Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452930 | sp|Q5XET5|HESO1_ARATH | 45.010 | 511 | 240 | 7 | 1 | 473 | 1 | 508 | 1.12e-137 | 409 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452930 | A0A072UY73 | 95.825 | 479 | 20 | 0 | 1 | 479 | 1 | 479 | 0.0 | 949 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008110 | Msa1452930 | 0.813908 | 2.017353e-51 | -8.615850e-47 |
| Msa0095900 | Msa1452930 | 0.800662 | 1.297393e-48 | -8.615850e-47 |
| Msa1367370 | Msa1452930 | 0.817818 | 2.706669e-52 | -8.615850e-47 |
| Msa1369550 | Msa1452930 | 0.817166 | 3.796886e-52 | -8.615850e-47 |
| Msa1422420 | Msa1452930 | 0.841094 | 5.851263e-58 | -8.615850e-47 |
| Msa1443110 | Msa1452930 | 0.813632 | 2.320178e-51 | -8.615850e-47 |
| Msa0602880 | Msa1452930 | 0.812225 | 4.718621e-51 | -8.615850e-47 |
| Msa0639430 | Msa1452930 | 0.814449 | 1.531840e-51 | -8.615850e-47 |
| Msa0689520 | Msa1452930 | 0.824645 | 7.216556e-54 | -8.615850e-47 |
| Msa0691980 | Msa1452930 | 0.806286 | 8.855655e-50 | -8.615850e-47 |
| Msa0754520 | Msa1452930 | 0.803987 | 2.681209e-49 | -8.615850e-47 |
| Msa0122630 | Msa1452930 | 0.815225 | 1.030927e-51 | -8.615850e-47 |
| Msa0149370 | Msa1452930 | 0.806944 | 6.432332e-50 | -8.615850e-47 |
| Msa0225460 | Msa1452930 | 0.845609 | 3.649052e-59 | -8.615850e-47 |
| Msa0225680 | Msa1452930 | 0.857353 | 1.729887e-62 | -8.615850e-47 |
| Msa1269480 | Msa1452930 | 0.843074 | 1.751965e-58 | -8.615850e-47 |
| Msa0379770 | Msa1452930 | 0.805399 | 1.360385e-49 | -8.615850e-47 |
| Msa0428150 | Msa1452930 | 0.840079 | 1.078944e-57 | -8.615850e-47 |
| Msa0462500 | Msa1452930 | 0.848193 | 7.165341e-60 | -8.615850e-47 |
| Msa0480220 | Msa1452930 | 0.987189 | 2.279737e-169 | -8.615850e-47 |
| Msa1037640 | Msa1452930 | 0.805467 | 1.316287e-49 | -8.615850e-47 |
| Msa0292400 | Msa1452930 | 0.803513 | 3.362689e-49 | -8.615850e-47 |
| Msa0314340 | Msa1452930 | 0.809580 | 1.763721e-50 | -8.615850e-47 |
| Msa0349710 | Msa1452930 | 0.804133 | 2.500330e-49 | -8.615850e-47 |
| Msa1182860 | Msa1452930 | 0.807109 | 5.934587e-50 | -8.615850e-47 |
| Msa1223470 | Msa1452930 | 0.827031 | 1.957886e-54 | -8.615850e-47 |
| Msa0508150 | Msa1452930 | 0.893149 | 8.223460e-75 | -8.615850e-47 |
| Msa0524190 | Msa1452930 | 0.813250 | 2.814526e-51 | -8.615850e-47 |
| Msa0538470 | Msa1452930 | 0.800738 | 1.252129e-48 | -8.615850e-47 |
| Msa0547900 | Msa1452930 | 0.807966 | 3.904914e-50 | -8.615850e-47 |
| Msa0569200 | Msa1452930 | 0.800216 | 1.599177e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452930 | MtrunA17_Chr3g0112301 | 95.825 | 479 | 20 | 0 | 1 | 479 | 1 | 479 | 0.0 | 949 |
| Msa1452930 | MtrunA17_Chr3g0130901 | 31.420 | 331 | 195 | 9 | 7 | 331 | 46 | 350 | 2.30e-39 | 150 |
| Msa1452930 | MtrunA17_Chr8g0351151 | 25.448 | 279 | 177 | 5 | 53 | 324 | 368 | 622 | 9.78e-21 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1452930 | AT2G39740.3 | 45.010 | 511 | 240 | 7 | 1 | 473 | 1 | 508 | 1.13e-138 | 409 |
| Msa1452930 | AT2G39740.2 | 45.010 | 511 | 240 | 7 | 1 | 473 | 1 | 508 | 1.13e-138 | 409 |
| Msa1452930 | AT2G39740.1 | 45.010 | 511 | 240 | 7 | 1 | 473 | 1 | 508 | 1.13e-138 | 409 |
| Msa1452930 | AT3G45750.1 | 31.627 | 332 | 191 | 11 | 1 | 320 | 35 | 342 | 8.05e-35 | 138 |
| Msa1452930 | AT3G45750.4 | 33.213 | 277 | 158 | 8 | 49 | 320 | 13 | 267 | 8.95e-32 | 129 |
| Msa1452930 | AT3G45750.3 | 33.213 | 277 | 158 | 8 | 49 | 320 | 13 | 267 | 8.95e-32 | 129 |
| Msa1452930 | AT3G45750.5 | 33.213 | 277 | 158 | 8 | 49 | 320 | 8 | 262 | 9.74e-32 | 129 |
| Msa1452930 | AT3G45750.2 | 29.831 | 295 | 152 | 8 | 59 | 320 | 2 | 274 | 3.01e-25 | 109 |
| Msa1452930 | AT3G45760.1 | 34.184 | 196 | 117 | 4 | 20 | 207 | 56 | 247 | 6.94e-25 | 107 |
| Msa1452930 | AT2G45620.1 | 26.480 | 321 | 197 | 11 | 14 | 324 | 441 | 732 | 1.02e-22 | 102 |
| Msa1452930 | AT3G45760.2 | 31.754 | 211 | 117 | 5 | 20 | 207 | 56 | 262 | 1.84e-21 | 97.1 |
Find 156 sgRNAs with CRISPR-Local
Find 576 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGTAATATTAATATAAT+TGG | 0.117709 | tig0034325:-18115 | None:intergenic |
| ATTAATATTACTTGACATTT+TGG | 0.135884 | tig0034325:+18123 | Msa1452930:three_prime_UTR |
| ATATACTCCCTTCTGTATTT+TGG | 0.139179 | tig0034325:-17953 | None:intergenic |
| GTTGATCCAAAGCAAGAATT+TGG | 0.179756 | tig0034325:-15537 | None:intergenic |
| GCACCATTGGAGCTTGCTTC+TGG | 0.221452 | tig0034325:-17815 | None:intergenic |
| ATTTCAATCCAGTTATTAAA+TGG | 0.239451 | tig0034325:+14863 | Msa1452930:CDS |
| CAAACCATTGTCGTTACTAT+TGG | 0.241497 | tig0034325:+12600 | Msa1452930:five_prime_UTR |
| GCAGGCCTGACATTATAATT+TGG | 0.250450 | tig0034325:-17590 | None:intergenic |
| GCAGGCCTGACATTATAATT+TGG | 0.250450 | tig0034325:-17617 | None:intergenic |
| TTTGGCTATGCCATTGGATT+TGG | 0.252709 | tig0034325:-17935 | None:intergenic |
| TTATTAAATGGTTCCCATAT+TGG | 0.255975 | tig0034325:+14875 | Msa1452930:CDS |
| TGGATTTGGAGGCGGGAAAA+AGG | 0.259074 | tig0034325:-10599 | None:intergenic |
| GAGTAACCTCCGTTGTAATT+TGG | 0.260290 | tig0034325:-17644 | None:intergenic |
| TTTCATTCATTCGTTGGATT+TGG | 0.260347 | tig0034325:-10613 | None:intergenic |
| ACGAATATTGCGTAAGTCTT+AGG | 0.260604 | tig0034325:-17220 | None:intergenic |
| TTCTCCCAGCAGATCCAATA+TGG | 0.262095 | tig0034325:-14889 | None:intergenic |
| GCCATTGGATTTGGAGCCTT+TGG | 0.273300 | tig0034325:-17926 | None:intergenic |
| TATGGGAACCATTTAATAAC+TGG | 0.283717 | tig0034325:-14871 | None:intergenic |
| GAAAAGCAAATCAAGTTGTT+TGG | 0.303324 | tig0034325:-18226 | None:intergenic |
| ATTGACATCACCGGATTTCT+TGG | 0.328506 | tig0034325:+18039 | Msa1452930:three_prime_UTR |
| ACTTGTAATCTTCCACCTTC+AGG | 0.329990 | tig0034325:+15762 | Msa1452930:CDS |
| TGAAATCCAAATTCTTGCTT+TGG | 0.332807 | tig0034325:+15531 | Msa1452930:CDS |
| GGGGCAACTGTTGAACCATT+TGG | 0.345887 | tig0034325:+14797 | Msa1452930:intron |
| TTCAGTGGTGGTAAAATTGC+AGG | 0.348532 | tig0034325:-16396 | None:intergenic |
| AATTCTTGCTTTGGATCAAC+AGG | 0.354600 | tig0034325:+15540 | Msa1452930:CDS |
| TTGCTTTGAAGTTGCACCAT+TGG | 0.359043 | tig0034325:-17828 | None:intergenic |
| AGTATAGTGCTACTATTATA+AGG | 0.364928 | tig0034325:+18275 | Msa1452930:three_prime_UTR |
| AAACCATTGTCGTTACTATT+GGG | 0.372987 | tig0034325:+12601 | Msa1452930:five_prime_UTR |
| TGAAAATGGCGCTGTGACTT+TGG | 0.373072 | tig0034325:-17716 | None:intergenic |
| GAATTCTCCGGTTGCTCAAA+AGG | 0.373262 | tig0034325:-17413 | None:intergenic |
| TACTATTATAAGGTTAATTA+CGG | 0.374019 | tig0034325:+18285 | Msa1452930:three_prime_UTR |
| GGGCAACTGTTGAACCATTT+GGG | 0.387693 | tig0034325:+14798 | Msa1452930:CDS |
| CCCCTTTGCCCCTGTGGCTG+TGG | 0.388907 | tig0034325:-17680 | None:intergenic |
| AAAAGCAAATCAAGTTGTTT+GGG | 0.390073 | tig0034325:-18225 | None:intergenic |
| CTTTGGATCAACAGGATAGA+TGG | 0.392570 | tig0034325:+15548 | Msa1452930:CDS |
| GTGAACAAAATGAAAGCAAT+AGG | 0.394326 | tig0034325:-12568 | None:intergenic |
| GAAAATGGCGCTGTGACTTT+GGG | 0.396112 | tig0034325:-17715 | None:intergenic |
| CCTGTTTATGTTGGCAGCAC+AGG | 0.397035 | tig0034325:-16740 | None:intergenic |
| CATTCATTCGTTGGATTTGG+AGG | 0.402202 | tig0034325:-10610 | None:intergenic |
| AGCTCATCCACCATATTGTA+AGG | 0.409258 | tig0034325:-16429 | None:intergenic |
| TTCTTGGGTTACAAGTCAAT+TGG | 0.411463 | tig0034325:+18055 | Msa1452930:three_prime_UTR |
| AGATATATACCCTTACAATA+TGG | 0.416235 | tig0034325:+16419 | Msa1452930:CDS |
| ATGAATTCACATAGTATGTT+GGG | 0.416556 | tig0034325:+12643 | Msa1452930:CDS |
| CAAGTAATATTAATATAATT+GGG | 0.417483 | tig0034325:-18114 | None:intergenic |
| CCTGTGCTGCCAACATAAAC+AGG | 0.419476 | tig0034325:+16740 | Msa1452930:CDS |
| GGTTCCCATATTGGATCTGC+TGG | 0.419616 | tig0034325:+14884 | Msa1452930:CDS |
| AGATGGCCGCTTTCATGATC+TGG | 0.422107 | tig0034325:+15565 | Msa1452930:CDS |
| ATCGGAATTTGCACTTATAG+TGG | 0.425285 | tig0034325:+17160 | Msa1452930:CDS |
| ATCTAATCTCTTCACGCGAT+GGG | 0.429598 | tig0034325:+14829 | Msa1452930:CDS |
| AACAAAGTAGATTCAATGAT+AGG | 0.429828 | tig0034325:+10428 | None:intergenic |
| AAGATAGCTGAAGCATTTGT+AGG | 0.434109 | tig0034325:+17467 | Msa1452930:CDS |
| GGTCTCCATGCCTGCTGCTG+TGG | 0.439622 | tig0034325:-17905 | None:intergenic |
| ACATTATAATTTGGAATGGC+AGG | 0.441132 | tig0034325:-17608 | None:intergenic |
| TGACACCCTCACAAGAAGAT+TGG | 0.441842 | tig0034325:+12695 | Msa1452930:CDS |
| CATTCGTTGGATTTGGAGGC+GGG | 0.449731 | tig0034325:-10606 | None:intergenic |
| ACATTATAATTTGGAATGAC+AGG | 0.451404 | tig0034325:-17581 | None:intergenic |
| TTGACATCACCGGATTTCTT+GGG | 0.452702 | tig0034325:+18040 | Msa1452930:three_prime_UTR |
| ACGTCAAGGTCCACAGCAGC+AGG | 0.452998 | tig0034325:+17895 | Msa1452930:CDS |
| CTCAAAGCTTTGAGGATGAA+AGG | 0.453423 | tig0034325:+14941 | Msa1452930:CDS |
| GACTTGTAACCCAAGAAATC+CGG | 0.461842 | tig0034325:-18049 | None:intergenic |
