Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0480220 | XP_013460725.1 | 95.825 | 479 | 20 | 0 | 1 | 479 | 1 | 479 | 0.0 | 949 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0480220 | sp|Q5XET5|HESO1_ARATH | 45.010 | 511 | 240 | 7 | 1 | 473 | 1 | 508 | 1.12e-137 | 409 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0480220 | A0A072UY73 | 95.825 | 479 | 20 | 0 | 1 | 479 | 1 | 479 | 0.0 | 949 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008110 | Msa0480220 | 0.800513 | 1.391145e-48 | -8.615850e-47 |
| Msa0122630 | Msa0480220 | 0.812267 | 4.621092e-51 | -8.615850e-47 |
| Msa0225460 | Msa0480220 | 0.862387 | 5.255183e-64 | -8.615850e-47 |
| Msa0225680 | Msa0480220 | 0.871163 | 8.427211e-67 | -8.615850e-47 |
| Msa0417880 | Msa0480220 | 0.808942 | 2.417319e-50 | -8.615850e-47 |
| Msa0428150 | Msa0480220 | 0.838206 | 3.299464e-57 | -8.615850e-47 |
| Msa0462500 | Msa0480220 | 0.847261 | 1.293632e-59 | -8.615850e-47 |
| Msa0480220 | Msa0508150 | 0.881114 | 3.141689e-70 | -8.615850e-47 |
| Msa0480220 | Msa0524190 | 0.805113 | 1.561471e-49 | -8.615850e-47 |
| Msa0480220 | Msa0546680 | 0.803012 | 4.269803e-49 | -8.615850e-47 |
| Msa0480220 | Msa0569200 | 0.803336 | 3.660133e-49 | -8.615850e-47 |
| Msa0480220 | Msa0626450 | 0.808981 | 2.371253e-50 | -8.615850e-47 |
| Msa0480220 | Msa0626490 | 0.814160 | 1.775068e-51 | -8.615850e-47 |
| Msa0480220 | Msa0639430 | 0.822718 | 2.038744e-53 | -8.615850e-47 |
| Msa0480220 | Msa0664600 | 0.810288 | 1.241849e-50 | -8.615850e-47 |
| Msa0480220 | Msa0682330 | 0.808179 | 3.517266e-50 | -8.615850e-47 |
| Msa0480220 | Msa0689520 | 0.815869 | 7.412196e-52 | -8.615850e-47 |
| Msa0480220 | Msa0691980 | 0.800229 | 1.589484e-48 | -8.615850e-47 |
| Msa0480220 | Msa1037640 | 0.803387 | 3.571745e-49 | -8.615850e-47 |
| Msa0480220 | Msa1182860 | 0.808775 | 2.623597e-50 | -8.615850e-47 |
| Msa0480220 | Msa1223470 | 0.817738 | 2.822535e-52 | -8.615850e-47 |
| Msa0480220 | Msa1252190 | 0.801651 | 8.143116e-49 | -8.615850e-47 |
| Msa0480220 | Msa1269480 | 0.852273 | 5.142864e-61 | -8.615850e-47 |
| Msa0480220 | Msa1367370 | 0.809978 | 1.448213e-50 | -8.615850e-47 |
| Msa0480220 | Msa1369550 | 0.809987 | 1.441920e-50 | -8.615850e-47 |
| Msa0480220 | Msa1422420 | 0.854937 | 8.823419e-62 | -8.615850e-47 |
| Msa0480220 | Msa1440960 | 0.805612 | 1.227497e-49 | -8.615850e-47 |
| Msa0480220 | Msa1443110 | 0.803673 | 3.115439e-49 | -8.615850e-47 |
| Msa0480220 | Msa1452930 | 0.987189 | 2.279737e-169 | -8.615850e-47 |
| Msa0248970 | Msa0480220 | 0.814260 | 1.687064e-51 | -8.615850e-47 |
| Msa0292400 | Msa0480220 | 0.805088 | 1.580198e-49 | -8.615850e-47 |
| Msa0314340 | Msa0480220 | 0.800987 | 1.113606e-48 | -8.615850e-47 |
| Msa0349710 | Msa0480220 | 0.800421 | 1.452462e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0480220 | MtrunA17_Chr3g0112301 | 95.825 | 479 | 20 | 0 | 1 | 479 | 1 | 479 | 0.0 | 949 |
| Msa0480220 | MtrunA17_Chr3g0130901 | 31.420 | 331 | 195 | 9 | 7 | 331 | 46 | 350 | 2.30e-39 | 150 |
| Msa0480220 | MtrunA17_Chr8g0351151 | 25.448 | 279 | 177 | 5 | 53 | 324 | 368 | 622 | 9.78e-21 | 95.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0480220 | AT2G39740.3 | 45.010 | 511 | 240 | 7 | 1 | 473 | 1 | 508 | 1.13e-138 | 409 |
| Msa0480220 | AT2G39740.2 | 45.010 | 511 | 240 | 7 | 1 | 473 | 1 | 508 | 1.13e-138 | 409 |
| Msa0480220 | AT2G39740.1 | 45.010 | 511 | 240 | 7 | 1 | 473 | 1 | 508 | 1.13e-138 | 409 |
| Msa0480220 | AT3G45750.1 | 31.627 | 332 | 191 | 11 | 1 | 320 | 35 | 342 | 8.05e-35 | 138 |
| Msa0480220 | AT3G45750.4 | 33.213 | 277 | 158 | 8 | 49 | 320 | 13 | 267 | 8.95e-32 | 129 |
| Msa0480220 | AT3G45750.3 | 33.213 | 277 | 158 | 8 | 49 | 320 | 13 | 267 | 8.95e-32 | 129 |
| Msa0480220 | AT3G45750.5 | 33.213 | 277 | 158 | 8 | 49 | 320 | 8 | 262 | 9.74e-32 | 129 |
| Msa0480220 | AT3G45750.2 | 29.831 | 295 | 152 | 8 | 59 | 320 | 2 | 274 | 3.01e-25 | 109 |
| Msa0480220 | AT3G45760.1 | 34.184 | 196 | 117 | 4 | 20 | 207 | 56 | 247 | 6.94e-25 | 107 |
| Msa0480220 | AT2G45620.1 | 26.480 | 321 | 197 | 11 | 14 | 324 | 441 | 732 | 1.02e-22 | 102 |
| Msa0480220 | AT3G45760.2 | 31.754 | 211 | 117 | 5 | 20 | 207 | 56 | 262 | 1.84e-21 | 97.1 |
Find 156 sgRNAs with CRISPR-Local
Find 576 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGTAATATTAATATAAT+TGG | 0.117709 | 3_3:+85411266 | None:intergenic |
| ATTAATATTACTTGACATTT+TGG | 0.135884 | 3_3:-85411258 | Msa0480220:three_prime_UTR |
| ATATACTCCCTTCTGTATTT+TGG | 0.139179 | 3_3:+85411428 | None:intergenic |
| GTTGATCCAAAGCAAGAATT+TGG | 0.179756 | 3_3:+85413844 | None:intergenic |
| GCACCATTGGAGCTTGCTTC+TGG | 0.221452 | 3_3:+85411566 | None:intergenic |
| ATTTCAATCCAGTTATTAAA+TGG | 0.239451 | 3_3:-85414518 | Msa0480220:CDS |
| CAAACCATTGTCGTTACTAT+TGG | 0.241497 | 3_3:-85416782 | Msa0480220:five_prime_UTR |
| GCAGGCCTGACATTATAATT+TGG | 0.250450 | 3_3:+85411764 | None:intergenic |
| GCAGGCCTGACATTATAATT+TGG | 0.250450 | 3_3:+85411791 | None:intergenic |
| TTTGGCTATGCCATTGGATT+TGG | 0.252709 | 3_3:+85411446 | None:intergenic |
| TTATTAAATGGTTCCCATAT+TGG | 0.255975 | 3_3:-85414506 | Msa0480220:CDS |
| TGGATTTGGAGGCGGGAAAA+AGG | 0.259074 | 3_3:+85418783 | None:intergenic |
| GAGTAACCTCCGTTGTAATT+TGG | 0.260290 | 3_3:+85411737 | None:intergenic |
| TTTCATTCATTCGTTGGATT+TGG | 0.260347 | 3_3:+85418769 | None:intergenic |
| ACGAATATTGCGTAAGTCTT+AGG | 0.260604 | 3_3:+85412161 | None:intergenic |
| TTCTCCCAGCAGATCCAATA+TGG | 0.262095 | 3_3:+85414492 | None:intergenic |
| GCCATTGGATTTGGAGCCTT+TGG | 0.273300 | 3_3:+85411455 | None:intergenic |
| TATGGGAACCATTTAATAAC+TGG | 0.283717 | 3_3:+85414510 | None:intergenic |
| GAAAAGCAAATCAAGTTGTT+TGG | 0.303324 | 3_3:+85411155 | None:intergenic |
| ATTGACATCACCGGATTTCT+TGG | 0.328506 | 3_3:-85411342 | Msa0480220:three_prime_UTR |
| ACTTGTAATCTTCCACCTTC+AGG | 0.329990 | 3_3:-85413619 | Msa0480220:intron |
| TGAAATCCAAATTCTTGCTT+TGG | 0.332807 | 3_3:-85413850 | Msa0480220:CDS |
| GGGGCAACTGTTGAACCATT+TGG | 0.345887 | 3_3:-85414584 | Msa0480220:CDS |
| TTCAGTGGTGGTAAAATTGC+AGG | 0.348532 | 3_3:+85412985 | None:intergenic |
| AATTCTTGCTTTGGATCAAC+AGG | 0.354600 | 3_3:-85413841 | Msa0480220:CDS |
| TTGCTTTGAAGTTGCACCAT+TGG | 0.359043 | 3_3:+85411553 | None:intergenic |
| AGTATAGTGCTACTATTATA+AGG | 0.364928 | 3_3:-85411106 | Msa0480220:three_prime_UTR |
| AAACCATTGTCGTTACTATT+GGG | 0.372987 | 3_3:-85416781 | Msa0480220:five_prime_UTR |
| TGAAAATGGCGCTGTGACTT+TGG | 0.373072 | 3_3:+85411665 | None:intergenic |
| GAATTCTCCGGTTGCTCAAA+AGG | 0.373262 | 3_3:+85411968 | None:intergenic |
| TACTATTATAAGGTTAATTA+CGG | 0.374019 | 3_3:-85411096 | Msa0480220:three_prime_UTR |
| GGGCAACTGTTGAACCATTT+GGG | 0.387693 | 3_3:-85414583 | Msa0480220:CDS |
| CCCCTTTGCCCCTGTGGCTG+TGG | 0.388907 | 3_3:+85411701 | None:intergenic |
| AAAAGCAAATCAAGTTGTTT+GGG | 0.390073 | 3_3:+85411156 | None:intergenic |
| CTTTGGATCAACAGGATAGA+TGG | 0.392570 | 3_3:-85413833 | Msa0480220:CDS |
| GTGAACAAAATGAAAGCAAT+AGG | 0.394326 | 3_3:+85416814 | None:intergenic |
| GAAAATGGCGCTGTGACTTT+GGG | 0.396112 | 3_3:+85411666 | None:intergenic |
| CCTGTTTATGTTGGCAGCAC+AGG | 0.397035 | 3_3:+85412641 | None:intergenic |
| CATTCATTCGTTGGATTTGG+AGG | 0.402202 | 3_3:+85418772 | None:intergenic |
| AGCTCATCCACCATATTGTA+AGG | 0.409258 | 3_3:+85412952 | None:intergenic |
| TTCTTGGGTTACAAGTCAAT+TGG | 0.411463 | 3_3:-85411326 | Msa0480220:three_prime_UTR |
| AGATATATACCCTTACAATA+TGG | 0.416235 | 3_3:-85412962 | Msa0480220:CDS |
| ATGAATTCACATAGTATGTT+GGG | 0.416556 | 3_3:-85416739 | Msa0480220:CDS |
| CAAGTAATATTAATATAATT+GGG | 0.417483 | 3_3:+85411267 | None:intergenic |
| CCTGTGCTGCCAACATAAAC+AGG | 0.419476 | 3_3:-85412641 | Msa0480220:CDS |
| GGTTCCCATATTGGATCTGC+TGG | 0.419616 | 3_3:-85414497 | Msa0480220:CDS |
| AGATGGCCGCTTTCATGATC+TGG | 0.422107 | 3_3:-85413816 | Msa0480220:CDS |
| ATCGGAATTTGCACTTATAG+TGG | 0.425285 | 3_3:-85412221 | Msa0480220:CDS |
| ATCTAATCTCTTCACGCGAT+GGG | 0.429598 | 3_3:-85414552 | Msa0480220:CDS |
| AACAAAGTAGATTCAATGAT+AGG | 0.429828 | 3_3:-85418954 | None:intergenic |
| AAGATAGCTGAAGCATTTGT+AGG | 0.434109 | 3_3:-85411914 | Msa0480220:CDS |
| GGTCTCCATGCCTGCTGCTG+TGG | 0.439622 | 3_3:+85411476 | None:intergenic |
| ACATTATAATTTGGAATGGC+AGG | 0.441132 | 3_3:+85411773 | None:intergenic |
| TGACACCCTCACAAGAAGAT+TGG | 0.441842 | 3_3:-85416687 | Msa0480220:CDS |
| CATTCGTTGGATTTGGAGGC+GGG | 0.449731 | 3_3:+85418776 | None:intergenic |
| ACATTATAATTTGGAATGAC+AGG | 0.451404 | 3_3:+85411800 | None:intergenic |
| TTGACATCACCGGATTTCTT+GGG | 0.452702 | 3_3:-85411341 | Msa0480220:three_prime_UTR |
| ACGTCAAGGTCCACAGCAGC+AGG | 0.452998 | 3_3:-85411486 | Msa0480220:CDS |
| CTCAAAGCTTTGAGGATGAA+AGG | 0.453423 | 3_3:-85414440 | Msa0480220:intron |
| GACTTGTAACCCAAGAAATC+CGG | 0.461842 | 3_3:+85411332 | None:intergenic |
