Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1091520 | XP_013447464.1 | 94.561 | 239 | 13 | 0 | 1 | 239 | 1 | 239 | 1.20e-165 | 467 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1091520 | sp|Q8LFP9|ABA4_ARATH | 62.304 | 191 | 71 | 1 | 44 | 234 | 31 | 220 | 4.23e-85 | 255 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1091520 | G7ZY14 | 94.561 | 239 | 13 | 0 | 1 | 239 | 1 | 239 | 5.75e-166 | 467 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa1091520 | 0.809208 | 2.119333e-50 | -8.615850e-47 |
| Msa0016670 | Msa1091520 | 0.833294 | 5.792472e-56 | -8.615850e-47 |
| Msa0032920 | Msa1091520 | -0.811172 | 7.996687e-51 | -8.615850e-47 |
| Msa0040240 | Msa1091520 | 0.810810 | 9.578404e-51 | -8.615850e-47 |
| Msa0043670 | Msa1091520 | -0.826916 | 2.086179e-54 | -8.615850e-47 |
| Msa0057710 | Msa1091520 | 0.801535 | 8.599397e-49 | -8.615850e-47 |
| Msa0069330 | Msa1091520 | 0.800800 | 1.216136e-48 | -8.615850e-47 |
| Msa0073670 | Msa1091520 | 0.805492 | 1.300255e-49 | -8.615850e-47 |
| Msa0074320 | Msa1091520 | 0.801985 | 6.953355e-49 | -8.615850e-47 |
| Msa0076000 | Msa1091520 | 0.801938 | 7.110772e-49 | -8.615850e-47 |
| Msa0077200 | Msa1091520 | 0.824589 | 7.436574e-54 | -8.615850e-47 |
| Msa0092670 | Msa1091520 | -0.818936 | 1.511204e-52 | -8.615850e-47 |
| Msa0092690 | Msa1091520 | -0.811834 | 5.742418e-51 | -8.615850e-47 |
| Msa0092740 | Msa1091520 | -0.812612 | 3.884187e-51 | -8.615850e-47 |
| Msa0094120 | Msa1091520 | 0.801606 | 8.319253e-49 | -8.615850e-47 |
| Msa0097810 | Msa1091520 | 0.815075 | 1.113360e-51 | -8.615850e-47 |
| Msa0110360 | Msa1091520 | 0.800362 | 1.493636e-48 | -8.615850e-47 |
| Msa0110970 | Msa1091520 | 0.834200 | 3.439187e-56 | -8.615850e-47 |
| Msa0115160 | Msa1091520 | 0.816796 | 4.598132e-52 | -8.615850e-47 |
| Msa0118570 | Msa1091520 | 0.807885 | 4.061273e-50 | -8.615850e-47 |
| Msa0620990 | Msa1091520 | 0.818039 | 2.413726e-52 | -8.615850e-47 |
| Msa0643300 | Msa1091520 | 0.802312 | 5.956951e-49 | -8.615850e-47 |
| Msa0650090 | Msa1091520 | 0.828864 | 7.092240e-55 | -8.615850e-47 |
| Msa0683570 | Msa1091520 | 0.857586 | 1.475886e-62 | -8.615850e-47 |
| Msa0688410 | Msa1091520 | 0.802988 | 4.319768e-49 | -8.615850e-47 |
| Msa0692080 | Msa1091520 | 0.837379 | 5.380690e-57 | -8.615850e-47 |
| Msa0701280 | Msa1091520 | 0.806031 | 1.002100e-49 | -8.615850e-47 |
| Msa0702340 | Msa1091520 | 0.822069 | 2.885808e-53 | -8.615850e-47 |
| Msa0702590 | Msa1091520 | 0.818665 | 1.741471e-52 | -8.615850e-47 |
| Msa0702660 | Msa1091520 | 0.818616 | 1.785841e-52 | -8.615850e-47 |
| Msa0703230 | Msa1091520 | 0.838789 | 2.334044e-57 | -8.615850e-47 |
| Msa0708520 | Msa1091520 | 0.815136 | 1.078877e-51 | -8.615850e-47 |
| Msa0709780 | Msa1091520 | 0.811473 | 6.880820e-51 | -8.615850e-47 |
| Msa0738040 | Msa1091520 | 0.811112 | 8.238220e-51 | -8.615850e-47 |
| Msa0749760 | Msa1091520 | 0.802458 | 5.556377e-49 | -8.615850e-47 |
| Msa0788770 | Msa1091520 | 0.823745 | 1.173781e-53 | -8.615850e-47 |
| Msa0122630 | Msa1091520 | 0.804050 | 2.601768e-49 | -8.615850e-47 |
| Msa0124990 | Msa1091520 | 0.826360 | 2.831988e-54 | -8.615850e-47 |
| Msa0134180 | Msa1091520 | 0.818670 | 1.736766e-52 | -8.615850e-47 |
| Msa0137610 | Msa1091520 | -0.817134 | 3.860824e-52 | -8.615850e-47 |
| Msa0180930 | Msa1091520 | 0.802262 | 6.098268e-49 | -8.615850e-47 |
| Msa0182620 | Msa1091520 | -0.808999 | 2.350147e-50 | -8.615850e-47 |
| Msa0186890 | Msa1091520 | 0.837979 | 3.776447e-57 | -8.615850e-47 |
| Msa0197420 | Msa1091520 | 0.809065 | 2.275233e-50 | -8.615850e-47 |
| Msa0225740 | Msa1091520 | 0.806377 | 8.472855e-50 | -8.615850e-47 |
| Msa0402330 | Msa1091520 | 0.801025 | 1.093846e-48 | -8.615850e-47 |
| Msa0413450 | Msa1091520 | 0.801382 | 9.244068e-49 | -8.615850e-47 |
| Msa0417880 | Msa1091520 | 0.803917 | 2.772887e-49 | -8.615850e-47 |
| Msa0422850 | Msa1091520 | 0.821538 | 3.829453e-53 | -8.615850e-47 |
| Msa0422930 | Msa1091520 | 0.819315 | 1.239059e-52 | -8.615850e-47 |
| Msa0434920 | Msa1091520 | 0.835520 | 1.600093e-56 | -8.615850e-47 |
| Msa0439190 | Msa1091520 | 0.806061 | 9.876847e-50 | -8.615850e-47 |
| Msa0447370 | Msa1091520 | 0.800123 | 1.670423e-48 | -8.615850e-47 |
| Msa0467300 | Msa1091520 | 0.800316 | 1.525937e-48 | -8.615850e-47 |
| Msa0475790 | Msa1091520 | 0.817623 | 2.996421e-52 | -8.615850e-47 |