| TTGCTTTGACGTTGAACCGT+TGG | 0.465095 | tig0034325:-17762 | None:intergenic |
| TCCACAGCCACAGGGGCAAA+GGG | 0.474201 | tig0034325:+17679 | Msa1452930:CDS |
| AATGAATTCACATAGTATGT+TGG | 0.475354 | tig0034325:+12642 | Msa1452930:exon |
| ACAGATCTTGCTGAATTCTC+CGG | 0.480099 | tig0034325:-17425 | None:intergenic |
| CCCTGTGGCTGTGGATGAGT+TGG | 0.480768 | tig0034325:-17671 | None:intergenic |
| CTTCACGCGATGGGGTGACT+TGG | 0.482241 | tig0034325:+14838 | Msa1452930:CDS |
| ATGTGTGGAGTCTTATTGCC+AGG | 0.486616 | tig0034325:+17558 | Msa1452930:CDS |
| TGGATTTGAAGTTGCACCGT+TGG | 0.490464 | tig0034325:-17795 | None:intergenic |
| TCATTCCAAATTATAATGTC+AGG | 0.492163 | tig0034325:+17585 | Msa1452930:CDS |
| GTTTCGATCAATAACCTGTC+GGG | 0.493275 | tig0034325:+15503 | Msa1452930:CDS |
| GACACCCTCACAAGAAGATT+GGG | 0.493660 | tig0034325:+12696 | Msa1452930:CDS |
| CCGTTGTAATTTGGAATGGC+AGG | 0.493742 | tig0034325:-17635 | None:intergenic |
| TAGAATGGGAACTCTTGCAC+TGG | 0.495619 | tig0034325:-15444 | None:intergenic |
| GGGTCTTGTGGATTAAAGGA+TGG | 0.498344 | tig0034325:+18088 | Msa1452930:three_prime_UTR |
| CATCACAAGATATGCCTTGT+CGG | 0.498345 | tig0034325:-15481 | None:intergenic |
| TCCAACTCATCCACAGCCAC+AGG | 0.499353 | tig0034325:+17670 | Msa1452930:CDS |
| AGTTTGCTCAGATCGATGAA+TGG | 0.499446 | tig0034325:+17128 | Msa1452930:intron |
| CCATTCCAAATTATAATGTC+AGG | 0.499895 | tig0034325:+17612 | Msa1452930:CDS |
| GGACCTTGACGTGCTTTAGC+AGG | 0.501971 | tig0034325:-17884 | None:intergenic |
| TACTGTTGAAGTTGCACCGT+TGG | 0.503215 | tig0034325:-17861 | None:intergenic |
| GATGAATGGGCCTCAGAGAT+CGG | 0.505210 | tig0034325:+17142 | Msa1452930:CDS |
| GTTTGCTCAGATCGATGAAT+GGG | 0.505286 | tig0034325:+17129 | Msa1452930:intron |
| TGGATTTCATCAAGCCCGAC+AGG | 0.505327 | tig0034325:-15517 | None:intergenic |
| GTTCTTCTTTGTACTTTGAA+AGG | 0.511867 | tig0034325:-10563 | None:intergenic |
| ACAAGAAGAGGAAGAAGAAG+TGG | 0.512509 | tig0034325:-10497 | None:intergenic |
| ATAAGACTCCACACATGTGC+TGG | 0.513868 | tig0034325:-17551 | None:intergenic |
| CACAAGAAGATTGGGAGATA+CGG | 0.514003 | tig0034325:+12704 | Msa1452930:CDS |
| TATCTAATCTCTTCACGCGA+TGG | 0.514198 | tig0034325:+14828 | Msa1452930:CDS |
| AAGCATTATTCAACAAGAAG+AGG | 0.514482 | tig0034325:-10509 | None:intergenic |
| TCTCCCAGCAGATCCAATAT+GGG | 0.515355 | tig0034325:-14888 | None:intergenic |
| AATCCAACGAATGAATGAAA+AGG | 0.519103 | tig0034325:+10616 | Msa1452930:five_prime_UTR |
| AAAATCAATAACTCTAAGAC+TGG | 0.521420 | tig0034325:+15712 | Msa1452930:CDS |
| ATCCACAGCCACAGGGGCAA+AGG | 0.533541 | tig0034325:+17678 | Msa1452930:CDS |
| AACACGCCCCTTTGCCCCTG+TGG | 0.533905 | tig0034325:-17686 | None:intergenic |
| TATCTCCCAATCTTCTTGTG+AGG | 0.539767 | tig0034325:-12701 | None:intergenic |
| ATCTCCCAATCTTCTTGTGA+GGG | 0.540615 | tig0034325:-12700 | None:intergenic |
| CCTGACATTATAATTTGGAA+TGG | 0.541392 | tig0034325:-17612 | None:intergenic |
| AGATAGCTGAAGCATTTGTA+GGG | 0.542347 | tig0034325:+17468 | Msa1452930:CDS |
| TCATTCGTTGGATTTGGAGG+CGG | 0.547535 | tig0034325:-10607 | None:intergenic |
| ACCTCCGTTGTAATTTGGAA+TGG | 0.548068 | tig0034325:-17639 | None:intergenic |
| ATAATTTGGAATGACAGGCC+TGG | 0.551278 | tig0034325:-17576 | None:intergenic |
| AGAATGGGAACTCTTGCACT+GGG | 0.553145 | tig0034325:-15443 | None:intergenic |
| CTTTCATGATCTGGTTGTAG+TGG | 0.556570 | tig0034325:+15574 | Msa1452930:CDS |
| AGGCAAGGTGCAAGCTCCAA+CGG | 0.557349 | tig0034325:+17746 | Msa1452930:CDS |
| TGGCGCTGTGACTTTGGGTG+TGG | 0.559483 | tig0034325:-17710 | None:intergenic |
| AATCCAGAAGCAAGCTCCAA+TGG | 0.560044 | tig0034325:+17812 | Msa1452930:CDS |
| GGTTCATATCAAACAAGTCC+AGG | 0.565404 | tig0034325:+16761 | Msa1452930:CDS |
| TTAGATACAACTGACCCAAA+TGG | 0.566089 | tig0034325:-14812 | None:intergenic |
| AAGGTCCACAGCAGCAGGCA+TGG | 0.568937 | tig0034325:+17900 | Msa1452930:CDS |
| TACAAGTAAACTGAGCGTAA+AGG | 0.573483 | tig0034325:-15746 | None:intergenic |
| AGCAGAGAGGTACCTGAAGG+TGG | 0.574822 | tig0034325:-15774 | None:intergenic |
| AACGGTTCAACGTCAAAGCA+AGG | 0.580256 | tig0034325:+17764 | Msa1452930:CDS |
| TGATATGAACCTGTTTATGT+TGG | 0.580786 | tig0034325:-16749 | None:intergenic |
| TGGCATAGCCAAAATACAGA+AGG | 0.582933 | tig0034325:+17945 | Msa1452930:exon |
| GAGAATTCAGCAAGATCTGT+CGG | 0.588586 | tig0034325:+17428 | Msa1452930:CDS |
| TGTTTCGATCAATAACCTGT+CGG | 0.592217 | tig0034325:+15502 | Msa1452930:CDS |
| AGATAAAGAACAACATGAGA+TGG | 0.594320 | tig0034325:+17194 | Msa1452930:CDS |
| TTGCACTTATAGTGGACAGT+GGG | 0.595106 | tig0034325:+17168 | Msa1452930:CDS |
| TATATACCCTTACAATATGG+TGG | 0.595530 | tig0034325:+16422 | Msa1452930:CDS |
| AAGCAAGGAGCAAGCTCCAA+CGG | 0.597196 | tig0034325:+17845 | Msa1452930:CDS |
| TTTACCTCTCAGACTCTCCA+CGG | 0.597748 | tig0034325:-12764 | None:intergenic |
| ATAGAAGTAATTGACATCAC+CGG | 0.600819 | tig0034325:+18030 | Msa1452930:three_prime_UTR |
| AATGGTGCAACTTCAAAGCA+AGG | 0.601932 | tig0034325:+17830 | Msa1452930:CDS |
| TGCTCCAGCAGGGATTTCAA+AGG | 0.605624 | tig0034325:+12501 | Msa1452930:intron |
| ACCAAAGGCTCCAAATCCAA+TGG | 0.605670 | tig0034325:+17925 | Msa1452930:CDS |
| GGCTTGTGTAGGTGAAGGAG+TGG | 0.608531 | tig0034325:+15677 | Msa1452930:intron |
| GGCGCTGTGACTTTGGGTGT+GGG | 0.610172 | tig0034325:-17709 | None:intergenic |
| CAAGAAGAGGAAGAAGAAGT+GGG | 0.610604 | tig0034325:-10496 | None:intergenic |
| TTTAACTGATATACTTCGGA+CGG | 0.611571 | tig0034325:+12672 | Msa1452930:CDS |
| TAAGGGTATATATCTTTCAG+TGG | 0.614153 | tig0034325:-16411 | None:intergenic |
| GCGAAGCGCTGCTGAATCCG+TGG | 0.618401 | tig0034325:+12747 | Msa1452930:CDS |
| CAGGGATTTCAAAGGACATG+AGG | 0.622231 | tig0034325:+12509 | Msa1452930:intron |
| GTTCCCATATTGGATCTGCT+GGG | 0.628264 | tig0034325:+14885 | Msa1452930:CDS |
| GCTCATCCACCATATTGTAA+GGG | 0.628670 | tig0034325:-16428 | None:intergenic |
| CCACAGCCACAGGGGCAAAG+GGG | 0.634379 | tig0034325:+17680 | Msa1452930:CDS |
| GGCATAGCCAAAATACAGAA+GGG | 0.637529 | tig0034325:+17946 | Msa1452930:exon |
| TCTAATCTCTTCACGCGATG+GGG | 0.638369 | tig0034325:+14830 | Msa1452930:CDS |
| CCAACTCATCCACAGCCACA+GGG | 0.638903 | tig0034325:+17671 | Msa1452930:CDS |
| GCCATTCCAAATTACAACGG+AGG | 0.642837 | tig0034325:+17638 | Msa1452930:CDS |
| GGGTATATATCTTTCAGTGG+TGG | 0.645534 | tig0034325:-16408 | None:intergenic |
| AAGCAAGGAGCAAACTCCAA+CGG | 0.656235 | tig0034325:+17779 | Msa1452930:CDS |
| GCAGCAGGCATGGAGACCAA+AGG | 0.664174 | tig0034325:+17910 | Msa1452930:CDS |
| CTACAACCAGATCATGAAAG+CGG | 0.665942 | tig0034325:-15571 | None:intergenic |
| AGTTAGCACCAGCACATGTG+TGG | 0.666847 | tig0034325:+17543 | Msa1452930:CDS |
| TTTGCACTTATAGTGGACAG+TGG | 0.675119 | tig0034325:+17167 | Msa1452930:CDS |
| GTACCTGCTAAAGCACGTCA+AGG | 0.675311 | tig0034325:+17881 | Msa1452930:CDS |
| GAATGGGAACTCTTGCACTG+GGG | 0.677287 | tig0034325:-15442 | None:intergenic |
| GCTTGTGTAGGTGAAGGAGT+GGG | 0.679102 | tig0034325:+15678 | Msa1452930:intron |
| AAATTTAAAAGTGTCCGACA+AGG | 0.680098 | tig0034325:+15467 | Msa1452930:CDS |
| TGAAAGGAAGAAGTGTTGTG+TGG | 0.681060 | tig0034325:-10547 | None:intergenic |
| GAATCCGTGGAGAGTCTGAG+AGG | 0.687013 | tig0034325:+12760 | Msa1452930:CDS |
| ACTCCCAATAGTAACGACAA+TGG | 0.703130 | tig0034325:-12604 | None:intergenic |
| CAACTCATCCACAGCCACAG+GGG | 0.708530 | tig0034325:+17672 | Msa1452930:CDS |
| CCTGCCATTCCAAATTACAA+CGG | 0.708652 | tig0034325:+17635 | Msa1452930:CDS |
| AGTGCAAATTCCGATCTCTG+AGG | 0.715212 | tig0034325:-17152 | None:intergenic |
| AATATGGTGGATGAGCTGAG+AGG | 0.762740 | tig0034325:+16435 | Msa1452930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATACTAATATTTTCATTT+TGG | + | tig0034325:13552-13571 | Msa1452930:intron | 10.0% |
| !! | AAAAAAAAAAATCTAAAGAA+TGG | + | tig0034325:14460-14479 | Msa1452930:intron | 10.0% |
| !!! | AAATAGTTTTTAAAATTACT+AGG | - | tig0034325:15228-15247 | None:intergenic | 10.0% |
| !!! | ATCATTTAAGTTATTTATTT+AGG | + | tig0034325:15909-15928 | Msa1452930:intron | 10.0% |
| !! | CAAGTAATATTAATATAATT+GGG | - | tig0034325:18117-18136 | None:intergenic | 10.0% |
| !! | TCAAGTAATATTAATATAAT+TGG | - | tig0034325:18118-18137 | None:intergenic | 10.0% |
| !!! | TTCAATATTGATTATCTTTT+TGG | + | tig0034325:10891-10910 | Msa1452930:intron | 15.0% |
| !!! | TCAATATTGATTATCTTTTT+GGG | + | tig0034325:10892-10911 | Msa1452930:intron | 15.0% |
| !! | ATTCATATAAAAACCTATTA+AGG | - | tig0034325:11179-11198 | None:intergenic | 15.0% |
| !! | TATTAAATCAAGTTACAATT+CGG | - | tig0034325:11287-11306 | None:intergenic | 15.0% |
| !! | TGTAACTTGATTTAATATTT+CGG | + | tig0034325:11290-11309 | Msa1452930:intron | 15.0% |
| !! | TTACAAGGAATATATATAAA+GGG | - | tig0034325:11928-11947 | None:intergenic | 15.0% |