| TTGCTTTGACGTTGAACCGT+TGG | 0.465095 | 3_3:+85411619 | None:intergenic |
| TCCACAGCCACAGGGGCAAA+GGG | 0.474201 | 3_3:-85411702 | Msa0480220:CDS |
| AATGAATTCACATAGTATGT+TGG | 0.475354 | 3_3:-85416740 | Msa0480220:CDS |
| ACAGATCTTGCTGAATTCTC+CGG | 0.480099 | 3_3:+85411956 | None:intergenic |
| CCCTGTGGCTGTGGATGAGT+TGG | 0.480768 | 3_3:+85411710 | None:intergenic |
| CTTCACGCGATGGGGTGACT+TGG | 0.482241 | 3_3:-85414543 | Msa0480220:CDS |
| ATGTGTGGAGTCTTATTGCC+AGG | 0.486616 | 3_3:-85411823 | Msa0480220:CDS |
| TGGATTTGAAGTTGCACCGT+TGG | 0.490464 | 3_3:+85411586 | None:intergenic |
| TCATTCCAAATTATAATGTC+AGG | 0.492163 | 3_3:-85411796 | Msa0480220:CDS |
| GTTTCGATCAATAACCTGTC+GGG | 0.493275 | 3_3:-85413878 | Msa0480220:CDS |
| GACACCCTCACAAGAAGATT+GGG | 0.493660 | 3_3:-85416686 | Msa0480220:CDS |
| CCGTTGTAATTTGGAATGGC+AGG | 0.493742 | 3_3:+85411746 | None:intergenic |
| TAGAATGGGAACTCTTGCAC+TGG | 0.495619 | 3_3:+85413937 | None:intergenic |
| GGGTCTTGTGGATTAAAGGA+TGG | 0.498344 | 3_3:-85411293 | Msa0480220:three_prime_UTR |
| CATCACAAGATATGCCTTGT+CGG | 0.498345 | 3_3:+85413900 | None:intergenic |
| TCCAACTCATCCACAGCCAC+AGG | 0.499353 | 3_3:-85411711 | Msa0480220:CDS |
| AGTTTGCTCAGATCGATGAA+TGG | 0.499446 | 3_3:-85412253 | Msa0480220:CDS |
| CCATTCCAAATTATAATGTC+AGG | 0.499895 | 3_3:-85411769 | Msa0480220:CDS |
| GGACCTTGACGTGCTTTAGC+AGG | 0.501971 | 3_3:+85411497 | None:intergenic |
| TACTGTTGAAGTTGCACCGT+TGG | 0.503215 | 3_3:+85411520 | None:intergenic |
| GATGAATGGGCCTCAGAGAT+CGG | 0.505210 | 3_3:-85412239 | Msa0480220:CDS |
| GTTTGCTCAGATCGATGAAT+GGG | 0.505286 | 3_3:-85412252 | Msa0480220:CDS |
| TGGATTTCATCAAGCCCGAC+AGG | 0.505327 | 3_3:+85413864 | None:intergenic |
| GTTCTTCTTTGTACTTTGAA+AGG | 0.511867 | 3_3:+85418819 | None:intergenic |
| ACAAGAAGAGGAAGAAGAAG+TGG | 0.512509 | 3_3:+85418885 | None:intergenic |
| ATAAGACTCCACACATGTGC+TGG | 0.513868 | 3_3:+85411830 | None:intergenic |
| CACAAGAAGATTGGGAGATA+CGG | 0.514003 | 3_3:-85416678 | Msa0480220:CDS |
| TATCTAATCTCTTCACGCGA+TGG | 0.514198 | 3_3:-85414553 | Msa0480220:CDS |
| AAGCATTATTCAACAAGAAG+AGG | 0.514482 | 3_3:+85418873 | None:intergenic |
| TCTCCCAGCAGATCCAATAT+GGG | 0.515355 | 3_3:+85414493 | None:intergenic |
| AATCCAACGAATGAATGAAA+AGG | 0.519103 | 3_3:-85418766 | Msa0480220:intron |
| AAAATCAATAACTCTAAGAC+TGG | 0.521420 | 3_3:-85413669 | Msa0480220:CDS |
| ATCCACAGCCACAGGGGCAA+AGG | 0.533541 | 3_3:-85411703 | Msa0480220:CDS |
| AACACGCCCCTTTGCCCCTG+TGG | 0.533905 | 3_3:+85411695 | None:intergenic |
| TATCTCCCAATCTTCTTGTG+AGG | 0.539767 | 3_3:+85416681 | None:intergenic |
| ATCTCCCAATCTTCTTGTGA+GGG | 0.540615 | 3_3:+85416682 | None:intergenic |
| CCTGACATTATAATTTGGAA+TGG | 0.541392 | 3_3:+85411769 | None:intergenic |
| AGATAGCTGAAGCATTTGTA+GGG | 0.542347 | 3_3:-85411913 | Msa0480220:CDS |
| TCATTCGTTGGATTTGGAGG+CGG | 0.547535 | 3_3:+85418775 | None:intergenic |
| ACCTCCGTTGTAATTTGGAA+TGG | 0.548068 | 3_3:+85411742 | None:intergenic |
| ATAATTTGGAATGACAGGCC+TGG | 0.551278 | 3_3:+85411805 | None:intergenic |
| AGAATGGGAACTCTTGCACT+GGG | 0.553145 | 3_3:+85413938 | None:intergenic |
| CTTTCATGATCTGGTTGTAG+TGG | 0.556570 | 3_3:-85413807 | Msa0480220:intron |
| AGGCAAGGTGCAAGCTCCAA+CGG | 0.557349 | 3_3:-85411635 | Msa0480220:CDS |
| TGGCGCTGTGACTTTGGGTG+TGG | 0.559483 | 3_3:+85411671 | None:intergenic |
| AATCCAGAAGCAAGCTCCAA+TGG | 0.560044 | 3_3:-85411569 | Msa0480220:CDS |
| GGTTCATATCAAACAAGTCC+AGG | 0.565404 | 3_3:-85412620 | Msa0480220:CDS |
| TTAGATACAACTGACCCAAA+TGG | 0.566089 | 3_3:+85414569 | None:intergenic |
| AAGGTCCACAGCAGCAGGCA+TGG | 0.568937 | 3_3:-85411481 | Msa0480220:CDS |
| TACAAGTAAACTGAGCGTAA+AGG | 0.573483 | 3_3:+85413635 | None:intergenic |
| AGCAGAGAGGTACCTGAAGG+TGG | 0.574822 | 3_3:+85413607 | None:intergenic |
| AACGGTTCAACGTCAAAGCA+AGG | 0.580256 | 3_3:-85411617 | Msa0480220:CDS |
| TGATATGAACCTGTTTATGT+TGG | 0.580786 | 3_3:+85412632 | None:intergenic |
| TGGCATAGCCAAAATACAGA+AGG | 0.582933 | 3_3:-85411436 | Msa0480220:exon |
| GAGAATTCAGCAAGATCTGT+CGG | 0.588586 | 3_3:-85411953 | Msa0480220:CDS |
| TGTTTCGATCAATAACCTGT+CGG | 0.592217 | 3_3:-85413879 | Msa0480220:CDS |
| AGATAAAGAACAACATGAGA+TGG | 0.594320 | 3_3:-85412187 | Msa0480220:CDS |
| TTGCACTTATAGTGGACAGT+GGG | 0.595106 | 3_3:-85412213 | Msa0480220:CDS |
| TATATACCCTTACAATATGG+TGG | 0.595530 | 3_3:-85412959 | Msa0480220:CDS |
| AAGCAAGGAGCAAGCTCCAA+CGG | 0.597196 | 3_3:-85411536 | Msa0480220:CDS |
| TTTACCTCTCAGACTCTCCA+CGG | 0.597748 | 3_3:+85416618 | None:intergenic |
| ATAGAAGTAATTGACATCAC+CGG | 0.600819 | 3_3:-85411351 | Msa0480220:three_prime_UTR |
| AATGGTGCAACTTCAAAGCA+AGG | 0.601932 | 3_3:-85411551 | Msa0480220:CDS |
| TGCTCCAGCAGGGATTTCAA+AGG | 0.605624 | 3_3:-85416881 | Msa0480220:intron |
| ACCAAAGGCTCCAAATCCAA+TGG | 0.605670 | 3_3:-85411456 | Msa0480220:CDS |
| GGCTTGTGTAGGTGAAGGAG+TGG | 0.608531 | 3_3:-85413704 | Msa0480220:intron |
| GGCGCTGTGACTTTGGGTGT+GGG | 0.610172 | 3_3:+85411672 | None:intergenic |
| CAAGAAGAGGAAGAAGAAGT+GGG | 0.610604 | 3_3:+85418886 | None:intergenic |
| TTTAACTGATATACTTCGGA+CGG | 0.611571 | 3_3:-85416710 | Msa0480220:CDS |
| TAAGGGTATATATCTTTCAG+TGG | 0.614153 | 3_3:+85412970 | None:intergenic |
| GCGAAGCGCTGCTGAATCCG+TGG | 0.618401 | 3_3:-85416635 | Msa0480220:CDS |
| CAGGGATTTCAAAGGACATG+AGG | 0.622231 | 3_3:-85416873 | Msa0480220:five_prime_UTR |
| GTTCCCATATTGGATCTGCT+GGG | 0.628264 | 3_3:-85414496 | Msa0480220:CDS |
| GCTCATCCACCATATTGTAA+GGG | 0.628670 | 3_3:+85412953 | None:intergenic |
| CCACAGCCACAGGGGCAAAG+GGG | 0.634379 | 3_3:-85411701 | Msa0480220:CDS |
| GGCATAGCCAAAATACAGAA+GGG | 0.637529 | 3_3:-85411435 | Msa0480220:exon |
| TCTAATCTCTTCACGCGATG+GGG | 0.638369 | 3_3:-85414551 | Msa0480220:CDS |
| CCAACTCATCCACAGCCACA+GGG | 0.638903 | 3_3:-85411710 | Msa0480220:CDS |
| GCCATTCCAAATTACAACGG+AGG | 0.642837 | 3_3:-85411743 | Msa0480220:CDS |
| GGGTATATATCTTTCAGTGG+TGG | 0.645534 | 3_3:+85412973 | None:intergenic |
| AAGCAAGGAGCAAACTCCAA+CGG | 0.656235 | 3_3:-85411602 | Msa0480220:CDS |
| GCAGCAGGCATGGAGACCAA+AGG | 0.664174 | 3_3:-85411471 | Msa0480220:CDS |
| CTACAACCAGATCATGAAAG+CGG | 0.665942 | 3_3:+85413810 | None:intergenic |
| AGTTAGCACCAGCACATGTG+TGG | 0.666847 | 3_3:-85411838 | Msa0480220:CDS |
| TTTGCACTTATAGTGGACAG+TGG | 0.675119 | 3_3:-85412214 | Msa0480220:CDS |
| GTACCTGCTAAAGCACGTCA+AGG | 0.675311 | 3_3:-85411500 | Msa0480220:CDS |
| GAATGGGAACTCTTGCACTG+GGG | 0.677287 | 3_3:+85413939 | None:intergenic |
| GCTTGTGTAGGTGAAGGAGT+GGG | 0.679102 | 3_3:-85413703 | Msa0480220:intron |
| AAATTTAAAAGTGTCCGACA+AGG | 0.680098 | 3_3:-85413914 | Msa0480220:CDS |
| TGAAAGGAAGAAGTGTTGTG+TGG | 0.681060 | 3_3:+85418835 | None:intergenic |
| GAATCCGTGGAGAGTCTGAG+AGG | 0.687013 | 3_3:-85416622 | Msa0480220:intron |
| ACTCCCAATAGTAACGACAA+TGG | 0.703130 | 3_3:+85416778 | None:intergenic |
| CAACTCATCCACAGCCACAG+GGG | 0.708530 | 3_3:-85411709 | Msa0480220:CDS |
| CCTGCCATTCCAAATTACAA+CGG | 0.708652 | 3_3:-85411746 | Msa0480220:CDS |
| AGTGCAAATTCCGATCTCTG+AGG | 0.715212 | 3_3:+85412229 | None:intergenic |
| AATATGGTGGATGAGCTGAG+AGG | 0.762740 | 3_3:-85412946 | Msa0480220:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATACTAATATTTTCATTT+TGG | - | chr3_3:85414214-85414233 | Msa0480220:intron | 10.0% |
| !! | AAAAAAAAAAATCTAAAGAA+TGG | - | chr3_3:85415122-85415141 | Msa0480220:intron | 10.0% |
| !!! | AAATAGTTTTTAAAATTACT+AGG | + | chr3_3:85415890-85415909 | None:intergenic | 10.0% |
| !!! | ATCATTTAAGTTATTTATTT+AGG | - | chr3_3:85416571-85416590 | Msa0480220:intron | 10.0% |
| !! | CAAGTAATATTAATATAATT+GGG | + | chr3_3:85418779-85418798 | None:intergenic | 10.0% |
| !! | TCAAGTAATATTAATATAAT+TGG | + | chr3_3:85418780-85418799 | None:intergenic | 10.0% |
| !!! | TTCAATATTGATTATCTTTT+TGG | - | chr3_3:85411552-85411571 | Msa0480220:CDS | 15.0% |
| !!! | TCAATATTGATTATCTTTTT+GGG | - | chr3_3:85411553-85411572 | Msa0480220:CDS | 15.0% |
| !! | ATTCATATAAAAACCTATTA+AGG | + | chr3_3:85411840-85411859 | None:intergenic | 15.0% |
| !! | TATTAAATCAAGTTACAATT+CGG | + | chr3_3:85411948-85411967 | None:intergenic | 15.0% |
| !! | TGTAACTTGATTTAATATTT+CGG | - | chr3_3:85411951-85411970 | Msa0480220:CDS | 15.0% |
| !! | TTACAAGGAATATATATAAA+GGG | + | chr3_3:85412589-85412608 | None:intergenic | 15.0% |
| !! | ATTACAAGGAATATATATAA+AGG | + | chr3_3:85412590-85412609 | None:intergenic | 15.0% |
| !! | AGATAAAGGAAAAATTATAT+AGG | + | chr3_3:85414851-85414870 | None:intergenic | 15.0% |
| !! | TCTTAATTTCCATTATTTAT+TGG | + | chr3_3:85415204-85415223 | None:intergenic | 15.0% |
| !!! | ACACTTTTAAATTTTAGAAT+GGG | + | chr3_3:85416123-85416142 | None:intergenic | 15.0% |
| !!! | ATTAATATTACTTGACATTT+TGG | - | chr3_3:85418785-85418804 | Msa0480220:five_prime_UTR | 15.0% |
| !! | TCGGTGAAAAATAAATATAA+GGG | + | chr3_3:85411472-85411491 | None:intergenic | 20.0% |