| Msa0994630 | Msa1091520 | 0.809752 | 1.620282e-50 | -8.615850e-47 |
| Msa1012310 | Msa1091520 | 0.804355 | 2.248037e-49 | -8.615850e-47 |
| Msa1012380 | Msa1091520 | 0.814314 | 1.640921e-51 | -8.615850e-47 |
| Msa1037640 | Msa1091520 | 0.804282 | 2.327831e-49 | -8.615850e-47 |
| Msa1063950 | Msa1091520 | 0.804756 | 1.854230e-49 | -8.615850e-47 |
| Msa1066490 | Msa1091520 | 0.800242 | 1.580263e-48 | -8.615850e-47 |
| Msa1074810 | Msa1091520 | 0.804511 | 2.085467e-49 | -8.615850e-47 |
| Msa1082700 | Msa1091520 | 0.805501 | 1.294843e-49 | -8.615850e-47 |
| Msa1091520 | Msa1097640 | 0.813110 | 3.021037e-51 | -8.615850e-47 |
| Msa1091520 | Msa1113340 | 0.802272 | 6.069624e-49 | -8.615850e-47 |
| Msa1091520 | Msa1124110 | 0.825553 | 4.403303e-54 | -8.615850e-47 |
| Msa1091520 | Msa1126510 | 0.818201 | 2.218250e-52 | -8.615850e-47 |
| Msa1091520 | Msa1127890 | 0.815065 | 1.119064e-51 | -8.615850e-47 |
| Msa1091520 | Msa1128710 | 0.804475 | 2.121660e-49 | -8.615850e-47 |
| Msa1091520 | Msa1139810 | 0.821864 | 3.218799e-53 | -8.615850e-47 |
| Msa1091520 | Msa1143650 | 0.807289 | 5.435365e-50 | -8.615850e-47 |
| Msa1091520 | Msa1165870 | 0.814093 | 1.835746e-51 | -8.615850e-47 |
| Msa1091520 | Msa1166860 | 0.800474 | 1.417293e-48 | -8.615850e-47 |
| Msa1091520 | Msa1168950 | 0.816401 | 5.635041e-52 | -8.615850e-47 |
| Msa1091520 | Msa1169040 | 0.815968 | 7.044969e-52 | -8.615850e-47 |
| Msa1091520 | Msa1187840 | 0.800479 | 1.413920e-48 | -8.615850e-47 |
| Msa1091520 | Msa1200370 | 0.808506 | 2.995152e-50 | -8.615850e-47 |
| Msa1091520 | Msa1201650 | 0.800098 | 1.689870e-48 | -8.615850e-47 |
| Msa1091520 | Msa1224840 | 0.821311 | 4.320193e-53 | -8.615850e-47 |
| Msa1091520 | Msa1232710 | 0.819643 | 1.042877e-52 | -8.615850e-47 |
| Msa1091520 | Msa1252190 | 0.845558 | 3.768026e-59 | -8.615850e-47 |
| Msa1091520 | Msa1254610 | 0.819141 | 1.357101e-52 | -8.615850e-47 |
| Msa1091520 | Msa1256340 | 0.821005 | 5.080941e-53 | -8.615850e-47 |
| Msa1091520 | Msa1274060 | 0.806202 | 9.224354e-50 | -8.615850e-47 |
| Msa1091520 | Msa1281190 | 0.805848 | 1.094756e-49 | -8.615850e-47 |
| Msa1091520 | Msa1283170 | 0.801413 | 9.111923e-49 | -8.615850e-47 |
| Msa1091520 | Msa1283910 | 0.807407 | 5.131460e-50 | -8.615850e-47 |
| Msa1091520 | Msa1292830 | 0.857257 | 1.846530e-62 | -8.615850e-47 |
| Msa1091520 | Msa1313300 | 0.820606 | 6.277326e-53 | -8.615850e-47 |
| Msa1091520 | Msa1316780 | 0.812842 | 3.458601e-51 | -8.615850e-47 |
| Msa1091520 | Msa1316830 | 0.812646 | 3.818288e-51 | -8.615850e-47 |
| Msa1091520 | Msa1333560 | 0.800686 | 1.282928e-48 | -8.615850e-47 |
| Msa1091520 | Msa1367370 | 0.802128 | 6.499679e-49 | -8.615850e-47 |
| Msa1091520 | Msa1369150 | 0.821828 | 3.281213e-53 | -8.615850e-47 |
| Msa1091520 | Msa1373330 | 0.807800 | 4.234776e-50 | -8.615850e-47 |
| Msa1091520 | Msa1375410 | 0.806313 | 8.738630e-50 | -8.615850e-47 |
| Msa1091520 | Msa1427060 | 0.809095 | 2.241152e-50 | -8.615850e-47 |
| Msa1091520 | Msa1440260 | -0.827571 | 1.453508e-54 | -8.615850e-47 |
| Msa1091520 | Msa1446810 | 0.810968 | 8.854794e-51 | -8.615850e-47 |
| Msa1091520 | Msa1459380 | 0.812545 | 4.017637e-51 | -8.615850e-47 |
| Msa1091520 | Msa1466990 | 0.814237 | 1.706705e-51 | -8.615850e-47 |
| Msa0239190 | Msa1091520 | 0.802072 | 6.671487e-49 | -8.615850e-47 |
| Msa0253700 | Msa1091520 | 0.801051 | 1.080313e-48 | -8.615850e-47 |
| Msa0255090 | Msa1091520 | 0.828452 | 8.922701e-55 | -8.615850e-47 |
| Msa0259380 | Msa1091520 | 0.823733 | 1.181722e-53 | -8.615850e-47 |
| Msa0264570 | Msa1091520 | 0.814879 | 1.230325e-51 | -8.615850e-47 |
| Msa0264870 | Msa1091520 | 0.834501 | 2.889984e-56 | -8.615850e-47 |
| Msa0292400 | Msa1091520 | 0.841675 | 4.115718e-58 | -8.615850e-47 |
| Msa0294160 | Msa1091520 | 0.819178 | 1.331455e-52 | -8.615850e-47 |
| Msa0316810 | Msa1091520 | 0.812165 | 4.862560e-51 | -8.615850e-47 |
| Msa0355270 | Msa1091520 | 0.810825 | 9.507092e-51 | -8.615850e-47 |
| Msa0527860 | Msa1091520 | 0.805905 | 1.064924e-49 | -8.615850e-47 |
| Msa0541860 | Msa1091520 | 0.835908 | 1.275965e-56 | -8.615850e-47 |
| Msa0574890 | Msa1091520 | 0.832283 | 1.032509e-55 | -8.615850e-47 |
| Msa0586190 | Msa1091520 | 0.803861 | 2.848471e-49 | -8.615850e-47 |
| Msa0856050 | Msa1091520 | 0.811384 | 7.193600e-51 | -8.615850e-47 |