| !! | ATTACAAGGAATATATATAA+AGG | - | tig0034325:11929-11948 | None:intergenic | 15.0% |
| !! | AGATAAAGGAAAAATTATAT+AGG | - | tig0034325:14189-14208 | None:intergenic | 15.0% |
| !! | TCTTAATTTCCATTATTTAT+TGG | - | tig0034325:14542-14561 | None:intergenic | 15.0% |
| !!! | ACACTTTTAAATTTTAGAAT+GGG | - | tig0034325:15461-15480 | None:intergenic | 15.0% |
| !!! | ATTAATATTACTTGACATTT+TGG | + | tig0034325:18123-18142 | Msa1452930:three_prime_UTR | 15.0% |
| !! | TCGGTGAAAAATAAATATAA+GGG | - | tig0034325:10811-10830 | None:intergenic | 20.0% |
| !! | ATCGGTGAAAAATAAATATA+AGG | - | tig0034325:10812-10831 | None:intergenic | 20.0% |
| !!! | TGTGATTTCTTTTTTAGTTA+TGG | + | tig0034325:10980-10999 | Msa1452930:intron | 20.0% |
| !!! | GTGATTTCTTTTTTAGTTAT+GGG | + | tig0034325:10981-11000 | Msa1452930:intron | 20.0% |
| !!! | GAATTGGTTTGAAAAAAAAT+TGG | + | tig0034325:11015-11034 | Msa1452930:intron | 20.0% |
| !! | TTTATATGAATTTATGAGAG+AGG | + | tig0034325:11188-11207 | Msa1452930:intron | 20.0% |
| !! | ATTAAATCAAGTTACAATTC+GGG | - | tig0034325:11286-11305 | None:intergenic | 20.0% |
| !! | GTTCAAAATATTAAGGATAA+CGG | + | tig0034325:11314-11333 | Msa1452930:intron | 20.0% |
| !! | TTAAAAATTAATGAACCGTA+TGG | - | tig0034325:11535-11554 | None:intergenic | 20.0% |
| !! | AATTTATATTTAAACCATGC+AGG | - | tig0034325:11566-11585 | None:intergenic | 20.0% |
| !! | TGGTTTAAATATAAATTGAG+TGG | + | tig0034325:11569-11588 | Msa1452930:intron | 20.0% |
| !! | GGTTTAAATATAAATTGAGT+GGG | + | tig0034325:11570-11589 | Msa1452930:intron | 20.0% |
| !! | GTTTAAATATAAATTGAGTG+GGG | + | tig0034325:11571-11590 | Msa1452930:intron | 20.0% |
| !! | TTTAAATATAAATTGAGTGG+GGG | + | tig0034325:11572-11591 | Msa1452930:intron | 20.0% |
| !! | TACAAGGAATATATATAAAG+GGG | - | tig0034325:11927-11946 | None:intergenic | 20.0% |
| !! | AAACACAACATTACAAAATT+AGG | - | tig0034325:12170-12189 | None:intergenic | 20.0% |
| !!! | TTGTTTTAACTGATATACTT+CGG | + | tig0034325:12668-12687 | Msa1452930:CDS | 20.0% |
| !! | CTAAAGATAAGTAAGATAAA+AGG | + | tig0034325:12848-12867 | Msa1452930:intron | 20.0% |
| !! | GAATTGATATTCCATAAAAA+TGG | + | tig0034325:12880-12899 | Msa1452930:intron | 20.0% |
| !! | GTTCGAACAAAAAAAATATT+GGG | - | tig0034325:13236-13255 | None:intergenic | 20.0% |
| !! | AGTTCGAACAAAAAAAATAT+TGG | - | tig0034325:13237-13256 | None:intergenic | 20.0% |
| !!! | GTATTTTTTTTTTGTAGACT+TGG | + | tig0034325:13393-13412 | Msa1452930:intron | 20.0% |
| !!! | TTTATTTGCGTAGTTTTTTT+GGG | + | tig0034325:13426-13445 | Msa1452930:intron | 20.0% |
| !!! | TGTTTTTTTTTTTATGGACT+TGG | + | tig0034325:13493-13512 | Msa1452930:intron | 20.0% |
| !!! | ACTAATATTTTCATTTTGGT+TGG | + | tig0034325:13556-13575 | Msa1452930:intron | 20.0% |
| !! | TATTGTTTGATATTCATGTA+TGG | + | tig0034325:14124-14143 | Msa1452930:intron | 20.0% |
| !! | CTCATAAATAATCTAAAGAA+TGG | + | tig0034325:14349-14368 | Msa1452930:intron | 20.0% |
| !!! | TTAAAATTGCACTCAATTTT+TGG | + | tig0034325:14770-14789 | Msa1452930:intron | 20.0% |
| !! | ATTTCAATCCAGTTATTAAA+TGG | + | tig0034325:14863-14882 | Msa1452930:CDS | 20.0% |
| !!! | TTCCAAATTTTAAAAGGTAA+CGG | - | tig0034325:15023-15042 | None:intergenic | 20.0% |
| !!! | TTTTTAAATTTAGGAGAATC+AGG | - | tig0034325:15076-15095 | None:intergenic | 20.0% |
| !!! | AGTTTTTAAAATTACTAGGA+AGG | - | tig0034325:15224-15243 | None:intergenic | 20.0% |
| !! | TATAACCATAATTAGCAAAA+AGG | + | tig0034325:15328-15347 | Msa1452930:intron | 20.0% |
| !!! | GACACTTTTAAATTTTAGAA+TGG | - | tig0034325:15462-15481 | None:intergenic | 20.0% |
| !!! | TTTTATTGATTTCCAAAGAA+AGG | + | tig0034325:16813-16832 | Msa1452930:CDS | 20.0% |
| !!! | AATTGGAATTTTAACAGATT+AGG | - | tig0034325:16966-16985 | None:intergenic | 20.0% |
| !! | TTAATGAAAAGCAAACAATA+TGG | + | tig0034325:17016-17035 | Msa1452930:intron | 20.0% |
| !!! | TCTTGTATTTGAATTTTACT+TGG | + | tig0034325:17377-17396 | Msa1452930:intron | 20.0% |
| !!! | TATTTGAATTTTACTTGGTT+AGG | + | tig0034325:17382-17401 | Msa1452930:intron | 20.0% |
| !!! | TTTCATAGTGTACCTTTTTT+GGG | - | tig0034325:10454-10473 | None:intergenic | 25.0% |
| ! | GTCATTGCTAAAATTGAAAT+TGG | - | tig0034325:10789-10808 | None:intergenic | 25.0% |
| !!! | TCTTTTTTAGTTATGGGATT+AGG | + | tig0034325:10987-11006 | Msa1452930:intron | 25.0% |
| !! | TTGTGTAATTCTGTGATTTT+TGG | + | tig0034325:11042-11061 | Msa1452930:intron | 25.0% |
| !! | TAGTTAGAAGATGTTTTCAT+AGG | + | tig0034325:11093-11112 | Msa1452930:intron | 25.0% |
| ! | ATATAAAAACCTATTAAGGC+TGG | - | tig0034325:11175-11194 | None:intergenic | 25.0% |
| ! | AGTATCAACACTATTTGATA+GGG | - | tig0034325:11227-11246 | None:intergenic | 25.0% |
| ! | AAGTATCAACACTATTTGAT+AGG | - | tig0034325:11228-11247 | None:intergenic | 25.0% |
| !!! | TATCAAATAGTGTTGATACT+TGG | + | tig0034325:11227-11246 | Msa1452930:intron | 25.0% |
| ! | TTTCGGAGTTCAAAATATTA+AGG | + | tig0034325:11307-11326 | Msa1452930:intron | 25.0% |
| !! | AAAATATTAAGGATAACGGT+GGG | + | tig0034325:11318-11337 | Msa1452930:intron | 25.0% |
| ! | TATTCTTTGTAATGTTGAAC+CGG | + | tig0034325:11359-11378 | Msa1452930:intron | 25.0% |
| !! | GATTGTGGATTATATGTATT+AGG | + | tig0034325:11764-11783 | Msa1452930:intron | 25.0% |
| !! | AAATGCAAACAGATTTTACA+TGG | - | tig0034325:12077-12096 | None:intergenic | 25.0% |
| ! | CCTATAATCAATAAATGACA+TGG | - | tig0034325:12213-12232 | None:intergenic | 25.0% |
| !! | CCATGTCATTTATTGATTAT+AGG | + | tig0034325:12210-12229 | Msa1452930:intron | 25.0% |
| ! | CGATGTTTATTTCGTATTTA+GGG | - | tig0034325:12273-12292 | None:intergenic | 25.0% |
| ! | ACGATGTTTATTTCGTATTT+AGG | - | tig0034325:12274-12293 | None:intergenic | 25.0% |
| ! | AATGAATTCACATAGTATGT+TGG | + | tig0034325:12642-12661 | Msa1452930:exon | 25.0% |
| ! | ATGAATTCACATAGTATGTT+GGG | + | tig0034325:12643-12662 | Msa1452930:CDS | 25.0% |
| ! | CTAATCAAGTTCTACATTTA+AGG | - | tig0034325:12814-12833 | None:intergenic | 25.0% |
| ! | CTTAAATGTAGAACTTGATT+AGG | + | tig0034325:12812-12831 | Msa1452930:intron | 25.0% |
| ! | TGATATTCCATAAAAATGGA+AGG | + | tig0034325:12884-12903 | Msa1452930:intron | 25.0% |
| ! | TATTTATATTACGATGCCTA+TGG | + | tig0034325:12916-12935 | Msa1452930:intron | 25.0% |
| ! | ACCTTAAAAGCTAATTTGAT+TGG | + | tig0034325:12961-12980 | Msa1452930:intron | 25.0% |
| !!! | TCCAATCAAATTAGCTTTTA+AGG | - | tig0034325:12965-12984 | None:intergenic | 25.0% |
| !! | GATGGTTTCAAAATTGTTTT+TGG | + | tig0034325:13116-13135 | Msa1452930:intron | 25.0% |
| !!! | GTTTATTTGCGTAGTTTTTT+TGG | + | tig0034325:13425-13444 | Msa1452930:intron | 25.0% |
| !!! | TTATTTGCGTAGTTTTTTTG+GGG | + | tig0034325:13427-13446 | Msa1452930:intron | 25.0% |
| !!! | AGTTTTATAGCATATGTTCT+AGG | + | tig0034325:13751-13770 | Msa1452930:intron | 25.0% |
| ! | CATGAATATCAAACAATAGA+AGG | - | tig0034325:14122-14141 | None:intergenic | 25.0% |
| ! | AAGGTTTCTCCAATAAATAA+TGG | + | tig0034325:14530-14549 | Msa1452930:intron | 25.0% |
| ! | TAACACATTTGTTTCAAAGT+TGG | - | tig0034325:14635-14654 | None:intergenic | 25.0% |
| ! | ATACAGAGTATAAAACTTCA+TGG | - | tig0034325:14668-14687 | None:intergenic | 25.0% |
| ! | GTATGAAGTTGTCTTATAAT+AGG | + | tig0034325:14684-14703 | Msa1452930:intron | 25.0% |
| ! | TTATTAAATGGTTCCCATAT+TGG | + | tig0034325:14875-14894 | Msa1452930:CDS | 25.0% |
| !! | TAAATTTTCTCAAAGCTTTG+AGG | + | tig0034325:14933-14952 | Msa1452930:CDS | 25.0% |
| !!! | ATCCGTTACCTTTTAAAATT+TGG | + | tig0034325:15018-15037 | Msa1452930:intron | 25.0% |
| !! | CCTCATTTCCAAATTTTAAA+AGG | - | tig0034325:15029-15048 | None:intergenic | 25.0% |
| !!! | CCTTTTAAAATTTGGAAATG+AGG | + | tig0034325:15026-15045 | Msa1452930:intron | 25.0% |
| ! | AAATAATACATGCACCAAAT+GGG | + | tig0034325:15099-15118 | Msa1452930:intron | 25.0% |
| !!! | TATAGAGCTCTAAAATCTAT+AGG | - | tig0034325:15264-15283 | None:intergenic | 25.0% |
| !!! | GTTATTGATTTTATGTGCTT+TGG | - | tig0034325:15704-15723 | None:intergenic | 25.0% |
| !!! | AAAATCAATAACTCTAAGAC+TGG | + | tig0034325:15712-15731 | Msa1452930:CDS | 25.0% |
| ! | AAAAATGGCAAATGCAAATA+AGG | - | tig0034325:15835-15854 | None:intergenic | 25.0% |
| !!! | TATTTGCATTTGCCATTTTT+TGG | + | tig0034325:15835-15854 | Msa1452930:intron | 25.0% |
| !!! | ATTTGCATTTGCCATTTTTT+GGG | + | tig0034325:15836-15855 | Msa1452930:intron | 25.0% |
| ! | ACAGACAAAACATATTAAAG+CGG | - | tig0034325:16297-16316 | None:intergenic | 25.0% |
| !! | CTTTAATATGTTTTGTCTGT+TGG | + | tig0034325:16297-16316 | Msa1452930:intron | 25.0% |
| ! | AGATATATACCCTTACAATA+TGG | + | tig0034325:16419-16438 | Msa1452930:CDS | 25.0% |
| ! | GGTTATATAAGAACTGATAA+TGG | - | tig0034325:16660-16679 | None:intergenic | 25.0% |
| ! | TGGAAATCAATAAAAAGTTC+AGG | - | tig0034325:16808-16827 | None:intergenic | 25.0% |
| ! | GAGAAAAATTTACCTTTCTT+TGG | - | tig0034325:16828-16847 | None:intergenic | 25.0% |
