122630 | Msa0930780 | 0.805923 | 1.056030e-49 | -8.615850e-47 |
| Msa0122630 | Msa1010730 | 0.800944 | 1.136268e-48 | -8.615850e-47 |
| Msa0122630 | Msa1091520 | 0.804050 | 2.601768e-49 | -8.615850e-47 |
| Msa0122630 | Msa1188630 | 0.806599 | 7.608319e-50 | -8.615850e-47 |
| Msa0122630 | Msa1323670 | 0.809674 | 1.683938e-50 | -8.615850e-47 |
| Msa0122630 | Msa1398480 | 0.801119 | 1.046400e-48 | -8.615850e-47 |
| Msa0122630 | Msa1452930 | 0.815225 | 1.030927e-51 | -8.615850e-47 |
| Msa0122630 | Msa1459380 | 0.802799 | 4.727244e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0122630 | MtrunA17_Chr1g0182411 | 98.936 | 470 | 2 | 2 | 1 | 467 | 1 | 470 | 0.0 | 938 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0122630 | AT2G37500.1 | 74.153 | 472 | 113 | 6 | 1 | 467 | 1 | 468 | 0.0 | 679 |
| Msa0122630 | AT2G37500.2 | 77.451 | 408 | 90 | 1 | 62 | 467 | 2 | 409 | 0.0 | 632 |
Find 194 sgRNAs with CRISPR-Local
Find 470 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATACCTTTGACTTTGAATT+TGG | 0.071455 | 1_3:-49430704 | None:intergenic |
| CCGAGCATGGTAGCCATATT+TGG | 0.195244 | 1_3:-49434728 | None:intergenic |
| GTTCCACCCTAAGTAAATTT+TGG | 0.210785 | 1_3:-49436557 | None:intergenic |
| CATTTCTCAGACTGTGTTCT+AGG | 0.216875 | 1_3:-49430627 | None:intergenic |
| AGGACCTTGGGGAAGGAAAA+TGG | 0.263937 | 1_3:-49430877 | None:intergenic |
| ATTGAATCCACTGGTGTAAT+TGG | 0.272665 | 1_3:+49433540 | Msa0122630:CDS |
| CAGAATAACTTACATAACTA+TGG | 0.288580 | 1_3:-49437216 | None:intergenic |
| TTCAAAGCTGCGGGAATATA+TGG | 0.302267 | 1_3:+49432764 | Msa0122630:CDS |
| ATACCTTTGACTTTGAATTT+GGG | 0.303599 | 1_3:-49430703 | None:intergenic |
| GCTTTGGCCAGTGGGCTGTC+TGG | 0.306110 | 1_3:+49435247 | Msa0122630:CDS |
| GATTCAATTAATACTTCTTC+GGG | 0.312164 | 1_3:-49433525 | None:intergenic |
| AAATTTACTTAGGGTGGAAC+TGG | 0.318789 | 1_3:+49436560 | Msa0122630:CDS |
| ATTGACTTAAATAGATGAAT+AGG | 0.319503 | 1_3:-49437628 | None:intergenic |
| GTTAGAATTCAGATATCTAT+TGG | 0.326828 | 1_3:+49436901 | Msa0122630:CDS |
| GATTAACACGGGATACAAAA+TGG | 0.327893 | 1_3:-49437300 | None:intergenic |
| GTTAGAAGCTACTGAAAATC+TGG | 0.327906 | 1_3:+49437407 | Msa0122630:three_prime_UTR |
| TGCTGCTGCAGCTGGTTACT+CGG | 0.329195 | 1_3:+49436521 | Msa0122630:CDS |
| AGCAGCAATGCGTCCCCAAT+TGG | 0.330422 | 1_3:-49436505 | None:intergenic |
| GATCATCAGGCTGCTGTATA+TGG | 0.333048 | 1_3:+49436474 | Msa0122630:intron |
| AACTGGCTGAAACTCGCGTT+TGG | 0.341506 | 1_3:+49430411 | Msa0122630:five_prime_UTR |
| GGATTCAATTAATACTTCTT+CGG | 0.346437 | 1_3:-49433526 | None:intergenic |
| GAGTGTGGCAATTGAGTCTT+TGG | 0.352539 | 1_3:+49434113 | Msa0122630:CDS |
| TGAAATAACATACAGTTATC+TGG | 0.352882 | 1_3:-49434905 | None:intergenic |
| TACAGTATGTTCTAGAGGTC+AGG | 0.353089 | 1_3:-49430345 | None:intergenic |
| CAATGATACTGTTATTGCTT+TGG | 0.355377 | 1_3:+49435231 | Msa0122630:CDS |
| GCAGCAATGCGTCCCCAATT+GGG | 0.356206 | 1_3:-49436504 | None:intergenic |
| TTAAATAGATGAATAGGATT+TGG | 0.360658 | 1_3:-49437622 | None:intergenic |
| AAGTTGTTGAGAAGTGAAAA+TGG | 0.365741 | 1_3:-49430679 | None:intergenic |
| ATTCTGAAATCAGTTCATAA+AGG | 0.366195 | 1_3:+49437233 | Msa0122630:three_prime_UTR |
| TCCATCCCAAGCTATAGATT+TGG | 0.369474 | 1_3:-49435796 | None:intergenic |
| GACCTGCTTCCAAGGACCTT+GGG | 0.370325 | 1_3:-49430889 | None:intergenic |
| ATCATCTTGCTTCAGGTAGA+TGG | 0.372651 | 1_3:+49435196 | Msa0122630:intron |
| TGGAATGATCCACCCAAATA+TGG | 0.374514 | 1_3:+49434715 | Msa0122630:CDS |
| TTCTGAAATCAGTTCATAAA+GGG | 0.381243 | 1_3:+49437234 | Msa0122630:three_prime_UTR |
| ATATCGTACACGTGCCAATA+TGG | 0.385844 | 1_3:+49437380 | Msa0122630:three_prime_UTR |
| CTTTGGCCAGTGGGCTGTCT+GGG | 0.389273 | 1_3:+49435248 | Msa0122630:CDS |
| ACTGGCTGAAACTCGCGTTT+GGG | 0.390085 | 1_3:+49430412 | Msa0122630:five_prime_UTR |
| AGCTTCTAACAATGCCATAT+TGG | 0.391576 | 1_3:-49437394 | None:intergenic |
| CAGTACGCGTCATATTCATT+TGG | 0.392085 | 1_3:-49437145 | None:intergenic |
| AGAGGTCAGGGAAGCAAGAT+TGG | 0.396326 | 1_3:-49430332 | None:intergenic |
| GGAAGAACTAAGGTCAGAAT+TGG | 0.397818 | 1_3:+49434674 | Msa0122630:CDS |
| CTGTTATTGCTTTGGCCAGT+GGG | 0.403150 | 1_3:+49435239 | Msa0122630:CDS |
| CCTTGGTGTCAAATTAAACT+TGG | 0.405781 | 1_3:+49437596 | Msa0122630:three_prime_UTR |
| TGTGAGCTTAAGTGTATGTT+TGG | 0.406973 | 1_3:-49430451 | None:intergenic |
| CGATGAGGCAATTCAACTTC+AGG | 0.407353 | 1_3:+49435297 | Msa0122630:CDS |
| TCTATTTAAGTCAATCTAAA+GGG | 0.413724 | 1_3:+49437636 | Msa0122630:three_prime_UTR |
| GAAGAACTAAGGTCAGAATT+GGG | 0.413959 | 1_3:+49434675 | Msa0122630:CDS |
| GGACGCATTGCTGCTGCAGC+TGG | 0.415749 | 1_3:+49436513 | Msa0122630:CDS |
| ACTTTGTAGGTCAGTGTGAC+TGG | 0.416559 | 1_3:+49436323 | Msa0122630:intron |
| CAAAGCAATAACAGTATCAT+TGG | 0.422503 | 1_3:-49435230 | None:intergenic |
| CCAAATATGGCTACCATGCT+CGG | 0.423756 | 1_3:+49434728 | Msa0122630:CDS |
| ACAAGCTGTAGGCTAGGAAA+TGG | 0.426810 | 1_3:+49430496 | Msa0122630:five_prime_UTR |
| ATCTATTTAAGTCAATCTAA+AGG | 0.427969 | 1_3:+49437635 | Msa0122630:three_prime_UTR |
| AGTTAGTGAATTCACTAGTA+AGG | 0.428403 | 1_3:-49433770 | None:intergenic |
| CGAGCATGGTAGCCATATTT+GGG | 0.434166 | 1_3:-49434727 | None:intergenic |
| TCTTATCTCCAGGGTGAAGC+AGG | 0.434230 | 1_3:+49433351 | Msa0122630:intron |
| CCTTGTTATCTAAAGGAGAT+AGG | 0.435088 | 1_3:+49437562 | Msa0122630:three_prime_UTR |
| CCGGGGTAACCAGTGACGTT+TGG | 0.436852 | 1_3:+49434844 | Msa0122630:CDS |
| GCTGCTGCAGCTGGTTACTC+GGG | 0.438224 | 1_3:+49436522 | Msa0122630:CDS |
| TGAAAGCTAACCTGCAGATA+TGG | 0.439584 | 1_3:-49432846 | None:intergenic |
| TATATGGTAGAGACCCCAAT+TGG | 0.443479 | 1_3:+49436490 | Msa0122630:CDS |
| CGTTTGGAGAAAGATGGTTC+AGG | 0.445690 | 1_3:+49434860 | Msa0122630:CDS |
| TGCACACAAGACAAATGAAA+AGG | 0.451692 | 1_3:-49437329 | None:intergenic |
| AGTAGTTATCTGAGAAAGGC+TGG | 0.454885 | 1_3:+49436862 | Msa0122630:CDS |
| CTGCCTCTGACAGCATTCCT+AGG | 0.455078 | 1_3:-49437503 | None:intergenic |
| GTCTTGCCAAATCTATAGCT+TGG | 0.456989 | 1_3:+49435790 | Msa0122630:CDS |
| CTCAGACTGTGTTCTAGGGT+TGG | 0.462786 | 1_3:-49430622 | None:intergenic |
| ACAGATACAAATGATGTTCA+AGG | 0.464949 | 1_3:-49437470 | None:intergenic |
| GGACCTTGGGGAAGGAAAAT+GGG | 0.467500 | 1_3:-49430876 | None:intergenic |
| CAAATATGGCTACCATGCTC+GGG | 0.472267 | 1_3:+49434729 | Msa0122630:CDS |
| TAACCAAAATTTACTTAGGG+TGG | 0.472742 | 1_3:+49436554 | Msa0122630:CDS |
| CTAAAGGAGATAGGATCAAA+TGG | 0.473949 | 1_3:+49437571 | Msa0122630:three_prime_UTR |
| CCCCATGCTTGTCCATGGCC+CGG | 0.480206 | 1_3:-49437070 | None:intergenic |
| GGAAGGAAAATGGGAGCAGC+AGG | 0.480592 | 1_3:-49430867 | None:intergenic |
| ACCGGGCCATGGACAAGCAT+GGG | 0.482124 | 1_3:+49437069 | Msa0122630:CDS |
| TCCCCAAGGTCCTTGGAAGC+AGG | 0.489414 | 1_3:+49430887 | Msa0122630:CDS |
| TACGAACTGTTGCAGGGGTG+AGG | 0.490264 | 1_3:+49436837 | Msa0122630:intron |
| TGGTTAGGTTGGAAGAACTA+AGG | 0.494399 | 1_3:+49434664 | Msa0122630:intron |
| TAGGTAATAACAACTGATGC+CGG | 0.496467 | 1_3:+49434825 | Msa0122630:intron |
| TAGAAAATGACCTGCTTCCA+AGG | 0.496506 | 1_3:-49430897 | None:intergenic |
| CTCTAGAACATACTGTAGCT+TGG | 0.497378 | 1_3:+49430351 | Msa0122630:five_prime_UTR |
| TGACCTGCTTCCAAGGACCT+TGG | 0.498551 | 1_3:-49430890 | None:intergenic |
| GACCGGGCCATGGACAAGCA+TGG | 0.499609 | 1_3:+49437068 | Msa0122630:CDS |
| CATCTTTCTCCAAACGTCAC+TGG | 0.501222 | 1_3:-49434853 | None:intergenic |
| CATGTGACAAGTGCAAGATC+AGG | 0.502061 | 1_3:-49432812 | None:intergenic |
| ATATCAGCCTTGTTATCTAA+AGG | 0.502389 | 1_3:+49437555 | Msa0122630:three_prime_UTR |
| AATTTACTTAGGGTGGAACT+GGG | 0.503712 | 1_3:+49436561 | Msa0122630:CDS |
| TCTTGCCAAATCTATAGCTT+GGG | 0.504405 | 1_3:+49435791 | Msa0122630:CDS |
| CTGCTGCAGCTGGTTACTCG+GGG | 0.508457 | 1_3:+49436523 | Msa0122630:CDS |
| CTAGTTAATAAACCTTCACT+AGG | 0.512771 | 1_3:+49437262 | Msa0122630:three_prime_UTR |