| Msa0861510 | Msa1091520 | 0.803998 | 2.667308e-49 | -8.615850e-47 |
| Msa0869780 | Msa1091520 | 0.812954 | 3.269589e-51 | -8.615850e-47 |
| Msa0909230 | Msa1091520 | 0.821567 | 3.770161e-53 | -8.615850e-47 |
| Msa0930780 | Msa1091520 | 0.839469 | 1.555829e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1091520 | MtrunA17_Chr7g0215461 | 94.561 | 239 | 13 | 0 | 1 | 239 | 1 | 239 | 1.11e-169 | 467 |
| Msa1091520 | MtrunA17_Chr6g0460091 | 70.698 | 215 | 57 | 2 | 31 | 239 | 10 | 224 | 7.98e-107 | 307 |
| Msa1091520 | MtrunA17_Chr6g0457611 | 63.673 | 245 | 74 | 3 | 1 | 239 | 1 | 236 | 1.22e-106 | 307 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1091520 | AT1G67080.1 | 62.304 | 191 | 71 | 1 | 44 | 234 | 31 | 220 | 4.30e-86 | 255 |
| Msa1091520 | AT1G67080.2 | 56.303 | 119 | 51 | 1 | 44 | 162 | 31 | 148 | 8.14e-42 | 140 |
Find 58 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTATTTGCTGTGCCTTTCT+TGG | 0.147302 | 7_3:+6810026 | Msa1091520:CDS |
| CTCTGCTTGGATTCACCTTT+TGG | 0.175390 | 7_3:+6810239 | Msa1091520:CDS |
| AAAATCAATCGAACTGTTTC+AGG | 0.185668 | 7_3:-6810052 | None:intergenic |
| AAACGTACCAGATCGGATTT+TGG | 0.231509 | 7_3:-6809784 | None:intergenic |
| CGAACCGATCTTGTAGCTTT+TGG | 0.236227 | 7_3:-6808824 | None:intergenic |
| AAGGGTTGTACCTTATTAAA+TGG | 0.248376 | 7_3:-6807689 | None:intergenic |
| TTCACCATTACCATTTAATA+AGG | 0.254760 | 7_3:+6807679 | Msa1091520:CDS |
| ATGAATATGAAGCTGAAATT+TGG | 0.275042 | 7_3:-6807562 | None:intergenic |
| TGACTTTGAATGTTCACATT+TGG | 0.314118 | 7_3:+6811236 | Msa1091520:three_prime_UTR |
| AGTGGAGATTGGAGTTTCAT+AGG | 0.317626 | 7_3:+6808779 | Msa1091520:CDS |
| GGTTCAGTTTAAGTGGAGAT+TGG | 0.339350 | 7_3:+6808768 | Msa1091520:CDS |
| AATATTAGTTGTAATTTCAT+TGG | 0.343241 | 7_3:+6810992 | Msa1091520:three_prime_UTR |
| ATCAAACAAAATACATGTTT+AGG | 0.346995 | 7_3:-6810949 | None:intergenic |
| CTCAATGTTGCAGGGTTCAT+AGG | 0.368762 | 7_3:+6809685 | Msa1091520:intron |
| TACATTCAAACTTATGTTGC+GGG | 0.373256 | 7_3:-6811165 | None:intergenic |
| TTTCTGATATCAAAAGAGAT+TGG | 0.374873 | 7_3:-6811083 | None:intergenic |
| TTATGTTGCGGGTGGAGAAA+TGG | 0.388679 | 7_3:-6811154 | None:intergenic |
| CCTACTTCTCGAAATGTGTT+TGG | 0.391336 | 7_3:-6808747 | None:intergenic |
| TGAATGTACATTCAGAAAAC+AGG | 0.393017 | 7_3:+6811180 | Msa1091520:three_prime_UTR |
| ATCAAATTGAAGCATTAAAC+AGG | 0.398350 | 7_3:+6811123 | Msa1091520:three_prime_UTR |
| AGAAGTAGGTTCAGTTTAAG+TGG | 0.418640 | 7_3:+6808761 | Msa1091520:CDS |
| AGTTTACCATATGTAGTTCT+CGG | 0.419762 | 7_3:+6809992 | Msa1091520:CDS |
| TCATGTTGGAAGTCGAGAAA+TGG | 0.431456 | 7_3:-6811216 | None:intergenic |
| TTCTGATATCAAAAGAGATT+GGG | 0.435030 | 7_3:-6811082 | None:intergenic |
| CCAAACACATTTCGAGAAGT+AGG | 0.439294 | 7_3:+6808747 | Msa1091520:CDS |
| AGTTGACTTTAGCCTCTGCT+TGG | 0.453787 | 7_3:+6810226 | Msa1091520:CDS |
| AGATGGTCATGGTTTATAGA+TGG | 0.462348 | 7_3:+6810924 | Msa1091520:exon |
| TGTACCTTATTAAATGGTAA+TGG | 0.465204 | 7_3:-6807683 | None:intergenic |
| ACATGAGTAAGAATCCCAAT+TGG | 0.470965 | 7_3:-6810868 | None:intergenic |
| CCTTTCTCTATCAGGAGTGA+TGG | 0.472888 | 7_3:+6808719 | Msa1091520:CDS |
| TAAAACTCTGTAGGACAGTT+GGG | 0.479095 | 7_3:+6808678 | Msa1091520:CDS |
| ACCAAAACTACAAGAAAAGA+TGG | 0.507075 | 7_3:+6810907 | Msa1091520:CDS |
| ATAAAACTCTGTAGGACAGT+TGG | 0.510520 | 7_3:+6808677 | Msa1091520:CDS |
| CTGTTTCAGGTGTCCAAGAA+AGG | 0.512995 | 7_3:-6810039 | None:intergenic |
| CCATCACTCCTGATAGAGAA+AGG | 0.526576 | 7_3:-6808719 | None:intergenic |
| TATGTTGCGGGTGGAGAAAT+GGG | 0.528998 | 7_3:-6811153 | None:intergenic |
| TGGGCAAAAGAACAAGCAAA+AGG | 0.529473 | 7_3:-6810848 | None:intergenic |
| TCTAGCCCCAAAATCCGATC+TGG | 0.530853 | 7_3:+6809777 | Msa1091520:CDS |
| AGAATGCCGAGAACTACATA+TGG | 0.531914 | 7_3:-6809998 | None:intergenic |
| CATGAGTAAGAATCCCAATT+GGG | 0.537813 | 7_3:-6810867 | None:intergenic |
| GTGAACATTCAAAGTCATGT+TGG | 0.541816 | 7_3:-6811230 | None:intergenic |
| CCCCATGAAAATACAGTGCT+AGG | 0.544192 | 7_3:-6809718 | None:intergenic |
| GTACATTCAAACTTATGTTG+CGG | 0.563429 | 7_3:-6811166 | None:intergenic |
| TCCTTGCAGCTTTCTAGCAT+AGG | 0.568671 | 7_3:+6810186 | Msa1091520:intron |
| AGAACCATAAGGGTGTAAAA+CGG | 0.569144 | 7_3:-6809757 | None:intergenic |
| TATTCATATATATGAAGAAG+TGG | 0.572941 | 7_3:+6807578 | Msa1091520:five_prime_UTR |