| ! | GTAAATAAAAAATGCCAAGA+GGG | - | tig0034325:17076-17095 | None:intergenic | 25.0% |
| ! | AGTAAATAAAAAATGCCAAG+AGG | - | tig0034325:17077-17096 | None:intergenic | 25.0% |
| !! | ACATTATAATTTGGAATGAC+AGG | - | tig0034325:17584-17603 | None:intergenic | 25.0% |
| ! | TCATTCCAAATTATAATGTC+AGG | + | tig0034325:17585-17604 | Msa1452930:CDS | 25.0% |
| !! | AAGTCAATTGGCATAATTTT+TGG | + | tig0034325:18067-18086 | Msa1452930:three_prime_UTR | 25.0% |
| !! | AGTCAATTGGCATAATTTTT+GGG | + | tig0034325:18068-18087 | Msa1452930:three_prime_UTR | 25.0% |
| !! | AATATTACTTGACATTTTGG+CGG | + | tig0034325:18126-18145 | Msa1452930:three_prime_UTR | 25.0% |
| !! | AAAAGCAAATCAAGTTGTTT+GGG | - | tig0034325:18228-18247 | None:intergenic | 25.0% |
| !! | AGTATAGTGCTACTATTATA+AGG | + | tig0034325:18275-18294 | Msa1452930:three_prime_UTR | 25.0% |
| !!! | CTTTCATAGTGTACCTTTTT+TGG | - | tig0034325:10455-10474 | None:intergenic | 30.0% |
| AAGCATTATTCAACAAGAAG+AGG | - | tig0034325:10512-10531 | None:intergenic | 30.0% | |
| GTTCTTCTTTGTACTTTGAA+AGG | - | tig0034325:10566-10585 | None:intergenic | 30.0% | |
| TTTCATTCATTCGTTGGATT+TGG | - | tig0034325:10616-10635 | None:intergenic | 30.0% | |
| AATCCAACGAATGAATGAAA+AGG | + | tig0034325:10616-10635 | Msa1452930:five_prime_UTR | 30.0% | |
| ! | TTACCTTTTCATTCATTCGT+TGG | - | tig0034325:10622-10641 | None:intergenic | 30.0% |
| TAAGTAACGTTACTCTTGTA+CGG | + | tig0034325:10685-10704 | Msa1452930:intron | 30.0% | |
| TTATTTAGGTGCTCTTTGAT+TGG | + | tig0034325:10936-10955 | Msa1452930:intron | 30.0% | |
| !!! | TTTTTAGTTATGGGATTAGG+TGG | + | tig0034325:10990-11009 | Msa1452930:intron | 30.0% |
| !!! | TTGGTCTTGTTTTTGTGTTT+TGG | + | tig0034325:11061-11080 | Msa1452930:intron | 30.0% |
| TTTGTTCATAGATGAGATCA+AGG | + | tig0034325:11134-11153 | Msa1452930:intron | 30.0% | |
| TATGAATTTATGAGAGAGGA+AGG | + | tig0034325:11192-11211 | Msa1452930:intron | 30.0% | |
| GTATCAACACTATTTGATAG+GGG | - | tig0034325:11226-11245 | None:intergenic | 30.0% | |
| ! | CAAAATATTAAGGATAACGG+TGG | + | tig0034325:11317-11336 | Msa1452930:intron | 30.0% |
| GAGAGTTTCTAAATTCTTTC+AGG | - | tig0034325:11445-11464 | None:intergenic | 30.0% | |
| ! | TTTTAATAATGTGACCTGCA+TGG | + | tig0034325:11549-11568 | Msa1452930:intron | 30.0% |
| AGGAATATATATAAAGGGGT+TGG | - | tig0034325:11923-11942 | None:intergenic | 30.0% | |
| ! | CAAACAGATTTTACATGGTT+TGG | - | tig0034325:12072-12091 | None:intergenic | 30.0% |
| AACATTACAAAATTAGGAGG+AGG | - | tig0034325:12164-12183 | None:intergenic | 30.0% | |
| CACAACATTACAAAATTAGG+AGG | - | tig0034325:12167-12186 | None:intergenic | 30.0% | |
| CCTTCAAAATCAAATCTTGT+TGG | - | tig0034325:12351-12370 | None:intergenic | 30.0% | |
| !! | CCAACAAGATTTGATTTTGA+AGG | + | tig0034325:12348-12367 | Msa1452930:intron | 30.0% |
| TCCATGTAAATATTCATGTC+AGG | + | tig0034325:12411-12430 | Msa1452930:intron | 30.0% | |
| ACCTGACATGAATATTTACA+TGG | - | tig0034325:12415-12434 | None:intergenic | 30.0% | |
| GTGAACAAAATGAAAGCAAT+AGG | - | tig0034325:12571-12590 | None:intergenic | 30.0% | |
| AAACCATTGTCGTTACTATT+GGG | + | tig0034325:12601-12620 | Msa1452930:five_prime_UTR | 30.0% | |
| TTTAACTGATATACTTCGGA+CGG | + | tig0034325:12672-12691 | Msa1452930:CDS | 30.0% | |
| ATCAAGTTCTACATTTAAGG+AGG | - | tig0034325:12811-12830 | None:intergenic | 30.0% | |
| !! | AGAGAATCCTTCCATTTTTA+TGG | - | tig0034325:12894-12913 | None:intergenic | 30.0% |
| CAGCAAAAATACTTATCCAT+AGG | - | tig0034325:12935-12954 | None:intergenic | 30.0% | |
| !! | CTATGGATAAGTATTTTTGC+TGG | + | tig0034325:12933-12952 | Msa1452930:intron | 30.0% |
| AATTTGATTGGATCAAACCA+AGG | + | tig0034325:12973-12992 | Msa1452930:intron | 30.0% | |
| ATCTTGATAAGTGATAACCT+TGG | - | tig0034325:12993-13012 | None:intergenic | 30.0% | |
| TTCTTCATTTCAACTCAACT+GGG | - | tig0034325:13212-13231 | None:intergenic | 30.0% | |
| TTTCTTCATTTCAACTCAAC+TGG | - | tig0034325:13213-13232 | None:intergenic | 30.0% | |
| TCTTGTAAGTTTAGTAGGAT+CGG | - | tig0034325:13633-13652 | None:intergenic | 30.0% | |
| !! | ATCAAGATTTTGACCAAGAT+CGG | - | tig0034325:13710-13729 | None:intergenic | 30.0% |
| CTATAAAACTGTTTGATCCA+AGG | - | tig0034325:13741-13760 | None:intergenic | 30.0% | |
| !! | AAAGCTCTGAATAAAACAGA+GGG | - | tig0034325:13998-14017 | None:intergenic | 30.0% |
| TGTTTGATATTCATGTATGG+AGG | + | tig0034325:14127-14146 | Msa1452930:intron | 30.0% | |
| ! | TATGTTGTTTGCAGAGATAA+AGG | - | tig0034325:14203-14222 | None:intergenic | 30.0% |
| !! | ATTTCCTACAAGTTGGTATA+TGG | - | tig0034325:14493-14512 | None:intergenic | 30.0% |
| ! | TGAAGTTATTTCCTACAAGT+TGG | - | tig0034325:14500-14519 | None:intergenic | 30.0% |
| ! | ATAACTTCACATTAGCTTGA+AGG | + | tig0034325:14511-14530 | Msa1452930:intron | 30.0% |
| AAGTTGTCTTATAATAGGCT+TGG | + | tig0034325:14689-14708 | Msa1452930:intron | 30.0% | |
| AGTTGTCTTATAATAGGCTT+GGG | + | tig0034325:14690-14709 | Msa1452930:intron | 30.0% | |
| TATGGGAACCATTTAATAAC+TGG | - | tig0034325:14874-14893 | None:intergenic | 30.0% | |
| CAAATAATACATGCACCAAA+TGG | + | tig0034325:15098-15117 | Msa1452930:intron | 30.0% | |
| ! | GCATTCCTTTTTGCTAATTA+TGG | - | tig0034325:15336-15355 | None:intergenic | 30.0% |
| AATTAGCAAAAAGGAATGCA+TGG | + | tig0034325:15337-15356 | Msa1452930:intron | 30.0% | |
| TTGACATGTCCTAATACATT+TGG | + | tig0034325:15375-15394 | Msa1452930:intron | 30.0% | |
| ! | GTGTTATTGCCAAATGTATT+AGG | - | tig0034325:15387-15406 | None:intergenic | 30.0% |
| !! | AAATTTAAAAGTGTCCGACA+AGG | + | tig0034325:15467-15486 | Msa1452930:CDS | 30.0% |
| TGAAATCCAAATTCTTGCTT+TGG | + | tig0034325:15531-15550 | Msa1452930:CDS | 30.0% | |
| CTTCTGCATATTTCTTTATG+TGG | + | tig0034325:15795-15814 | Msa1452930:intron | 30.0% | |
| !!! | TTTGCATTTGCCATTTTTTG+GGG | + | tig0034325:15837-15856 | Msa1452930:intron | 30.0% |
| GAGGGTTGAAAATCAAAAAA+GGG | - | tig0034325:16045-16064 | None:intergenic | 30.0% | |
| !!! | TTTTTTGATTTTCAACCCTC+CGG | + | tig0034325:16045-16064 | Msa1452930:intron | 30.0% |
| ! | TAAGGGTATATATCTTTCAG+TGG | - | tig0034325:16414-16433 | None:intergenic | 30.0% |
| TATATACCCTTACAATATGG+TGG | + | tig0034325:16422-16441 | Msa1452930:CDS | 30.0% | |
| TATTGTATACGTTGAGATGT+TGG | + | tig0034325:16494-16513 | Msa1452930:intron | 30.0% | |
| ATTGTATACGTTGAGATGTT+GGG | + | tig0034325:16495-16514 | Msa1452930:intron | 30.0% | |
| ! | ATAGGAGCTAAAACTGTTTT+TGG | + | tig0034325:16527-16546 | Msa1452930:intron | 30.0% |
| TGATATGAACCTGTTTATGT+TGG | - | tig0034325:16752-16771 | None:intergenic | 30.0% | |
| ! | GGCAAAGATTTTCTGTTAAT+TGG | - | tig0034325:16787-16806 | None:intergenic | 30.0% |
| TAAGAATGCCAGATGTTAAA+TGG | - | tig0034325:16898-16917 | None:intergenic | 30.0% | |
| !! | ATTTTAACAGATTAGGAGAC+AGG | - | tig0034325:16959-16978 | None:intergenic | 30.0% |
| TTATCACTGCAACTTCTAAT+TGG | - | tig0034325:16983-17002 | None:intergenic | 30.0% | |
| AGATAAAGAACAACATGAGA+TGG | + | tig0034325:17194-17213 | Msa1452930:CDS | 30.0% | |
| ! | TTTACATTTTTCTGTGCGAT+TGG | + | tig0034325:17275-17294 | Msa1452930:intron | 30.0% |
| ! | TTACATTTTTCTGTGCGATT+GGG | + | tig0034325:17276-17295 | Msa1452930:intron | 30.0% |
| ATTACTCGCACAAAAATGTT+TGG | + | tig0034325:17314-17333 | Msa1452930:intron | 30.0% | |
| !! | AATTTTACTTGGTTAGGTTG+AGG | + | tig0034325:17388-17407 | Msa1452930:intron | 30.0% |
| ! | ACATTATAATTTGGAATGGC+AGG | - | tig0034325:17611-17630 | None:intergenic | 30.0% |
| CCTGACATTATAATTTGGAA+TGG | - | tig0034325:17588-17607 | None:intergenic | 30.0% | |
| CCATTCCAAATTATAATGTC+AGG | + | tig0034325:17612-17631 | Msa1452930:CDS | 30.0% | |
| ! | ATATACTCCCTTCTGTATTT+TGG | - | tig0034325:17956-17975 | None:intergenic | 30.0% |
| ATAGAAGTAATTGACATCAC+CGG | + | tig0034325:18030-18049 | Msa1452930:three_prime_UTR | 30.0% | |
| !! | ATATTACTTGACATTTTGGC+GGG | + | tig0034325:18127-18146 | Msa1452930:three_prime_UTR | 30.0% |
| ! | GAAAAGCAAATCAAGTTGTT+TGG | - | tig0034325:18229-18248 | None:intergenic | 30.0% |
| TTCAATGATAGGCCCAAAAA+AGG | + | tig0034325:10439-10458 | Msa1452930:five_prime_UTR | 35.0% | |
| !!! | TGGGTTTTAGGTAACTTTCA+AGG | - | tig0034325:10480-10499 | None:intergenic | 35.0% |
| GTAACGTTACTTAGGAAGAA+GGG | - | tig0034325:10678-10697 | None:intergenic | 35.0% | |
| AGTAACGTTACTTAGGAAGA+AGG | - | tig0034325:10679-10698 | None:intergenic | 35.0% | |
| GTACAAGAGTAACGTTACTT+AGG | - | tig0034325:10686-10705 | None:intergenic | 35.0% | |
| AGAAGCAACTTTACTCGTTA+CGG | - | tig0034325:10747-10766 | None:intergenic | 35.0% | |
| AACCCTTCAAATGGGAAAAT+CGG | - | tig0034325:10830-10849 | None:intergenic | 35.0% | |
| GCAAATGTAACCCTTCAAAT+GGG | - | tig0034325:10838-10857 | None:intergenic | 35.0% | |
| AGCAAATGTAACCCTTCAAA+TGG | - | tig0034325:10839-10858 | None:intergenic | 35.0% | |