| !! | ATCGGTGAAAAATAAATATA+AGG | + | chr3_3:85411473-85411492 | None:intergenic | 20.0% |
| !!! | TGTGATTTCTTTTTTAGTTA+TGG | - | chr3_3:85411641-85411660 | Msa0480220:CDS | 20.0% |
| !!! | GTGATTTCTTTTTTAGTTAT+GGG | - | chr3_3:85411642-85411661 | Msa0480220:CDS | 20.0% |
| !!! | GAATTGGTTTGAAAAAAAAT+TGG | - | chr3_3:85411676-85411695 | Msa0480220:CDS | 20.0% |
| !! | TTTATATGAATTTATGAGAG+AGG | - | chr3_3:85411849-85411868 | Msa0480220:CDS | 20.0% |
| !! | ATTAAATCAAGTTACAATTC+GGG | + | chr3_3:85411947-85411966 | None:intergenic | 20.0% |
| !! | GTTCAAAATATTAAGGATAA+CGG | - | chr3_3:85411975-85411994 | Msa0480220:CDS | 20.0% |
| !! | TTAAAAATTAATGAACCGTA+TGG | + | chr3_3:85412196-85412215 | None:intergenic | 20.0% |
| !! | AATTTATATTTAAACCATGC+AGG | + | chr3_3:85412227-85412246 | None:intergenic | 20.0% |
| !! | TGGTTTAAATATAAATTGAG+TGG | - | chr3_3:85412230-85412249 | Msa0480220:CDS | 20.0% |
| !! | GGTTTAAATATAAATTGAGT+GGG | - | chr3_3:85412231-85412250 | Msa0480220:CDS | 20.0% |
| !! | GTTTAAATATAAATTGAGTG+GGG | - | chr3_3:85412232-85412251 | Msa0480220:CDS | 20.0% |
| !! | TTTAAATATAAATTGAGTGG+GGG | - | chr3_3:85412233-85412252 | Msa0480220:CDS | 20.0% |
| !! | TACAAGGAATATATATAAAG+GGG | + | chr3_3:85412588-85412607 | None:intergenic | 20.0% |
| !! | AAACACAACATTACAAAATT+AGG | + | chr3_3:85412831-85412850 | None:intergenic | 20.0% |
| !!! | TTGTTTTAACTGATATACTT+CGG | - | chr3_3:85413329-85413348 | Msa0480220:intron | 20.0% |
| !! | CTAAAGATAAGTAAGATAAA+AGG | - | chr3_3:85413509-85413528 | Msa0480220:intron | 20.0% |
| !! | GAATTGATATTCCATAAAAA+TGG | - | chr3_3:85413541-85413560 | Msa0480220:intron | 20.0% |
| !! | GTTCGAACAAAAAAAATATT+GGG | + | chr3_3:85413897-85413916 | None:intergenic | 20.0% |
| !! | AGTTCGAACAAAAAAAATAT+TGG | + | chr3_3:85413898-85413917 | None:intergenic | 20.0% |
| !!! | GTATTTTTTTTTTGTAGACT+TGG | - | chr3_3:85414054-85414073 | Msa0480220:intron | 20.0% |
| !!! | TTTATTTGCGTAGTTTTTTT+GGG | - | chr3_3:85414087-85414106 | Msa0480220:intron | 20.0% |
| !!! | GTTTTTTTTTTTTATGGACT+TGG | - | chr3_3:85414155-85414174 | Msa0480220:intron | 20.0% |
| !!! | ACTAATATTTTCATTTTGGT+TGG | - | chr3_3:85414218-85414237 | Msa0480220:intron | 20.0% |
| !! | TATTGTTTGATATTCATGTA+TGG | - | chr3_3:85414786-85414805 | Msa0480220:intron | 20.0% |
| !! | CTCATAAATAATCTAAAGAA+TGG | - | chr3_3:85415011-85415030 | Msa0480220:intron | 20.0% |
| !!! | TTAAAATTGCACTCAATTTT+TGG | - | chr3_3:85415432-85415451 | Msa0480220:intron | 20.0% |
| !! | ATTTCAATCCAGTTATTAAA+TGG | - | chr3_3:85415525-85415544 | Msa0480220:intron | 20.0% |
| !!! | TTCCAAATTTTAAAAGGTAA+CGG | + | chr3_3:85415685-85415704 | None:intergenic | 20.0% |
| !!! | TTTTTAAATTTAGGAGAATC+AGG | + | chr3_3:85415738-85415757 | None:intergenic | 20.0% |
| !!! | AGTTTTTAAAATTACTAGGA+AGG | + | chr3_3:85415886-85415905 | None:intergenic | 20.0% |
| !! | TATAACCATAATTAGCAAAA+AGG | - | chr3_3:85415990-85416009 | Msa0480220:intron | 20.0% |
| !!! | GACACTTTTAAATTTTAGAA+TGG | + | chr3_3:85416124-85416143 | None:intergenic | 20.0% |
| !!! | TTTTATTGATTTCCAAAGAA+AGG | - | chr3_3:85417475-85417494 | Msa0480220:intron | 20.0% |
| !!! | AATTGGAATTTTAACAGATT+AGG | + | chr3_3:85417628-85417647 | None:intergenic | 20.0% |
| !! | TTAATGAAAAGCAAACAATA+TGG | - | chr3_3:85417678-85417697 | Msa0480220:intron | 20.0% |
| !!! | TCTTGTATTTGAATTTTACT+TGG | - | chr3_3:85418039-85418058 | Msa0480220:intron | 20.0% |
| !!! | TATTTGAATTTTACTTGGTT+AGG | - | chr3_3:85418044-85418063 | Msa0480220:intron | 20.0% |
| !!! | TTTCATAGTGTACCTTTTTT+GGG | + | chr3_3:85411115-85411134 | None:intergenic | 25.0% |
| ! | GTCATTGCTAAAATTGAAAT+TGG | + | chr3_3:85411450-85411469 | None:intergenic | 25.0% |
| !!! | TCTTTTTTAGTTATGGGATT+AGG | - | chr3_3:85411648-85411667 | Msa0480220:CDS | 25.0% |
| !! | TTGTGTAATTCTGTGATTTT+TGG | - | chr3_3:85411703-85411722 | Msa0480220:CDS | 25.0% |
| !! | TAGTTAGAAGATGTTTTCAT+AGG | - | chr3_3:85411754-85411773 | Msa0480220:CDS | 25.0% |
| ! | ATATAAAAACCTATTAAGGC+TGG | + | chr3_3:85411836-85411855 | None:intergenic | 25.0% |
| ! | AGTATCAACACTATTTGATA+GGG | + | chr3_3:85411888-85411907 | None:intergenic | 25.0% |
| ! | AAGTATCAACACTATTTGAT+AGG | + | chr3_3:85411889-85411908 | None:intergenic | 25.0% |
| !!! | TATCAAATAGTGTTGATACT+TGG | - | chr3_3:85411888-85411907 | Msa0480220:CDS | 25.0% |
| ! | TTTCGGAGTTCAAAATATTA+AGG | - | chr3_3:85411968-85411987 | Msa0480220:CDS | 25.0% |
| !! | AAAATATTAAGGATAACGGT+GGG | - | chr3_3:85411979-85411998 | Msa0480220:CDS | 25.0% |
| ! | TATTCTTTGTAATGTTGAAC+CGG | - | chr3_3:85412020-85412039 | Msa0480220:intron | 25.0% |
| !! | GATTGTGGATTATATGTATT+AGG | - | chr3_3:85412425-85412444 | Msa0480220:intron | 25.0% |
| !! | AAATGCAAACAGATTTTACA+TGG | + | chr3_3:85412738-85412757 | None:intergenic | 25.0% |
| ! | CCTATAATCAATAAATGACA+TGG | + | chr3_3:85412874-85412893 | None:intergenic | 25.0% |
| !! | CCATGTCATTTATTGATTAT+AGG | - | chr3_3:85412871-85412890 | Msa0480220:intron | 25.0% |
| ! | CGATGTTTATTTCGTATTTA+GGG | + | chr3_3:85412934-85412953 | None:intergenic | 25.0% |
| ! | ACGATGTTTATTTCGTATTT+AGG | + | chr3_3:85412935-85412954 | None:intergenic | 25.0% |
| ! | AATGAATTCACATAGTATGT+TGG | - | chr3_3:85413303-85413322 | Msa0480220:intron | 25.0% |
| ! | ATGAATTCACATAGTATGTT+GGG | - | chr3_3:85413304-85413323 | Msa0480220:intron | 25.0% |
| ! | CTAATCAAGTTCTACATTTA+AGG | + | chr3_3:85413475-85413494 | None:intergenic | 25.0% |
| ! | CTTAAATGTAGAACTTGATT+AGG | - | chr3_3:85413473-85413492 | Msa0480220:intron | 25.0% |
| ! | TGATATTCCATAAAAATGGA+AGG | - | chr3_3:85413545-85413564 | Msa0480220:intron | 25.0% |
| ! | TATTTATATTACGATGCCTA+TGG | - | chr3_3:85413577-85413596 | Msa0480220:intron | 25.0% |
| ! | ACCTTAAAAGCTAATTTGAT+TGG | - | chr3_3:85413622-85413641 | Msa0480220:CDS | 25.0% |
| !!! | TCCAATCAAATTAGCTTTTA+AGG | + | chr3_3:85413626-85413645 | None:intergenic | 25.0% |
| !! | GATGGTTTCAAAATTGTTTT+TGG | - | chr3_3:85413777-85413796 | Msa0480220:intron | 25.0% |
| !!! | GTTTATTTGCGTAGTTTTTT+TGG | - | chr3_3:85414086-85414105 | Msa0480220:intron | 25.0% |
| !!! | TTATTTGCGTAGTTTTTTTG+GGG | - | chr3_3:85414088-85414107 | Msa0480220:intron | 25.0% |
| !!! | AGTTTTATAGCATATGTTCT+AGG | - | chr3_3:85414413-85414432 | Msa0480220:intron | 25.0% |
| ! | CATGAATATCAAACAATAGA+AGG | + | chr3_3:85414784-85414803 | None:intergenic | 25.0% |
| ! | AAGGTTTCTCCAATAAATAA+TGG | - | chr3_3:85415192-85415211 | Msa0480220:intron | 25.0% |
| ! | TAACACATTTGTTTCAAAGT+TGG | + | chr3_3:85415297-85415316 | None:intergenic | 25.0% |
| ! | ATACAGAGTATAAAACTTCA+TGG | + | chr3_3:85415330-85415349 | None:intergenic | 25.0% |
| ! | GTATGAAGTTGTCTTATAAT+AGG | - | chr3_3:85415346-85415365 | Msa0480220:intron | 25.0% |
| ! | TTATTAAATGGTTCCCATAT+TGG | - | chr3_3:85415537-85415556 | Msa0480220:intron | 25.0% |
| !! | TAAATTTTCTCAAAGCTTTG+AGG | - | chr3_3:85415595-85415614 | Msa0480220:intron | 25.0% |
| !!! | ATCCGTTACCTTTTAAAATT+TGG | - | chr3_3:85415680-85415699 | Msa0480220:intron | 25.0% |
| !! | CCTCATTTCCAAATTTTAAA+AGG | + | chr3_3:85415691-85415710 | None:intergenic | 25.0% |
| !!! | CCTTTTAAAATTTGGAAATG+AGG | - | chr3_3:85415688-85415707 | Msa0480220:intron | 25.0% |
| ! | AAATAATACATGCACCAAAT+GGG | - | chr3_3:85415761-85415780 | Msa0480220:intron | 25.0% |
| !!! | TATAGAGCTCTAAAATCTAT+AGG | + | chr3_3:85415926-85415945 | None:intergenic | 25.0% |
| !!! | GTTATTGATTTTATGTGCTT+TGG | + | chr3_3:85416366-85416385 | None:intergenic | 25.0% |
| !!! | AAAATCAATAACTCTAAGAC+TGG | - | chr3_3:85416374-85416393 | Msa0480220:intron | 25.0% |
| ! | ACAGACAAAACATATTAAAG+CGG | + | chr3_3:85416959-85416978 | None:intergenic | 25.0% |
| !! | CTTTAATATGTTTTGTCTGT+TGG | - | chr3_3:85416959-85416978 | Msa0480220:intron | 25.0% |
| ! | AGATATATACCCTTACAATA+TGG | - | chr3_3:85417081-85417100 | Msa0480220:intron | 25.0% |
| ! | GGTTATATAAGAACTGATAA+TGG | + | chr3_3:85417322-85417341 | None:intergenic | 25.0% |
| ! | TGGAAATCAATAAAAAGTTC+AGG | + | chr3_3:85417470-85417489 | None:intergenic | 25.0% |
| ! | GAGAAAAATTTACCTTTCTT+TGG | + | chr3_3:85417490-85417509 | None:intergenic | 25.0% |
| ! | GTAAATAAAAAATGCCAAGA+GGG | + | chr3_3:85417738-85417757 | None:intergenic | 25.0% |
| ! | AGTAAATAAAAAATGCCAAG+AGG | + | chr3_3:85417739-85417758 | None:intergenic | 25.0% |
| !! | ACATTATAATTTGGAATGAC+AGG | + | chr3_3:85418246-85418265 | None:intergenic | 25.0% |
| ! | TCATTCCAAATTATAATGTC+AGG | - | chr3_3:85418247-85418266 | Msa0480220:intron | 25.0% |
| !! | AAGTCAATTGGCATAATTTT+TGG | - | chr3_3:85418729-85418748 | Msa0480220:intron | 25.0% |
| !! | AGTCAATTGGCATAATTTTT+GGG | - | chr3_3:85418730-85418749 | Msa0480220:intron | 25.0% |
| !! | AATATTACTTGACATTTTGG+CGG | - | chr3_3:85418788-85418807 | Msa0480220:five_prime_UTR | 25.0% |
| !! | AAAAGCAAATCAAGTTGTTT+GGG | + | chr3_3:85418890-85418909 | None:intergenic | 25.0% |