| TCCAGGCATATATTTCATGA+TGG | 0.581090 | 7_3:+6810790 | Msa1091520:intron |
| CAGAAAGAAACGTACCAGAT+CGG | 0.600587 | 7_3:-6809791 | None:intergenic |
| AACAACAGATTCAGCAACAA+TGG | 0.604765 | 7_3:-6807601 | None:intergenic |
| GGAGATTGGAGTTTCATAGG+AGG | 0.615543 | 7_3:+6808782 | Msa1091520:CDS |
| GAGATTGGAGTTTCATAGGA+GGG | 0.616886 | 7_3:+6808783 | Msa1091520:CDS |
| ACTACAAGAAAAGATGGTCA+TGG | 0.623185 | 7_3:+6810913 | Msa1091520:CDS |
| ATTCAAACTTATGTTGCGGG+TGG | 0.623558 | 7_3:-6811162 | None:intergenic |
| AAAACCAAAAGCTACAAGAT+CGG | 0.627640 | 7_3:+6808820 | Msa1091520:CDS |
| CAAAAGGTGAATCCAAGCAG+AGG | 0.662634 | 7_3:-6810238 | None:intergenic |
| TGAAGAATCAGATTGAAACT+CGG | 0.677130 | 7_3:+6810815 | Msa1091520:CDS |
| GGCAGGATATAAAACTCTGT+AGG | 0.684612 | 7_3:+6808669 | Msa1091520:intron |
| GAGTAAATACTTACTACCTG+AGG | 0.719897 | 7_3:+6810078 | Msa1091520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTGATTTATAATCATTT+GGG | + | chr7_3:6808647-6808666 | Msa1091520:intron | 10.0% |
| !!! | TATATTTATCTTATCTTTTT+TGG | + | chr7_3:6809057-6809076 | Msa1091520:intron | 10.0% |
| !! | ATTTGTGTAAAATCAAAAAA+AGG | - | chr7_3:6807766-6807785 | None:intergenic | 15.0% |
| !!! | TTTTTTTGATTTTACACAAA+TGG | + | chr7_3:6807765-6807784 | Msa1091520:intron | 15.0% |
| !!! | TTTTTTGATTTTACACAAAT+GGG | + | chr7_3:6807766-6807785 | Msa1091520:intron | 15.0% |
| !!! | TTGTTTAAAACAAAACAAAT+AGG | + | chr7_3:6808399-6808418 | Msa1091520:intron | 15.0% |
| !!! | CATATTGATTTATAATCATT+TGG | + | chr7_3:6808646-6808665 | Msa1091520:intron | 15.0% |
| !!! | TATTGATTTATAATCATTTG+GGG | + | chr7_3:6808648-6808667 | Msa1091520:intron | 15.0% |
| !! | AACAAACAATAAAATAAAGT+TGG | - | chr7_3:6809296-6809315 | None:intergenic | 15.0% |
| !! | TAATTTCAGAAAAATTAATC+AGG | - | chr7_3:6809941-6809960 | None:intergenic | 15.0% |
| !! | AATATTAGTTGTAATTTCAT+TGG | + | chr7_3:6810992-6811011 | Msa1091520:three_prime_UTR | 15.0% |
| !! | TATTCATATATATGAAGAAG+TGG | + | chr7_3:6807578-6807597 | Msa1091520:five_prime_UTR | 20.0% |
| !! | TACAAAACAAAACAATGAAA+GGG | - | chr7_3:6807710-6807729 | None:intergenic | 20.0% |
| !! | TTACAAAACAAAACAATGAA+AGG | - | chr7_3:6807711-6807730 | None:intergenic | 20.0% |
| !!! | TGCATTTTTTTTGTCTTTTT+TGG | + | chr7_3:6807738-6807757 | Msa1091520:intron | 20.0% |
| !!! | TTTTTGATTTTACACAAATG+GGG | + | chr7_3:6807767-6807786 | Msa1091520:intron | 20.0% |
| !! | TTTGTAATAGATTTGATGTT+AGG | + | chr7_3:6807936-6807955 | Msa1091520:intron | 20.0% |
| !!! | AATTTGCTTATAATAATGAC+CGG | - | chr7_3:6807991-6808010 | None:intergenic | 20.0% |
| !!! | TAAGCAAATTTTGACTTTTT+AGG | + | chr7_3:6808001-6808020 | Msa1091520:intron | 20.0% |
| !!! | AAGTAGAAATTTGCTTATAA+TGG | + | chr7_3:6808093-6808112 | Msa1091520:intron | 20.0% |
| !!! | AAATCTTCAATTTTAAGTGT+CGG | - | chr7_3:6808479-6808498 | None:intergenic | 20.0% |
| !! | AGTTTATTTATTCGTATGTA+TGG | + | chr7_3:6808578-6808597 | Msa1091520:intron | 20.0% |
| !!! | TTTTTCATGTAATCTAGAAT+TGG | + | chr7_3:6808900-6808919 | Msa1091520:intron | 20.0% |
| !! | AATTTACCATTCAATAGAAT+TGG | + | chr7_3:6808944-6808963 | Msa1091520:intron | 20.0% |
| !!! | ATTTATCTTATCTTTTTTGG+CGG | + | chr7_3:6809060-6809079 | Msa1091520:intron | 20.0% |
| !!! | AAACTATCTTAAAGCATTTA+AGG | - | chr7_3:6809240-6809259 | None:intergenic | 20.0% |
| !!! | CTCTATTCTTTTTAAGTTTT+TGG | + | chr7_3:6809398-6809417 | Msa1091520:intron | 20.0% |
| !! | ACATGAATAATTGTAGAAAA+GGG | - | chr7_3:6809466-6809485 | None:intergenic | 20.0% |
| !! | CAAAAGAATAACAGAAAATT+AGG | - | chr7_3:6809516-6809535 | None:intergenic | 20.0% |
| !! | TAACAATCTATTCAATTCAA+TGG | - | chr7_3:6809585-6809604 | None:intergenic | 20.0% |
| !!! | ACAATTCATATTCAGTTTTT+AGG | + | chr7_3:6809850-6809869 | Msa1091520:intron | 20.0% |
| !!! | TCCTTTTCATTTCATTTATT+TGG | + | chr7_3:6809900-6809919 | Msa1091520:intron | 20.0% |
| !! | ACCAAATAAATGAAATGAAA+AGG | - | chr7_3:6809904-6809923 | None:intergenic | 20.0% |
| !! | TTTAGATGTTCAAATATACA+TGG | + | chr7_3:6810535-6810554 | Msa1091520:intron | 20.0% |
| !! | AATATAATTGGGATGATTAA+TGG | - | chr7_3:6810564-6810583 | None:intergenic | 20.0% |
| !! | TCAAGATCATGAATATAATT+GGG | - | chr7_3:6810575-6810594 | None:intergenic | 20.0% |
| !! | ATCAAACAAAATACATGTTT+AGG | - | chr7_3:6810952-6810971 | None:intergenic | 20.0% |