| CAATGCATCTCAACACAAAA+AGG | - | tig0034325:11256-11275 | None:intergenic | 35.0% | |
| ! | CTTTTTGTGTTGAGATGCAT+TGG | + | tig0034325:11254-11273 | Msa1452930:intron | 35.0% |
| AATCAAGTTACAATTCGGGT+CGG | - | tig0034325:11282-11301 | None:intergenic | 35.0% | |
| ACTCTCTTATTGCTCATTGA+TGG | + | tig0034325:11459-11478 | Msa1452930:intron | 35.0% | |
| CTCTCTTATTGCTCATTGAT+GGG | + | tig0034325:11460-11479 | Msa1452930:intron | 35.0% | |
| CTGTACAGTGTTAATCCATA+CGG | + | tig0034325:11517-11536 | Msa1452930:intron | 35.0% | |
| ! | ATCACTGGTTGGAAATTTCA+CGG | + | tig0034325:11597-11616 | Msa1452930:intron | 35.0% |
| ATAATCCACAATCGACACAA+CGG | - | tig0034325:11757-11776 | None:intergenic | 35.0% | |
| CGCTCCAAAACCAAAATATT+GGG | - | tig0034325:11875-11894 | None:intergenic | 35.0% | |
| !!! | GTTTTGGAGCGCAAATATTA+AGG | + | tig0034325:11884-11903 | Msa1452930:intron | 35.0% |
| AATTCCAAACCAGTACGATA+AGG | + | tig0034325:11946-11965 | Msa1452930:intron | 35.0% | |
| AAGTTAGAGACTGAACTATG+TGG | - | tig0034325:12471-12490 | None:intergenic | 35.0% | |
| CAAACCATTGTCGTTACTAT+TGG | + | tig0034325:12600-12619 | Msa1452930:five_prime_UTR | 35.0% | |
| CATCAATCTTGCTCAAAAAG+GGG | - | tig0034325:13093-13112 | None:intergenic | 35.0% | |
| GCATCAATCTTGCTCAAAAA+GGG | - | tig0034325:13094-13113 | None:intergenic | 35.0% | |
| TGCATCAATCTTGCTCAAAA+AGG | - | tig0034325:13095-13114 | None:intergenic | 35.0% | |
| ATTGCTCTGTGTATATGTCT+TGG | + | tig0034325:13311-13330 | Msa1452930:intron | 35.0% | |
| TTGCTCTGTGTATATGTCTT+GGG | + | tig0034325:13312-13331 | Msa1452930:intron | 35.0% | |
| !!! | GGGCTCAGTTTTTTGTATTT+TGG | + | tig0034325:13333-13352 | Msa1452930:intron | 35.0% |
| CTGCATTCATGATTTGATCT+AGG | + | tig0034325:13363-13382 | Msa1452930:intron | 35.0% | |
| CTTGTAAGTTTAGTAGGATC+GGG | - | tig0034325:13632-13651 | None:intergenic | 35.0% | |
| GATCCTACTAAACTTACAAG+AGG | + | tig0034325:13632-13651 | Msa1452930:intron | 35.0% | |
| GATCCTCTTGTAAGTTTAGT+AGG | - | tig0034325:13638-13657 | None:intergenic | 35.0% | |
| AAAGACACGCTTTCTGTATA+TGG | + | tig0034325:13780-13799 | Msa1452930:intron | 35.0% | |
| TATAATGTGTCTCATTGCTG+TGG | + | tig0034325:13930-13949 | Msa1452930:intron | 35.0% | |
| !! | GAAAGCTCTGAATAAAACAG+AGG | - | tig0034325:13999-14018 | None:intergenic | 35.0% |
| ! | TCAAACAATAGAAGGAGTGT+TGG | - | tig0034325:14114-14133 | None:intergenic | 35.0% |
| TTGATATTCATGTATGGAGG+AGG | + | tig0034325:14130-14149 | Msa1452930:intron | 35.0% | |
| TGATATTCATGTATGGAGGA+GGG | + | tig0034325:14131-14150 | Msa1452930:intron | 35.0% | |
| TCTCGAGGATAGATTCATTA+AGG | - | tig0034325:14266-14285 | None:intergenic | 35.0% | |
| GATACCATATACCAACTTGT+AGG | + | tig0034325:14486-14505 | Msa1452930:intron | 35.0% | |
| ! | TTCAAAGTTGGTTGTACTCA+TGG | - | tig0034325:14623-14642 | None:intergenic | 35.0% |
| GTTGTCTTATAATAGGCTTG+GGG | + | tig0034325:14691-14710 | Msa1452930:intron | 35.0% | |
| TGCATGCTACTATAAGATAC+AGG | - | tig0034325:14718-14737 | None:intergenic | 35.0% | |
| !!! | TTGCACTCAATTTTTGGAAC+AGG | + | tig0034325:14776-14795 | Msa1452930:intron | 35.0% |
| !!! | TGCACTCAATTTTTGGAACA+GGG | + | tig0034325:14777-14796 | Msa1452930:intron | 35.0% |
| TTAGATACAACTGACCCAAA+TGG | - | tig0034325:14815-14834 | None:intergenic | 35.0% | |
| TATGCTAGTGTAAACCCATT+TGG | - | tig0034325:15116-15135 | None:intergenic | 35.0% | |
| GACTTGTGCAAGTACAAATT+TGG | + | tig0034325:15174-15193 | Msa1452930:intron | 35.0% | |
| TACTAGGAAGGAACATTTCA+AGG | - | tig0034325:15212-15231 | None:intergenic | 35.0% | |
| !! | TGGCAATAACACTGATTTAC+AGG | + | tig0034325:15395-15414 | Msa1452930:intron | 35.0% |
| !! | CAATAACACTGATTTACAGG+TGG | + | tig0034325:15398-15417 | Msa1452930:intron | 35.0% |
| TGTTTCGATCAATAACCTGT+CGG | + | tig0034325:15502-15521 | Msa1452930:CDS | 35.0% | |
| GTTGATCCAAAGCAAGAATT+TGG | - | tig0034325:15540-15559 | None:intergenic | 35.0% | |
| ! | AATTCTTGCTTTGGATCAAC+AGG | + | tig0034325:15540-15559 | Msa1452930:CDS | 35.0% |
| TGGCTGAAGTTTCAATAACT+TGG | + | tig0034325:15607-15626 | Msa1452930:intron | 35.0% | |
| GGCTGAAGTTTCAATAACTT+GGG | + | tig0034325:15608-15627 | Msa1452930:intron | 35.0% | |
| TGAAGTTTCAATAACTTGGG+TGG | + | tig0034325:15611-15630 | Msa1452930:intron | 35.0% | |
| TGGGTTTGATTCATTCTTTC+TGG | + | tig0034325:15656-15675 | Msa1452930:intron | 35.0% | |
| TACAAGTAAACTGAGCGTAA+AGG | - | tig0034325:15749-15768 | None:intergenic | 35.0% | |
| !!! | TTGCATTTGCCATTTTTTGG+GGG | + | tig0034325:15838-15857 | Msa1452930:intron | 35.0% |
| ! | TGACAGAAAGTACACAGAAA+AGG | - | tig0034325:15961-15980 | None:intergenic | 35.0% |
| TTGAGGGTCTATTTCATGTA+GGG | - | tig0034325:15993-16012 | None:intergenic | 35.0% | |
| GGAGGGTTGAAAATCAAAAA+AGG | - | tig0034325:16046-16065 | None:intergenic | 35.0% | |
| GACACTAGTAATCCAAAGTT+CGG | + | tig0034325:16083-16102 | Msa1452930:intron | 35.0% | |
| ACACTAGTAATCCAAAGTTC+GGG | + | tig0034325:16084-16103 | Msa1452930:intron | 35.0% | |
| GTCTAGAGAATGATTGTTCT+AGG | + | tig0034325:16122-16141 | Msa1452930:intron | 35.0% | |
| TTTACAAGACTGAAACCAAG+TGG | - | tig0034325:16216-16235 | None:intergenic | 35.0% | |
| ! | TCAGTCTTGTAAAAACTGCT+AGG | + | tig0034325:16223-16242 | Msa1452930:intron | 35.0% |
| TGTCTTCTGCGAATAAGAAA+TGG | + | tig0034325:16321-16340 | Msa1452930:intron | 35.0% | |
| TTGTATACGTTGAGATGTTG+GGG | + | tig0034325:16496-16515 | Msa1452930:intron | 35.0% | |
| ! | GATGTTGGGGCAAATTTTAT+AGG | + | tig0034325:16509-16528 | Msa1452930:intron | 35.0% |
| !! | TTTGTACATGCACTGCTTTT+AGG | + | tig0034325:16614-16633 | Msa1452930:intron | 35.0% |
| !! | TTGTACATGCACTGCTTTTA+GGG | + | tig0034325:16615-16634 | Msa1452930:intron | 35.0% |
| !!! | GCTTTTAGGGTTGAGTTATT+AGG | + | tig0034325:16628-16647 | Msa1452930:intron | 35.0% |
| CAGGAATTACATCAAGACAA+TGG | - | tig0034325:16681-16700 | None:intergenic | 35.0% | |
| ! | AGATTTTCTGTTAATTGGCC+TGG | - | tig0034325:16782-16801 | None:intergenic | 35.0% |
| AAACTATAACATAGCCCTCT+TGG | + | tig0034325:17059-17078 | Msa1452930:intron | 35.0% | |
| ATCGGAATTTGCACTTATAG+TGG | + | tig0034325:17160-17179 | Msa1452930:CDS | 35.0% | |
| ACGAATATTGCGTAAGTCTT+AGG | - | tig0034325:17223-17242 | None:intergenic | 35.0% | |
| ! | TACATTTTTCTGTGCGATTG+GGG | + | tig0034325:17277-17296 | Msa1452930:intron | 35.0% |
| AGCAGGAGAATAAGACAAAA+GGG | - | tig0034325:17343-17362 | None:intergenic | 35.0% | |
| AGAAATATCAATAGCAGAGC+AGG | - | tig0034325:17360-17379 | None:intergenic | 35.0% | |
| ! | AAGATAGCTGAAGCATTTGT+AGG | + | tig0034325:17467-17486 | Msa1452930:CDS | 35.0% |
| ! | AGATAGCTGAAGCATTTGTA+GGG | + | tig0034325:17468-17487 | Msa1452930:CDS | 35.0% |
| TTCTTGGGTTACAAGTCAAT+TGG | + | tig0034325:18055-18074 | Msa1452930:three_prime_UTR | 35.0% | |
| !! | TTTTGGGTCTTGTGGATTAA+AGG | + | tig0034325:18084-18103 | Msa1452930:three_prime_UTR | 35.0% |
| !! | TATTACTTGACATTTTGGCG+GGG | + | tig0034325:18128-18147 | Msa1452930:three_prime_UTR | 35.0% |
| !! | AGGAAGAAGAAGTGGGTTTT+AGG | - | tig0034325:10492-10511 | None:intergenic | 40.0% |
| CAAGAAGAGGAAGAAGAAGT+GGG | - | tig0034325:10499-10518 | None:intergenic | 40.0% | |
| ACAAGAAGAGGAAGAAGAAG+TGG | - | tig0034325:10500-10519 | None:intergenic | 40.0% | |
| !! | TGAAAGGAAGAAGTGTTGTG+TGG | - | tig0034325:10550-10569 | None:intergenic | 40.0% |
| CATTCATTCGTTGGATTTGG+AGG | - | tig0034325:10613-10632 | None:intergenic | 40.0% | |
| !!! | TCACCGATTTTCCCATTTGA+AGG | + | tig0034325:10824-10843 | Msa1452930:intron | 40.0% |
| !!! | CACCGATTTTCCCATTTGAA+GGG | + | tig0034325:10825-10844 | Msa1452930:intron | 40.0% |
| GGGTTACATTTGCTTGATTG+TGG | + | tig0034325:10845-10864 | Msa1452930:intron | 40.0% | |
| ATGGGATTAGGTGGTTGAAT+TGG | + | tig0034325:10999-11018 | Msa1452930:intron | 40.0% | |
| GTTAATGTGCCAGCCTTAAT+AGG | + | tig0034325:11163-11182 | Msa1452930:intron | 40.0% | |
| ! | TTAAGGATAACGGTGGGAAT+CGG | + | tig0034325:11324-11343 | Msa1452930:intron | 40.0% |
| AATGTTGAACCGGTACAGTA+AGG | + | tig0034325:11369-11388 | Msa1452930:intron | 40.0% | |
| ATGTTGAACCGGTACAGTAA+GGG | + | tig0034325:11370-11389 | Msa1452930:intron | 40.0% | |
| CTATAACTCCCTTACTGTAC+CGG | - | tig0034325:11381-11400 | None:intergenic | 40.0% | |
| GGTACAGTAAGGGAGTTATA+GGG | + | tig0034325:11380-11399 | Msa1452930:intron | 40.0% | |
| ! | TTATTGCTCATTGATGGGCA+GGG | + | tig0034325:11465-11484 | Msa1452930:intron | 40.0% |
| ! | TCACTGGTTGGAAATTTCAC+GGG | + | tig0034325:11598-11617 | Msa1452930:intron | 40.0% |
| AATGTAACCTACGTCAACGA+GGG | - | tig0034325:11637-11656 | None:intergenic | 40.0% | |
| !! | CGCATGATAGCGTTTTTATG+CGG | + | tig0034325:11803-11822 | Msa1452930:intron | 40.0% |
| CGCGCATTGAATCACATTAA+TGG | + | tig0034325:11827-11846 | Msa1452930:intron | 40.0% | |