| !! | AGTATAGTGCTACTATTATA+AGG | - | chr3_3:85418937-85418956 | Msa0480220:five_prime_UTR | 25.0% |
| !!! | CTTTCATAGTGTACCTTTTT+TGG | + | chr3_3:85411116-85411135 | None:intergenic | 30.0% |
| AAGCATTATTCAACAAGAAG+AGG | + | chr3_3:85411173-85411192 | None:intergenic | 30.0% | |
| GTTCTTCTTTGTACTTTGAA+AGG | + | chr3_3:85411227-85411246 | None:intergenic | 30.0% | |
| TTTCATTCATTCGTTGGATT+TGG | + | chr3_3:85411277-85411296 | None:intergenic | 30.0% | |
| AATCCAACGAATGAATGAAA+AGG | - | chr3_3:85411277-85411296 | Msa0480220:three_prime_UTR | 30.0% | |
| ! | TTACCTTTTCATTCATTCGT+TGG | + | chr3_3:85411283-85411302 | None:intergenic | 30.0% |
| TAAGTAACGTTACTCTTGTA+CGG | - | chr3_3:85411346-85411365 | Msa0480220:three_prime_UTR | 30.0% | |
| TTATTTAGGTGCTCTTTGAT+TGG | - | chr3_3:85411597-85411616 | Msa0480220:CDS | 30.0% | |
| !!! | TTTTTAGTTATGGGATTAGG+TGG | - | chr3_3:85411651-85411670 | Msa0480220:CDS | 30.0% |
| !!! | TTGGTCTTGTTTTTGTGTTT+TGG | - | chr3_3:85411722-85411741 | Msa0480220:CDS | 30.0% |
| TTTGTTCATAGATGAGATCA+AGG | - | chr3_3:85411795-85411814 | Msa0480220:CDS | 30.0% | |
| TATGAATTTATGAGAGAGGA+AGG | - | chr3_3:85411853-85411872 | Msa0480220:CDS | 30.0% | |
| GTATCAACACTATTTGATAG+GGG | + | chr3_3:85411887-85411906 | None:intergenic | 30.0% | |
| ! | CAAAATATTAAGGATAACGG+TGG | - | chr3_3:85411978-85411997 | Msa0480220:CDS | 30.0% |
| GAGAGTTTCTAAATTCTTTC+AGG | + | chr3_3:85412106-85412125 | None:intergenic | 30.0% | |
| ! | TTTTAATAATGTGACCTGCA+TGG | - | chr3_3:85412210-85412229 | Msa0480220:CDS | 30.0% |
| AGGAATATATATAAAGGGGT+TGG | + | chr3_3:85412584-85412603 | None:intergenic | 30.0% | |
| ! | CAAACAGATTTTACATGGTT+TGG | + | chr3_3:85412733-85412752 | None:intergenic | 30.0% |
| AACATTACAAAATTAGGAGG+AGG | + | chr3_3:85412825-85412844 | None:intergenic | 30.0% | |
| CACAACATTACAAAATTAGG+AGG | + | chr3_3:85412828-85412847 | None:intergenic | 30.0% | |
| CCTTCAAAATCAAATCTTGT+TGG | + | chr3_3:85413012-85413031 | None:intergenic | 30.0% | |
| !! | CCAACAAGATTTGATTTTGA+AGG | - | chr3_3:85413009-85413028 | Msa0480220:intron | 30.0% |
| TCCATGTAAATATTCATGTC+AGG | - | chr3_3:85413072-85413091 | Msa0480220:intron | 30.0% | |
| ACCTGACATGAATATTTACA+TGG | + | chr3_3:85413076-85413095 | None:intergenic | 30.0% | |
| GTGAACAAAATGAAAGCAAT+AGG | + | chr3_3:85413232-85413251 | None:intergenic | 30.0% | |
| AAACCATTGTCGTTACTATT+GGG | - | chr3_3:85413262-85413281 | Msa0480220:intron | 30.0% | |
| TTTAACTGATATACTTCGGA+CGG | - | chr3_3:85413333-85413352 | Msa0480220:intron | 30.0% | |
| ATCAAGTTCTACATTTAAGG+AGG | + | chr3_3:85413472-85413491 | None:intergenic | 30.0% | |
| !! | AGAGAATCCTTCCATTTTTA+TGG | + | chr3_3:85413555-85413574 | None:intergenic | 30.0% |
| CAGCAAAAATACTTATCCAT+AGG | + | chr3_3:85413596-85413615 | None:intergenic | 30.0% | |
| !! | CTATGGATAAGTATTTTTGC+TGG | - | chr3_3:85413594-85413613 | Msa0480220:intron | 30.0% |
| AATTTGATTGGATCAAACCA+AGG | - | chr3_3:85413634-85413653 | Msa0480220:CDS | 30.0% | |
| ATCTTGATAAGTGATAACCT+TGG | + | chr3_3:85413654-85413673 | None:intergenic | 30.0% | |
| TTCTTCATTTCAACTCAACT+GGG | + | chr3_3:85413873-85413892 | None:intergenic | 30.0% | |
| TTTCTTCATTTCAACTCAAC+TGG | + | chr3_3:85413874-85413893 | None:intergenic | 30.0% | |
| TCTTGTAAGTTTAGTAGGAT+CGG | + | chr3_3:85414295-85414314 | None:intergenic | 30.0% | |
| !! | ATCAAGATTTTGACCAAGAT+CGG | + | chr3_3:85414372-85414391 | None:intergenic | 30.0% |
| CTATAAAACTGTTTGATCCA+AGG | + | chr3_3:85414403-85414422 | None:intergenic | 30.0% | |
| !! | AAAGCTCTGAATAAAACAGA+GGG | + | chr3_3:85414660-85414679 | None:intergenic | 30.0% |
| TGTTTGATATTCATGTATGG+AGG | - | chr3_3:85414789-85414808 | Msa0480220:intron | 30.0% | |
| ! | TATGTTGTTTGCAGAGATAA+AGG | + | chr3_3:85414865-85414884 | None:intergenic | 30.0% |
| !! | ATTTCCTACAAGTTGGTATA+TGG | + | chr3_3:85415155-85415174 | None:intergenic | 30.0% |
| ! | TGAAGTTATTTCCTACAAGT+TGG | + | chr3_3:85415162-85415181 | None:intergenic | 30.0% |
| ! | ATAACTTCACATTAGCTTGA+AGG | - | chr3_3:85415173-85415192 | Msa0480220:intron | 30.0% |
| AAGTTGTCTTATAATAGGCT+TGG | - | chr3_3:85415351-85415370 | Msa0480220:intron | 30.0% | |
| AGTTGTCTTATAATAGGCTT+GGG | - | chr3_3:85415352-85415371 | Msa0480220:intron | 30.0% | |
| TATGGGAACCATTTAATAAC+TGG | + | chr3_3:85415536-85415555 | None:intergenic | 30.0% | |
| CAAATAATACATGCACCAAA+TGG | - | chr3_3:85415760-85415779 | Msa0480220:intron | 30.0% | |
| ! | GCATTCCTTTTTGCTAATTA+TGG | + | chr3_3:85415998-85416017 | None:intergenic | 30.0% |
| AATTAGCAAAAAGGAATGCA+TGG | - | chr3_3:85415999-85416018 | Msa0480220:intron | 30.0% | |
| TTGACATGTCCTAATACATT+TGG | - | chr3_3:85416037-85416056 | Msa0480220:intron | 30.0% | |
| ! | GTGTTATTGCCAAATGTATT+AGG | + | chr3_3:85416049-85416068 | None:intergenic | 30.0% |
| !! | AAATTTAAAAGTGTCCGACA+AGG | - | chr3_3:85416129-85416148 | Msa0480220:intron | 30.0% |
| TGAAATCCAAATTCTTGCTT+TGG | - | chr3_3:85416193-85416212 | Msa0480220:intron | 30.0% | |
| CTTCTGCATATTTCTTTATG+TGG | - | chr3_3:85416457-85416476 | Msa0480220:intron | 30.0% | |
| AAAAATGGCAAACGCAAATA+AGG | + | chr3_3:85416497-85416516 | None:intergenic | 30.0% | |
| !!! | TATTTGCGTTTGCCATTTTT+TGG | - | chr3_3:85416497-85416516 | Msa0480220:intron | 30.0% |
| !!! | ATTTGCGTTTGCCATTTTTT+GGG | - | chr3_3:85416498-85416517 | Msa0480220:intron | 30.0% |
| GAGGGTTGAAAATCAAAAAA+GGG | + | chr3_3:85416707-85416726 | None:intergenic | 30.0% | |
| !!! | TTTTTTGATTTTCAACCCTC+CGG | - | chr3_3:85416707-85416726 | Msa0480220:CDS | 30.0% |
| ! | TAAGGGTATATATCTTTCAG+TGG | + | chr3_3:85417076-85417095 | None:intergenic | 30.0% |
| TATATACCCTTACAATATGG+TGG | - | chr3_3:85417084-85417103 | Msa0480220:intron | 30.0% | |
| TATTGTATACGTTGAGATGT+TGG | - | chr3_3:85417156-85417175 | Msa0480220:intron | 30.0% | |
| ATTGTATACGTTGAGATGTT+GGG | - | chr3_3:85417157-85417176 | Msa0480220:intron | 30.0% | |
| ! | ATAGGAGCTAAAACTGTTTT+TGG | - | chr3_3:85417189-85417208 | Msa0480220:intron | 30.0% |
| TGATATGAACCTGTTTATGT+TGG | + | chr3_3:85417414-85417433 | None:intergenic | 30.0% | |
| ! | GGCAAAGATTTTCTGTTAAT+TGG | + | chr3_3:85417449-85417468 | None:intergenic | 30.0% |
| TAAGAATGCCAGATGTTAAA+TGG | + | chr3_3:85417560-85417579 | None:intergenic | 30.0% | |
| !! | ATTTTAACAGATTAGGAGAC+AGG | + | chr3_3:85417621-85417640 | None:intergenic | 30.0% |
| TTATCACTGCAACTTCTAAT+TGG | + | chr3_3:85417645-85417664 | None:intergenic | 30.0% | |
| AGATAAAGAACAACATGAGA+TGG | - | chr3_3:85417856-85417875 | Msa0480220:intron | 30.0% | |
| ! | TTTACATTTTTCTGTGCGAT+TGG | - | chr3_3:85417937-85417956 | Msa0480220:intron | 30.0% |
| ! | TTACATTTTTCTGTGCGATT+GGG | - | chr3_3:85417938-85417957 | Msa0480220:intron | 30.0% |
| ATTACTCGCACAAAAATGTT+TGG | - | chr3_3:85417976-85417995 | Msa0480220:intron | 30.0% | |
| !! | AATTTTACTTGGTTAGGTTG+AGG | - | chr3_3:85418050-85418069 | Msa0480220:intron | 30.0% |
| ! | ACATTATAATTTGGAATGGC+AGG | + | chr3_3:85418273-85418292 | None:intergenic | 30.0% |
| CCTGACATTATAATTTGGAA+TGG | + | chr3_3:85418250-85418269 | None:intergenic | 30.0% | |
| CCATTCCAAATTATAATGTC+AGG | - | chr3_3:85418274-85418293 | Msa0480220:intron | 30.0% | |
| ! | ATATACTCCCTTCTGTATTT+TGG | + | chr3_3:85418618-85418637 | None:intergenic | 30.0% |
| ATAGAAGTAATTGACATCAC+CGG | - | chr3_3:85418692-85418711 | Msa0480220:intron | 30.0% | |
| !! | ATATTACTTGACATTTTGGC+GGG | - | chr3_3:85418789-85418808 | Msa0480220:five_prime_UTR | 30.0% |
| ! | GAAAAGCAAATCAAGTTGTT+TGG | + | chr3_3:85418891-85418910 | None:intergenic | 30.0% |
| TTCAATGATAGGCCCAAAAA+AGG | - | chr3_3:85411100-85411119 | Msa0480220:three_prime_UTR | 35.0% | |
| !!! | TGGGTTTTAGGTAACTTTCA+AGG | + | chr3_3:85411141-85411160 | None:intergenic | 35.0% |
| GTAACGTTACTTAGGAAGAA+GGG | + | chr3_3:85411339-85411358 | None:intergenic | 35.0% | |
| AGTAACGTTACTTAGGAAGA+AGG | + | chr3_3:85411340-85411359 | None:intergenic | 35.0% | |
| GTACAAGAGTAACGTTACTT+AGG | + | chr3_3:85411347-85411366 | None:intergenic | 35.0% | |
| AGAAGCAACTTTACTCGTTA+CGG | + | chr3_3:85411408-85411427 | None:intergenic | 35.0% | |
| AACCCTTCAAATGGGAAAAT+CGG | + | chr3_3:85411491-85411510 | None:intergenic | 35.0% | |
| GCAAATGTAACCCTTCAAAT+GGG | + | chr3_3:85411499-85411518 | None:intergenic | 35.0% | |
| AGCAAATGTAACCCTTCAAA+TGG | + | chr3_3:85411500-85411519 | None:intergenic | 35.0% | |
| CAATGCATCTCAACACAAAA+AGG | + | chr3_3:85411917-85411936 | None:intergenic | 35.0% | |
| ! | CTTTTTGTGTTGAGATGCAT+TGG | - | chr3_3:85411915-85411934 | Msa0480220:CDS | 35.0% |
| AATCAAGTTACAATTCGGGT+CGG | + | chr3_3:85411943-85411962 | None:intergenic | 35.0% | |
| ACTCTCTTATTGCTCATTGA+TGG | - | chr3_3:85412120-85412139 | Msa0480220:intron | 35.0% | |
| CTCTCTTATTGCTCATTGAT+GGG | - | chr3_3:85412121-85412140 | Msa0480220:intron | 35.0% | |
| CTGTACAGTGTTAATCCATA+CGG | - | chr3_3:85412178-85412197 | Msa0480220:CDS | 35.0% | |