| !!! | GTATTTTGTTTGATGAATTT+AGG | + | chr7_3:6810958-6810977 | Msa1091520:three_prime_UTR | 20.0% |
| !!! | AATTTCATTGGTACATTTTT+TGG | + | chr7_3:6811004-6811023 | Msa1091520:three_prime_UTR | 20.0% |
| ! | GAGAAAAAGTTAGCTAAAAT+TGG | - | chr7_3:6807533-6807552 | None:intergenic | 25.0% |
| ! | ATGAATATGAAGCTGAAATT+TGG | - | chr7_3:6807565-6807584 | None:intergenic | 25.0% |
| ! | TTCACCATTACCATTTAATA+AGG | + | chr7_3:6807679-6807698 | Msa1091520:CDS | 25.0% |
| ! | TGTACCTTATTAAATGGTAA+TGG | - | chr7_3:6807686-6807705 | None:intergenic | 25.0% |
| ! | ATTTCACATTAGTAATGCAT+TGG | - | chr7_3:6807875-6807894 | None:intergenic | 25.0% |
| ! | AATGCATTACTAATGTGAAA+TGG | + | chr7_3:6807874-6807893 | Msa1091520:intron | 25.0% |
| ! | ATGCATTACTAATGTGAAAT+GGG | + | chr7_3:6807875-6807894 | Msa1091520:intron | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | + | chr7_3:6808026-6808045 | Msa1091520:intron | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr7_3:6808026-6808045 | None:intergenic | 25.0% |
| ! | TGATATGTTATAATGCATGT+TGG | + | chr7_3:6808250-6808269 | Msa1091520:intron | 25.0% |
| !!! | TTTTGTTTTAAACAACCTAG+CGG | - | chr7_3:6808394-6808413 | None:intergenic | 25.0% |
| ! | GAGTTTGTATTTCAAAAAGT+TGG | + | chr7_3:6808421-6808440 | Msa1091520:intron | 25.0% |
| !!! | TTTTGGTTTTACAACAATTC+TGG | - | chr7_3:6808810-6808829 | None:intergenic | 25.0% |
| ! | TGAAAAAGTAGCATGAAAAA+AGG | - | chr7_3:6808887-6808906 | None:intergenic | 25.0% |
| !!! | TGAGCATAATGGATATATTT+AGG | + | chr7_3:6808980-6808999 | Msa1091520:intron | 25.0% |
| ! | CACATGAATAATTGTAGAAA+AGG | - | chr7_3:6809467-6809486 | None:intergenic | 25.0% |
| !! | CTTTTCTACAATTATTCATG+TGG | + | chr7_3:6809465-6809484 | Msa1091520:intron | 25.0% |
| ! | AATTGCTTGTTCTGTATAAA+TGG | + | chr7_3:6809643-6809662 | Msa1091520:intron | 25.0% |
| ! | AATATAGACCAAAAAGTCTA+TGG | + | chr7_3:6809964-6809983 | Msa1091520:intron | 25.0% |
| !! | AAGGAGTATGCAAATATAAA+CGG | - | chr7_3:6810171-6810190 | None:intergenic | 25.0% |
| ! | ACAAAAAATCGAGAACAATT+TGG | + | chr7_3:6810379-6810398 | Msa1091520:intron | 25.0% |
| ! | TTTGAACATCTAAAAACCAT+TGG | - | chr7_3:6810529-6810548 | None:intergenic | 25.0% |
| ! | CTCAAGATCATGAATATAAT+TGG | - | chr7_3:6810576-6810595 | None:intergenic | 25.0% |
| ! | CAATTATATTCATGATCTTG+AGG | + | chr7_3:6810574-6810593 | Msa1091520:intron | 25.0% |
| ! | TAACACAGATTAACAGATTA+TGG | - | chr7_3:6810628-6810647 | None:intergenic | 25.0% |
| !! | TATTTCTCTGACAGTATTTT+TGG | + | chr7_3:6810760-6810779 | Msa1091520:intron | 25.0% |
| ! | TTCTGATATCAAAAGAGATT+GGG | - | chr7_3:6811085-6811104 | None:intergenic | 25.0% |
| ! | TTTCTGATATCAAAAGAGAT+TGG | - | chr7_3:6811086-6811105 | None:intergenic | 25.0% |
| !! | ATCTCTTTTGATATCAGAAA+TGG | + | chr7_3:6811086-6811105 | Msa1091520:three_prime_UTR | 25.0% |
| !! | ATCAAATTGAAGCATTAAAC+AGG | + | chr7_3:6811123-6811142 | Msa1091520:three_prime_UTR | 25.0% |
| AAGGGTTGTACCTTATTAAA+TGG | - | chr7_3:6807692-6807711 | None:intergenic | 30.0% | |
| TATTAAATATGTACTCCCTC+CGG | + | chr7_3:6807969-6807988 | Msa1091520:intron | 30.0% | |
| ! | AATTTGCTTATAATGGTGAC+CGG | + | chr7_3:6808100-6808119 | Msa1091520:intron | 30.0% |
| CAGAGAAATTTGATATGTTG+TGG | + | chr7_3:6808313-6808332 | Msa1091520:intron | 30.0% | |
| TGCTAAGAAGTTGAAAATGA+GGG | - | chr7_3:6808351-6808370 | None:intergenic | 30.0% | |
| ! | ATTTTCAACTTCTTAGCACT+TGG | + | chr7_3:6808353-6808372 | Msa1091520:intron | 30.0% |
| ! | TGAATTTTCCTTTCTCTATC+AGG | + | chr7_3:6808711-6808730 | Msa1091520:CDS | 30.0% |
| AAAACCAAAAGCTACAAGAT+CGG | + | chr7_3:6808820-6808839 | Msa1091520:CDS | 30.0% | |
| !! | GTATTTGACTTCTTTTTGGA+TGG | - | chr7_3:6808850-6808869 | None:intergenic | 30.0% |
| !! | GCATGTATTTGACTTCTTTT+TGG | - | chr7_3:6808854-6808873 | None:intergenic | 30.0% |
| ! | GGTTCTTTTGCAAAAATTGT+TGG | + | chr7_3:6809001-6809020 | Msa1091520:intron | 30.0% |
| CAAAAATTGTTGGATCTGTA+AGG | + | chr7_3:6809011-6809030 | Msa1091520:intron | 30.0% | |
| TCGTAAAGTAGGTTACTATT+AGG | + | chr7_3:6809088-6809107 | Msa1091520:intron | 30.0% | |
| CGTAAAGTAGGTTACTATTA+GGG | + | chr7_3:6809089-6809108 | Msa1091520:intron | 30.0% | |
| !! | AAGTTTTTGGAGACAAGTTA+TGG | + | chr7_3:6809411-6809430 | Msa1091520:intron | 30.0% |
| ! | ACTACTTTCCATAGACTTTT+TGG | - | chr7_3:6809975-6809994 | None:intergenic | 30.0% |