| ! | ATCACATTAATGGACCGACT+CGG | + | tig0034325:11837-11856 | Msa1452930:intron | 40.0% |
| CAAAACCAAAATATTGGGCC+GGG | - | tig0034325:11870-11889 | None:intergenic | 40.0% | |
| CCAAAACCAAAATATTGGGC+CGG | - | tig0034325:11871-11890 | None:intergenic | 40.0% | |
| GCGCTCCAAAACCAAAATAT+TGG | - | tig0034325:11876-11895 | None:intergenic | 40.0% | |
| !! | CGTACTGGTTTGGAATTACA+AGG | - | tig0034325:11943-11962 | None:intergenic | 40.0% |
| !! | GTATCCTTATCGTACTGGTT+TGG | - | tig0034325:11953-11972 | None:intergenic | 40.0% |
| ACCAGTACGATAAGGATACT+AGG | + | tig0034325:11954-11973 | Msa1452930:intron | 40.0% | |
| CCAGTACGATAAGGATACTA+GGG | + | tig0034325:11955-11974 | Msa1452930:intron | 40.0% | |
| ! | GGTTTCTCAGAGTATCATTG+CGG | + | tig0034325:11976-11995 | Msa1452930:intron | 40.0% |
| ! | CGGCTCTCTTATCTATTTTC+CGG | + | tig0034325:11996-12015 | Msa1452930:intron | 40.0% |
| GAGAGATTCTTACTTCTCTC+CGG | - | tig0034325:12018-12037 | None:intergenic | 40.0% | |
| TTGTGATTGTGCTTGATGCT+TGG | + | tig0034325:12240-12259 | Msa1452930:intron | 40.0% | |
| TGTGATTGTGCTTGATGCTT+GGG | + | tig0034325:12241-12260 | Msa1452930:intron | 40.0% | |
| GTCTAGATACCTTCTGATGT+TGG | + | tig0034325:12310-12329 | Msa1452930:intron | 40.0% | |
| CTTCTGATGTTGGTATCATG+CGG | + | tig0034325:12320-12339 | Msa1452930:intron | 40.0% | |
| TTCTGATGTTGGTATCATGC+GGG | + | tig0034325:12321-12340 | Msa1452930:intron | 40.0% | |
| TTATGAACAATTGCTCCAGC+AGG | + | tig0034325:12490-12509 | Msa1452930:intron | 40.0% | |
| TATGAACAATTGCTCCAGCA+GGG | + | tig0034325:12491-12510 | Msa1452930:intron | 40.0% | |
| ACTCCCAATAGTAACGACAA+TGG | - | tig0034325:12607-12626 | None:intergenic | 40.0% | |
| ATCTCCCAATCTTCTTGTGA+GGG | - | tig0034325:12703-12722 | None:intergenic | 40.0% | |
| TATCTCCCAATCTTCTTGTG+AGG | - | tig0034325:12704-12723 | None:intergenic | 40.0% | |
| CACAAGAAGATTGGGAGATA+CGG | + | tig0034325:12704-12723 | Msa1452930:CDS | 40.0% | |
| TGAGCAAGATTGATGCAAGA+TGG | + | tig0034325:13098-13117 | Msa1452930:intron | 40.0% | |
| ACGCACAATCTTGCAATTTC+AGG | - | tig0034325:13144-13163 | None:intergenic | 40.0% | |
| !! | TTTTTGGGCTCGGATTTACT+CGG | + | tig0034325:13175-13194 | Msa1452930:intron | 40.0% |
| TGCTCTGTGTATATGTCTTG+GGG | + | tig0034325:13313-13332 | Msa1452930:intron | 40.0% | |
| TTGGTTGGATCTTACAATCG+TGG | + | tig0034325:13571-13590 | Msa1452930:intron | 40.0% | |
| TAAGTTTAGTAGGATCGGGA+GGG | - | tig0034325:13628-13647 | None:intergenic | 40.0% | |
| ATCATGCAAGATCGCAACTA+CGG | - | tig0034325:13667-13686 | None:intergenic | 40.0% | |
| !! | AGATTTTGACCAAGATCGGA+AGG | - | tig0034325:13706-13725 | None:intergenic | 40.0% |
| AATCTTGATCCTGACAACCT+TGG | + | tig0034325:13721-13740 | Msa1452930:intron | 40.0% | |
| TAATGTAATTAGCCCCTGCA+TGG | - | tig0034325:13817-13836 | None:intergenic | 40.0% | |
| ATAGGTCTGATCCTGTTACT+GGG | - | tig0034325:13956-13975 | None:intergenic | 40.0% | |
| TCTATCCTCGAGATATCTCA+AGG | + | tig0034325:14273-14292 | Msa1452930:intron | 40.0% | |
| TAGAACCTTGAGATATCTCG+AGG | - | tig0034325:14281-14300 | None:intergenic | 40.0% | |
| AAGAATGGAAAGAACCCACT+TGG | + | tig0034325:14364-14383 | Msa1452930:intron | 40.0% | |
| AGAATGGAAAGAACCCACTT+GGG | + | tig0034325:14365-14384 | Msa1452930:intron | 40.0% | |
| !!! | GCACTCAATTTTTGGAACAG+GGG | + | tig0034325:14778-14797 | Msa1452930:intron | 40.0% |
| TATCTAATCTCTTCACGCGA+TGG | + | tig0034325:14828-14847 | Msa1452930:CDS | 40.0% | |
| ATCTAATCTCTTCACGCGAT+GGG | + | tig0034325:14829-14848 | Msa1452930:CDS | 40.0% | |
| !! | CTCAAAGCTTTGAGGATGAA+AGG | + | tig0034325:14941-14960 | Msa1452930:CDS | 40.0% |
| TACTTGAAACTTCTGTCGCA+TGG | + | tig0034325:14974-14993 | Msa1452930:intron | 40.0% | |
| CATCACAAGATATGCCTTGT+CGG | - | tig0034325:15484-15503 | None:intergenic | 40.0% | |
| GTTTCGATCAATAACCTGTC+GGG | + | tig0034325:15503-15522 | Msa1452930:CDS | 40.0% | |
| CTTTGGATCAACAGGATAGA+TGG | + | tig0034325:15548-15567 | Msa1452930:CDS | 40.0% | |
| CTACAACCAGATCATGAAAG+CGG | - | tig0034325:15574-15593 | None:intergenic | 40.0% | |
| CTTTCATGATCTGGTTGTAG+TGG | + | tig0034325:15574-15593 | Msa1452930:CDS | 40.0% | |
| !! | TCATTCTTTCTGGCTTGTGT+AGG | + | tig0034325:15666-15685 | Msa1452930:intron | 40.0% |
| ACTTGTAATCTTCCACCTTC+AGG | + | tig0034325:15762-15781 | Msa1452930:CDS | 40.0% | |
| AGAAATATGCAGAAGCAGAG+AGG | - | tig0034325:15790-15809 | None:intergenic | 40.0% | |
| !!! | TGCATTTGCCATTTTTTGGG+GGG | + | tig0034325:15839-15858 | Msa1452930:intron | 40.0% |
| TGGTCAATGTAGCAGATTCT+TGG | + | tig0034325:15862-15881 | Msa1452930:intron | 40.0% | |
| GTTGAGGGTCTATTTCATGT+AGG | - | tig0034325:15994-16013 | None:intergenic | 40.0% | |
| AGGCACTATCAAATGGTTGA+GGG | - | tig0034325:16009-16028 | None:intergenic | 40.0% | |
| ! | AAGGCACTATCAAATGGTTG+AGG | - | tig0034325:16010-16029 | None:intergenic | 40.0% |
| !! | AGACTGAAGGCACTATCAAA+TGG | - | tig0034325:16016-16035 | None:intergenic | 40.0% |
| TCTAGGCAAAACTTCAACTC+AGG | + | tig0034325:16139-16158 | Msa1452930:intron | 40.0% | |
| TGTAAAAACTGCTAGGTGCT+TGG | + | tig0034325:16230-16249 | Msa1452930:intron | 40.0% | |
| GATCTTTGTCTTCTGATGCA+TGG | + | tig0034325:16343-16362 | Msa1452930:intron | 40.0% | |
| TTCAGTGGTGGTAAAATTGC+AGG | - | tig0034325:16399-16418 | None:intergenic | 40.0% | |
| GGGTATATATCTTTCAGTGG+TGG | - | tig0034325:16411-16430 | None:intergenic | 40.0% | |
| GCTCATCCACCATATTGTAA+GGG | - | tig0034325:16431-16450 | None:intergenic | 40.0% | |
| AGCTCATCCACCATATTGTA+AGG | - | tig0034325:16432-16451 | None:intergenic | 40.0% | |
| TGTCTTGATGTAATTCCTGC+AGG | + | tig0034325:16682-16701 | Msa1452930:intron | 40.0% | |
| GGTTCATATCAAACAAGTCC+AGG | + | tig0034325:16761-16780 | Msa1452930:CDS | 40.0% | |
| TGCTCTCTCCATTTAACATC+TGG | + | tig0034325:16887-16906 | Msa1452930:intron | 40.0% | |
| ! | AGTTTGCTCAGATCGATGAA+TGG | + | tig0034325:17128-17147 | Msa1452930:intron | 40.0% |
| GTTTGCTCAGATCGATGAAT+GGG | + | tig0034325:17129-17148 | Msa1452930:intron | 40.0% | |
| !! | TTTGCACTTATAGTGGACAG+TGG | + | tig0034325:17167-17186 | Msa1452930:CDS | 40.0% |
| !! | TTGCACTTATAGTGGACAGT+GGG | + | tig0034325:17168-17187 | Msa1452930:CDS | 40.0% |
| GCAGGAGAATAAGACAAAAG+GGG | - | tig0034325:17342-17361 | None:intergenic | 40.0% | |
| GAGCAGGAGAATAAGACAAA+AGG | - | tig0034325:17344-17363 | None:intergenic | 40.0% | |
| ACAGATCTTGCTGAATTCTC+CGG | - | tig0034325:17428-17447 | None:intergenic | 40.0% | |
| GAGAATTCAGCAAGATCTGT+CGG | + | tig0034325:17428-17447 | Msa1452930:CDS | 40.0% | |
| ! | ATAATTTGGAATGACAGGCC+TGG | - | tig0034325:17579-17598 | None:intergenic | 40.0% |
| GCAGGCCTGACATTATAATT+TGG | - | tig0034325:17593-17612 | None:intergenic | 40.0% | |
| GCAGGCCTGACATTATAATT+TGG | - | tig0034325:17593-17612 | None:intergenic | 40.0% | |
| CCTGCCATTCCAAATTACAA+CGG | + | tig0034325:17635-17654 | Msa1452930:CDS | 40.0% | |
| ACCTCCGTTGTAATTTGGAA+TGG | - | tig0034325:17642-17661 | None:intergenic | 40.0% | |
| GAGTAACCTCCGTTGTAATT+TGG | - | tig0034325:17647-17666 | None:intergenic | 40.0% | |
| !! | TCACAGCGCCATTTTCAAAA+TGG | + | tig0034325:17722-17741 | Msa1452930:CDS | 40.0% |
| !!! | CTTGCCTGCCATTTTGAAAA+TGG | - | tig0034325:17733-17752 | None:intergenic | 40.0% |
| ! | CATTTTCAAAATGGCAGGCA+AGG | + | tig0034325:17731-17750 | Msa1452930:CDS | 40.0% |
| !! | TTGCTTTGAAGTTGCACCAT+TGG | - | tig0034325:17831-17850 | None:intergenic | 40.0% |
| AATGGTGCAACTTCAAAGCA+AGG | + | tig0034325:17830-17849 | Msa1452930:CDS | 40.0% | |
| TTTGGCTATGCCATTGGATT+TGG | - | tig0034325:17938-17957 | None:intergenic | 40.0% | |
| !!! | CTGTATTTTGGCTATGCCAT+TGG | - | tig0034325:17944-17963 | None:intergenic | 40.0% |
| TGGCATAGCCAAAATACAGA+AGG | + | tig0034325:17945-17964 | Msa1452930:exon | 40.0% | |
| GGCATAGCCAAAATACAGAA+GGG | + | tig0034325:17946-17965 | Msa1452930:exon | 40.0% | |
| ATTGACATCACCGGATTTCT+TGG | + | tig0034325:18039-18058 | Msa1452930:three_prime_UTR | 40.0% | |
| TTGACATCACCGGATTTCTT+GGG | + | tig0034325:18040-18059 | Msa1452930:three_prime_UTR | 40.0% | |
| GACTTGTAACCCAAGAAATC+CGG | - | tig0034325:18052-18071 | None:intergenic | 40.0% | |
| !!! | GGCATAATTTTTGGGTCTTG+TGG | + | tig0034325:18076-18095 | Msa1452930:three_prime_UTR | 40.0% |
| TCATTCGTTGGATTTGGAGG+CGG | - | tig0034325:10610-10629 | None:intergenic | 45.0% | |
| TATGAGAGAGGAAGGAACAC+TGG | + | tig0034325:11200-11219 | Msa1452930:intron | 45.0% | |
| CGGTACAGTAAGGGAGTTAT+AGG | + | tig0034325:11379-11398 | Msa1452930:intron | 45.0% | |
| ! | GGTTTCTCAGTGTATCGATG+CGG | + | tig0034325:11401-11420 | Msa1452930:intron | 45.0% |
| ! | GTTTCTCAGTGTATCGATGC+GGG | + | tig0034325:11402-11421 | Msa1452930:intron | 45.0% |
| ! | CTTATTGCTCATTGATGGGC+AGG | + | tig0034325:11464-11483 | Msa1452930:intron | 45.0% |