| GATACTTTACTAATGGATGG+TGG | 0.513441 | 1_3:+49436585 | Msa0122630:CDS |
| AGGTAATAACAACTGATGCC+GGG | 0.513509 | 1_3:+49434826 | Msa0122630:intron |
| GAGGTCAGGGAAGCAAGATT+GGG | 0.514827 | 1_3:-49430331 | None:intergenic |
| GGCTAGTAGTTATCTGAGAA+AGG | 0.519391 | 1_3:+49436858 | Msa0122630:CDS |
| GCAGAGGGTTTCAAAGCTGC+GGG | 0.523037 | 1_3:+49432755 | Msa0122630:CDS |
| ATTTCTCAGACTGTGTTCTA+GGG | 0.523947 | 1_3:-49430626 | None:intergenic |
| CCTACTAACAGGCAATGGAC+CGG | 0.525163 | 1_3:+49437051 | Msa0122630:intron |
| ATATGGTAGAGACCCCAATT+GGG | 0.526420 | 1_3:+49436491 | Msa0122630:CDS |
| ACAGGCAATGGACCGGGCCA+TGG | 0.528084 | 1_3:+49437058 | Msa0122630:intron |
| AGGAATGCTGTCAGAGGCAG+AGG | 0.528342 | 1_3:+49437506 | Msa0122630:three_prime_UTR |
| TTCACTAACTTCTTCAGATG+AGG | 0.529205 | 1_3:+49433783 | Msa0122630:CDS |
| TACCTTTGACTTTGAATTTG+GGG | 0.529534 | 1_3:-49430702 | None:intergenic |
| CCTATCTCCTTTAGATAACA+AGG | 0.530698 | 1_3:-49437562 | None:intergenic |
| GGGAACCACAATCGTTTGAC+CGG | 0.533492 | 1_3:+49436607 | Msa0122630:CDS |
| TACTTTACTAATGGATGGTG+GGG | 0.535018 | 1_3:+49436587 | Msa0122630:CDS |
| GGTGGAGTTACTGCTGCAGA+GGG | 0.537120 | 1_3:+49432740 | Msa0122630:CDS |
| GTTAGTGAATTCACTAGTAA+GGG | 0.537585 | 1_3:-49433769 | None:intergenic |
| GCTTAGCCCAGACAGCCCAC+TGG | 0.537832 | 1_3:-49435254 | None:intergenic |
| TGGGCGCCAGCGAAAAGTGA+AGG | 0.538029 | 1_3:+49430265 | None:intergenic |
| ACAGTATGTTCTAGAGGTCA+GGG | 0.538251 | 1_3:-49430344 | None:intergenic |
| GAAGTATTAATTGAATCCAC+TGG | 0.538453 | 1_3:+49433531 | Msa0122630:CDS |
| TGTTCATAATTTCAGCTACT+GGG | 0.539697 | 1_3:+49433495 | Msa0122630:intron |
| CAGTGACGTTTGGAGAAAGA+TGG | 0.539729 | 1_3:+49434854 | Msa0122630:CDS |
| CGTGCTGTGTTAACTAATGC+AGG | 0.543735 | 1_3:+49433120 | Msa0122630:CDS |
| AGGTGGAGTTACTGCTGCAG+AGG | 0.545711 | 1_3:+49432739 | Msa0122630:CDS |
| ACTGTTATTGCTTTGGCCAG+TGG | 0.547196 | 1_3:+49435238 | Msa0122630:CDS |
| GTAGTTATCTGAGAAAGGCT+GGG | 0.548834 | 1_3:+49436863 | Msa0122630:CDS |
| TTCCCCAAATTCAAAGTCAA+AGG | 0.551177 | 1_3:+49430700 | Msa0122630:CDS |
| GGGTTGACATTACCGCATCT+AGG | 0.552099 | 1_3:-49435324 | None:intergenic |
| CACAGCCCCATGCTTGTCCA+TGG | 0.552391 | 1_3:-49437075 | None:intergenic |
| ATACTTTACTAATGGATGGT+GGG | 0.553579 | 1_3:+49436586 | Msa0122630:CDS |
| TTTACTTAGGGTGGAACTGG+GGG | 0.556242 | 1_3:+49436563 | Msa0122630:CDS |
| CAGCAATGCGTCCCCAATTG+GGG | 0.558774 | 1_3:-49436503 | None:intergenic |
| TAGTGAGGCTGAAGCTGCAA+AGG | 0.559467 | 1_3:+49436352 | Msa0122630:CDS |
| GCACACAAGACAAATGAAAA+GGG | 0.560279 | 1_3:-49437328 | None:intergenic |
| TCACTAACTTCTTCAGATGA+GGG | 0.560329 | 1_3:+49433784 | Msa0122630:CDS |
| GGGCGCCAGCGAAAAGTGAA+GGG | 0.560808 | 1_3:+49430266 | None:intergenic |
| TGCAGAGGGTTTCAAAGCTG+CGG | 0.561008 | 1_3:+49432754 | Msa0122630:CDS |
| CTACTAACAGGCAATGGACC+GGG | 0.561183 | 1_3:+49437052 | Msa0122630:intron |
| CCGGGCCATGGACAAGCATG+GGG | 0.563162 | 1_3:+49437070 | Msa0122630:CDS |
| TATGGAGGGTTGCGCGCTGT+AGG | 0.564441 | 1_3:+49432782 | Msa0122630:CDS |
| AATTGGTCAAAGAATAAAGA+AGG | 0.568321 | 1_3:+49433557 | Msa0122630:CDS |
| ACCTGCTTCCAAGGACCTTG+GGG | 0.569998 | 1_3:-49430888 | None:intergenic |
| TAGTTAATAAACCTTCACTA+GGG | 0.573255 | 1_3:+49437263 | Msa0122630:three_prime_UTR |
| TCTTACCGGTCAAACGATTG+TGG | 0.575496 | 1_3:-49436612 | None:intergenic |
| CAGGGCAGATTCTGCAGCAG+TGG | 0.576520 | 1_3:+49434062 | Msa0122630:intron |
| GCTTCCAAGGACCTTGGGGA+AGG | 0.583623 | 1_3:-49430884 | None:intergenic |
| CTGGCTGAAACTCGCGTTTG+GGG | 0.585042 | 1_3:+49430413 | Msa0122630:five_prime_UTR |
| TGATTGATGACAAGTTGATA+CGG | 0.588339 | 1_3:-49430555 | None:intergenic |
| CCGCGATATGATAGAATGTG+TGG | 0.589545 | 1_3:+49433377 | Msa0122630:CDS |
| GATAGGATCAAATGGCACCT+TGG | 0.590725 | 1_3:+49437579 | Msa0122630:three_prime_UTR |
| ACAAGACAAATGAAAAGGGT+TGG | 0.592319 | 1_3:-49437324 | None:intergenic |
| TCTTTGACCAATTACACCAG+TGG | 0.593128 | 1_3:-49433547 | None:intergenic |
| AACAGAAACGCCCCTAGTGA+AGG | 0.593622 | 1_3:-49437274 | None:intergenic |
| ATTTACTTAGGGTGGAACTG+GGG | 0.594904 | 1_3:+49436562 | Msa0122630:CDS |
| GAAGCTACTGAAAATCTGGT+TGG | 0.596202 | 1_3:+49437411 | Msa0122630:three_prime_UTR |
| AGGGTCATTCACGACTAATG+TGG | 0.596492 | 1_3:+49432935 | Msa0122630:intron |
| TAGTTATCTGAGAAAGGCTG+GGG | 0.597977 | 1_3:+49436864 | Msa0122630:CDS |
| CACTAACTTCTTCAGATGAG+GGG | 0.598054 | 1_3:+49433785 | Msa0122630:CDS |
| TGTCCTTTCCAGGTAATGCA+AGG | 0.600909 | 1_3:+49435768 | Msa0122630:intron |
| AGGAGCGACGTGCCTCATTG+AGG | 0.601458 | 1_3:+49435821 | Msa0122630:CDS |
| AGGTCAAGCAAATGCAGCTA+CGG | 0.604603 | 1_3:+49433140 | Msa0122630:CDS |
| CAAGCTACAGTATGTTCTAG+AGG | 0.604892 | 1_3:-49430350 | None:intergenic |
| GGGGATACTTTACTAATGGA+TGG | 0.605599 | 1_3:+49436582 | Msa0122630:CDS |
| CCAAACGTCACTGGTTACCC+CGG | 0.608020 | 1_3:-49434844 | None:intergenic |
| TCTGCAGCAGTAACTCCACC+TGG | 0.610983 | 1_3:-49432737 | None:intergenic |
| CCAAGTTTAATTTGACACCA+AGG | 0.611379 | 1_3:-49437596 | None:intergenic |
| AAAGCTGCGGGAATATATGG+AGG | 0.611780 | 1_3:+49432767 | Msa0122630:CDS |
| ATAAGCAGTTATTAAGCGCA+CGG | 0.611956 | 1_3:+49437353 | Msa0122630:three_prime_UTR |
| GCCAAATCTATAGCTTGGGA+TGG | 0.612673 | 1_3:+49435795 | Msa0122630:CDS |
| AAGAACTAAGGTCAGAATTG+GGG | 0.613757 | 1_3:+49434676 | Msa0122630:CDS |
| GATGTTGATGCCATATCTGC+AGG | 0.614029 | 1_3:+49432836 | Msa0122630:CDS |
| TCTATAGCTTGGGATGGAGA+AGG | 0.616430 | 1_3:+49435801 | Msa0122630:CDS |
| AAAGGGTTGGTGATTAACAC+GGG | 0.616984 | 1_3:-49437311 | None:intergenic |
| AAACATACACTTAAGCTCAC+AGG | 0.618541 | 1_3:+49430453 | Msa0122630:five_prime_UTR |
| AGTAAGACATACCCCGAGCA+TGG | 0.619941 | 1_3:-49434741 | None:intergenic |
| ATGTGTGGAAAGCCTCGCAA+AGG | 0.627850 | 1_3:+49433392 | Msa0122630:CDS |
| GGCGCCAGCGAAAAGTGAAG+GGG | 0.627996 | 1_3:+49430267 | None:intergenic |
| AAAAGGGTTGGTGATTAACA+CGG | 0.629176 | 1_3:-49437312 | None:intergenic |
| AAATAGTACATACCTTTGCG+AGG | 0.634764 | 1_3:-49433404 | None:intergenic |
| AGAAGCTTGATTCTCCGTAG+TGG | 0.638632 | 1_3:-49430835 | None:intergenic |
| GGTAATAACAACTGATGCCG+GGG | 0.642212 | 1_3:+49434827 | Msa0122630:intron |
| TATGGTAGAGACCCCAATTG+GGG | 0.642606 | 1_3:+49436492 | Msa0122630:CDS |
| GCACCTAGGAATGCTGTCAG+AGG | 0.643108 | 1_3:+49437500 | Msa0122630:three_prime_UTR |
| TATCTGTGCTCACTGCACCT+AGG | 0.644776 | 1_3:+49437486 | Msa0122630:three_prime_UTR |
| CTTGCTAACAAGATCTGTTG+TGG | 0.651501 | 1_3:-49434091 | None:intergenic |
| CCACACATTCTATCATATCG+CGG | 0.652423 | 1_3:-49433377 | None:intergenic |
| CGATTATGTCAAAATAAATG+CGG | 0.654467 | 1_3:+49437108 | Msa0122630:CDS |
| TGCTGCAGCTGGTTACTCGG+GGG | 0.654672 | 1_3:+49436524 | Msa0122630:CDS |
| AGAAAGGCTGGGGAGACTCA+CGG | 0.655065 | 1_3:+49436874 | Msa0122630:CDS |
| AGATCTTGTTAGCAAGAGTG+TGG | 0.658285 | 1_3:+49434098 | Msa0122630:CDS |
| TGAACTTCTCAGATTCCAGG+TGG | 0.661236 | 1_3:+49432722 | Msa0122630:intron |
| GATTCACGCTGTATCCACTA+CGG | 0.662779 | 1_3:+49430821 | Msa0122630:CDS |
| GCATGGTAGCCATATTTGGG+TGG | 0.663519 | 1_3:-49434724 | None:intergenic |
| AAGCTGCGGGAATATATGGA+GGG | 0.664937 | 1_3:+49432768 | Msa0122630:CDS |
| AGAACTAAGGTCAGAATTGG+GGG | 0.666774 | 1_3:+49434677 | Msa0122630:CDS |
| ACTTCAGGCATGCCTAGATG+CGG | 0.678693 | 1_3:+49435312 | Msa0122630:CDS |
| AGTTAATAAACCTTCACTAG+GGG | 0.680990 | 1_3:+49437264 | Msa0122630:three_prime_UTR |
| AAATATGGCTACCATGCTCG+GGG | 0.688782 | 1_3:+49434730 | Msa0122630:CDS |
| GCGCCAGCGAAAAGTGAAGG+GGG | 0.696924 | 1_3:+49430268 | None:intergenic |
| AAATGGAGAGAAACGTTGTG+AGG | 0.702976 | 1_3:-49430662 | None:intergenic |
| TTCTTCTCTAGACAGCGATG+AGG | 0.718882 | 1_3:+49435282 | Msa0122630:CDS |
| GTATAAAACAAACCTCAATG+AGG | 0.723765 | 1_3:-49435833 | None:intergenic |