| ! | ATCACTGGTTGGAAATTTCA+CGG | - | chr3_3:85412258-85412277 | Msa0480220:intron | 35.0% |
| ATAATCCACAATCGACACAA+CGG | + | chr3_3:85412418-85412437 | None:intergenic | 35.0% | |
| CGCTCCAAAACCAAAATATT+GGG | + | chr3_3:85412536-85412555 | None:intergenic | 35.0% | |
| !!! | GTTTTGGAGCGCAAATATTA+AGG | - | chr3_3:85412545-85412564 | Msa0480220:intron | 35.0% |
| AATTCCAAACCAGTACGATA+AGG | - | chr3_3:85412607-85412626 | Msa0480220:CDS | 35.0% | |
| AAGTTAGAGACTGAACTATG+TGG | + | chr3_3:85413132-85413151 | None:intergenic | 35.0% | |
| CAAACCATTGTCGTTACTAT+TGG | - | chr3_3:85413261-85413280 | Msa0480220:intron | 35.0% | |
| CATCAATCTTGCTCAAAAAG+GGG | + | chr3_3:85413754-85413773 | None:intergenic | 35.0% | |
| GCATCAATCTTGCTCAAAAA+GGG | + | chr3_3:85413755-85413774 | None:intergenic | 35.0% | |
| TGCATCAATCTTGCTCAAAA+AGG | + | chr3_3:85413756-85413775 | None:intergenic | 35.0% | |
| ATTGCTCTGTGTATATGTCT+TGG | - | chr3_3:85413972-85413991 | Msa0480220:intron | 35.0% | |
| TTGCTCTGTGTATATGTCTT+GGG | - | chr3_3:85413973-85413992 | Msa0480220:intron | 35.0% | |
| !!! | GGGCTCAGTTTTTTGTATTT+TGG | - | chr3_3:85413994-85414013 | Msa0480220:intron | 35.0% |
| CTGCATTCATGATTTGATCT+AGG | - | chr3_3:85414024-85414043 | Msa0480220:intron | 35.0% | |
| CTTGTAAGTTTAGTAGGATC+GGG | + | chr3_3:85414294-85414313 | None:intergenic | 35.0% | |
| GATCCTACTAAACTTACAAG+AGG | - | chr3_3:85414294-85414313 | Msa0480220:intron | 35.0% | |
| GATCCTCTTGTAAGTTTAGT+AGG | + | chr3_3:85414300-85414319 | None:intergenic | 35.0% | |
| AAAGACACGCTTTCTGTATA+TGG | - | chr3_3:85414442-85414461 | Msa0480220:CDS | 35.0% | |
| TATAATGTGTCTCATTGCTG+TGG | - | chr3_3:85414592-85414611 | Msa0480220:intron | 35.0% | |
| !! | GAAAGCTCTGAATAAAACAG+AGG | + | chr3_3:85414661-85414680 | None:intergenic | 35.0% |
| ! | TCAAACAATAGAAGGAGTGT+TGG | + | chr3_3:85414776-85414795 | None:intergenic | 35.0% |
| TTGATATTCATGTATGGAGG+AGG | - | chr3_3:85414792-85414811 | Msa0480220:intron | 35.0% | |
| TGATATTCATGTATGGAGGA+GGG | - | chr3_3:85414793-85414812 | Msa0480220:intron | 35.0% | |
| TCTCGAGGATAGATTCATTA+AGG | + | chr3_3:85414928-85414947 | None:intergenic | 35.0% | |
| GATACCATATACCAACTTGT+AGG | - | chr3_3:85415148-85415167 | Msa0480220:intron | 35.0% | |
| ! | TTCAAAGTTGGTTGTACTCA+TGG | + | chr3_3:85415285-85415304 | None:intergenic | 35.0% |
| GTTGTCTTATAATAGGCTTG+GGG | - | chr3_3:85415353-85415372 | Msa0480220:intron | 35.0% | |
| TGCATGCTACTATAAGATAC+AGG | + | chr3_3:85415380-85415399 | None:intergenic | 35.0% | |
| !!! | TTGCACTCAATTTTTGGAAC+AGG | - | chr3_3:85415438-85415457 | Msa0480220:intron | 35.0% |
| !!! | TGCACTCAATTTTTGGAACA+GGG | - | chr3_3:85415439-85415458 | Msa0480220:intron | 35.0% |
| TTAGATACAACTGACCCAAA+TGG | + | chr3_3:85415477-85415496 | None:intergenic | 35.0% | |
| TATGCTAGTGTAAACCCATT+TGG | + | chr3_3:85415778-85415797 | None:intergenic | 35.0% | |
| GACTTGTGCAAGTACAAATT+TGG | - | chr3_3:85415836-85415855 | Msa0480220:intron | 35.0% | |
| TACTAGGAAGGAACATTTCA+AGG | + | chr3_3:85415874-85415893 | None:intergenic | 35.0% | |
| !! | TGGCAATAACACTGATTTAC+AGG | - | chr3_3:85416057-85416076 | Msa0480220:intron | 35.0% |
| !! | CAATAACACTGATTTACAGG+TGG | - | chr3_3:85416060-85416079 | Msa0480220:intron | 35.0% |
| TGTTTCGATCAATAACCTGT+CGG | - | chr3_3:85416164-85416183 | Msa0480220:intron | 35.0% | |
| GTTGATCCAAAGCAAGAATT+TGG | + | chr3_3:85416202-85416221 | None:intergenic | 35.0% | |
| ! | AATTCTTGCTTTGGATCAAC+AGG | - | chr3_3:85416202-85416221 | Msa0480220:intron | 35.0% |
| TGGCTGAAGTTTCAATAACT+TGG | - | chr3_3:85416269-85416288 | Msa0480220:intron | 35.0% | |
| GGCTGAAGTTTCAATAACTT+GGG | - | chr3_3:85416270-85416289 | Msa0480220:intron | 35.0% | |
| TGAAGTTTCAATAACTTGGG+TGG | - | chr3_3:85416273-85416292 | Msa0480220:intron | 35.0% | |
| TGGGTTTGATTCATTCTTTC+TGG | - | chr3_3:85416318-85416337 | Msa0480220:intron | 35.0% | |
| TACAAGTAAACTGAGCGTAA+AGG | + | chr3_3:85416411-85416430 | None:intergenic | 35.0% | |
| !!! | TTTGCGTTTGCCATTTTTTG+GGG | - | chr3_3:85416499-85416518 | Msa0480220:intron | 35.0% |
| ! | TGACAGAAAGTACACAGAAA+AGG | + | chr3_3:85416623-85416642 | None:intergenic | 35.0% |
| TTGAGGGTCTATTTCATGTA+GGG | + | chr3_3:85416655-85416674 | None:intergenic | 35.0% | |
| GGAGGGTTGAAAATCAAAAA+AGG | + | chr3_3:85416708-85416727 | None:intergenic | 35.0% | |
| GACACTAGTAATCCAAAGTT+CGG | - | chr3_3:85416745-85416764 | Msa0480220:exon | 35.0% | |
| ACACTAGTAATCCAAAGTTC+GGG | - | chr3_3:85416746-85416765 | Msa0480220:exon | 35.0% | |
| GTCTAGAGAATGATTGTTCT+AGG | - | chr3_3:85416784-85416803 | Msa0480220:five_prime_UTR | 35.0% | |
| TTTACAAGACTGAAACCAAG+TGG | + | chr3_3:85416878-85416897 | None:intergenic | 35.0% | |
| ! | TCAGTCTTGTAAAAACTGCT+AGG | - | chr3_3:85416885-85416904 | Msa0480220:intron | 35.0% |
| TGTCTTCTGCGAATAAGAAA+TGG | - | chr3_3:85416983-85417002 | Msa0480220:intron | 35.0% | |
| TTGTATACGTTGAGATGTTG+GGG | - | chr3_3:85417158-85417177 | Msa0480220:intron | 35.0% | |
| ! | GATGTTGGGGCAAATTTTAT+AGG | - | chr3_3:85417171-85417190 | Msa0480220:intron | 35.0% |
| !! | TTTGTACATGCACTGCTTTT+AGG | - | chr3_3:85417276-85417295 | Msa0480220:intron | 35.0% |
| !! | TTGTACATGCACTGCTTTTA+GGG | - | chr3_3:85417277-85417296 | Msa0480220:intron | 35.0% |
| !!! | GCTTTTAGGGTTGAGTTATT+AGG | - | chr3_3:85417290-85417309 | Msa0480220:intron | 35.0% |
| CAGGAATTACATCAAGACAA+TGG | + | chr3_3:85417343-85417362 | None:intergenic | 35.0% | |
| ! | AGATTTTCTGTTAATTGGCC+TGG | + | chr3_3:85417444-85417463 | None:intergenic | 35.0% |
| AAACTATAACATAGCCCTCT+TGG | - | chr3_3:85417721-85417740 | Msa0480220:intron | 35.0% | |
| ATCGGAATTTGCACTTATAG+TGG | - | chr3_3:85417822-85417841 | Msa0480220:intron | 35.0% | |
| ACGAATATTGCGTAAGTCTT+AGG | + | chr3_3:85417885-85417904 | None:intergenic | 35.0% | |
| ! | TACATTTTTCTGTGCGATTG+GGG | - | chr3_3:85417939-85417958 | Msa0480220:intron | 35.0% |
| AGCAGGAGAATAAGACAAAA+GGG | + | chr3_3:85418005-85418024 | None:intergenic | 35.0% | |
| AGAAATATCAATAGCAGAGC+AGG | + | chr3_3:85418022-85418041 | None:intergenic | 35.0% | |
| ! | AAGATAGCTGAAGCATTTGT+AGG | - | chr3_3:85418129-85418148 | Msa0480220:intron | 35.0% |
| ! | AGATAGCTGAAGCATTTGTA+GGG | - | chr3_3:85418130-85418149 | Msa0480220:intron | 35.0% |
| TTCTTGGGTTACAAGTCAAT+TGG | - | chr3_3:85418717-85418736 | Msa0480220:intron | 35.0% | |
| !! | TTTTGGGTCTTGTGGATTAA+AGG | - | chr3_3:85418746-85418765 | Msa0480220:intron | 35.0% |
| !! | TATTACTTGACATTTTGGCG+GGG | - | chr3_3:85418790-85418809 | Msa0480220:five_prime_UTR | 35.0% |
| !! | AGGAAGAAGAAGTGGGTTTT+AGG | + | chr3_3:85411153-85411172 | None:intergenic | 40.0% |
| CAAGAAGAGGAAGAAGAAGT+GGG | + | chr3_3:85411160-85411179 | None:intergenic | 40.0% | |
| ACAAGAAGAGGAAGAAGAAG+TGG | + | chr3_3:85411161-85411180 | None:intergenic | 40.0% | |
| !! | TGAAAGGAAGAAGTGTTGTG+TGG | + | chr3_3:85411211-85411230 | None:intergenic | 40.0% |
| CATTCATTCGTTGGATTTGG+AGG | + | chr3_3:85411274-85411293 | None:intergenic | 40.0% | |
| !!! | TCACCGATTTTCCCATTTGA+AGG | - | chr3_3:85411485-85411504 | Msa0480220:CDS | 40.0% |
| !!! | CACCGATTTTCCCATTTGAA+GGG | - | chr3_3:85411486-85411505 | Msa0480220:CDS | 40.0% |
| GGGTTACATTTGCTTGATTG+TGG | - | chr3_3:85411506-85411525 | Msa0480220:CDS | 40.0% | |
| ATGGGATTAGGTGGTTGAAT+TGG | - | chr3_3:85411660-85411679 | Msa0480220:CDS | 40.0% | |
| GTTAATGTGCCAGCCTTAAT+AGG | - | chr3_3:85411824-85411843 | Msa0480220:CDS | 40.0% | |
| ! | TTAAGGATAACGGTGGGAAT+CGG | - | chr3_3:85411985-85412004 | Msa0480220:intron | 40.0% |
| AATGTTGAACCGGTACAGTA+AGG | - | chr3_3:85412030-85412049 | Msa0480220:intron | 40.0% | |
| ATGTTGAACCGGTACAGTAA+GGG | - | chr3_3:85412031-85412050 | Msa0480220:intron | 40.0% | |
| CTATAACTCCCTTACTGTAC+CGG | + | chr3_3:85412042-85412061 | None:intergenic | 40.0% | |
| GGTACAGTAAGGGAGTTATA+GGG | - | chr3_3:85412041-85412060 | Msa0480220:intron | 40.0% | |
| ! | TTATTGCTCATTGATGGGCA+GGG | - | chr3_3:85412126-85412145 | Msa0480220:intron | 40.0% |
| ! | TCACTGGTTGGAAATTTCAC+GGG | - | chr3_3:85412259-85412278 | Msa0480220:intron | 40.0% |
| AATGTAACCTACGTCAACGA+GGG | + | chr3_3:85412298-85412317 | None:intergenic | 40.0% | |
| !! | CGCATGATAGCGTTTTTATG+CGG | - | chr3_3:85412464-85412483 | Msa0480220:intron | 40.0% |
| CGCGCATTGAATCACATTAA+TGG | - | chr3_3:85412488-85412507 | Msa0480220:intron | 40.0% | |
| ! | ATCACATTAATGGACCGACT+CGG | - | chr3_3:85412498-85412517 | Msa0480220:intron | 40.0% |
| CAAAACCAAAATATTGGGCC+GGG | + | chr3_3:85412531-85412550 | None:intergenic | 40.0% | |
| CCAAAACCAAAATATTGGGC+CGG | + | chr3_3:85412532-85412551 | None:intergenic | 40.0% | |
| GCGCTCCAAAACCAAAATAT+TGG | + | chr3_3:85412537-85412556 | None:intergenic | 40.0% | |
| !! | CGTACTGGTTTGGAATTACA+AGG | + | chr3_3:85412604-85412623 | None:intergenic | 40.0% |