| CAATGTAACCTACGTCAACG+AGG | - | tig0034325:11638-11657 | None:intergenic | 45.0% | |
| GAATGCACACGTATTCTACG+TGG | - | tig0034325:11667-11686 | None:intergenic | 45.0% | |
| GACACAACGGTAGAGAATCT+TGG | - | tig0034325:11744-11763 | None:intergenic | 45.0% | |
| ! | AGTAACCCGGCCCAATATTT+TGG | + | tig0034325:11862-11881 | Msa1452930:intron | 45.0% |
| !!! | CCGGCCCAATATTTTGGTTT+TGG | + | tig0034325:11868-11887 | Msa1452930:intron | 45.0% |
| CCCTAGTATCCTTATCGTAC+TGG | - | tig0034325:11958-11977 | None:intergenic | 45.0% | |
| CAATTTGACCTACATCCACG+CGG | - | tig0034325:12048-12067 | None:intergenic | 45.0% | |
| CGCATGATACCAACATCAGA+AGG | - | tig0034325:12322-12341 | None:intergenic | 45.0% | |
| TCTGATGTTGGTATCATGCG+GGG | + | tig0034325:12322-12341 | Msa1452930:intron | 45.0% | |
| !! | ATGTCCTTTGAAATCCCTGC+TGG | - | tig0034325:12508-12527 | None:intergenic | 45.0% |
| CAGGGATTTCAAAGGACATG+AGG | + | tig0034325:12509-12528 | Msa1452930:intron | 45.0% | |
| TGACACCCTCACAAGAAGAT+TGG | + | tig0034325:12695-12714 | Msa1452930:CDS | 45.0% | |
| GACACCCTCACAAGAAGATT+GGG | + | tig0034325:12696-12715 | Msa1452930:CDS | 45.0% | |
| TTTACCTCTCAGACTCTCCA+CGG | - | tig0034325:12767-12786 | None:intergenic | 45.0% | |
| ATCTTGCGTGCAAGTCAGAT+CGG | - | tig0034325:13070-13089 | None:intergenic | 45.0% | |
| ! | TGCGTGATCCTGAGTGTTTT+TGG | + | tig0034325:13159-13178 | Msa1452930:intron | 45.0% |
| ! | GCGTGATCCTGAGTGTTTTT+GGG | + | tig0034325:13160-13179 | Msa1452930:intron | 45.0% |
| !!! | ATCCTGAGTGTTTTTGGGCT+CGG | + | tig0034325:13165-13184 | Msa1452930:intron | 45.0% |
| AGGCAGAGATGGTTGTTAGA+GGG | - | tig0034325:13269-13288 | None:intergenic | 45.0% | |
| AAGGCAGAGATGGTTGTTAG+AGG | - | tig0034325:13270-13289 | None:intergenic | 45.0% | |
| AAGTTTAGTAGGATCGGGAG+GGG | - | tig0034325:13627-13646 | None:intergenic | 45.0% | |
| GTAAGTTTAGTAGGATCGGG+AGG | - | tig0034325:13629-13648 | None:intergenic | 45.0% | |
| TTTGACCAAGATCGGAAGGT+GGG | - | tig0034325:13702-13721 | None:intergenic | 45.0% | |
| ! | TTTTGACCAAGATCGGAAGG+TGG | - | tig0034325:13703-13722 | None:intergenic | 45.0% |
| CTGTTTGATCCAAGGTTGTC+AGG | - | tig0034325:13733-13752 | None:intergenic | 45.0% | |
| TGGTGAAAGAAGATCCATGC+AGG | + | tig0034325:13800-13819 | Msa1452930:intron | 45.0% | |
| GGTGAAAGAAGATCCATGCA+GGG | + | tig0034325:13801-13820 | Msa1452930:intron | 45.0% | |
| GTGAAAGAAGATCCATGCAG+GGG | + | tig0034325:13802-13821 | Msa1452930:intron | 45.0% | |
| CATAGGTCTGATCCTGTTAC+TGG | - | tig0034325:13957-13976 | None:intergenic | 45.0% | |
| GTAACAGGATCAGACCTATG+TGG | + | tig0034325:13957-13976 | Msa1452930:intron | 45.0% | |
| ATAGAACCTGAGACCTTGAG+AGG | - | tig0034325:14430-14449 | None:intergenic | 45.0% | |
| GGGCAACTGTTGAACCATTT+GGG | + | tig0034325:14798-14817 | Msa1452930:CDS | 45.0% | |
| TCTAATCTCTTCACGCGATG+GGG | + | tig0034325:14830-14849 | Msa1452930:CDS | 45.0% | |
| GTTCCCATATTGGATCTGCT+GGG | + | tig0034325:14885-14904 | Msa1452930:CDS | 45.0% | |
| TCTCCCAGCAGATCCAATAT+GGG | - | tig0034325:14891-14910 | None:intergenic | 45.0% | |
| TTCTCCCAGCAGATCCAATA+TGG | - | tig0034325:14892-14911 | None:intergenic | 45.0% | |
| AACTTCTGTCGCATGGAAGT+TGG | + | tig0034325:14981-15000 | Msa1452930:intron | 45.0% | |
| AGAATGGGAACTCTTGCACT+GGG | - | tig0034325:15446-15465 | None:intergenic | 45.0% | |
| TAGAATGGGAACTCTTGCAC+TGG | - | tig0034325:15447-15466 | None:intergenic | 45.0% | |
| GTTGTAGTGGTACGTTCTTG+TGG | + | tig0034325:15587-15606 | Msa1452930:intron | 45.0% | |
| TGCTGGGCTAACAATTGCTT+GGG | + | tig0034325:15637-15656 | Msa1452930:intron | 45.0% | |
| !! | TTTCTGGCTTGTGTAGGTGA+AGG | + | tig0034325:15672-15691 | Msa1452930:intron | 45.0% |
| !!! | ATTTGCCATTTTTTGGGGGG+TGG | + | tig0034325:15842-15861 | Msa1452930:intron | 45.0% |
| ATTGACCACCCCCCAAAAAA+TGG | - | tig0034325:15850-15869 | None:intergenic | 45.0% | |
| GGGTCTATTTCATGTAGGGA+GGG | - | tig0034325:15989-16008 | None:intergenic | 45.0% | |
| AGGGTCTATTTCATGTAGGG+AGG | - | tig0034325:15990-16009 | None:intergenic | 45.0% | |
| ! | TGATAGTGCCTTCAGTCTCT+TGG | + | tig0034325:16018-16037 | Msa1452930:intron | 45.0% |
| AAAAGGGACCAAGAGACTGA+AGG | - | tig0034325:16029-16048 | None:intergenic | 45.0% | |
| ! | TTTTCAACCCTCCGGTTCTT+AGG | + | tig0034325:16053-16072 | Msa1452930:intron | 45.0% |
| TTTCAACCCTCCGGTTCTTA+GGG | + | tig0034325:16054-16073 | Msa1452930:intron | 45.0% | |
| ! | TGTCCCTTTTCCCTAAGAAC+CGG | - | tig0034325:16067-16086 | None:intergenic | 45.0% |
| CTAGTAATCCAAAGTTCGGG+TGG | + | tig0034325:16087-16106 | Msa1452930:intron | 45.0% | |
| TAATCCAAAGTTCGGGTGGA+AGG | + | tig0034325:16091-16110 | Msa1452930:intron | 45.0% | |
| !! | AATATGGTGGATGAGCTGAG+AGG | + | tig0034325:16435-16454 | Msa1452930:CDS | 45.0% |
| TCATCGATCTGAGCAAACTG+CGG | - | tig0034325:17127-17146 | None:intergenic | 45.0% | |
| AGTGCAAATTCCGATCTCTG+AGG | - | tig0034325:17155-17174 | None:intergenic | 45.0% | |
| ! | TGAGGATCCTTTTGAGCAAC+CGG | + | tig0034325:17406-17425 | Msa1452930:CDS | 45.0% |
| GAATTCTCCGGTTGCTCAAA+AGG | - | tig0034325:17416-17435 | None:intergenic | 45.0% | |
| ATAAGACTCCACACATGTGC+TGG | - | tig0034325:17554-17573 | None:intergenic | 45.0% | |
| !! | ATGTGTGGAGTCTTATTGCC+AGG | + | tig0034325:17558-17577 | Msa1452930:CDS | 45.0% |
| ! | CCGTTGTAATTTGGAATGGC+AGG | - | tig0034325:17638-17657 | None:intergenic | 45.0% |
| GCCATTCCAAATTACAACGG+AGG | + | tig0034325:17638-17657 | Msa1452930:CDS | 45.0% | |
| GAAAATGGCGCTGTGACTTT+GGG | - | tig0034325:17718-17737 | None:intergenic | 45.0% | |
| TGAAAATGGCGCTGTGACTT+TGG | - | tig0034325:17719-17738 | None:intergenic | 45.0% | |
| !! | AGCGCCATTTTCAAAATGGC+AGG | + | tig0034325:17726-17745 | Msa1452930:CDS | 45.0% |
| TTGCTTTGACGTTGAACCGT+TGG | - | tig0034325:17765-17784 | None:intergenic | 45.0% | |
| AACGGTTCAACGTCAAAGCA+AGG | + | tig0034325:17764-17783 | Msa1452930:CDS | 45.0% | |
| AAGCAAGGAGCAAACTCCAA+CGG | + | tig0034325:17779-17798 | Msa1452930:CDS | 45.0% | |
| ! | TGGATTTGAAGTTGCACCGT+TGG | - | tig0034325:17798-17817 | None:intergenic | 45.0% |
| AATCCAGAAGCAAGCTCCAA+TGG | + | tig0034325:17812-17831 | Msa1452930:CDS | 45.0% | |
| TACTGTTGAAGTTGCACCGT+TGG | - | tig0034325:17864-17883 | None:intergenic | 45.0% | |
| ACCAAAGGCTCCAAATCCAA+TGG | + | tig0034325:17925-17944 | Msa1452930:CDS | 45.0% | |
| ! | GGGTCTTGTGGATTAAAGGA+TGG | + | tig0034325:18088-18107 | Msa1452930:three_prime_UTR | 45.0% |
| !!! | TTATTTTTTTAGAATTATTT+AGG | + | tig0034325:10922-10941 | Msa1452930:intron | 5.0% |
| !!! | TTTTTTTGTTTTTTTTTTTA+TGG | + | tig0034325:13487-13506 | Msa1452930:intron | 5.0% |
| !!! | TTATTTGTATTTTTAAATTT+AGG | - | tig0034325:15085-15104 | None:intergenic | 5.0% |
| GGATTTGGAGGCGGGAAAAA+GGG | - | tig0034325:10601-10620 | None:intergenic | 50.0% | |
| TGGATTTGGAGGCGGGAAAA+AGG | - | tig0034325:10602-10621 | None:intergenic | 50.0% | |
| CATTCGTTGGATTTGGAGGC+GGG | - | tig0034325:10609-10628 | None:intergenic | 50.0% | |
| ! | AGCCTGCAGTGGATTTCTCA+CGG | - | tig0034325:11499-11518 | None:intergenic | 50.0% |
| TAACACTGTACAGCCTGCAG+TGG | - | tig0034325:11510-11529 | None:intergenic | 50.0% | |
| AATTGAGTGGGGGAGATCAC+TGG | + | tig0034325:11582-11601 | Msa1452930:intron | 50.0% | |
| TTTCCTTCCCTCGTTGACGT+AGG | + | tig0034325:11627-11646 | Msa1452930:intron | 50.0% | |
| TAACCTACGTCAACGAGGGA+AGG | - | tig0034325:11633-11652 | None:intergenic | 50.0% | |
| !! | CTCTACCGTTGTGTCGATTG+TGG | + | tig0034325:11749-11768 | Msa1452930:intron | 50.0% |
| TGCTCCAGCAGGGATTTCAA+AGG | + | tig0034325:12501-12520 | Msa1452930:intron | 50.0% | |
| ATCCGAGCCCAAAAACACTC+AGG | - | tig0034325:13170-13189 | None:intergenic | 50.0% | |
| GAGAGAGTGAAAGGCAGAGA+TGG | - | tig0034325:13280-13299 | None:intergenic | 50.0% | |
| AGGATCAGACCTATGTGGCA+GGG | + | tig0034325:13962-13981 | Msa1452930:intron | 50.0% | |
| TGGAAAGAACCCACTTGGGT+TGG | + | tig0034325:14369-14388 | Msa1452930:intron | 50.0% | |
| ACTACCAGACCAACCCAAGT+GGG | - | tig0034325:14381-14400 | None:intergenic | 50.0% | |
| !! | TTGGGTTGGTCTGGTAGTGT+TGG | + | tig0034325:14383-14402 | Msa1452930:intron | 50.0% |
| !! | TTGGTCTGGTAGTGTTGGCT+TGG | + | tig0034325:14388-14407 | Msa1452930:intron | 50.0% |
| !! | TGGTCTGGTAGTGTTGGCTT+GGG | + | tig0034325:14389-14408 | Msa1452930:intron | 50.0% |
| CTTGAGAGGAGCAAACTCGA+AGG | - | tig0034325:14416-14435 | None:intergenic | 50.0% | |
| ! | CTTCGAGTTTGCTCCTCTCA+AGG | + | tig0034325:14414-14433 | Msa1452930:intron | 50.0% |
| TTTGCTCCTCTCAAGGTCTC+AGG | + | tig0034325:14421-14440 | Msa1452930:intron | 50.0% | |
| GGGGCAACTGTTGAACCATT+TGG | + | tig0034325:14797-14816 | Msa1452930:intron | 50.0% | |
| GGTTCCCATATTGGATCTGC+TGG | + | tig0034325:14884-14903 | Msa1452930:CDS | 50.0% | |