| TGTGACTGGTGCAAATAGTG+AGG | 0.734036 | 1_3:+49436337 | Msa0122630:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAACATATTTTAACA+AGG | + | chr1_3:49430384-49430403 | Msa0122630:five_prime_UTR | 10.0% |
| !!! | AAAAAAACATATTTTAACAA+GGG | + | chr1_3:49430385-49430404 | Msa0122630:five_prime_UTR | 10.0% |
| !! | AATTATATTGTAATTATGTT+AGG | + | chr1_3:49431122-49431141 | Msa0122630:intron | 10.0% |
| !!! | TTAAGTAAATATTTTTTGAT+TGG | + | chr1_3:49433322-49433341 | Msa0122630:intron | 10.0% |
| !!! | TAAGTAAATATTTTTTGATT+GGG | + | chr1_3:49433323-49433342 | Msa0122630:intron | 10.0% |
| !! | AAATGACAAATATAAATTTA+CGG | - | chr1_3:49433719-49433738 | None:intergenic | 10.0% |
| !!! | ATTGTATATTTCTATTAAAA+GGG | + | chr1_3:49434596-49434615 | Msa0122630:intron | 10.0% |
| !!! | ACTCAAAAATATATATATTT+TGG | + | chr1_3:49435144-49435163 | Msa0122630:intron | 10.0% |
| !! | AATTGTCCTATTTATATTAT+AGG | - | chr1_3:49431198-49431217 | None:intergenic | 15.0% |
| !!! | TATCTTGTTTTAGAATTTTT+TGG | + | chr1_3:49431690-49431709 | Msa0122630:intron | 15.0% |
| !!! | TTTAAGCTTTTATATGTATA+TGG | - | chr1_3:49432294-49432313 | None:intergenic | 15.0% |
| !!! | TACATCACAATTTTAAATTT+TGG | + | chr1_3:49432877-49432896 | Msa0122630:intron | 15.0% |
| !!! | ACATCACAATTTTAAATTTT+GGG | + | chr1_3:49432878-49432897 | Msa0122630:intron | 15.0% |
| !! | TCAACTAATGTATATTTATA+TGG | + | chr1_3:49434176-49434195 | Msa0122630:intron | 15.0% |
| !!! | AATTTTATCATTTTATGCAA+TGG | + | chr1_3:49434382-49434401 | Msa0122630:intron | 15.0% |
| !!! | CATTGTATATTTCTATTAAA+AGG | + | chr1_3:49434595-49434614 | Msa0122630:intron | 15.0% |
| !!! | TTGTATATTTCTATTAAAAG+GGG | + | chr1_3:49434597-49434616 | Msa0122630:intron | 15.0% |
| !! | ATAATTATGGAAATTGTAAA+GGG | - | chr1_3:49435347-49435366 | None:intergenic | 15.0% |
| !! | AATAATTATGGAAATTGTAA+AGG | - | chr1_3:49435348-49435367 | None:intergenic | 15.0% |
| !! | ATGATATGACAAAATAATTA+TGG | - | chr1_3:49435360-49435379 | None:intergenic | 15.0% |
| !!! | CTTTTATTTTTATTTTTTGC+AGG | - | chr1_3:49435624-49435643 | None:intergenic | 15.0% |
| !! | ATTAACCAAATATAAATACA+AGG | + | chr1_3:49435981-49436000 | Msa0122630:intron | 15.0% |
| !! | TTAAACCTTGTATTTATATT+TGG | - | chr1_3:49435989-49436008 | None:intergenic | 15.0% |
| !!! | AATAATTTTTTGTTTGAATC+TGG | + | chr1_3:49436427-49436446 | Msa0122630:intron | 15.0% |
| !!! | TTTTAACCAAAATTTACTTA+GGG | + | chr1_3:49436551-49436570 | Msa0122630:CDS | 15.0% |
| !! | AACTTTATAATATAGATAGA+CGG | - | chr1_3:49436817-49436836 | None:intergenic | 15.0% |
| !! | TCCAATCCTATAATATAAAT+AGG | + | chr1_3:49431189-49431208 | Msa0122630:intron | 20.0% |
| !! | TCCTATTTATATTATAGGAT+TGG | - | chr1_3:49431193-49431212 | None:intergenic | 20.0% |
| !! | TTATACACTACATATTGTAT+AGG | - | chr1_3:49431420-49431439 | None:intergenic | 20.0% |
| !!! | TCTAAGGTGTTTTTTTTTAA+TGG | - | chr1_3:49431579-49431598 | None:intergenic | 20.0% |
| !! | TAACAATGAACTTTGATTAT+TGG | - | chr1_3:49432354-49432373 | None:intergenic | 20.0% |
| !!! | TTTTTCTTTCTTTCACTATT+TGG | - | chr1_3:49432428-49432447 | None:intergenic | 20.0% |
| !!! | AATTTAAAATTGTGATGTAC+AGG | - | chr1_3:49432876-49432895 | None:intergenic | 20.0% |
| !!! | AATTATGAACATTTCTAGTA+AGG | - | chr1_3:49433486-49433505 | None:intergenic | 20.0% |
| !!! | ATATTTGTCATTTTGTTTTC+AGG | + | chr1_3:49433726-49433745 | Msa0122630:intron | 20.0% |
| !!! | TATTTGTCATTTTGTTTTCA+GGG | + | chr1_3:49433727-49433746 | Msa0122630:intron | 20.0% |
| !! | CAATAAATAAGAAACTAAAC+TGG | - | chr1_3:49433955-49433974 | None:intergenic | 20.0% |
| !!! | TGAAAAGTAGAAAAAAGTTT+TGG | - | chr1_3:49433996-49434015 | None:intergenic | 20.0% |
| !!! | TTTTTCTACTTTTCAATCTT+CGG | + | chr1_3:49434001-49434020 | Msa0122630:intron | 20.0% |
| !! | ATATATAAACACACTTTGTA+TGG | + | chr1_3:49434216-49434235 | Msa0122630:intron | 20.0% |
| !! | GGATAAATAATAAAATGCAA+TGG | + | chr1_3:49434259-49434278 | Msa0122630:intron | 20.0% |
| !! | TGATGTTTACGAAAAAAAAA+AGG | + | chr1_3:49434470-49434489 | Msa0122630:intron | 20.0% |
| !! | TATTTAACTACCAAAACTAT+GGG | - | chr1_3:49434549-49434568 | None:intergenic | 20.0% |
| !! | TTATTTAACTACCAAAACTA+TGG | - | chr1_3:49434550-49434569 | None:intergenic | 20.0% |
| !! | TAATAGAAATATACAATGTG+AGG | - | chr1_3:49434593-49434612 | None:intergenic | 20.0% |
| !!! | CTTTTTGAATGTTAAAATAG+TGG | + | chr1_3:49435561-49435580 | Msa0122630:intron | 20.0% |
| !!! | TTTTTATTTTTTGCAGGAAA+AGG | - | chr1_3:49435618-49435637 | None:intergenic | 20.0% |
| !! | ACATGAAATTTATCATTAAG+AGG | + | chr1_3:49435708-49435727 | Msa0122630:intron | 20.0% |
| !! | ACAGTTATATTGTGTATAAA+TGG | + | chr1_3:49436209-49436228 | Msa0122630:intron | 20.0% |
| !!! | CTTTTAACCAAAATTTACTT+AGG | + | chr1_3:49436550-49436569 | Msa0122630:CDS | 20.0% |
| !! | AAAAAAAACATCAATCTTAC+CGG | - | chr1_3:49436629-49436648 | None:intergenic | 20.0% |
| !!! | TTAGTTTTTGACAGTTAATA+TGG | - | chr1_3:49436750-49436769 | None:intergenic | 20.0% |
| !! | ATAATAAACATGACCATATT+AGG | - | chr1_3:49437016-49437035 | None:intergenic | 20.0% |
| !! | TTAAATAGATGAATAGGATT+TGG | - | chr1_3:49437625-49437644 | None:intergenic | 20.0% |
| !!! | ATTGACTTAAATAGATGAAT+AGG | - | chr1_3:49437631-49437650 | None:intergenic | 20.0% |
| !!! | TATTTTAACAAGGGTAAAAC+TGG | + | chr1_3:49430394-49430413 | Msa0122630:five_prime_UTR | 25.0% |
| !! | ATACCTTTGACTTTGAATTT+GGG | - | chr1_3:49430706-49430725 | None:intergenic | 25.0% |
| !! | AATACCTTTGACTTTGAATT+TGG | - | chr1_3:49430707-49430726 | None:intergenic | 25.0% |
| ! | AAATCAAGCTAGTTAGAAAA+TGG | + | chr1_3:49431005-49431024 | Msa0122630:intron | 25.0% |
| ! | AATCAAGCTAGTTAGAAAAT+GGG | + | chr1_3:49431006-49431025 | Msa0122630:intron | 25.0% |
| !! | TATAAGTACTGTAAAAACTC+AGG | - | chr1_3:49431283-49431302 | None:intergenic | 25.0% |
| !!! | TTCAACCACAATTTTGATTT+TGG | + | chr1_3:49431913-49431932 | Msa0122630:intron | 25.0% |
| !!! | ATCCTTAAACTTTGAAATAG+CGG | - | chr1_3:49432243-49432262 | None:intergenic | 25.0% |
| !!! | ACTTATTTGCTTTTTGCATT+GGG | - | chr1_3:49432389-49432408 | None:intergenic | 25.0% |
| !!! | AACTTATTTGCTTTTTGCAT+TGG | - | chr1_3:49432390-49432409 | None:intergenic | 25.0% |
| !! | GCAAAAAGCAAATAAGTTTT+AGG | + | chr1_3:49432392-49432411 | Msa0122630:intron | 25.0% |
| ! | ATGTTGATATGAAATGTTAG+AGG | - | chr1_3:49432610-49432629 | None:intergenic | 25.0% |
| !!! | ACAATTTTAAATTTTGGGTC+TGG | + | chr1_3:49432883-49432902 | Msa0122630:intron | 25.0% |
| !! | ATCAATTTTTGCAATTTGTC+AGG | + | chr1_3:49433095-49433114 | Msa0122630:intron | 25.0% |
| ! | GATTCAATTAATACTTCTTC+GGG | - | chr1_3:49433528-49433547 | None:intergenic | 25.0% |
| ! | GGATTCAATTAATACTTCTT+CGG | - | chr1_3:49433529-49433548 | None:intergenic | 25.0% |
| ! | AATTGGTCAAAGAATAAAGA+AGG | + | chr1_3:49433557-49433576 | Msa0122630:CDS | 25.0% |
| ! | TTGTTTGAATATTTCTCAAG+TGG | - | chr1_3:49433652-49433671 | None:intergenic | 25.0% |
| !!! | ATTTGTCATTTTGTTTTCAG+GGG | + | chr1_3:49433728-49433747 | Msa0122630:intron | 25.0% |
| ! | AGCAAAATATTCATAAATGC+AGG | - | chr1_3:49433816-49433835 | None:intergenic | 25.0% |
| !!! | GAAGTTTTTTTTATTGTGTG+TGG | + | chr1_3:49433872-49433891 | Msa0122630:intron | 25.0% |
| !!! | AAGTAGAAAAAAGTTTTGGT+GGG | - | chr1_3:49433992-49434011 | None:intergenic | 25.0% |
| !!! | AAAGTAGAAAAAAGTTTTGG+TGG | - | chr1_3:49433993-49434012 | None:intergenic | 25.0% |
| !! | GCATTTTATTATTTATCCAC+AGG | - | chr1_3:49434257-49434276 | None:intergenic | 25.0% |
| !! | ATCATTTTATGCAATGGTTA+TGG | + | chr1_3:49434388-49434407 | Msa0122630:intron | 25.0% |
| ! | TTTACGAAAAAAAAAAGGCA+AGG | + | chr1_3:49434475-49434494 | Msa0122630:intron | 25.0% |
| ! | TTACGAAAAAAAAAAGGCAA+GGG | + | chr1_3:49434476-49434495 | Msa0122630:intron | 25.0% |
| ! | TGTCTAACTCTTATTATTCT+TGG | + | chr1_3:49434637-49434656 | Msa0122630:intron | 25.0% |