| !! | GTATCCTTATCGTACTGGTT+TGG | + | chr3_3:85412614-85412633 | None:intergenic | 40.0% |
| ACCAGTACGATAAGGATACT+AGG | - | chr3_3:85412615-85412634 | Msa0480220:CDS | 40.0% | |
| CCAGTACGATAAGGATACTA+GGG | - | chr3_3:85412616-85412635 | Msa0480220:CDS | 40.0% | |
| ! | GGTTTCTCAGAGTATCATTG+CGG | - | chr3_3:85412637-85412656 | Msa0480220:CDS | 40.0% |
| ! | CGGCTCTCTTATCTATTTTC+CGG | - | chr3_3:85412657-85412676 | Msa0480220:CDS | 40.0% |
| GAGAGATTCTTACTTCTCTC+CGG | + | chr3_3:85412679-85412698 | None:intergenic | 40.0% | |
| TTGTGATTGTGCTTGATGCT+TGG | - | chr3_3:85412901-85412920 | Msa0480220:intron | 40.0% | |
| TGTGATTGTGCTTGATGCTT+GGG | - | chr3_3:85412902-85412921 | Msa0480220:intron | 40.0% | |
| GTCTAGATACCTTCTGATGT+TGG | - | chr3_3:85412971-85412990 | Msa0480220:CDS | 40.0% | |
| CTTCTGATGTTGGTATCATG+CGG | - | chr3_3:85412981-85413000 | Msa0480220:CDS | 40.0% | |
| TTCTGATGTTGGTATCATGC+GGG | - | chr3_3:85412982-85413001 | Msa0480220:CDS | 40.0% | |
| TTATGAACAATTGCTCCAGC+AGG | - | chr3_3:85413151-85413170 | Msa0480220:intron | 40.0% | |
| TATGAACAATTGCTCCAGCA+GGG | - | chr3_3:85413152-85413171 | Msa0480220:intron | 40.0% | |
| ACTCCCAATAGTAACGACAA+TGG | + | chr3_3:85413268-85413287 | None:intergenic | 40.0% | |
| ATCTCCCAATCTTCTTGTGA+GGG | + | chr3_3:85413364-85413383 | None:intergenic | 40.0% | |
| TATCTCCCAATCTTCTTGTG+AGG | + | chr3_3:85413365-85413384 | None:intergenic | 40.0% | |
| CACAAGAAGATTGGGAGATA+CGG | - | chr3_3:85413365-85413384 | Msa0480220:intron | 40.0% | |
| TGAGCAAGATTGATGCAAGA+TGG | - | chr3_3:85413759-85413778 | Msa0480220:intron | 40.0% | |
| ACGCACAATCTTGCAATTTC+AGG | + | chr3_3:85413805-85413824 | None:intergenic | 40.0% | |
| !! | TTTTTGGGCTCGGATTTACT+CGG | - | chr3_3:85413836-85413855 | Msa0480220:CDS | 40.0% |
| TGCTCTGTGTATATGTCTTG+GGG | - | chr3_3:85413974-85413993 | Msa0480220:intron | 40.0% | |
| TTGGTTGGATCTTACAATCG+TGG | - | chr3_3:85414233-85414252 | Msa0480220:intron | 40.0% | |
| TAAGTTTAGTAGGATCGGGA+GGG | + | chr3_3:85414290-85414309 | None:intergenic | 40.0% | |
| ATCATGCAAGATCGCAACTA+CGG | + | chr3_3:85414329-85414348 | None:intergenic | 40.0% | |
| !! | AGATTTTGACCAAGATCGGA+AGG | + | chr3_3:85414368-85414387 | None:intergenic | 40.0% |
| AATCTTGATCCTGACAACCT+TGG | - | chr3_3:85414383-85414402 | Msa0480220:intron | 40.0% | |
| TAATGTAATTAGCCCCTGCA+TGG | + | chr3_3:85414479-85414498 | None:intergenic | 40.0% | |
| ATAGGTCTGATCCTGTTACT+GGG | + | chr3_3:85414618-85414637 | None:intergenic | 40.0% | |
| TCTATCCTCGAGATATCTCA+AGG | - | chr3_3:85414935-85414954 | Msa0480220:intron | 40.0% | |
| TAGAACCTTGAGATATCTCG+AGG | + | chr3_3:85414943-85414962 | None:intergenic | 40.0% | |
| AAGAATGGAAAGAACCCACT+TGG | - | chr3_3:85415026-85415045 | Msa0480220:intron | 40.0% | |
| AGAATGGAAAGAACCCACTT+GGG | - | chr3_3:85415027-85415046 | Msa0480220:intron | 40.0% | |
| !!! | GCACTCAATTTTTGGAACAG+GGG | - | chr3_3:85415440-85415459 | Msa0480220:intron | 40.0% |
| TATCTAATCTCTTCACGCGA+TGG | - | chr3_3:85415490-85415509 | Msa0480220:intron | 40.0% | |
| ATCTAATCTCTTCACGCGAT+GGG | - | chr3_3:85415491-85415510 | Msa0480220:intron | 40.0% | |
| !! | CTCAAAGCTTTGAGGATGAA+AGG | - | chr3_3:85415603-85415622 | Msa0480220:intron | 40.0% |
| TACTTGAAACTTCTGTCGCA+TGG | - | chr3_3:85415636-85415655 | Msa0480220:intron | 40.0% | |
| CATCACAAGATATGCCTTGT+CGG | + | chr3_3:85416146-85416165 | None:intergenic | 40.0% | |
| GTTTCGATCAATAACCTGTC+GGG | - | chr3_3:85416165-85416184 | Msa0480220:intron | 40.0% | |
| CTTTGGATCAACAGGATAGA+TGG | - | chr3_3:85416210-85416229 | Msa0480220:intron | 40.0% | |
| CTACAACCAGATCATGAAAG+CGG | + | chr3_3:85416236-85416255 | None:intergenic | 40.0% | |
| CTTTCATGATCTGGTTGTAG+TGG | - | chr3_3:85416236-85416255 | Msa0480220:intron | 40.0% | |
| !! | TCATTCTTTCTGGCTTGTGT+AGG | - | chr3_3:85416328-85416347 | Msa0480220:intron | 40.0% |
| ACTTGTAATCTTCCACCTTC+AGG | - | chr3_3:85416424-85416443 | Msa0480220:intron | 40.0% | |
| AGAAATATGCAGAAGCAGAG+AGG | + | chr3_3:85416452-85416471 | None:intergenic | 40.0% | |
| !!! | TTGCGTTTGCCATTTTTTGG+GGG | - | chr3_3:85416500-85416519 | Msa0480220:intron | 40.0% |
| TGGTCAATGTAGCAGATTCT+TGG | - | chr3_3:85416524-85416543 | Msa0480220:intron | 40.0% | |
| GTTGAGGGTCTATTTCATGT+AGG | + | chr3_3:85416656-85416675 | None:intergenic | 40.0% | |
| AGGCACTATCAAATGGTTGA+GGG | + | chr3_3:85416671-85416690 | None:intergenic | 40.0% | |
| ! | AAGGCACTATCAAATGGTTG+AGG | + | chr3_3:85416672-85416691 | None:intergenic | 40.0% |
| !! | AGACTGAAGGCACTATCAAA+TGG | + | chr3_3:85416678-85416697 | None:intergenic | 40.0% |
| TCTAGGCAAAACTTCAACTC+AGG | - | chr3_3:85416801-85416820 | Msa0480220:five_prime_UTR | 40.0% | |
| TGTAAAAACTGCTAGGTGCT+TGG | - | chr3_3:85416892-85416911 | Msa0480220:intron | 40.0% | |
| GATCTTTGTCTTCTGATGCA+TGG | - | chr3_3:85417005-85417024 | Msa0480220:intron | 40.0% | |
| TTCAGTGGTGGTAAAATTGC+AGG | + | chr3_3:85417061-85417080 | None:intergenic | 40.0% | |
| GGGTATATATCTTTCAGTGG+TGG | + | chr3_3:85417073-85417092 | None:intergenic | 40.0% | |
| GCTCATCCACCATATTGTAA+GGG | + | chr3_3:85417093-85417112 | None:intergenic | 40.0% | |
| AGCTCATCCACCATATTGTA+AGG | + | chr3_3:85417094-85417113 | None:intergenic | 40.0% | |
| TGTCTTGATGTAATTCCTGC+AGG | - | chr3_3:85417344-85417363 | Msa0480220:intron | 40.0% | |
| GGTTCATATCAAACAAGTCC+AGG | - | chr3_3:85417423-85417442 | Msa0480220:intron | 40.0% | |
| TGCTCTCTCCATTTAACATC+TGG | - | chr3_3:85417549-85417568 | Msa0480220:intron | 40.0% | |
| ! | AGTTTGCTCAGATCGATGAA+TGG | - | chr3_3:85417790-85417809 | Msa0480220:intron | 40.0% |
| GTTTGCTCAGATCGATGAAT+GGG | - | chr3_3:85417791-85417810 | Msa0480220:intron | 40.0% | |
| !! | TTTGCACTTATAGTGGACAG+TGG | - | chr3_3:85417829-85417848 | Msa0480220:intron | 40.0% |
| !! | TTGCACTTATAGTGGACAGT+GGG | - | chr3_3:85417830-85417849 | Msa0480220:intron | 40.0% |
| GCAGGAGAATAAGACAAAAG+GGG | + | chr3_3:85418004-85418023 | None:intergenic | 40.0% | |
| GAGCAGGAGAATAAGACAAA+AGG | + | chr3_3:85418006-85418025 | None:intergenic | 40.0% | |
| ACAGATCTTGCTGAATTCTC+CGG | + | chr3_3:85418090-85418109 | None:intergenic | 40.0% | |
| GAGAATTCAGCAAGATCTGT+CGG | - | chr3_3:85418090-85418109 | Msa0480220:intron | 40.0% | |
| ! | ATAATTTGGAATGACAGGCC+TGG | + | chr3_3:85418241-85418260 | None:intergenic | 40.0% |
| GCAGGCCTGACATTATAATT+TGG | + | chr3_3:85418255-85418274 | None:intergenic | 40.0% | |
| GCAGGCCTGACATTATAATT+TGG | + | chr3_3:85418255-85418274 | None:intergenic | 40.0% | |
| CCTGCCATTCCAAATTACAA+CGG | - | chr3_3:85418297-85418316 | Msa0480220:intron | 40.0% | |
| ACCTCCGTTGTAATTTGGAA+TGG | + | chr3_3:85418304-85418323 | None:intergenic | 40.0% | |
| GAGTAACCTCCGTTGTAATT+TGG | + | chr3_3:85418309-85418328 | None:intergenic | 40.0% | |
| !! | TCACAGCGCCATTTTCAAAA+TGG | - | chr3_3:85418384-85418403 | Msa0480220:intron | 40.0% |
| !!! | CTTGCCTGCCATTTTGAAAA+TGG | + | chr3_3:85418395-85418414 | None:intergenic | 40.0% |
| ! | CATTTTCAAAATGGCAGGCA+AGG | - | chr3_3:85418393-85418412 | Msa0480220:intron | 40.0% |
| !! | TTGCTTTGAAGTTGCACCAT+TGG | + | chr3_3:85418493-85418512 | None:intergenic | 40.0% |
| AATGGTGCAACTTCAAAGCA+AGG | - | chr3_3:85418492-85418511 | Msa0480220:intron | 40.0% | |
| TTTGGCTATGCCATTGGATT+TGG | + | chr3_3:85418600-85418619 | None:intergenic | 40.0% | |
| !!! | CTGTATTTTGGCTATGCCAT+TGG | + | chr3_3:85418606-85418625 | None:intergenic | 40.0% |
| TGGCATAGCCAAAATACAGA+AGG | - | chr3_3:85418607-85418626 | Msa0480220:intron | 40.0% | |
| GGCATAGCCAAAATACAGAA+GGG | - | chr3_3:85418608-85418627 | Msa0480220:intron | 40.0% | |
| ATTGACATCACCGGATTTCT+TGG | - | chr3_3:85418701-85418720 | Msa0480220:intron | 40.0% | |
| TTGACATCACCGGATTTCTT+GGG | - | chr3_3:85418702-85418721 | Msa0480220:intron | 40.0% | |
| GACTTGTAACCCAAGAAATC+CGG | + | chr3_3:85418714-85418733 | None:intergenic | 40.0% | |
| !!! | GGCATAATTTTTGGGTCTTG+TGG | - | chr3_3:85418738-85418757 | Msa0480220:intron | 40.0% |
| TCATTCGTTGGATTTGGAGG+CGG | + | chr3_3:85411271-85411290 | None:intergenic | 45.0% | |
| TATGAGAGAGGAAGGAACAC+TGG | - | chr3_3:85411861-85411880 | Msa0480220:CDS | 45.0% | |
| CGGTACAGTAAGGGAGTTAT+AGG | - | chr3_3:85412040-85412059 | Msa0480220:intron | 45.0% | |
| ! | GGTTTCTCAGTGTATCGATG+CGG | - | chr3_3:85412062-85412081 | Msa0480220:intron | 45.0% |
| ! | GTTTCTCAGTGTATCGATGC+GGG | - | chr3_3:85412063-85412082 | Msa0480220:intron | 45.0% |
| ! | CTTATTGCTCATTGATGGGC+AGG | - | chr3_3:85412125-85412144 | Msa0480220:intron | 45.0% |
| CAATGTAACCTACGTCAACG+AGG | + | chr3_3:85412299-85412318 | None:intergenic | 45.0% | |
| GAATGCACACGTATTCTACG+TGG | + | chr3_3:85412328-85412347 | None:intergenic | 45.0% | |
| GACACAACGGTAGAGAATCT+TGG | + | chr3_3:85412405-85412424 | None:intergenic | 45.0% | |
| ! | AGTAACCCGGCCCAATATTT+TGG | - | chr3_3:85412523-85412542 | Msa0480220:intron | 45.0% |