| ! | CAGTTTTGCAGGACTGAGTC+AGG | - | tig0034325:15052-15071 | None:intergenic | 50.0% |
| CTGACTCAGTCCTGCAAAAC+TGG | + | tig0034325:15050-15069 | Msa1452930:intron | 50.0% | |
| ! | GAGAATCAGGCCAGTTTTGC+AGG | - | tig0034325:15063-15082 | None:intergenic | 50.0% |
| GAATGGGAACTCTTGCACTG+GGG | - | tig0034325:15445-15464 | None:intergenic | 50.0% | |
| TGGATTTCATCAAGCCCGAC+AGG | - | tig0034325:15520-15539 | None:intergenic | 50.0% | |
| ! | AGATGGCCGCTTTCATGATC+TGG | + | tig0034325:15565-15584 | Msa1452930:CDS | 50.0% |
| AATAACTTGGGTGGCTGTGC+TGG | + | tig0034325:15620-15639 | Msa1452930:intron | 50.0% | |
| ATAACTTGGGTGGCTGTGCT+GGG | + | tig0034325:15621-15640 | Msa1452930:intron | 50.0% | |
| GTGCTGGGCTAACAATTGCT+TGG | + | tig0034325:15636-15655 | Msa1452930:intron | 50.0% | |
| GCTTGTGTAGGTGAAGGAGT+GGG | + | tig0034325:15678-15697 | Msa1452930:intron | 50.0% | |
| !! | AGAAGCAGAGAGGTACCTGA+AGG | - | tig0034325:15780-15799 | None:intergenic | 50.0% |
| ! | CCTTTTCCCTAAGAACCGGA+GGG | - | tig0034325:16063-16082 | None:intergenic | 50.0% |
| CCTCCGGTTCTTAGGGAAAA+GGG | + | tig0034325:16061-16080 | Msa1452930:intron | 50.0% | |
| CTTACCTTCCACCCGAACTT+TGG | - | tig0034325:16098-16117 | None:intergenic | 50.0% | |
| AACCTGTGAGCTCAACCACT+TGG | + | tig0034325:16198-16217 | Msa1452930:intron | 50.0% | |
| AACCAAGTGGTTGAGCTCAC+AGG | - | tig0034325:16203-16222 | None:intergenic | 50.0% | |
| CCTGTTTATGTTGGCAGCAC+AGG | - | tig0034325:16743-16762 | None:intergenic | 50.0% | |
| CCTGTGCTGCCAACATAAAC+AGG | + | tig0034325:16740-16759 | Msa1452930:CDS | 50.0% | |
| CATCGATCTGAGCAAACTGC+GGG | - | tig0034325:17126-17145 | None:intergenic | 50.0% | |
| GATGAATGGGCCTCAGAGAT+CGG | + | tig0034325:17142-17161 | Msa1452930:CDS | 50.0% | |
| AGTTAGCACCAGCACATGTG+TGG | + | tig0034325:17543-17562 | Msa1452930:CDS | 50.0% | |
| AAGCAAGGAGCAAGCTCCAA+CGG | + | tig0034325:17845-17864 | Msa1452930:CDS | 50.0% | |
| GTACCTGCTAAAGCACGTCA+AGG | + | tig0034325:17881-17900 | Msa1452930:CDS | 50.0% | |
| ! | GCCATTGGATTTGGAGCCTT+TGG | - | tig0034325:17929-17948 | None:intergenic | 50.0% |
| TCCCGTGAGAAATCCACTGC+AGG | + | tig0034325:11494-11513 | Msa1452930:intron | 55.0% | |
| ! | GCCTGCAGTGGATTTCTCAC+GGG | - | tig0034325:11498-11517 | None:intergenic | 55.0% |
| !! | GACCGACTCGGATAGTAACC+CGG | + | tig0034325:11849-11868 | Msa1452930:intron | 55.0% |
| GAATCCGTGGAGAGTCTGAG+AGG | + | tig0034325:12760-12779 | Msa1452930:CDS | 55.0% | |
| CAAGTCAGATCGGAAGGGGT+GGG | - | tig0034325:13060-13079 | None:intergenic | 55.0% | |
| CGTGCAAGTCAGATCGGAAG+GGG | - | tig0034325:13064-13083 | None:intergenic | 55.0% | |
| GCGTGCAAGTCAGATCGGAA+GGG | - | tig0034325:13065-13084 | None:intergenic | 55.0% | |
| TGCGTGCAAGTCAGATCGGA+AGG | - | tig0034325:13066-13085 | None:intergenic | 55.0% | |
| CCAAGTCGCGAGAGAGTGAA+AGG | - | tig0034325:13289-13308 | None:intergenic | 55.0% | |
| CCTTTCACTCTCTCGCGACT+TGG | + | tig0034325:13286-13305 | Msa1452930:intron | 55.0% | |
| TGCTACCCACCTTCCGATCT+TGG | + | tig0034325:13694-13713 | Msa1452930:intron | 55.0% | |
| CATTGCTGTGGCCCAGTAAC+AGG | + | tig0034325:13942-13961 | Msa1452930:intron | 55.0% | |
| CAGGATCAGACCTATGTGGC+AGG | + | tig0034325:13961-13980 | Msa1452930:intron | 55.0% | |
| GCTAGTCATCCCTGCCACAT+AGG | - | tig0034325:13974-13993 | None:intergenic | 55.0% | |
| !! | AGAACCCACTTGGGTTGGTC+TGG | + | tig0034325:14374-14393 | Msa1452930:intron | 55.0% |
| CACTACCAGACCAACCCAAG+TGG | - | tig0034325:14382-14401 | None:intergenic | 55.0% | |
| GGCTTGTGTAGGTGAAGGAG+TGG | + | tig0034325:15677-15696 | Msa1452930:intron | 55.0% | |
| !! | AGCAGAGAGGTACCTGAAGG+TGG | - | tig0034325:15777-15796 | None:intergenic | 55.0% |
| CCCTCCGGTTCTTAGGGAAA+AGG | + | tig0034325:16060-16079 | Msa1452930:intron | 55.0% | |
| ! | CCCTTTTCCCTAAGAACCGG+AGG | - | tig0034325:16064-16083 | None:intergenic | 55.0% |
| ! | GCATCAGCTCTAACACCTGC+AGG | - | tig0034325:16700-16719 | None:intergenic | 55.0% |
| TCCAACTCATCCACAGCCAC+AGG | + | tig0034325:17670-17689 | Msa1452930:CDS | 55.0% | |
| CCAACTCATCCACAGCCACA+GGG | + | tig0034325:17671-17690 | Msa1452930:CDS | 55.0% | |
| CAACTCATCCACAGCCACAG+GGG | + | tig0034325:17672-17691 | Msa1452930:CDS | 55.0% | |
| AGGCAAGGTGCAAGCTCCAA+CGG | + | tig0034325:17746-17765 | Msa1452930:CDS | 55.0% | |
| ! | GCACCATTGGAGCTTGCTTC+TGG | - | tig0034325:17818-17837 | None:intergenic | 55.0% |
| GGACCTTGACGTGCTTTAGC+AGG | - | tig0034325:17887-17906 | None:intergenic | 55.0% | |
| GAGTGGGGGAGATCACTGGT+TGG | + | tig0034325:11586-11605 | Msa1452930:intron | 60.0% | |
| GGCCGGGTTACTATCCGAGT+CGG | - | tig0034325:11854-11873 | None:intergenic | 60.0% | |
| AATCTCTCTCCCTGTCCGCG+TGG | + | tig0034325:12030-12049 | Msa1452930:intron | 60.0% | |
| GACCTACATCCACGCGGACA+GGG | - | tig0034325:12042-12061 | None:intergenic | 60.0% | |
| TGACCTACATCCACGCGGAC+AGG | - | tig0034325:12043-12062 | None:intergenic | 60.0% | |
| ATCGGAAGGGGTGGGTGAGT+AGG | - | tig0034325:13052-13071 | None:intergenic | 60.0% | |
| GCAAGTCAGATCGGAAGGGG+TGG | - | tig0034325:13061-13080 | None:intergenic | 60.0% | |
| CTTCACGCGATGGGGTGACT+TGG | + | tig0034325:14838-14857 | Msa1452930:CDS | 60.0% | |
| CCCTGTGGCTGTGGATGAGT+TGG | - | tig0034325:17674-17693 | None:intergenic | 60.0% | |
| ATCCACAGCCACAGGGGCAA+AGG | + | tig0034325:17678-17697 | Msa1452930:CDS | 60.0% | |
| TCCACAGCCACAGGGGCAAA+GGG | + | tig0034325:17679-17698 | Msa1452930:CDS | 60.0% | |
| GGCGCTGTGACTTTGGGTGT+GGG | - | tig0034325:17712-17731 | None:intergenic | 60.0% | |
| TGGCGCTGTGACTTTGGGTG+TGG | - | tig0034325:17713-17732 | None:intergenic | 60.0% | |
| ACGTCAAGGTCCACAGCAGC+AGG | + | tig0034325:17895-17914 | Msa1452930:CDS | 60.0% | |
| AAGGTCCACAGCAGCAGGCA+TGG | + | tig0034325:17900-17919 | Msa1452930:CDS | 60.0% | |
| GCAGCAGGCATGGAGACCAA+AGG | + | tig0034325:17910-17929 | Msa1452930:CDS | 60.0% | |
| CTCCCTGTCCGCGTGGATGT+AGG | + | tig0034325:12037-12056 | Msa1452930:intron | 65.0% | |
| !! | GCGAAGCGCTGCTGAATCCG+TGG | + | tig0034325:12747-12766 | Msa1452930:CDS | 65.0% |
| CCACAGCCACAGGGGCAAAG+GGG | + | tig0034325:17680-17699 | Msa1452930:CDS | 65.0% | |
| AACACGCCCCTTTGCCCCTG+TGG | - | tig0034325:17689-17708 | None:intergenic | 65.0% | |
| GGTCTCCATGCCTGCTGCTG+TGG | - | tig0034325:17908-17927 | None:intergenic | 65.0% | |
| CCCCTTTGCCCCTGTGGCTG+TGG | - | tig0034325:17683-17702 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0034325 | gene | 10435 | 18307 | 10435 | ID=Msa1452930;Name=Msa1452930 |
| tig0034325 | mRNA | 10435 | 18307 | 10435 | ID=Msa1452930-mRNA-1;Parent=Msa1452930;Name=Msa1452930-mRNA-1;_AED=0.09;_eAED=0.09;_QI=334|1|1|1|0.87|0.88|9|355|479 |
| tig0034325 | exon | 10435 | 10637 | 10435 | ID=Msa1452930-mRNA-1:exon:18881;Parent=Msa1452930-mRNA-1 |
| tig0034325 | exon | 12512 | 12781 | 12512 | ID=Msa1452930-mRNA-1:exon:18882;Parent=Msa1452930-mRNA-1 |
| tig0034325 | exon | 14798 | 14962 | 14798 | ID=Msa1452930-mRNA-1:exon:18883;Parent=Msa1452930-mRNA-1 |
| tig0034325 | exon | 15417 | 15595 | 15417 | ID=Msa1452930-mRNA-1:exon:18884;Parent=Msa1452930-mRNA-1 |
| tig0034325 | exon | 15688 | 15783 | 15688 | ID=Msa1452930-mRNA-1:exon:18885;Parent=Msa1452930-mRNA-1 |
| tig0034325 | exon | 16387 | 16456 | 16387 | ID=Msa1452930-mRNA-1:exon:18886;Parent=Msa1452930-mRNA-1 |
| tig0034325 | exon | 16704 | 16834 | 16704 | ID=Msa1452930-mRNA-1:exon:18887;Parent=Msa1452930-mRNA-1 |
| tig0034325 | exon | 17130 | 17240 | 17130 | ID=Msa1452930-mRNA-1:exon:18888;Parent=Msa1452930-mRNA-1 |
| tig0034325 | exon | 17404 | 18307 | 17404 | ID=Msa1452930-mRNA-1:exon:18889;Parent=Msa1452930-mRNA-1 |
| tig0034325 | five_prime_UTR | 10435 | 10637 | 10435 | ID=Msa1452930-mRNA-1:five_prime_utr;Parent=Msa1452930-mRNA-1 |
| tig0034325 | five_prime_UTR | 12512 | 12642 | 12512 | ID=Msa1452930-mRNA-1:five_prime_utr;Parent=Msa1452930-mRNA-1 |
| tig0034325 | CDS | 12643 | 12781 | 12643 | ID=Msa1452930-mRNA-1:cds;Parent=Msa1452930-mRNA-1 |
| tig0034325 | CDS | 14798 | 14962 | 14798 | ID=Msa1452930-mRNA-1:cds;Parent=Msa1452930-mRNA-1 |
| tig0034325 | CDS | 15417 | 15595 | 15417 | ID=Msa1452930-mRNA-1:cds;Parent=Msa1452930-mRNA-1 |
| tig0034325 | CDS | 15688 | 15783 | 15688 | ID=Msa1452930-mRNA-1:cds;Parent=Msa1452930-mRNA-1 |
| tig0034325 | CDS | 16387 | 16456 | 16387 | ID=Msa1452930-mRNA-1:cds;Parent=Msa1452930-mRNA-1 |
| tig0034325 | CDS | 16704 | 16834 | 16704 | ID=Msa1452930-mRNA-1:cds;Parent=Msa1452930-mRNA-1 |
| tig0034325 | CDS | 17130 | 17240 | 17130 | ID=Msa1452930-mRNA-1:cds;Parent=Msa1452930-mRNA-1 |
| tig0034325 | CDS | 17404 | 17952 | 17404 | ID=Msa1452930-mRNA-1:cds;Parent=Msa1452930-mRNA-1 |
| tig0034325 | three_prime_UTR | 17953 | 18307 | 17953 | ID=Msa1452930-mRNA-1:three_prime_utr;Parent=Msa1452930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