| ! | GTCTAACTCTTATTATTCTT+GGG | + | chr1_3:49434638-49434657 | Msa0122630:intron | 25.0% |
| ! | TGAAATAACATACAGTTATC+TGG | - | chr1_3:49434908-49434927 | None:intergenic | 25.0% |
| !! | TTGTTTGTCAAAAGTGTATT+TGG | + | chr1_3:49435075-49435094 | Msa0122630:intron | 25.0% |
| !!! | TATTTTTGAGTAAAAGATCG+TGG | - | chr1_3:49435135-49435154 | None:intergenic | 25.0% |
| ! | AGTATATTATTCTGTTCAAC+AGG | - | chr1_3:49435394-49435413 | None:intergenic | 25.0% |
| ! | AACAAAAATCTGAATAGATG+AGG | - | chr1_3:49435960-49435979 | None:intergenic | 25.0% |
| ! | TACACAATATAACTGTAACT+AGG | - | chr1_3:49436205-49436224 | None:intergenic | 25.0% |
| ! | CTGTTTATTGTCTAATGAAT+TGG | + | chr1_3:49436702-49436721 | Msa0122630:intron | 25.0% |
| ! | TTTATTGTCTAATGAATTGG+TGG | + | chr1_3:49436705-49436724 | Msa0122630:intron | 25.0% |
| ! | ACAATAGCATAAGGTATAAA+CGG | - | chr1_3:49436794-49436813 | None:intergenic | 25.0% |
| ! | GTTAGAATTCAGATATCTAT+TGG | + | chr1_3:49436901-49436920 | Msa0122630:CDS | 25.0% |
| ! | TGTCTTGAATTTATAAGCAT+GGG | + | chr1_3:49436968-49436987 | Msa0122630:intron | 25.0% |
| ! | CGATTATGTCAAAATAAATG+CGG | + | chr1_3:49437108-49437127 | Msa0122630:CDS | 25.0% |
| ! | CAGAATAACTTACATAACTA+TGG | - | chr1_3:49437219-49437238 | None:intergenic | 25.0% |
| !!! | ATTCTGAAATCAGTTCATAA+AGG | + | chr1_3:49437233-49437252 | Msa0122630:three_prime_UTR | 25.0% |
| !!! | TTCTGAAATCAGTTCATAAA+GGG | + | chr1_3:49437234-49437253 | Msa0122630:three_prime_UTR | 25.0% |
| ! | TAGTTAATAAACCTTCACTA+GGG | + | chr1_3:49437263-49437282 | Msa0122630:three_prime_UTR | 25.0% |
| !! | AGCTAATTTTAACAAGCTGT+AGG | + | chr1_3:49430485-49430504 | Msa0122630:five_prime_UTR | 30.0% |
| ! | GAATTTTAGGCAATTTAGTG+CGG | + | chr1_3:49430518-49430537 | Msa0122630:five_prime_UTR | 30.0% |
| !! | TGATTGATGACAAGTTGATA+CGG | - | chr1_3:49430558-49430577 | None:intergenic | 30.0% |
| AAGTTGTTGAGAAGTGAAAA+TGG | - | chr1_3:49430682-49430701 | None:intergenic | 30.0% | |
| ! | TACCTTTGACTTTGAATTTG+GGG | - | chr1_3:49430705-49430724 | None:intergenic | 30.0% |
| TGTTTCAACTTTCATGTACA+AGG | - | chr1_3:49431222-49431241 | None:intergenic | 30.0% | |
| ! | AAATCAACTAGTTTGAGCTA+AGG | + | chr1_3:49431475-49431494 | Msa0122630:intron | 30.0% |
| ! | AATCAACTAGTTTGAGCTAA+GGG | + | chr1_3:49431476-49431495 | Msa0122630:intron | 30.0% |
| ! | TTGAAAAGTCTAGCATCTTT+TGG | - | chr1_3:49431898-49431917 | None:intergenic | 30.0% |
| TGTGTCCAAAATCAAAATTG+TGG | - | chr1_3:49431921-49431940 | None:intergenic | 30.0% | |
| !!! | ATTTTGATTTTGGACACAAG+TGG | + | chr1_3:49431923-49431942 | Msa0122630:intron | 30.0% |
| TTCATCTAAAGAGACAAGTT+TGG | + | chr1_3:49431955-49431974 | Msa0122630:intron | 30.0% | |
| ! | ACAATCTTTTCTATCATCTG+GGG | - | chr1_3:49431998-49432017 | None:intergenic | 30.0% |
| ! | CACAATCTTTTCTATCATCT+GGG | - | chr1_3:49431999-49432018 | None:intergenic | 30.0% |
| CCAAACATAGGTTAATCTAT+GGG | + | chr1_3:49432042-49432061 | Msa0122630:intron | 30.0% | |
| !!! | TATTTTTTGCAGGACAATGT+GGG | + | chr1_3:49432067-49432086 | Msa0122630:intron | 30.0% |
| !! | TATTGTTGTTTGCTAATGGT+TGG | - | chr1_3:49432211-49432230 | None:intergenic | 30.0% |
| ! | ATCCGCTATTTCAAAGTTTA+AGG | + | chr1_3:49432238-49432257 | Msa0122630:intron | 30.0% |
| GAAATTAGATACGTGCATAT+CGG | + | chr1_3:49432454-49432473 | Msa0122630:intron | 30.0% | |
| AAATTAGATACGTGCATATC+GGG | + | chr1_3:49432455-49432474 | Msa0122630:intron | 30.0% | |
| TAAAATTGTGATGTACAGGA+AGG | - | chr1_3:49432872-49432891 | None:intergenic | 30.0% | |
| TCTATCTTGATGAAAAAGCA+AGG | - | chr1_3:49433031-49433050 | None:intergenic | 30.0% | |
| ATGTTCATAATTTCAGCTAC+TGG | + | chr1_3:49433494-49433513 | Msa0122630:intron | 30.0% | |
| TGTTCATAATTTCAGCTACT+GGG | + | chr1_3:49433495-49433514 | Msa0122630:intron | 30.0% | |
| ! | GAAGTATTAATTGAATCCAC+TGG | + | chr1_3:49433531-49433550 | Msa0122630:CDS | 30.0% |
| !!! | TTTGTCATTTTGTTTTCAGG+GGG | + | chr1_3:49433729-49433748 | Msa0122630:intron | 30.0% |
| GTTAGTGAATTCACTAGTAA+GGG | - | chr1_3:49433772-49433791 | None:intergenic | 30.0% | |
| AGTTAGTGAATTCACTAGTA+AGG | - | chr1_3:49433773-49433792 | None:intergenic | 30.0% | |
| AAACTAAACTGGTGAAAGTA+AGG | - | chr1_3:49433944-49433963 | None:intergenic | 30.0% | |
| TAAACACACTTTGTATGGAT+AGG | + | chr1_3:49434221-49434240 | Msa0122630:intron | 30.0% | |
| GGGAACTATCATAAATATCA+AGG | - | chr1_3:49434529-49434548 | None:intergenic | 30.0% | |
| ! | TATGATAGTTCCCATAGTTT+TGG | + | chr1_3:49434536-49434555 | Msa0122630:intron | 30.0% |
| CTCTTATTATTCTTGGGTAT+TGG | + | chr1_3:49434644-49434663 | Msa0122630:intron | 30.0% | |
| !! | ATTATTCTTGGGTATTGGTT+AGG | + | chr1_3:49434649-49434668 | Msa0122630:intron | 30.0% |
| GCTTTCATGTTTCGAATATA+TGG | + | chr1_3:49434768-49434787 | Msa0122630:intron | 30.0% | |
| TAGACTGCAAATTCAGTTAA+TGG | + | chr1_3:49434938-49434957 | Msa0122630:intron | 30.0% | |
| AAATTCAGTTAATGGCATAG+TGG | + | chr1_3:49434946-49434965 | Msa0122630:intron | 30.0% | |
| CAAAGCAATAACAGTATCAT+TGG | - | chr1_3:49435233-49435252 | None:intergenic | 30.0% | |
| CAATGATACTGTTATTGCTT+TGG | + | chr1_3:49435231-49435250 | Msa0122630:CDS | 30.0% | |
| TGATGTACTTCAATTCTTGT+TGG | + | chr1_3:49435413-49435432 | Msa0122630:intron | 30.0% | |
| ! | GCTATTGTTATAGTACGTTT+TGG | + | chr1_3:49435494-49435513 | Msa0122630:intron | 30.0% |
| !! | TACGTTTTGGCATGTTATTA+AGG | + | chr1_3:49435507-49435526 | Msa0122630:intron | 30.0% |
| ! | ATGTTATTAAGGTGTGGTTT+TGG | + | chr1_3:49435518-49435537 | Msa0122630:intron | 30.0% |
| ! | TGTTATTAAGGTGTGGTTTT+GGG | + | chr1_3:49435519-49435538 | Msa0122630:intron | 30.0% |
| !!! | TTATTTTTTGCAGGAAAAGG+AGG | - | chr1_3:49435615-49435634 | None:intergenic | 30.0% |
| TTTATTTACTTGTCCTTTCC+AGG | + | chr1_3:49435758-49435777 | Msa0122630:intron | 30.0% | |
| GTATAAAACAAACCTCAATG+AGG | - | chr1_3:49435836-49435855 | None:intergenic | 30.0% | |
| TGTAAGATGAAAGCAATATC+AGG | - | chr1_3:49435922-49435941 | None:intergenic | 30.0% | |
| AAATGCAGTGAAGATAATGA+TGG | - | chr1_3:49436081-49436100 | None:intergenic | 30.0% | |
| TGATCATTGTGTTAGAAGAT+AGG | - | chr1_3:49436459-49436478 | None:intergenic | 30.0% | |
| TAACCAAAATTTACTTAGGG+TGG | + | chr1_3:49436554-49436573 | Msa0122630:CDS | 30.0% | |
| ! | ATACTTTACTAATGGATGGT+GGG | + | chr1_3:49436586-49436605 | Msa0122630:CDS | 30.0% |
| ATATAAATAGCGCACAACAT+TGG | + | chr1_3:49436655-49436674 | Msa0122630:intron | 30.0% | |
| TTCAAGACAGTTCAAAAAGA+GGG | - | chr1_3:49436957-49436976 | None:intergenic | 30.0% | |
| ATTCAAGACAGTTCAAAAAG+AGG | - | chr1_3:49436958-49436977 | None:intergenic | 30.0% | |
| CTGTCTTGAATTTATAAGCA+TGG | + | chr1_3:49436967-49436986 | Msa0122630:intron | 30.0% | |
| GTCTTGAATTTATAAGCATG+GGG | + | chr1_3:49436969-49436988 | Msa0122630:intron | 30.0% | |
| !!! | TCTTTTTTGTCCTCCTAATA+TGG | + | chr1_3:49437000-49437019 | Msa0122630:intron | 30.0% |
| ATAAACATGACCATATTAGG+AGG | - | chr1_3:49437013-49437032 | None:intergenic | 30.0% | |
| ! | ATATCTGTTTTCCTACTAAC+AGG | + | chr1_3:49437040-49437059 | Msa0122630:intron | 30.0% |
| ! | ACTATGGTTTTCTAGATGAA+CGG | - | chr1_3:49437203-49437222 | None:intergenic | 30.0% |
| CTAGTTAATAAACCTTCACT+AGG | + | chr1_3:49437262-49437281 | Msa0122630:three_prime_UTR | 30.0% | |
| AGTTAATAAACCTTCACTAG+GGG | + | chr1_3:49437264-49437283 | Msa0122630:three_prime_UTR | 30.0% | |
| ACAGATACAAATGATGTTCA+AGG | - | chr1_3:49437473-49437492 | None:intergenic | 30.0% | |
| !! | ATATCAGCCTTGTTATCTAA+AGG | + | chr1_3:49437555-49437574 | Msa0122630:three_prime_UTR | 30.0% |
| TGTGAGCTTAAGTGTATGTT+TGG | - | chr1_3:49430454-49430473 | None:intergenic | 35.0% | |
| AAACATACACTTAAGCTCAC+AGG | + | chr1_3:49430453-49430472 | Msa0122630:five_prime_UTR | 35.0% | |
| !! | ATTTTAACAAGCTGTAGGCT+AGG | + | chr1_3:49430490-49430509 | Msa0122630:five_prime_UTR | 35.0% |