| !!! | CCGGCCCAATATTTTGGTTT+TGG | - | chr3_3:85412529-85412548 | Msa0480220:intron | 45.0% |
| CCCTAGTATCCTTATCGTAC+TGG | + | chr3_3:85412619-85412638 | None:intergenic | 45.0% | |
| CAATTTGACCTACATCCACG+CGG | + | chr3_3:85412709-85412728 | None:intergenic | 45.0% | |
| CGCATGATACCAACATCAGA+AGG | + | chr3_3:85412983-85413002 | None:intergenic | 45.0% | |
| TCTGATGTTGGTATCATGCG+GGG | - | chr3_3:85412983-85413002 | Msa0480220:CDS | 45.0% | |
| !! | ATGTCCTTTGAAATCCCTGC+TGG | + | chr3_3:85413169-85413188 | None:intergenic | 45.0% |
| CAGGGATTTCAAAGGACATG+AGG | - | chr3_3:85413170-85413189 | Msa0480220:intron | 45.0% | |
| TGACACCCTCACAAGAAGAT+TGG | - | chr3_3:85413356-85413375 | Msa0480220:intron | 45.0% | |
| GACACCCTCACAAGAAGATT+GGG | - | chr3_3:85413357-85413376 | Msa0480220:intron | 45.0% | |
| TTTACCTCTCAGACTCTCCA+CGG | + | chr3_3:85413428-85413447 | None:intergenic | 45.0% | |
| ATCTTGCGTGCAAGTCAGAT+CGG | + | chr3_3:85413731-85413750 | None:intergenic | 45.0% | |
| ! | TGCGTGATCCTGAGTGTTTT+TGG | - | chr3_3:85413820-85413839 | Msa0480220:CDS | 45.0% |
| ! | GCGTGATCCTGAGTGTTTTT+GGG | - | chr3_3:85413821-85413840 | Msa0480220:CDS | 45.0% |
| !!! | ATCCTGAGTGTTTTTGGGCT+CGG | - | chr3_3:85413826-85413845 | Msa0480220:CDS | 45.0% |
| AGGCAGAGATGGTTGTTAGA+GGG | + | chr3_3:85413930-85413949 | None:intergenic | 45.0% | |
| AAGGCAGAGATGGTTGTTAG+AGG | + | chr3_3:85413931-85413950 | None:intergenic | 45.0% | |
| AAGTTTAGTAGGATCGGGAG+GGG | + | chr3_3:85414289-85414308 | None:intergenic | 45.0% | |
| GTAAGTTTAGTAGGATCGGG+AGG | + | chr3_3:85414291-85414310 | None:intergenic | 45.0% | |
| TTTGACCAAGATCGGAAGGT+GGG | + | chr3_3:85414364-85414383 | None:intergenic | 45.0% | |
| ! | TTTTGACCAAGATCGGAAGG+TGG | + | chr3_3:85414365-85414384 | None:intergenic | 45.0% |
| CTGTTTGATCCAAGGTTGTC+AGG | + | chr3_3:85414395-85414414 | None:intergenic | 45.0% | |
| TGGTGAAAGAAGATCCATGC+AGG | - | chr3_3:85414462-85414481 | Msa0480220:CDS | 45.0% | |
| GGTGAAAGAAGATCCATGCA+GGG | - | chr3_3:85414463-85414482 | Msa0480220:CDS | 45.0% | |
| GTGAAAGAAGATCCATGCAG+GGG | - | chr3_3:85414464-85414483 | Msa0480220:CDS | 45.0% | |
| CATAGGTCTGATCCTGTTAC+TGG | + | chr3_3:85414619-85414638 | None:intergenic | 45.0% | |
| GTAACAGGATCAGACCTATG+TGG | - | chr3_3:85414619-85414638 | Msa0480220:intron | 45.0% | |
| ATAGAACCTGAGACCTTGAG+AGG | + | chr3_3:85415092-85415111 | None:intergenic | 45.0% | |
| GGGCAACTGTTGAACCATTT+GGG | - | chr3_3:85415460-85415479 | Msa0480220:intron | 45.0% | |
| TCTAATCTCTTCACGCGATG+GGG | - | chr3_3:85415492-85415511 | Msa0480220:intron | 45.0% | |
| GTTCCCATATTGGATCTGCT+GGG | - | chr3_3:85415547-85415566 | Msa0480220:intron | 45.0% | |
| TCTCCCAGCAGATCCAATAT+GGG | + | chr3_3:85415553-85415572 | None:intergenic | 45.0% | |
| TTCTCCCAGCAGATCCAATA+TGG | + | chr3_3:85415554-85415573 | None:intergenic | 45.0% | |
| AACTTCTGTCGCATGGAAGT+TGG | - | chr3_3:85415643-85415662 | Msa0480220:intron | 45.0% | |
| AGAATGGGAACTCTTGCACT+GGG | + | chr3_3:85416108-85416127 | None:intergenic | 45.0% | |
| TAGAATGGGAACTCTTGCAC+TGG | + | chr3_3:85416109-85416128 | None:intergenic | 45.0% | |
| GTTGTAGTGGTACGTTCTTG+TGG | - | chr3_3:85416249-85416268 | Msa0480220:intron | 45.0% | |
| TGCTGGGCTAACAATTGCTT+GGG | - | chr3_3:85416299-85416318 | Msa0480220:intron | 45.0% | |
| !! | TTTCTGGCTTGTGTAGGTGA+AGG | - | chr3_3:85416334-85416353 | Msa0480220:intron | 45.0% |
| !!! | TGCGTTTGCCATTTTTTGGG+GGG | - | chr3_3:85416501-85416520 | Msa0480220:intron | 45.0% |
| ATTGACCACCCCCCAAAAAA+TGG | + | chr3_3:85416512-85416531 | None:intergenic | 45.0% | |
| GGGTCTATTTCATGTAGGGA+GGG | + | chr3_3:85416651-85416670 | None:intergenic | 45.0% | |
| AGGGTCTATTTCATGTAGGG+AGG | + | chr3_3:85416652-85416671 | None:intergenic | 45.0% | |
| ! | TGATAGTGCCTTCAGTCTCT+TGG | - | chr3_3:85416680-85416699 | Msa0480220:CDS | 45.0% |
| AAAAGGGACCAAGAGACTGA+AGG | + | chr3_3:85416691-85416710 | None:intergenic | 45.0% | |
| ! | TTTTCAACCCTCCGGTTCTT+AGG | - | chr3_3:85416715-85416734 | Msa0480220:CDS | 45.0% |
| TTTCAACCCTCCGGTTCTTA+GGG | - | chr3_3:85416716-85416735 | Msa0480220:CDS | 45.0% | |
| ! | TGTCCCTTTTCCCTAAGAAC+CGG | + | chr3_3:85416729-85416748 | None:intergenic | 45.0% |
| CTAGTAATCCAAAGTTCGGG+TGG | - | chr3_3:85416749-85416768 | Msa0480220:exon | 45.0% | |
| TAATCCAAAGTTCGGGTGGA+AGG | - | chr3_3:85416753-85416772 | Msa0480220:exon | 45.0% | |
| !! | AATATGGTGGATGAGCTGAG+AGG | - | chr3_3:85417097-85417116 | Msa0480220:intron | 45.0% |
| TCATCGATCTGAGCAAACTG+CGG | + | chr3_3:85417789-85417808 | None:intergenic | 45.0% | |
| AGTGCAAATTCCGATCTCTG+AGG | + | chr3_3:85417817-85417836 | None:intergenic | 45.0% | |
| ! | TGAGGATCCTTTTGAGCAAC+CGG | - | chr3_3:85418068-85418087 | Msa0480220:intron | 45.0% |
| GAATTCTCCGGTTGCTCAAA+AGG | + | chr3_3:85418078-85418097 | None:intergenic | 45.0% | |
| ATAAGACTCCACACATGTGC+TGG | + | chr3_3:85418216-85418235 | None:intergenic | 45.0% | |
| !! | ATGTGTGGAGTCTTATTGCC+AGG | - | chr3_3:85418220-85418239 | Msa0480220:intron | 45.0% |
| ! | CCGTTGTAATTTGGAATGGC+AGG | + | chr3_3:85418300-85418319 | None:intergenic | 45.0% |
| GCCATTCCAAATTACAACGG+AGG | - | chr3_3:85418300-85418319 | Msa0480220:intron | 45.0% | |
| GAAAATGGCGCTGTGACTTT+GGG | + | chr3_3:85418380-85418399 | None:intergenic | 45.0% | |
| TGAAAATGGCGCTGTGACTT+TGG | + | chr3_3:85418381-85418400 | None:intergenic | 45.0% | |
| !! | AGCGCCATTTTCAAAATGGC+AGG | - | chr3_3:85418388-85418407 | Msa0480220:intron | 45.0% |
| TTGCTTTGACGTTGAACCGT+TGG | + | chr3_3:85418427-85418446 | None:intergenic | 45.0% | |
| AACGGTTCAACGTCAAAGCA+AGG | - | chr3_3:85418426-85418445 | Msa0480220:intron | 45.0% | |
| AAGCAAGGAGCAAACTCCAA+CGG | - | chr3_3:85418441-85418460 | Msa0480220:intron | 45.0% | |
| ! | TGGATTTGAAGTTGCACCGT+TGG | + | chr3_3:85418460-85418479 | None:intergenic | 45.0% |
| AATCCAGAAGCAAGCTCCAA+TGG | - | chr3_3:85418474-85418493 | Msa0480220:intron | 45.0% | |
| TACTGTTGAAGTTGCACCGT+TGG | + | chr3_3:85418526-85418545 | None:intergenic | 45.0% | |
| ACCAAAGGCTCCAAATCCAA+TGG | - | chr3_3:85418587-85418606 | Msa0480220:intron | 45.0% | |
| ! | GGGTCTTGTGGATTAAAGGA+TGG | - | chr3_3:85418750-85418769 | Msa0480220:intron | 45.0% |
| !!! | TTATTTTTTTAGAATTATTT+AGG | - | chr3_3:85411583-85411602 | Msa0480220:CDS | 5.0% |
| !!! | TTTTTTGTTTTTTTTTTTTA+TGG | - | chr3_3:85414149-85414168 | Msa0480220:intron | 5.0% |
| !!! | TTATTTGTATTTTTAAATTT+AGG | + | chr3_3:85415747-85415766 | None:intergenic | 5.0% |
| GGATTTGGAGGCGGGAAAAA+GGG | + | chr3_3:85411262-85411281 | None:intergenic | 50.0% | |
| TGGATTTGGAGGCGGGAAAA+AGG | + | chr3_3:85411263-85411282 | None:intergenic | 50.0% | |
| CATTCGTTGGATTTGGAGGC+GGG | + | chr3_3:85411270-85411289 | None:intergenic | 50.0% | |
| ! | AGCCTGCAGTGGATTTCTCA+CGG | + | chr3_3:85412160-85412179 | None:intergenic | 50.0% |
| TAACACTGTACAGCCTGCAG+TGG | + | chr3_3:85412171-85412190 | None:intergenic | 50.0% | |
| AATTGAGTGGGGGAGATCAC+TGG | - | chr3_3:85412243-85412262 | Msa0480220:CDS | 50.0% | |
| TTTCCTTCCCTCGTTGACGT+AGG | - | chr3_3:85412288-85412307 | Msa0480220:intron | 50.0% | |
| TAACCTACGTCAACGAGGGA+AGG | + | chr3_3:85412294-85412313 | None:intergenic | 50.0% | |
| !! | CTCTACCGTTGTGTCGATTG+TGG | - | chr3_3:85412410-85412429 | Msa0480220:intron | 50.0% |
| TGCTCCAGCAGGGATTTCAA+AGG | - | chr3_3:85413162-85413181 | Msa0480220:intron | 50.0% | |
| ATCCGAGCCCAAAAACACTC+AGG | + | chr3_3:85413831-85413850 | None:intergenic | 50.0% | |
| GAGAGAGTGAAAGGCAGAGA+TGG | + | chr3_3:85413941-85413960 | None:intergenic | 50.0% | |
| AGGATCAGACCTATGTGGCA+GGG | - | chr3_3:85414624-85414643 | Msa0480220:intron | 50.0% | |
| TGGAAAGAACCCACTTGGGT+TGG | - | chr3_3:85415031-85415050 | Msa0480220:intron | 50.0% | |
| ACTACCAGACCAACCCAAGT+GGG | + | chr3_3:85415043-85415062 | None:intergenic | 50.0% | |
| !! | TTGGGTTGGTCTGGTAGTGT+TGG | - | chr3_3:85415045-85415064 | Msa0480220:intron | 50.0% |
| !! | TTGGTCTGGTAGTGTTGGCT+TGG | - | chr3_3:85415050-85415069 | Msa0480220:intron | 50.0% |
| !! | TGGTCTGGTAGTGTTGGCTT+GGG | - | chr3_3:85415051-85415070 | Msa0480220:intron | 50.0% |
| CTTGAGAGGAGCAAACTCGA+AGG | + | chr3_3:85415078-85415097 | None:intergenic | 50.0% | |
| ! | CTTCGAGTTTGCTCCTCTCA+AGG | - | chr3_3:85415076-85415095 | Msa0480220:intron | 50.0% |
| TTTGCTCCTCTCAAGGTCTC+AGG | - | chr3_3:85415083-85415102 | Msa0480220:intron | 50.0% | |
| GGGGCAACTGTTGAACCATT+TGG | - | chr3_3:85415459-85415478 | Msa0480220:intron | 50.0% | |
| GGTTCCCATATTGGATCTGC+TGG | - | chr3_3:85415546-85415565 | Msa0480220:intron | 50.0% | |
| ! | CAGTTTTGCAGGACTGAGTC+AGG | + | chr3_3:85415714-85415733 | None:intergenic | 50.0% |
| CTGACTCAGTCCTGCAAAAC+TGG | - | chr3_3:85415712-85415731 | Msa0480220:intron | 50.0% | |
| ! | GAGAATCAGGCCAGTTTTGC+AGG | + | chr3_3:85415725-85415744 | None:intergenic | 50.0% |
| GAATGGGAACTCTTGCACTG+GGG | + | chr3_3:85416107-85416126 | None:intergenic | 50.0% | |