| AGTTTACCATATGTAGTTCT+CGG | + | chr7_3:6809992-6810011 | Msa1091520:CDS | 30.0% | |
| AAAATCAATCGAACTGTTTC+AGG | - | chr7_3:6810055-6810074 | None:intergenic | 30.0% | |
| CAAAAAGATCAACAACCAAA+AGG | - | chr7_3:6810257-6810276 | None:intergenic | 30.0% | |
| GAAATCACAAAAGATACAAC+AGG | - | chr7_3:6810289-6810308 | None:intergenic | 30.0% | |
| TTGGATAATTAATGCCGTTA+AGG | + | chr7_3:6810398-6810417 | Msa1091520:intron | 30.0% | |
| AATGCAATTAACCCTGAATT+TGG | + | chr7_3:6810493-6810512 | Msa1091520:intron | 30.0% | |
| AAACTATACACATGATATCG+TGG | + | chr7_3:6810647-6810666 | Msa1091520:intron | 30.0% | |
| ATTAATGACATTCAAAACCG+TGG | + | chr7_3:6810681-6810700 | Msa1091520:intron | 30.0% | |
| !!! | GTATTTTTGGTTCAAAATCC+AGG | + | chr7_3:6810773-6810792 | Msa1091520:intron | 30.0% |
| TGAAGAATCAGATTGAAACT+CGG | + | chr7_3:6810815-6810834 | Msa1091520:CDS | 30.0% | |
| ACCAAAACTACAAGAAAAGA+TGG | + | chr7_3:6810907-6810926 | Msa1091520:CDS | 30.0% | |
| ! | ACCATCTTTTCTTGTAGTTT+TGG | - | chr7_3:6810911-6810930 | None:intergenic | 30.0% |
| TACATTCAAACTTATGTTGC+GGG | - | chr7_3:6811168-6811187 | None:intergenic | 30.0% | |
| GTACATTCAAACTTATGTTG+CGG | - | chr7_3:6811169-6811188 | None:intergenic | 30.0% | |
| TGAATGTACATTCAGAAAAC+AGG | + | chr7_3:6811180-6811199 | Msa1091520:three_prime_UTR | 30.0% | |
| TGACTTTGAATGTTCACATT+TGG | + | chr7_3:6811236-6811255 | Msa1091520:three_prime_UTR | 30.0% | |
| AACAACAGATTCAGCAACAA+TGG | - | chr7_3:6807604-6807623 | None:intergenic | 35.0% | |
| ATTTGATGTTAGGTGCATGT+TGG | + | chr7_3:6807946-6807965 | Msa1091520:intron | 35.0% | |
| TGCTTATAATAATGACCGGA+GGG | - | chr7_3:6807987-6808006 | None:intergenic | 35.0% | |
| TTGCTTATAATAATGACCGG+AGG | - | chr7_3:6807988-6808007 | None:intergenic | 35.0% | |
| TGTTTGTGTAAGTGCTTCAT+AGG | + | chr7_3:6808162-6808181 | Msa1091520:intron | 35.0% | |
| AGTGCTTCATAGGCAATAAA+AGG | + | chr7_3:6808172-6808191 | Msa1091520:intron | 35.0% | |
| GTGCTTCATAGGCAATAAAA+GGG | + | chr7_3:6808173-6808192 | Msa1091520:intron | 35.0% | |
| CCATATGAGTTATACTTACG+CGG | - | chr7_3:6808210-6808229 | None:intergenic | 35.0% | |
| CTGCAACATTCTATCATATG+AGG | - | chr7_3:6808296-6808315 | None:intergenic | 35.0% | |
| AATTTGATATGTTGTGGCGT+CGG | + | chr7_3:6808319-6808338 | Msa1091520:intron | 35.0% | |
| GCTAAGAAGTTGAAAATGAG+GGG | - | chr7_3:6808350-6808369 | None:intergenic | 35.0% | |
| GTGCTAAGAAGTTGAAAATG+AGG | - | chr7_3:6808352-6808371 | None:intergenic | 35.0% | |
| TTGTGTCATCAAACCAACTT+TGG | + | chr7_3:6808449-6808468 | Msa1091520:intron | 35.0% | |
| TTGAAGATTTGTCCAGTGTT+TGG | + | chr7_3:6808489-6808508 | Msa1091520:intron | 35.0% | |
| ! | GATTTATAATCATTTGGGGC+AGG | + | chr7_3:6808652-6808671 | Msa1091520:intron | 35.0% |
| ATAAAACTCTGTAGGACAGT+TGG | + | chr7_3:6808677-6808696 | Msa1091520:CDS | 35.0% | |
| TAAAACTCTGTAGGACAGTT+GGG | + | chr7_3:6808678-6808697 | Msa1091520:CDS | 35.0% | |
| AGAAGTAGGTTCAGTTTAAG+TGG | + | chr7_3:6808761-6808780 | Msa1091520:CDS | 35.0% | |
| TCACAGCCAATTCTATTGAA+TGG | - | chr7_3:6808953-6808972 | None:intergenic | 35.0% | |
| TTCAATAGAATTGGCTGTGA+AGG | + | chr7_3:6808953-6808972 | Msa1091520:intron | 35.0% | |
| GTGAAGGAATTTGAGCATAA+TGG | + | chr7_3:6808969-6808988 | Msa1091520:intron | 35.0% | |
| CTAAGCTGTTTATCCAAACA+GGG | + | chr7_3:6809359-6809378 | Msa1091520:intron | 35.0% | |
| GAAAAGGGAATACATGCAAA+AGG | - | chr7_3:6809451-6809470 | None:intergenic | 35.0% | |
| AGCCTTGAACAAACACATTT+AGG | + | chr7_3:6809553-6809572 | Msa1091520:intron | 35.0% | |
| GACCTAAATGTGTTTGTTCA+AGG | - | chr7_3:6809558-6809577 | None:intergenic | 35.0% | |
| TGCTTGTTCTGTATAAATGG+TGG | + | chr7_3:6809646-6809665 | Msa1091520:intron | 35.0% | |
| !! | TTGTTTTACCTCAATGTTGC+AGG | + | chr7_3:6809676-6809695 | Msa1091520:intron | 35.0% |
| ! | TGTTTTACCTCAATGTTGCA+GGG | + | chr7_3:6809677-6809696 | Msa1091520:intron | 35.0% |
| ! | TTCCTAGCACTGTATTTTCA+TGG | + | chr7_3:6809716-6809735 | Msa1091520:CDS | 35.0% |
| ! | TCCTAGCACTGTATTTTCAT+GGG | + | chr7_3:6809717-6809736 | Msa1091520:CDS | 35.0% |
| ! | AGAACCATAAGGGTGTAAAA+CGG | - | chr7_3:6809760-6809779 | None:intergenic | 35.0% |
| GAGTAAATACTTACTACCTG+AGG | + | chr7_3:6810078-6810097 | Msa1091520:CDS | 35.0% | |
| ! | TTGTTGATCTTTTTGCTGCA+AGG | + | chr7_3:6810262-6810281 | Msa1091520:CDS | 35.0% |