| ! | AGGCTAGGAAATGGAATTTT+AGG | + | chr1_3:49430505-49430524 | Msa0122630:five_prime_UTR | 35.0% |
| ATTTCTCAGACTGTGTTCTA+GGG | - | chr1_3:49430629-49430648 | None:intergenic | 35.0% | |
| TTCCCCAAATTCAAAGTCAA+AGG | + | chr1_3:49430700-49430719 | Msa0122630:CDS | 35.0% | |
| AAAGTAACGAAAGAAGAGGA+AGG | - | chr1_3:49430934-49430953 | None:intergenic | 35.0% | |
| GAGTAAAGTAACGAAAGAAG+AGG | - | chr1_3:49430938-49430957 | None:intergenic | 35.0% | |
| AGTACTGTAAAAACTCAGGA+AGG | - | chr1_3:49431279-49431298 | None:intergenic | 35.0% | |
| ATAACACACCTTAAACACTC+TGG | + | chr1_3:49431436-49431455 | Msa0122630:intron | 35.0% | |
| TAACACACCTTAAACACTCT+GGG | + | chr1_3:49431437-49431456 | Msa0122630:intron | 35.0% | |
| !!! | GTTAGTTTTTTCTCCTTGAC+AGG | - | chr1_3:49431531-49431550 | None:intergenic | 35.0% |
| ! | GCACAATCTTTTCTATCATC+TGG | - | chr1_3:49432000-49432019 | None:intergenic | 35.0% |
| ! | CCAGGAGGTACATAAAATTA+GGG | - | chr1_3:49432022-49432041 | None:intergenic | 35.0% |
| GCCAAACATAGGTTAATCTA+TGG | + | chr1_3:49432041-49432060 | Msa0122630:intron | 35.0% | |
| CCCATAGATTAACCTATGTT+TGG | - | chr1_3:49432045-49432064 | None:intergenic | 35.0% | |
| !!! | TCTATGGGTCTATTTTTTGC+AGG | + | chr1_3:49432057-49432076 | Msa0122630:intron | 35.0% |
| !!! | CTATTTTTTGCAGGACAATG+TGG | + | chr1_3:49432066-49432085 | Msa0122630:intron | 35.0% |
| !! | CCACTATTGTTGTTTGCTAA+TGG | - | chr1_3:49432215-49432234 | None:intergenic | 35.0% |
| CCATTAGCAAACAACAATAG+TGG | + | chr1_3:49432212-49432231 | Msa0122630:intron | 35.0% | |
| AATTAGATACGTGCATATCG+GGG | + | chr1_3:49432456-49432475 | Msa0122630:intron | 35.0% | |
| AAAAACAGAGCTGAACATTC+TGG | - | chr1_3:49432680-49432699 | None:intergenic | 35.0% | |
| ! | TTTTGAACTTCTCAGATTCC+AGG | + | chr1_3:49432719-49432738 | Msa0122630:intron | 35.0% |
| TATGTGACCAGATTTCTTTC+AGG | + | chr1_3:49432915-49432934 | Msa0122630:intron | 35.0% | |
| ATGTGACCAGATTTCTTTCA+GGG | + | chr1_3:49432916-49432935 | Msa0122630:intron | 35.0% | |
| TTCCTATTTCATGTGCATGT+GGG | + | chr1_3:49433179-49433198 | Msa0122630:intron | 35.0% | |
| AAATAGTACATACCTTTGCG+AGG | - | chr1_3:49433407-49433426 | None:intergenic | 35.0% | |
| ! | TTTCAACATGGAGCACTATA+AGG | - | chr1_3:49433450-49433469 | None:intergenic | 35.0% |
| TTATAGTGCTCCATGTTGAA+AGG | + | chr1_3:49433449-49433468 | Msa0122630:intron | 35.0% | |
| TATAGTGCTCCATGTTGAAA+GGG | + | chr1_3:49433450-49433469 | Msa0122630:intron | 35.0% | |
| ATTGAATCCACTGGTGTAAT+TGG | + | chr1_3:49433540-49433559 | Msa0122630:CDS | 35.0% | |
| TTCACTAACTTCTTCAGATG+AGG | + | chr1_3:49433783-49433802 | Msa0122630:CDS | 35.0% | |
| TCACTAACTTCTTCAGATGA+GGG | + | chr1_3:49433784-49433803 | Msa0122630:CDS | 35.0% | |
| AAGCTTATTTGTCTGCATAC+AGG | + | chr1_3:49434043-49434062 | Msa0122630:intron | 35.0% | |
| AGCTTATTTGTCTGCATACA+GGG | + | chr1_3:49434044-49434063 | Msa0122630:intron | 35.0% | |
| GAGGATGAACAAGACATAAA+AGG | - | chr1_3:49434574-49434593 | None:intergenic | 35.0% | |
| GAAGAACTAAGGTCAGAATT+GGG | + | chr1_3:49434675-49434694 | Msa0122630:CDS | 35.0% | |
| AAGAACTAAGGTCAGAATTG+GGG | + | chr1_3:49434676-49434695 | Msa0122630:CDS | 35.0% | |
| TAGGTAATAACAACTGATGC+CGG | + | chr1_3:49434825-49434844 | Msa0122630:intron | 35.0% | |
| ! | ATTTTGCATCATCTTGCTTC+AGG | + | chr1_3:49435189-49435208 | Msa0122630:intron | 35.0% |
| TAAAGTTCTATGACCTATGC+TGG | + | chr1_3:49435470-49435489 | Msa0122630:intron | 35.0% | |
| TATAACAATAGCTCCAGCAT+AGG | - | chr1_3:49435486-49435505 | None:intergenic | 35.0% | |
| TTTGGCATGTTATTAAGGTG+TGG | + | chr1_3:49435512-49435531 | Msa0122630:intron | 35.0% | |
| !! | GTTATTAAGGTGTGGTTTTG+GGG | + | chr1_3:49435520-49435539 | Msa0122630:intron | 35.0% |
| GGAAAAAGAGGATGACAAAA+AGG | - | chr1_3:49435660-49435679 | None:intergenic | 35.0% | |
| GACAAGATCTAAGGAAAAAG+AGG | - | chr1_3:49435672-49435691 | None:intergenic | 35.0% | |
| AAATCACAGGACAAGATCTA+AGG | - | chr1_3:49435681-49435700 | None:intergenic | 35.0% | |
| TCTTGCCAAATCTATAGCTT+GGG | + | chr1_3:49435791-49435810 | Msa0122630:CDS | 35.0% | |
| TGAATTGATTAGTGAAAGCG+TGG | + | chr1_3:49436253-49436272 | Msa0122630:intron | 35.0% | |
| ! | GAATTGATTAGTGAAAGCGT+GGG | + | chr1_3:49436254-49436273 | Msa0122630:intron | 35.0% |
| TGCATCATCTTCACTTGTAA+AGG | + | chr1_3:49436388-49436407 | Msa0122630:intron | 35.0% | |
| TTGTGTTAGAAGATAGGACT+TGG | - | chr1_3:49436453-49436472 | None:intergenic | 35.0% | |
| CTTCTAACACAATGATCATC+AGG | + | chr1_3:49436461-49436480 | Msa0122630:intron | 35.0% | |
| ! | GTTCCACCCTAAGTAAATTT+TGG | - | chr1_3:49436560-49436579 | None:intergenic | 35.0% |
| AAATTTACTTAGGGTGGAAC+TGG | + | chr1_3:49436560-49436579 | Msa0122630:CDS | 35.0% | |
| AATTTACTTAGGGTGGAACT+GGG | + | chr1_3:49436561-49436580 | Msa0122630:CDS | 35.0% | |
| ! | GATACTTTACTAATGGATGG+TGG | + | chr1_3:49436585-49436604 | Msa0122630:CDS | 35.0% |
| ! | TACTTTACTAATGGATGGTG+GGG | + | chr1_3:49436587-49436606 | Msa0122630:CDS | 35.0% |
| TAAAGTTTACGAACTGTTGC+AGG | + | chr1_3:49436830-49436849 | Msa0122630:intron | 35.0% | |
| AAAGTTTACGAACTGTTGCA+GGG | + | chr1_3:49436831-49436850 | Msa0122630:intron | 35.0% | |
| GATTAACACGGGATACAAAA+TGG | - | chr1_3:49437303-49437322 | None:intergenic | 35.0% | |
| !! | AAAAGGGTTGGTGATTAACA+CGG | - | chr1_3:49437315-49437334 | None:intergenic | 35.0% |
| ACAAGACAAATGAAAAGGGT+TGG | - | chr1_3:49437327-49437346 | None:intergenic | 35.0% | |
| GCACACAAGACAAATGAAAA+GGG | - | chr1_3:49437331-49437350 | None:intergenic | 35.0% | |
| TGCACACAAGACAAATGAAA+AGG | - | chr1_3:49437332-49437351 | None:intergenic | 35.0% | |
| ATAAGCAGTTATTAAGCGCA+CGG | + | chr1_3:49437353-49437372 | Msa0122630:three_prime_UTR | 35.0% | |
| AGCTTCTAACAATGCCATAT+TGG | - | chr1_3:49437397-49437416 | None:intergenic | 35.0% | |
| GTTAGAAGCTACTGAAAATC+TGG | + | chr1_3:49437407-49437426 | Msa0122630:three_prime_UTR | 35.0% | |
| CCTATCTCCTTTAGATAACA+AGG | - | chr1_3:49437565-49437584 | None:intergenic | 35.0% | |
| ! | CCTTGTTATCTAAAGGAGAT+AGG | + | chr1_3:49437562-49437581 | Msa0122630:three_prime_UTR | 35.0% |
| CTAAAGGAGATAGGATCAAA+TGG | + | chr1_3:49437571-49437590 | Msa0122630:three_prime_UTR | 35.0% | |
| !! | CCAAGTTTAATTTGACACCA+AGG | - | chr1_3:49437599-49437618 | None:intergenic | 35.0% |
| !! | CCTTGGTGTCAAATTAAACT+TGG | + | chr1_3:49437596-49437615 | Msa0122630:three_prime_UTR | 35.0% |
| !! | ACAGTATGTTCTAGAGGTCA+GGG | - | chr1_3:49430347-49430366 | None:intergenic | 40.0% |
| !! | TACAGTATGTTCTAGAGGTC+AGG | - | chr1_3:49430348-49430367 | None:intergenic | 40.0% |
| CAAGCTACAGTATGTTCTAG+AGG | - | chr1_3:49430353-49430372 | None:intergenic | 40.0% | |
| !! | CTCTAGAACATACTGTAGCT+TGG | + | chr1_3:49430351-49430370 | Msa0122630:five_prime_UTR | 40.0% |
| CATTTCTCAGACTGTGTTCT+AGG | - | chr1_3:49430630-49430649 | None:intergenic | 40.0% | |
| AAATGGAGAGAAACGTTGTG+AGG | - | chr1_3:49430665-49430684 | None:intergenic | 40.0% | |
| TAGAAAATGACCTGCTTCCA+AGG | - | chr1_3:49430900-49430919 | None:intergenic | 40.0% | |
| ! | ACTAGTTTGAGCTAAGGGTT+AGG | + | chr1_3:49431481-49431500 | Msa0122630:intron | 40.0% |
| CTAGTTTGAGCTAAGGGTTA+GGG | + | chr1_3:49431482-49431501 | Msa0122630:intron | 40.0% | |
| TTGGACACAAGTGGTTAATG+TGG | + | chr1_3:49431932-49431951 | Msa0122630:intron | 40.0% | |
| ! | CCCTAATTTTATGTACCTCC+TGG | + | chr1_3:49432019-49432038 | Msa0122630:intron | 40.0% |
| ! | GCCAGGAGGTACATAAAATT+AGG | - | chr1_3:49432023-49432042 | None:intergenic | 40.0% |
| AGATTAACCTATGTTTGGCC+AGG | - | chr1_3:49432040-49432059 | None:intergenic | 40.0% | |
| AACACAACCAGTGTAGTCAA+TGG | + | chr1_3:49432175-49432194 | Msa0122630:intron | 40.0% | |
| !! | CGTTGTGCTGCACTTTTTAA+TGG | - | chr1_3:49432511-49432530 | None:intergenic | 40.0% |
| ! | TTAAAAAGTGCAGCACAACG+AGG | + | chr1_3:49432511-49432530 | Msa0122630:intron | 40.0% |