| TGGATTTCATCAAGCCCGAC+AGG | + | chr3_3:85416182-85416201 | None:intergenic | 50.0% | |
| ! | AGATGGCCGCTTTCATGATC+TGG | - | chr3_3:85416227-85416246 | Msa0480220:intron | 50.0% |
| AATAACTTGGGTGGCTGTGC+TGG | - | chr3_3:85416282-85416301 | Msa0480220:intron | 50.0% | |
| ATAACTTGGGTGGCTGTGCT+GGG | - | chr3_3:85416283-85416302 | Msa0480220:intron | 50.0% | |
| GTGCTGGGCTAACAATTGCT+TGG | - | chr3_3:85416298-85416317 | Msa0480220:intron | 50.0% | |
| GCTTGTGTAGGTGAAGGAGT+GGG | - | chr3_3:85416340-85416359 | Msa0480220:intron | 50.0% | |
| !! | AGAAGCAGAGAGGTACCTGA+AGG | + | chr3_3:85416442-85416461 | None:intergenic | 50.0% |
| !!! | GTTTGCCATTTTTTGGGGGG+TGG | - | chr3_3:85416504-85416523 | Msa0480220:intron | 50.0% |
| ! | CCTTTTCCCTAAGAACCGGA+GGG | + | chr3_3:85416725-85416744 | None:intergenic | 50.0% |
| CCTCCGGTTCTTAGGGAAAA+GGG | - | chr3_3:85416723-85416742 | Msa0480220:CDS | 50.0% | |
| CTTACCTTCCACCCGAACTT+TGG | + | chr3_3:85416760-85416779 | None:intergenic | 50.0% | |
| AACCTGTGAGCTCAACCACT+TGG | - | chr3_3:85416860-85416879 | Msa0480220:five_prime_UTR | 50.0% | |
| AACCAAGTGGTTGAGCTCAC+AGG | + | chr3_3:85416865-85416884 | None:intergenic | 50.0% | |
| CCTGTTTATGTTGGCAGCAC+AGG | + | chr3_3:85417405-85417424 | None:intergenic | 50.0% | |
| CCTGTGCTGCCAACATAAAC+AGG | - | chr3_3:85417402-85417421 | Msa0480220:intron | 50.0% | |
| CATCGATCTGAGCAAACTGC+GGG | + | chr3_3:85417788-85417807 | None:intergenic | 50.0% | |
| GATGAATGGGCCTCAGAGAT+CGG | - | chr3_3:85417804-85417823 | Msa0480220:intron | 50.0% | |
| AGTTAGCACCAGCACATGTG+TGG | - | chr3_3:85418205-85418224 | Msa0480220:intron | 50.0% | |
| AAGCAAGGAGCAAGCTCCAA+CGG | - | chr3_3:85418507-85418526 | Msa0480220:intron | 50.0% | |
| GTACCTGCTAAAGCACGTCA+AGG | - | chr3_3:85418543-85418562 | Msa0480220:intron | 50.0% | |
| ! | GCCATTGGATTTGGAGCCTT+TGG | + | chr3_3:85418591-85418610 | None:intergenic | 50.0% |
| TCCCGTGAGAAATCCACTGC+AGG | - | chr3_3:85412155-85412174 | Msa0480220:intron | 55.0% | |
| ! | GCCTGCAGTGGATTTCTCAC+GGG | + | chr3_3:85412159-85412178 | None:intergenic | 55.0% |
| !! | GACCGACTCGGATAGTAACC+CGG | - | chr3_3:85412510-85412529 | Msa0480220:intron | 55.0% |
| GAATCCGTGGAGAGTCTGAG+AGG | - | chr3_3:85413421-85413440 | Msa0480220:intron | 55.0% | |
| CAAGTCAGATCGGAAGGGGT+GGG | + | chr3_3:85413721-85413740 | None:intergenic | 55.0% | |
| CGTGCAAGTCAGATCGGAAG+GGG | + | chr3_3:85413725-85413744 | None:intergenic | 55.0% | |
| GCGTGCAAGTCAGATCGGAA+GGG | + | chr3_3:85413726-85413745 | None:intergenic | 55.0% | |
| TGCGTGCAAGTCAGATCGGA+AGG | + | chr3_3:85413727-85413746 | None:intergenic | 55.0% | |
| CCAAGTCGCGAGAGAGTGAA+AGG | + | chr3_3:85413950-85413969 | None:intergenic | 55.0% | |
| CCTTTCACTCTCTCGCGACT+TGG | - | chr3_3:85413947-85413966 | Msa0480220:CDS | 55.0% | |
| TGCTACCCACCTTCCGATCT+TGG | - | chr3_3:85414356-85414375 | Msa0480220:intron | 55.0% | |
| CATTGCTGTGGCCCAGTAAC+AGG | - | chr3_3:85414604-85414623 | Msa0480220:intron | 55.0% | |
| CAGGATCAGACCTATGTGGC+AGG | - | chr3_3:85414623-85414642 | Msa0480220:intron | 55.0% | |
| GCTAGTCATCCCTGCCACAT+AGG | + | chr3_3:85414636-85414655 | None:intergenic | 55.0% | |
| !! | AGAACCCACTTGGGTTGGTC+TGG | - | chr3_3:85415036-85415055 | Msa0480220:intron | 55.0% |
| CACTACCAGACCAACCCAAG+TGG | + | chr3_3:85415044-85415063 | None:intergenic | 55.0% | |
| GGCTTGTGTAGGTGAAGGAG+TGG | - | chr3_3:85416339-85416358 | Msa0480220:intron | 55.0% | |
| !! | AGCAGAGAGGTACCTGAAGG+TGG | + | chr3_3:85416439-85416458 | None:intergenic | 55.0% |
| CCCTCCGGTTCTTAGGGAAA+AGG | - | chr3_3:85416722-85416741 | Msa0480220:CDS | 55.0% | |
| ! | CCCTTTTCCCTAAGAACCGG+AGG | + | chr3_3:85416726-85416745 | None:intergenic | 55.0% |
| ! | GCATCAGCTCTAACACCTGC+AGG | + | chr3_3:85417362-85417381 | None:intergenic | 55.0% |
| TCCAACTCATCCACAGCCAC+AGG | - | chr3_3:85418332-85418351 | Msa0480220:intron | 55.0% | |
| CCAACTCATCCACAGCCACA+GGG | - | chr3_3:85418333-85418352 | Msa0480220:intron | 55.0% | |
| CAACTCATCCACAGCCACAG+GGG | - | chr3_3:85418334-85418353 | Msa0480220:intron | 55.0% | |
| AGGCAAGGTGCAAGCTCCAA+CGG | - | chr3_3:85418408-85418427 | Msa0480220:intron | 55.0% | |
| ! | GCACCATTGGAGCTTGCTTC+TGG | + | chr3_3:85418480-85418499 | None:intergenic | 55.0% |
| GGACCTTGACGTGCTTTAGC+AGG | + | chr3_3:85418549-85418568 | None:intergenic | 55.0% | |
| GAGTGGGGGAGATCACTGGT+TGG | - | chr3_3:85412247-85412266 | Msa0480220:CDS | 60.0% | |
| GGCCGGGTTACTATCCGAGT+CGG | + | chr3_3:85412515-85412534 | None:intergenic | 60.0% | |
| AATCTCTCTCCCTGTCCGCG+TGG | - | chr3_3:85412691-85412710 | Msa0480220:intron | 60.0% | |
| GACCTACATCCACGCGGACA+GGG | + | chr3_3:85412703-85412722 | None:intergenic | 60.0% | |
| TGACCTACATCCACGCGGAC+AGG | + | chr3_3:85412704-85412723 | None:intergenic | 60.0% | |
| ATCGGAAGGGGTGGGTGAGT+AGG | + | chr3_3:85413713-85413732 | None:intergenic | 60.0% | |
| GCAAGTCAGATCGGAAGGGG+TGG | + | chr3_3:85413722-85413741 | None:intergenic | 60.0% | |
| CTTCACGCGATGGGGTGACT+TGG | - | chr3_3:85415500-85415519 | Msa0480220:intron | 60.0% | |
| CCCTGTGGCTGTGGATGAGT+TGG | + | chr3_3:85418336-85418355 | None:intergenic | 60.0% | |
| ATCCACAGCCACAGGGGCAA+AGG | - | chr3_3:85418340-85418359 | Msa0480220:intron | 60.0% | |
| TCCACAGCCACAGGGGCAAA+GGG | - | chr3_3:85418341-85418360 | Msa0480220:intron | 60.0% | |
| GGCGCTGTGACTTTGGGTGT+GGG | + | chr3_3:85418374-85418393 | None:intergenic | 60.0% | |
| TGGCGCTGTGACTTTGGGTG+TGG | + | chr3_3:85418375-85418394 | None:intergenic | 60.0% | |
| ACGTCAAGGTCCACAGCAGC+AGG | - | chr3_3:85418557-85418576 | Msa0480220:intron | 60.0% | |
| AAGGTCCACAGCAGCAGGCA+TGG | - | chr3_3:85418562-85418581 | Msa0480220:intron | 60.0% | |
| GCAGCAGGCATGGAGACCAA+AGG | - | chr3_3:85418572-85418591 | Msa0480220:intron | 60.0% | |
| CTCCCTGTCCGCGTGGATGT+AGG | - | chr3_3:85412698-85412717 | Msa0480220:intron | 65.0% | |
| !! | GCGAAGCGCTGCTGAATCCG+TGG | - | chr3_3:85413408-85413427 | Msa0480220:intron | 65.0% |
| CCACAGCCACAGGGGCAAAG+GGG | - | chr3_3:85418342-85418361 | Msa0480220:intron | 65.0% | |
| AACACGCCCCTTTGCCCCTG+TGG | + | chr3_3:85418351-85418370 | None:intergenic | 65.0% | |
| GGTCTCCATGCCTGCTGCTG+TGG | + | chr3_3:85418570-85418589 | None:intergenic | 65.0% | |
| CCCCTTTGCCCCTGTGGCTG+TGG | + | chr3_3:85418345-85418364 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 85411096 | 85418969 | 85411096 | ID=Msa0480220;Name=Msa0480220 |
| chr3_3 | mRNA | 85411096 | 85418969 | 85411096 | ID=Msa0480220-mRNA-1;Parent=Msa0480220;Name=Msa0480220-mRNA-1;_AED=0.11;_eAED=0.11;_QI=334|1|1|1|0.87|0.88|9|355|479 |
| chr3_3 | exon | 85411096 | 85411999 | 85411096 | ID=Msa0480220-mRNA-1:exon:24582;Parent=Msa0480220-mRNA-1 |
| chr3_3 | exon | 85412163 | 85412273 | 85412163 | ID=Msa0480220-mRNA-1:exon:24581;Parent=Msa0480220-mRNA-1 |
| chr3_3 | exon | 85412569 | 85412699 | 85412569 | ID=Msa0480220-mRNA-1:exon:24580;Parent=Msa0480220-mRNA-1 |
| chr3_3 | exon | 85412947 | 85413016 | 85412947 | ID=Msa0480220-mRNA-1:exon:24579;Parent=Msa0480220-mRNA-1 |
| chr3_3 | exon | 85413620 | 85413715 | 85413620 | ID=Msa0480220-mRNA-1:exon:24578;Parent=Msa0480220-mRNA-1 |
| chr3_3 | exon | 85413808 | 85413986 | 85413808 | ID=Msa0480220-mRNA-1:exon:24577;Parent=Msa0480220-mRNA-1 |
| chr3_3 | exon | 85414441 | 85414605 | 85414441 | ID=Msa0480220-mRNA-1:exon:24576;Parent=Msa0480220-mRNA-1 |
| chr3_3 | exon | 85416623 | 85416892 | 85416623 | ID=Msa0480220-mRNA-1:exon:24575;Parent=Msa0480220-mRNA-1 |
| chr3_3 | exon | 85418767 | 85418969 | 85418767 | ID=Msa0480220-mRNA-1:exon:24574;Parent=Msa0480220-mRNA-1 |
| chr3_3 | five_prime_UTR | 85418767 | 85418969 | 85418767 | ID=Msa0480220-mRNA-1:five_prime_utr;Parent=Msa0480220-mRNA-1 |
| chr3_3 | five_prime_UTR | 85416762 | 85416892 | 85416762 | ID=Msa0480220-mRNA-1:five_prime_utr;Parent=Msa0480220-mRNA-1 |
| chr3_3 | CDS | 85416623 | 85416761 | 85416623 | ID=Msa0480220-mRNA-1:cds;Parent=Msa0480220-mRNA-1 |
| chr3_3 | CDS | 85414441 | 85414605 | 85414441 | ID=Msa0480220-mRNA-1:cds;Parent=Msa0480220-mRNA-1 |
| chr3_3 | CDS | 85413808 | 85413986 | 85413808 | ID=Msa0480220-mRNA-1:cds;Parent=Msa0480220-mRNA-1 |
| chr3_3 | CDS | 85413620 | 85413715 | 85413620 | ID=Msa0480220-mRNA-1:cds;Parent=Msa0480220-mRNA-1 |
| chr3_3 | CDS | 85412947 | 85413016 | 85412947 | ID=Msa0480220-mRNA-1:cds;Parent=Msa0480220-mRNA-1 |
| chr3_3 | CDS | 85412569 | 85412699 | 85412569 | ID=Msa0480220-mRNA-1:cds;Parent=Msa0480220-mRNA-1 |
| chr3_3 | CDS | 85412163 | 85412273 | 85412163 | ID=Msa0480220-mRNA-1:cds;Parent=Msa0480220-mRNA-1 |
| chr3_3 | CDS | 85411451 | 85411999 | 85411451 | ID=Msa0480220-mRNA-1:cds;Parent=Msa0480220-mRNA-1 |
| chr3_3 | three_prime_UTR | 85411096 | 85411450 | 85411096 | ID=Msa0480220-mRNA-1:three_prime_utr;Parent=Msa0480220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