| CAGCAATAACGAGGAAAATT+GGG | - | chr7_3:6810319-6810338 | None:intergenic | 35.0% | |
| ATGAAAAACCAGCAATAACG+AGG | - | chr7_3:6810328-6810347 | None:intergenic | 35.0% | |
| ! | ATTAATGCCGTTAAGGTATC+TGG | + | chr7_3:6810405-6810424 | Msa1091520:intron | 35.0% |
| ATCTGGTTGATCGTATTAAG+TGG | + | chr7_3:6810422-6810441 | Msa1091520:intron | 35.0% | |
| GTCACAACTCATTAATCATC+CGG | + | chr7_3:6810468-6810487 | Msa1091520:intron | 35.0% | |
| TCAGGGTTAATTGCATTAAC+CGG | - | chr7_3:6810490-6810509 | None:intergenic | 35.0% | |
| GTTTATGACGTCCAAATTCA+GGG | - | chr7_3:6810507-6810526 | None:intergenic | 35.0% | |
| ATTTGGACGTCATAAACCAA+TGG | + | chr7_3:6810510-6810529 | Msa1091520:intron | 35.0% | |
| TTCGACAACAAAATTCACCA+CGG | - | chr7_3:6810701-6810720 | None:intergenic | 35.0% | |
| TCCAGGCATATATTTCATGA+TGG | + | chr7_3:6810790-6810809 | Msa1091520:intron | 35.0% | |
| TCCATCATGAAATATATGCC+TGG | - | chr7_3:6810794-6810813 | None:intergenic | 35.0% | |
| CATGAGTAAGAATCCCAATT+GGG | - | chr7_3:6810870-6810889 | None:intergenic | 35.0% | |
| ACATGAGTAAGAATCCCAAT+TGG | - | chr7_3:6810871-6810890 | None:intergenic | 35.0% | |
| !!! | TGTAGTTTTGGTCATTGCTT+TGG | - | chr7_3:6810899-6810918 | None:intergenic | 35.0% |
| ACTACAAGAAAAGATGGTCA+TGG | + | chr7_3:6810913-6810932 | Msa1091520:CDS | 35.0% | |
| AGATGGTCATGGTTTATAGA+TGG | + | chr7_3:6810924-6810943 | Msa1091520:exon | 35.0% | |
| GTGAACATTCAAAGTCATGT+TGG | - | chr7_3:6811233-6811252 | None:intergenic | 35.0% | |
| CCGCGTAAGTATAACTCATA+TGG | + | chr7_3:6808207-6808226 | Msa1091520:intron | 40.0% | |
| TCAACTTCTTAGCACTTGGT+TGG | + | chr7_3:6808357-6808376 | Msa1091520:intron | 40.0% | |
| TTCAATGTAACCGCATATGC+CGG | - | chr7_3:6808534-6808553 | None:intergenic | 40.0% | |
| GGCAGGATATAAAACTCTGT+AGG | + | chr7_3:6808669-6808688 | Msa1091520:intron | 40.0% | |
| CCTACTTCTCGAAATGTGTT+TGG | - | chr7_3:6808750-6808769 | None:intergenic | 40.0% | |
| CCAAACACATTTCGAGAAGT+AGG | + | chr7_3:6808747-6808766 | Msa1091520:CDS | 40.0% | |
| GGTTCAGTTTAAGTGGAGAT+TGG | + | chr7_3:6808768-6808787 | Msa1091520:CDS | 40.0% | |
| AGTGGAGATTGGAGTTTCAT+AGG | + | chr7_3:6808779-6808798 | Msa1091520:CDS | 40.0% | |
| GAGATTGGAGTTTCATAGGA+GGG | + | chr7_3:6808783-6808802 | Msa1091520:CDS | 40.0% | |
| GGTTACTATTAGGGCATGTT+TGG | + | chr7_3:6809098-6809117 | Msa1091520:intron | 40.0% | |
| GCTAAGCTGTTTATCCAAAC+AGG | + | chr7_3:6809358-6809377 | Msa1091520:intron | 40.0% | |
| AGAAAAGACAAGACCCTGTT+TGG | - | chr7_3:6809375-6809394 | None:intergenic | 40.0% | |
| ! | CCTAGCACTGTATTTTCATG+GGG | + | chr7_3:6809718-6809737 | Msa1091520:CDS | 40.0% |
| !!! | TTTTGGGGCTAGAACCATAA+GGG | - | chr7_3:6809770-6809789 | None:intergenic | 40.0% |
| !!! | ATTTTGGGGCTAGAACCATA+AGG | - | chr7_3:6809771-6809790 | None:intergenic | 40.0% |
| ! | AACGTACCAGATCGGATTTT+GGG | - | chr7_3:6809786-6809805 | None:intergenic | 40.0% |
| ! | AAACGTACCAGATCGGATTT+TGG | - | chr7_3:6809787-6809806 | None:intergenic | 40.0% |
| CAGAAAGAAACGTACCAGAT+CGG | - | chr7_3:6809794-6809813 | None:intergenic | 40.0% | |
| AGAATGCCGAGAACTACATA+TGG | - | chr7_3:6810001-6810020 | None:intergenic | 40.0% | |
| !! | CTTATTTGCTGTGCCTTTCT+TGG | + | chr7_3:6810026-6810045 | Msa1091520:CDS | 40.0% |
| GATGAATGAATACACACCTC+AGG | - | chr7_3:6810097-6810116 | None:intergenic | 40.0% | |
| CCAGCAATAACGAGGAAAAT+TGG | - | chr7_3:6810320-6810339 | None:intergenic | 40.0% | |
| ! | CCAATTTTCCTCGTTATTGC+TGG | + | chr7_3:6810317-6810336 | Msa1091520:intron | 40.0% |
| CGATCAACCAGATACCTTAA+CGG | - | chr7_3:6810415-6810434 | None:intergenic | 40.0% | |
| GGTTGATCGTATTAAGTGGT+TGG | + | chr7_3:6810426-6810445 | Msa1091520:intron | 40.0% | |
| GGTTTATGACGTCCAAATTC+AGG | - | chr7_3:6810508-6810527 | None:intergenic | 40.0% | |
| TGGGCAAAAGAACAAGCAAA+AGG | - | chr7_3:6810851-6810870 | None:intergenic | 40.0% | |
| ! | TGCTTGTTCTTTTGCCCAAT+TGG | + | chr7_3:6810853-6810872 | Msa1091520:CDS | 40.0% |
| ! | GCTTGTTCTTTTGCCCAATT+GGG | + | chr7_3:6810854-6810873 | Msa1091520:CDS | 40.0% |
| ATTCAAACTTATGTTGCGGG+TGG | - | chr7_3:6811165-6811184 | None:intergenic | 40.0% | |
| TCATGTTGGAAGTCGAGAAA+TGG | - | chr7_3:6811219-6811238 | None:intergenic | 40.0% | |
| TTGCTTATAATGGTGACCGG+AGG | + | chr7_3:6808103-6808122 | Msa1091520:intron | 45.0% | |