| TTCAAAGCTGCGGGAATATA+TGG | + | chr1_3:49432764-49432783 | Msa0122630:CDS | 40.0% | |
| TGAAAGCTAACCTGCAGATA+TGG | - | chr1_3:49432849-49432868 | None:intergenic | 40.0% | |
| GAATGACCCTGAAAGAAATC+TGG | - | chr1_3:49432925-49432944 | None:intergenic | 40.0% | |
| ! | GTGCTTTTGCAGTATAACAC+AGG | - | chr1_3:49432972-49432991 | None:intergenic | 40.0% |
| CAATGCATTCAGTACAAGCT+CGG | - | chr1_3:49433055-49433074 | None:intergenic | 40.0% | |
| CTTCCTATTTCATGTGCATG+TGG | + | chr1_3:49433178-49433197 | Msa0122630:intron | 40.0% | |
| ATAATCAGCATACTGTCTGC+TGG | + | chr1_3:49433211-49433230 | Msa0122630:intron | 40.0% | |
| GCTGGAGTTTAGATTTACTG+TGG | + | chr1_3:49433229-49433248 | Msa0122630:intron | 40.0% | |
| CCACACATTCTATCATATCG+CGG | - | chr1_3:49433380-49433399 | None:intergenic | 40.0% | |
| TTGCACAAACCCTTTCAACA+TGG | - | chr1_3:49433462-49433481 | None:intergenic | 40.0% | |
| TCTTTGACCAATTACACCAG+TGG | - | chr1_3:49433550-49433569 | None:intergenic | 40.0% | |
| ATCAGAGGATACAAGCACAT+AGG | - | chr1_3:49433617-49433636 | None:intergenic | 40.0% | |
| ! | TTTCTCAAGTGGCTTGTCAA+TGG | - | chr1_3:49433641-49433660 | None:intergenic | 40.0% |
| CACTAACTTCTTCAGATGAG+GGG | + | chr1_3:49433785-49433804 | Msa0122630:CDS | 40.0% | |
| CTTGCTAACAAGATCTGTTG+TGG | - | chr1_3:49434094-49434113 | None:intergenic | 40.0% | |
| AGATCTTGTTAGCAAGAGTG+TGG | + | chr1_3:49434098-49434117 | Msa0122630:CDS | 40.0% | |
| ATGAAACCAGCAAGCAAAGT+AGG | - | chr1_3:49434150-49434169 | None:intergenic | 40.0% | |
| CACACTTTGTATGGATAGGT+AGG | + | chr1_3:49434225-49434244 | Msa0122630:intron | 40.0% | |
| CAACAACTTGTACAAGTGAG+CGG | - | chr1_3:49434288-49434307 | None:intergenic | 40.0% | |
| GAAAAGACAAAACAACCCAG+TGG | + | chr1_3:49434312-49434331 | Msa0122630:intron | 40.0% | |
| CCATACATTACACAACCACT+GGG | - | chr1_3:49434330-49434349 | None:intergenic | 40.0% | |
| TCCATACATTACACAACCAC+TGG | - | chr1_3:49434331-49434350 | None:intergenic | 40.0% | |
| TAAACATCAACGACCTATGC+AGG | - | chr1_3:49434459-49434478 | None:intergenic | 40.0% | |
| CGAAAAAAAAAAGGCAAGGG+CGG | + | chr1_3:49434479-49434498 | Msa0122630:intron | 40.0% | |
| !! | TTCTTGGGTATTGGTTAGGT+TGG | + | chr1_3:49434653-49434672 | Msa0122630:intron | 40.0% |
| !! | TGGTTAGGTTGGAAGAACTA+AGG | + | chr1_3:49434664-49434683 | Msa0122630:intron | 40.0% |
| GGAAGAACTAAGGTCAGAAT+TGG | + | chr1_3:49434674-49434693 | Msa0122630:CDS | 40.0% | |
| AGAACTAAGGTCAGAATTGG+GGG | + | chr1_3:49434677-49434696 | Msa0122630:CDS | 40.0% | |
| TGGAATGATCCACCCAAATA+TGG | + | chr1_3:49434715-49434734 | Msa0122630:CDS | 40.0% | |
| TCTCTAACTAAATCCACGCT+AGG | + | chr1_3:49434806-49434825 | Msa0122630:intron | 40.0% | |
| ! | TCAGTTGTTATTACCTAGCG+TGG | - | chr1_3:49434822-49434841 | None:intergenic | 40.0% |
| AGGTAATAACAACTGATGCC+GGG | + | chr1_3:49434826-49434845 | Msa0122630:intron | 40.0% | |
| TTCAGTTAATGGCATAGTGG+TGG | + | chr1_3:49434949-49434968 | Msa0122630:intron | 40.0% | |
| ATCATCTTGCTTCAGGTAGA+TGG | + | chr1_3:49435196-49435215 | Msa0122630:intron | 40.0% | |
| TCATGTCTCAACGAAATCAC+AGG | - | chr1_3:49435694-49435713 | None:intergenic | 40.0% | |
| GTCTTGCCAAATCTATAGCT+TGG | + | chr1_3:49435790-49435809 | Msa0122630:CDS | 40.0% | |
| TCCATCCCAAGCTATAGATT+TGG | - | chr1_3:49435799-49435818 | None:intergenic | 40.0% | |
| TACAAAGTGAAGACGGAGTT+TGG | - | chr1_3:49436311-49436330 | None:intergenic | 40.0% | |
| AAACTCCGTCTTCACTTTGT+AGG | + | chr1_3:49436310-49436329 | Msa0122630:intron | 40.0% | |
| ACTGACCTACAAAGTGAAGA+CGG | - | chr1_3:49436318-49436337 | None:intergenic | 40.0% | |
| TATATGGTAGAGACCCCAAT+TGG | + | chr1_3:49436490-49436509 | Msa0122630:CDS | 40.0% | |
| ATATGGTAGAGACCCCAATT+GGG | + | chr1_3:49436491-49436510 | Msa0122630:CDS | 40.0% | |
| ATTTACTTAGGGTGGAACTG+GGG | + | chr1_3:49436562-49436581 | Msa0122630:CDS | 40.0% | |
| ACTGGGGGATACTTTACTAA+TGG | + | chr1_3:49436578-49436597 | Msa0122630:CDS | 40.0% | |
| GGGGATACTTTACTAATGGA+TGG | + | chr1_3:49436582-49436601 | Msa0122630:CDS | 40.0% | |
| ! | TTGTCTAATGAATTGGTGGC+TGG | + | chr1_3:49436709-49436728 | Msa0122630:intron | 40.0% |
| GATAGACGGACAATAGCATA+AGG | - | chr1_3:49436803-49436822 | None:intergenic | 40.0% | |
| AAGTTTACGAACTGTTGCAG+GGG | + | chr1_3:49436832-49436851 | Msa0122630:intron | 40.0% | |
| GGCTAGTAGTTATCTGAGAA+AGG | + | chr1_3:49436858-49436877 | Msa0122630:CDS | 40.0% | |
| AGTAGTTATCTGAGAAAGGC+TGG | + | chr1_3:49436862-49436881 | Msa0122630:CDS | 40.0% | |
| GTAGTTATCTGAGAAAGGCT+GGG | + | chr1_3:49436863-49436882 | Msa0122630:CDS | 40.0% | |
| TAGTTATCTGAGAAAGGCTG+GGG | + | chr1_3:49436864-49436883 | Msa0122630:CDS | 40.0% | |
| ! | GTTTTCCTACTAACAGGCAA+TGG | + | chr1_3:49437046-49437065 | Msa0122630:intron | 40.0% |
| CAGTACGCGTCATATTCATT+TGG | - | chr1_3:49437148-49437167 | None:intergenic | 40.0% | |
| !! | AAAGGGTTGGTGATTAACAC+GGG | - | chr1_3:49437314-49437333 | None:intergenic | 40.0% |
| ATATCGTACACGTGCCAATA+TGG | + | chr1_3:49437380-49437399 | Msa0122630:three_prime_UTR | 40.0% | |
| GAAGCTACTGAAAATCTGGT+TGG | + | chr1_3:49437411-49437430 | Msa0122630:three_prime_UTR | 40.0% | |
| ACAAGCTGTAGGCTAGGAAA+TGG | + | chr1_3:49430496-49430515 | Msa0122630:five_prime_UTR | 45.0% | |
| GATTCACGCTGTATCCACTA+CGG | + | chr1_3:49430821-49430840 | Msa0122630:CDS | 45.0% | |
| AGAAGCTTGATTCTCCGTAG+TGG | - | chr1_3:49430838-49430857 | None:intergenic | 45.0% | |
| ! | GCTGACTTAGCTTCAGATTG+AGG | - | chr1_3:49431334-49431353 | None:intergenic | 45.0% |
| AGCTCTTAGACAGACACCTT+TGG | + | chr1_3:49431374-49431393 | Msa0122630:intron | 45.0% | |
| GCTCTTAGACAGACACCTTT+GGG | + | chr1_3:49431375-49431394 | Msa0122630:intron | 45.0% | |
| !! | AGACAGACACCTTTGGGATT+AGG | + | chr1_3:49431381-49431400 | Msa0122630:intron | 45.0% |
| ATACACACGCCTAATCCCAA+AGG | - | chr1_3:49431393-49431412 | None:intergenic | 45.0% | |
| ACACCTTAAACACTCTGGGT+GGG | + | chr1_3:49431441-49431460 | Msa0122630:intron | 45.0% | |
| ! | TTAAACACTCTGGGTGGGTT+GGG | + | chr1_3:49431446-49431465 | Msa0122630:intron | 45.0% |
| TGAGCTAAGGGTTAGGGATT+TGG | + | chr1_3:49431488-49431507 | Msa0122630:intron | 45.0% | |
| TCAACGTGTTTGTGTCGTGT+CGG | + | chr1_3:49431798-49431817 | Msa0122630:intron | 45.0% | |
| GTCGGATGTTTGTGCTTCAT+AGG | + | chr1_3:49431816-49431835 | Msa0122630:intron | 45.0% | |
| TTAACCTATGTTTGGCCAGG+AGG | - | chr1_3:49432037-49432056 | None:intergenic | 45.0% | |
| ACAACCAGTGTAGTCAATGG+TGG | + | chr1_3:49432178-49432197 | Msa0122630:intron | 45.0% | |
| ! | CTATCCACCATTGACTACAC+TGG | - | chr1_3:49432185-49432204 | None:intergenic | 45.0% |
| !! | GTGTAGTCAATGGTGGATAG+TGG | + | chr1_3:49432185-49432204 | Msa0122630:intron | 45.0% |
| ! | AGCACAACGAGGTTTTGCAT+GGG | + | chr1_3:49432522-49432541 | Msa0122630:intron | 45.0% |
| GTCAATAGCAGCCACTATAG+TGG | - | chr1_3:49432576-49432595 | None:intergenic | 45.0% | |
| TGAACTTCTCAGATTCCAGG+TGG | + | chr1_3:49432722-49432741 | Msa0122630:intron | 45.0% | |
| AAAGCTGCGGGAATATATGG+AGG | + | chr1_3:49432767-49432786 | Msa0122630:CDS | 45.0% | |
| AAGCTGCGGGAATATATGGA+GGG | + | chr1_3:49432768-49432787 | Msa0122630:CDS | 45.0% | |
| CATGTGACAAGTGCAAGATC+AGG | - | chr1_3:49432815-49432834 | None:intergenic | 45.0% | |
| GATGTTGATGCCATATCTGC+AGG | + | chr1_3:49432836-49432855 | Msa0122630:CDS | 45.0% | |
| AGGGTCATTCACGACTAATG+TGG | + | chr1_3:49432935-49432954 | Msa0122630:intron | 45.0% | |
| CGTGCTGTGTTAACTAATGC+AGG | + | chr1_3:49433120-49433139 | Msa0122630:CDS | 45.0% | |
| AGGTCAAGCAAATGCAGCTA+CGG | + | chr1_3:49433140-49433159 | Msa0122630:CDS | 45.0% | |
| AGCCCACATGCACATGAAAT+AGG | - | chr1_3:49433184-49433203 | None:intergenic | 45.0% | |
| TTGGGTCCTTTCTTATCTCC+AGG | + | chr1_3:49433341-49433360 | Msa0122630:intron | 45.0% | |
| TGGGTCCTTTCTTATCTCCA+GGG | + | chr1_3:49433342-49433361 | Msa0122630:intron | 45.0% | |