| TGCTTATAATGGTGACCGGA+GGG | + | chr7_3:6808104-6808123 | Msa1091520:intron | 45.0% | |
| AGTGTCAATTCTACTCCCTC+CGG | - | chr7_3:6808122-6808141 | None:intergenic | 45.0% | |
| CATTGACACATGCCAAACAC+TGG | - | chr7_3:6808504-6808523 | None:intergenic | 45.0% | |
| CATGTGTCAATGTCCAACAC+CGG | + | chr7_3:6808512-6808531 | Msa1091520:intron | 45.0% | |
| CCATCACTCCTGATAGAGAA+AGG | - | chr7_3:6808722-6808741 | None:intergenic | 45.0% | |
| CCTTTCTCTATCAGGAGTGA+TGG | + | chr7_3:6808719-6808738 | Msa1091520:CDS | 45.0% | |
| GGAGATTGGAGTTTCATAGG+AGG | + | chr7_3:6808782-6808801 | Msa1091520:CDS | 45.0% | |
| ! | CGAACCGATCTTGTAGCTTT+TGG | - | chr7_3:6808827-6808846 | None:intergenic | 45.0% |
| TGGCGGCATTATCGTAAAGT+AGG | + | chr7_3:6809077-6809096 | Msa1091520:intron | 45.0% | |
| ACTCGAATAGCTGAGATCAG+TGG | - | chr7_3:6809491-6809510 | None:intergenic | 45.0% | |
| CTATGAACCCTGCAACATTG+AGG | - | chr7_3:6809687-6809706 | None:intergenic | 45.0% | |
| CTCAATGTTGCAGGGTTCAT+AGG | + | chr7_3:6809685-6809704 | Msa1091520:intron | 45.0% | |
| CCCCATGAAAATACAGTGCT+AGG | - | chr7_3:6809721-6809740 | None:intergenic | 45.0% | |
| ! | GCTTCCGTTTTACACCCTTA+TGG | + | chr7_3:6809753-6809772 | Msa1091520:CDS | 45.0% |
| ! | ACGTACCAGATCGGATTTTG+GGG | - | chr7_3:6809785-6809804 | None:intergenic | 45.0% |
| ! | CTGTTTCAGGTGTCCAAGAA+AGG | - | chr7_3:6810042-6810061 | None:intergenic | 45.0% |
| ! | TCCTTGCAGCTTTCTAGCAT+AGG | + | chr7_3:6810186-6810205 | Msa1091520:intron | 45.0% |
| TCCTATGCTAGAAAGCTGCA+AGG | - | chr7_3:6810190-6810209 | None:intergenic | 45.0% | |
| ! | AGTTGACTTTAGCCTCTGCT+TGG | + | chr7_3:6810226-6810245 | Msa1091520:CDS | 45.0% |
| CAAAAGGTGAATCCAAGCAG+AGG | - | chr7_3:6810241-6810260 | None:intergenic | 45.0% | |
| ! | CTCTGCTTGGATTCACCTTT+TGG | + | chr7_3:6810239-6810258 | Msa1091520:CDS | 45.0% |
| TATGTTGCGGGTGGAGAAAT+GGG | - | chr7_3:6811156-6811175 | None:intergenic | 45.0% | |
| TTATGTTGCGGGTGGAGAAA+TGG | - | chr7_3:6811157-6811176 | None:intergenic | 45.0% | |
| ! | TTGGTGTGAGTTTTGCCGCT+AGG | + | chr7_3:6808376-6808395 | Msa1091520:intron | 50.0% |
| !! | AAGTGTCGGTGCTCCAAAGT+TGG | - | chr7_3:6808465-6808484 | None:intergenic | 50.0% |
| ATGTCCAACACCGGCATATG+CGG | + | chr7_3:6808521-6808540 | Msa1091520:intron | 50.0% | |
| ! | GACTGTTTGAGACTTGAGCG+AGG | + | chr7_3:6809163-6809182 | Msa1091520:intron | 50.0% |
| TCTAGCCCCAAAATCCGATC+TGG | + | chr7_3:6809777-6809796 | Msa1091520:CDS | 50.0% | |
| GTAACCGCATATGCCGGTGT+TGG | - | chr7_3:6808528-6808547 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 6807528 | 6811260 | 6807528 | ID=Msa1091520;Name=Msa1091520 |
| chr7_3 | mRNA | 6807528 | 6811260 | 6807528 | ID=Msa1091520-mRNA-1;Parent=Msa1091520;Name=Msa1091520-mRNA-1;_AED=0.08;_eAED=0.08;_QI=125|1|1|1|1|1|6|318|239 |
| chr7_3 | exon | 6807528 | 6807700 | 6807528 | ID=Msa1091520-mRNA-1:exon:2129;Parent=Msa1091520-mRNA-1 |
| chr7_3 | exon | 6808674 | 6808878 | 6808674 | ID=Msa1091520-mRNA-1:exon:2130;Parent=Msa1091520-mRNA-1 |
| chr7_3 | exon | 6809698 | 6809798 | 6809698 | ID=Msa1091520-mRNA-1:exon:2131;Parent=Msa1091520-mRNA-1 |
| chr7_3 | exon | 6809971 | 6810099 | 6809971 | ID=Msa1091520-mRNA-1:exon:2132;Parent=Msa1091520-mRNA-1 |
| chr7_3 | exon | 6810195 | 6810283 | 6810195 | ID=Msa1091520-mRNA-1:exon:2133;Parent=Msa1091520-mRNA-1 |
| chr7_3 | exon | 6810795 | 6811260 | 6810795 | ID=Msa1091520-mRNA-1:exon:2134;Parent=Msa1091520-mRNA-1 |
| chr7_3 | five_prime_UTR | 6807528 | 6807652 | 6807528 | ID=Msa1091520-mRNA-1:five_prime_utr;Parent=Msa1091520-mRNA-1 |
| chr7_3 | CDS | 6807653 | 6807700 | 6807653 | ID=Msa1091520-mRNA-1:cds;Parent=Msa1091520-mRNA-1 |
| chr7_3 | CDS | 6808674 | 6808878 | 6808674 | ID=Msa1091520-mRNA-1:cds;Parent=Msa1091520-mRNA-1 |
| chr7_3 | CDS | 6809698 | 6809798 | 6809698 | ID=Msa1091520-mRNA-1:cds;Parent=Msa1091520-mRNA-1 |
| chr7_3 | CDS | 6809971 | 6810099 | 6809971 | ID=Msa1091520-mRNA-1:cds;Parent=Msa1091520-mRNA-1 |
| chr7_3 | CDS | 6810195 | 6810283 | 6810195 | ID=Msa1091520-mRNA-1:cds;Parent=Msa1091520-mRNA-1 |
| chr7_3 | CDS | 6810795 | 6810942 | 6810795 | ID=Msa1091520-mRNA-1:cds;Parent=Msa1091520-mRNA-1 |
| chr7_3 | three_prime_UTR | 6810943 | 6811260 | 6810943 | ID=Msa1091520-mRNA-1:three_prime_utr;Parent=Msa1091520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