| CTTCACCCTGGAGATAAGAA+AGG | - | chr1_3:49433350-49433369 | None:intergenic | 45.0% | |
| CCGCGATATGATAGAATGTG+TGG | + | chr1_3:49433377-49433396 | Msa0122630:CDS | 45.0% | |
| ! | TGGCTTGTCAATGGAATCAG+AGG | - | chr1_3:49433632-49433651 | None:intergenic | 45.0% |
| GAGTGTGGCAATTGAGTCTT+TGG | + | chr1_3:49434113-49434132 | Msa0122630:CDS | 45.0% | |
| CTTCTTCCTACTTTGCTTGC+TGG | + | chr1_3:49434141-49434160 | Msa0122630:intron | 45.0% | |
| CCCAGTGGTTGTGTAATGTA+TGG | + | chr1_3:49434327-49434346 | Msa0122630:intron | 45.0% | |
| CAATTCAAGACGACCTGCAT+AGG | + | chr1_3:49434443-49434462 | Msa0122630:intron | 45.0% | |
| GGGCGGATAGTTGAATCAAT+TGG | + | chr1_3:49434496-49434515 | Msa0122630:intron | 45.0% | |
| TAAGGTCAGAATTGGGGGAA+TGG | + | chr1_3:49434682-49434701 | Msa0122630:CDS | 45.0% | |
| AGAATTGGGGGAATGGCAAA+AGG | + | chr1_3:49434689-49434708 | Msa0122630:CDS | 45.0% | |
| CGAGCATGGTAGCCATATTT+GGG | - | chr1_3:49434730-49434749 | None:intergenic | 45.0% | |
| CCAAATATGGCTACCATGCT+CGG | + | chr1_3:49434728-49434747 | Msa0122630:CDS | 45.0% | |
| CAAATATGGCTACCATGCTC+GGG | + | chr1_3:49434729-49434748 | Msa0122630:CDS | 45.0% | |
| AAATATGGCTACCATGCTCG+GGG | + | chr1_3:49434730-49434749 | Msa0122630:CDS | 45.0% | |
| GGTAATAACAACTGATGCCG+GGG | + | chr1_3:49434827-49434846 | Msa0122630:intron | 45.0% | |
| CATCTTTCTCCAAACGTCAC+TGG | - | chr1_3:49434856-49434875 | None:intergenic | 45.0% | |
| CAGTGACGTTTGGAGAAAGA+TGG | + | chr1_3:49434854-49434873 | Msa0122630:CDS | 45.0% | |
| CGTTTGGAGAAAGATGGTTC+AGG | + | chr1_3:49434860-49434879 | Msa0122630:CDS | 45.0% | |
| CATCACATTGCACAAGCGAA+TGG | - | chr1_3:49435112-49435131 | None:intergenic | 45.0% | |
| ACTGTTATTGCTTTGGCCAG+TGG | + | chr1_3:49435238-49435257 | Msa0122630:CDS | 45.0% | |
| CTGTTATTGCTTTGGCCAGT+GGG | + | chr1_3:49435239-49435258 | Msa0122630:CDS | 45.0% | |
| TTCTTCTCTAGACAGCGATG+AGG | + | chr1_3:49435282-49435301 | Msa0122630:CDS | 45.0% | |
| CGATGAGGCAATTCAACTTC+AGG | + | chr1_3:49435297-49435316 | Msa0122630:CDS | 45.0% | |
| AAAAGCTCACAACTGCATGC+TGG | - | chr1_3:49435546-49435565 | None:intergenic | 45.0% | |
| TGTCCTTTCCAGGTAATGCA+AGG | + | chr1_3:49435768-49435787 | Msa0122630:intron | 45.0% | |
| AGACCTTGCATTACCTGGAA+AGG | - | chr1_3:49435774-49435793 | None:intergenic | 45.0% | |
| GCCAAATCTATAGCTTGGGA+TGG | + | chr1_3:49435795-49435814 | Msa0122630:CDS | 45.0% | |
| TCTATAGCTTGGGATGGAGA+AGG | + | chr1_3:49435801-49435820 | Msa0122630:CDS | 45.0% | |
| ACGTGGAGGATTACTATTGC+AGG | - | chr1_3:49435858-49435877 | None:intergenic | 45.0% | |
| TAGTAATCCTCCACGTTCCT+TGG | + | chr1_3:49435862-49435881 | Msa0122630:intron | 45.0% | |
| AGTAATCCTCCACGTTCCTT+GGG | + | chr1_3:49435863-49435882 | Msa0122630:intron | 45.0% | |
| ACTTTGTAGGTCAGTGTGAC+TGG | + | chr1_3:49436323-49436342 | Msa0122630:intron | 45.0% | |
| TGTGACTGGTGCAAATAGTG+AGG | + | chr1_3:49436337-49436356 | Msa0122630:CDS | 45.0% | |
| GATCATCAGGCTGCTGTATA+TGG | + | chr1_3:49436474-49436493 | Msa0122630:intron | 45.0% | |
| TATGGTAGAGACCCCAATTG+GGG | + | chr1_3:49436492-49436511 | Msa0122630:CDS | 45.0% | |
| TTTACTTAGGGTGGAACTGG+GGG | + | chr1_3:49436563-49436582 | Msa0122630:CDS | 45.0% | |
| TCTTACCGGTCAAACGATTG+TGG | - | chr1_3:49436615-49436634 | None:intergenic | 45.0% | |
| AGGGAAAACCAGTGAACTGT+GGG | - | chr1_3:49436938-49436957 | None:intergenic | 45.0% | |
| GATAGGATCAAATGGCACCT+TGG | + | chr1_3:49437579-49437598 | Msa0122630:three_prime_UTR | 45.0% | |
| GAGGTCAGGGAAGCAAGATT+GGG | - | chr1_3:49430334-49430353 | None:intergenic | 50.0% | |
| AGAGGTCAGGGAAGCAAGAT+TGG | - | chr1_3:49430335-49430354 | None:intergenic | 50.0% | |
| AACTGGCTGAAACTCGCGTT+TGG | + | chr1_3:49430411-49430430 | Msa0122630:five_prime_UTR | 50.0% | |
| ACTGGCTGAAACTCGCGTTT+GGG | + | chr1_3:49430412-49430431 | Msa0122630:five_prime_UTR | 50.0% | |
| !! | CTCAGACTGTGTTCTAGGGT+TGG | - | chr1_3:49430625-49430644 | None:intergenic | 50.0% |
| CGTGAAGCAAACATCTGCAG+AGG | - | chr1_3:49430792-49430811 | None:intergenic | 50.0% | |
| GGACCTTGGGGAAGGAAAAT+GGG | - | chr1_3:49430879-49430898 | None:intergenic | 50.0% | |
| AGGACCTTGGGGAAGGAAAA+TGG | - | chr1_3:49430880-49430899 | None:intergenic | 50.0% | |
| ! | TTTTCCTTCCCCAAGGTCCT+TGG | + | chr1_3:49430880-49430899 | Msa0122630:CDS | 50.0% |
| CACACCTTAAACACTCTGGG+TGG | + | chr1_3:49431440-49431459 | Msa0122630:intron | 50.0% | |
| ! | CAACCCACCCAGAGTGTTTA+AGG | - | chr1_3:49431447-49431466 | None:intergenic | 50.0% |
| CTTAAACACTCTGGGTGGGT+TGG | + | chr1_3:49431445-49431464 | Msa0122630:intron | 50.0% | |
| GCTAAGGGTTAGGGATTTGG+AGG | + | chr1_3:49431491-49431510 | Msa0122630:intron | 50.0% | |
| GTTAGGGATTTGGAGGTCCA+GGG | + | chr1_3:49431498-49431517 | Msa0122630:intron | 50.0% | |
| ! | ACGTGTCTGTGGAGTGTCTA+AGG | - | chr1_3:49431595-49431614 | None:intergenic | 50.0% |
| ! | ATGTGTCTGAGACGTGTCTG+TGG | - | chr1_3:49431606-49431625 | None:intergenic | 50.0% |
| TGTACCTCCTGGCCAAACAT+AGG | + | chr1_3:49432030-49432049 | Msa0122630:intron | 50.0% | |
| ! | CAGCACAACGAGGTTTTGCA+TGG | + | chr1_3:49432521-49432540 | Msa0122630:intron | 50.0% |
| ! | AGGTTTTGCATGGGAGCCTA+TGG | + | chr1_3:49432531-49432550 | Msa0122630:intron | 50.0% |
| ! | GGTTTTGCATGGGAGCCTAT+GGG | + | chr1_3:49432532-49432551 | Msa0122630:intron | 50.0% |
| TGCAGAGGGTTTCAAAGCTG+CGG | + | chr1_3:49432754-49432773 | Msa0122630:CDS | 50.0% | |
| CAAGCAAATGCAGCTACGGT+AGG | + | chr1_3:49433144-49433163 | Msa0122630:intron | 50.0% | |
| TCTTATCTCCAGGGTGAAGC+AGG | + | chr1_3:49433351-49433370 | Msa0122630:intron | 50.0% | |
| ATGTGTGGAAAGCCTCGCAA+AGG | + | chr1_3:49433392-49433411 | Msa0122630:CDS | 50.0% | |
| GATAGGTAGGTGTAGTCCTG+TGG | + | chr1_3:49434238-49434257 | Msa0122630:intron | 50.0% | |
| GCATGGTAGCCATATTTGGG+TGG | - | chr1_3:49434727-49434746 | None:intergenic | 50.0% | |
| CCGAGCATGGTAGCCATATT+TGG | - | chr1_3:49434731-49434750 | None:intergenic | 50.0% | |
| AGTAAGACATACCCCGAGCA+TGG | - | chr1_3:49434744-49434763 | None:intergenic | 50.0% | |
| ACTTCAGGCATGCCTAGATG+CGG | + | chr1_3:49435312-49435331 | Msa0122630:CDS | 50.0% | |
| GGGTTGACATTACCGCATCT+AGG | - | chr1_3:49435327-49435346 | None:intergenic | 50.0% | |
| TGGCAAGACCTTGCATTACC+TGG | - | chr1_3:49435779-49435798 | None:intergenic | 50.0% | |
| TCAGTCATGATTCGTGCCCA+AGG | - | chr1_3:49435882-49435901 | None:intergenic | 50.0% | |
| TCTCTCTCTCTCTCTCTCTG+TGG | + | chr1_3:49436156-49436175 | Msa0122630:intron | 50.0% | |
| TAGTGAGGCTGAAGCTGCAA+AGG | + | chr1_3:49436352-49436371 | Msa0122630:CDS | 50.0% | |
| GGGAACCACAATCGTTTGAC+CGG | + | chr1_3:49436607-49436626 | Msa0122630:CDS | 50.0% | |
| GTCTGTAACCCACAGTTCAC+TGG | + | chr1_3:49436927-49436946 | Msa0122630:intron | 50.0% | |
| GAGGGAAAACCAGTGAACTG+TGG | - | chr1_3:49436939-49436958 | None:intergenic | 50.0% | |
| CCTACTAACAGGCAATGGAC+CGG | + | chr1_3:49437051-49437070 | Msa0122630:intron | 50.0% | |
| CTACTAACAGGCAATGGACC+GGG | + | chr1_3:49437052-49437071 | Msa0122630:intron | 50.0% | |
| AACAGAAACGCCCCTAGTGA+AGG | - | chr1_3:49437277-49437296 | None:intergenic | 50.0% | |
| TATCTGTGCTCACTGCACCT+AGG | + | chr1_3:49437486-49437505 | Msa0122630:three_prime_UTR | 50.0% | |
| CTGGCTGAAACTCGCGTTTG+GGG | + | chr1_3:49430413-49430432 | Msa0122630:five_prime_UTR | 55.0% | |
| GGAAGGAAAATGGGAGCAGC+AGG | - | chr1_3:49430870-49430889 | None:intergenic | 55.0% | |
| ! | GCTCCCATTTTCCTTCCCCA+AGG | + | chr1_3:49430873-49430892 | Msa0122630:CDS | 55.0% |
| ACCTGCTTCCAAGGACCTTG+GGG | - | chr1_3:49430891-49430910 | None:intergenic | 55.0% | |
| GACCTGCTTCCAAGGACCTT+GGG | - | chr1_3:49430892-49430911 | None:intergenic | 55.0% | |
| TGACCTGCTTCCAAGGACCT+TGG | - | chr1_3:49430893-49430912 | None:intergenic | 55.0% | |
| GGTTAGGGATTTGGAGGTCC+AGG | + | chr1_3:49431497-49431516 | Msa0122630:intron | 55.0% | |
| CCTTGACAGGACTTGAACCC+TGG | - | chr1_3:49431518-49431537 | None:intergenic | 55.0% | |
| CCAGGGTTCAAGTCCTGTCA+AGG | + | chr1_3:49431515-49431534 | Msa0122630:intron | 55.0% | |
| TGCACAGCATAGCAGCCCAT+AGG | - | chr1_3:49432550-49432569 | None:intergenic | 55.0% | |
| GCTGTGCAACGCCACTATAG+TGG | + | chr1_3:49432562-49432581 | Msa0122630:intron | 55.0% | |
| TCTGCAGCAGTAACTCCACC+TGG | - | chr1_3:49432740-49432759 | None:intergenic | 55.0% | |
| AGGTGGAGTTACTGCTGCAG+AGG | + | chr1_3:49432739-49432758 | Msa0122630:CDS | 55.0% | |
| GGTGGAGTTACTGCTGCAGA+GGG | + | chr1_3:49432740-49432759 | Msa0122630:CDS | 55.0% | |
| GCAGAGGGTTTCAAAGCTGC+GGG | + | chr1_3:49432755-49432774 | Msa0122630:CDS | 55.0% | |
| GGGGGAATGGCAAAAGGTTC+TGG | + | chr1_3:49434695-49434714 | Msa0122630:CDS | 55.0% | |
| ! | CCAAACGTCACTGGTTACCC+CGG | - | chr1_3:49434847-49434866 | None:intergenic | 55.0% |
| TGATTCGTGCCCAAGGAACG+TGG | - | chr1_3:49435875-49435894 | None:intergenic | 55.0% | |
| CAGCAATGCGTCCCCAATTG+GGG | - | chr1_3:49436506-49436525 | None:intergenic | 55.0% | |
| GCAGCAATGCGTCCCCAATT+GGG | - | chr1_3:49436507-49436526 | None:intergenic | 55.0% | |
| AGCAGCAATGCGTCCCCAAT+TGG | - | chr1_3:49436508-49436527 | None:intergenic | 55.0% | |
| TGCTGCTGCAGCTGGTTACT+CGG | + | chr1_3:49436521-49436540 | Msa0122630:CDS | 55.0% | |
| TACGAACTGTTGCAGGGGTG+AGG | + | chr1_3:49436837-49436856 | Msa0122630:intron | 55.0% | |
| AGAAAGGCTGGGGAGACTCA+CGG | + | chr1_3:49436874-49436893 | Msa0122630:CDS | 55.0% | |
| CCGGTCCATTGCCTGTTAGT+AGG | - | chr1_3:49437054-49437073 | None:intergenic | 55.0% | |
| GCACCTAGGAATGCTGTCAG+AGG | + | chr1_3:49437500-49437519 | Msa0122630:three_prime_UTR | 55.0% | |
| CTGCCTCTGACAGCATTCCT+AGG | - | chr1_3:49437506-49437525 | None:intergenic | 55.0% | |
| AGGAATGCTGTCAGAGGCAG+AGG | + | chr1_3:49437506-49437525 | Msa0122630:three_prime_UTR | 55.0% | |
| GCTTCCAAGGACCTTGGGGA+AGG | - | chr1_3:49430887-49430906 | None:intergenic | 60.0% | |
| TCCCCAAGGTCCTTGGAAGC+AGG | + | chr1_3:49430887-49430906 | Msa0122630:CDS | 60.0% | |
| TATGGAGGGTTGCGCGCTGT+AGG | + | chr1_3:49432782-49432801 | Msa0122630:CDS | 60.0% | |
| CAGGGCAGATTCTGCAGCAG+TGG | + | chr1_3:49434062-49434081 | Msa0122630:intron | 60.0% | |
| CCGGGGTAACCAGTGACGTT+TGG | + | chr1_3:49434844-49434863 | Msa0122630:CDS | 60.0% | |
| !! | CTTTGGCCAGTGGGCTGTCT+GGG | + | chr1_3:49435248-49435267 | Msa0122630:CDS | 60.0% |
| AGGAGCGACGTGCCTCATTG+AGG | + | chr1_3:49435821-49435840 | Msa0122630:CDS | 60.0% | |
| TTCGTGCCCAAGGAACGTGG+AGG | - | chr1_3:49435872-49435891 | None:intergenic | 60.0% | |
| GCTGCTGCAGCTGGTTACTC+GGG | + | chr1_3:49436522-49436541 | Msa0122630:CDS | 60.0% | |
| CTGCTGCAGCTGGTTACTCG+GGG | + | chr1_3:49436523-49436542 | Msa0122630:CDS | 60.0% | |
| TGCTGCAGCTGGTTACTCGG+GGG | + | chr1_3:49436524-49436543 | Msa0122630:CDS | 60.0% | |
| ACCGGGCCATGGACAAGCAT+GGG | + | chr1_3:49437069-49437088 | Msa0122630:CDS | 60.0% | |
| CACAGCCCCATGCTTGTCCA+TGG | - | chr1_3:49437078-49437097 | None:intergenic | 60.0% | |
| CTGGGGTCAAACTCGCGCAG+CGG | - | chr1_3:49431981-49432000 | None:intergenic | 65.0% | |
| CGCGGTAACCTGCTTCACCC+TGG | - | chr1_3:49433362-49433381 | None:intergenic | 65.0% | |
| !! | GCTTTGGCCAGTGGGCTGTC+TGG | + | chr1_3:49435247-49435266 | Msa0122630:CDS | 65.0% |
| GGACGCATTGCTGCTGCAGC+TGG | + | chr1_3:49436513-49436532 | Msa0122630:CDS | 65.0% | |
| ACAGGCAATGGACCGGGCCA+TGG | + | chr1_3:49437058-49437077 | Msa0122630:intron | 65.0% | |
| GACCGGGCCATGGACAAGCA+TGG | + | chr1_3:49437068-49437087 | Msa0122630:CDS | 65.0% | |
| CCCCATGCTTGTCCATGGCC+CGG | - | chr1_3:49437073-49437092 | None:intergenic | 65.0% | |
| CCGGGCCATGGACAAGCATG+GGG | + | chr1_3:49437070-49437089 | Msa0122630:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 49430276 | 49437655 | 49430276 | ID=Msa0122630;Name=Msa0122630 |
| chr1_3 | mRNA | 49430276 | 49437655 | 49430276 | ID=Msa0122630-mRNA-1;Parent=Msa0122630;Name=Msa0122630-mRNA-1;_AED=0.07;_eAED=0.07;_QI=371|0.93|0.94|1|1|1|17|511|467 |
| chr1_3 | exon | 49430276 | 49430721 | 49430276 | ID=Msa0122630-mRNA-1:exon:14959;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49430798 | 49430908 | 49430798 | ID=Msa0122630-mRNA-1:exon:14960;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49432734 | 49432857 | 49432734 | ID=Msa0122630-mRNA-1:exon:14961;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49432937 | 49433010 | 49432937 | ID=Msa0122630-mRNA-1:exon:14962;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49433117 | 49433161 | 49433117 | ID=Msa0122630-mRNA-1:exon:14963;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49433363 | 49433413 | 49433363 | ID=Msa0122630-mRNA-1:exon:14964;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49433510 | 49433578 | 49433510 | ID=Msa0122630-mRNA-1:exon:14965;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49433748 | 49433806 | 49433748 | ID=Msa0122630-mRNA-1:exon:14966;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49434065 | 49434134 | 49434065 | ID=Msa0122630-mRNA-1:exon:14967;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49434671 | 49434751 | 49434671 | ID=Msa0122630-mRNA-1:exon:14968;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49434828 | 49434914 | 49434828 | ID=Msa0122630-mRNA-1:exon:14969;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49435211 | 49435333 | 49435211 | ID=Msa0122630-mRNA-1:exon:14970;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49435780 | 49435842 | 49435780 | ID=Msa0122630-mRNA-1:exon:14971;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49436332 | 49436403 | 49436332 | ID=Msa0122630-mRNA-1:exon:14972;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49436483 | 49436628 | 49436483 | ID=Msa0122630-mRNA-1:exon:14973;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49436852 | 49436922 | 49436852 | ID=Msa0122630-mRNA-1:exon:14974;Parent=Msa0122630-mRNA-1 |
| chr1_3 | exon | 49437062 | 49437655 | 49437062 | ID=Msa0122630-mRNA-1:exon:14975;Parent=Msa0122630-mRNA-1 |
| chr1_3 | five_prime_UTR | 49430276 | 49430646 | 49430276 | ID=Msa0122630-mRNA-1:five_prime_utr;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49430647 | 49430721 | 49430647 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49430798 | 49430908 | 49430798 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49432734 | 49432857 | 49432734 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49432937 | 49433010 | 49432937 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49433117 | 49433161 | 49433117 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49433363 | 49433413 | 49433363 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49433510 | 49433578 | 49433510 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49433748 | 49433806 | 49433748 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49434065 | 49434134 | 49434065 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49434671 | 49434751 | 49434671 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49434828 | 49434914 | 49434828 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49435211 | 49435333 | 49435211 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49435780 | 49435842 | 49435780 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49436332 | 49436403 | 49436332 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49436483 | 49436628 | 49436483 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49436852 | 49436922 | 49436852 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | CDS | 49437062 | 49437144 | 49437062 | ID=Msa0122630-mRNA-1:cds;Parent=Msa0122630-mRNA-1 |
| chr1_3 | three_prime_UTR | 49437145 | 49437655 | 49437145 | ID=Msa0122630-mRNA-1:three_prime_utr;Parent=Msa0122630-mRNA-1 |
| Gene Sequence |
| Protein sequence |
