Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0124990 | XP_013468664.1 | 96.616 | 591 | 19 | 1 | 10 | 599 | 2 | 592 | 0.0 | 1199 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0124990 | sp|Q9LSW2|ARP9_ARATH | 60.504 | 595 | 222 | 2 | 7 | 598 | 11 | 595 | 0.0 | 749 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0124990 | A0A072VM47 | 96.616 | 591 | 19 | 1 | 10 | 599 | 2 | 592 | 0.0 | 1199 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002490 | Msa0124990 | 0.800520 | 1.386785e-48 | -8.615850e-47 |
Msa0016670 | Msa0124990 | 0.823066 | 1.692199e-53 | -8.615850e-47 |
Msa0021810 | Msa0124990 | 0.820171 | 7.897595e-53 | -8.615850e-47 |
Msa0028060 | Msa0124990 | 0.803636 | 3.172209e-49 | -8.615850e-47 |
Msa0029710 | Msa0124990 | 0.918091 | 2.387910e-86 | -8.615850e-47 |
Msa0032840 | Msa0124990 | -0.809806 | 1.577507e-50 | -8.615850e-47 |
Msa0041620 | Msa0124990 | 0.802130 | 6.492209e-49 | -8.615850e-47 |
Msa0043670 | Msa0124990 | -0.829602 | 4.696706e-55 | -8.615850e-47 |
Msa0044020 | Msa0124990 | 0.819910 | 9.062661e-53 | -8.615850e-47 |
Msa0047980 | Msa0124990 | 0.809070 | 2.268990e-50 | -8.615850e-47 |
Msa0048030 | Msa0124990 | 0.821861 | 3.224162e-53 | -8.615850e-47 |
Msa0057710 | Msa0124990 | 0.807634 | 4.592738e-50 | -8.615850e-47 |
Msa0073670 | Msa0124990 | 0.833631 | 4.773025e-56 | -8.615850e-47 |
Msa0074320 | Msa0124990 | 0.825992 | 3.462955e-54 | -8.615850e-47 |
Msa0076000 | Msa0124990 | 0.808920 | 2.442648e-50 | -8.615850e-47 |
Msa0077200 | Msa0124990 | 0.975835 | 1.095577e-140 | -8.615850e-47 |
Msa0090590 | Msa0124990 | 0.820683 | 6.025136e-53 | -8.615850e-47 |
Msa0092670 | Msa0124990 | -0.822252 | 2.617045e-53 | -8.615850e-47 |
Msa0092690 | Msa0124990 | -0.824844 | 6.477718e-54 | -8.615850e-47 |
Msa0092740 | Msa0124990 | -0.835514 | 1.605686e-56 | -8.615850e-47 |
Msa0094130 | Msa0124990 | 0.809279 | 2.046590e-50 | -8.615850e-47 |
Msa0094950 | Msa0124990 | 0.825468 | 4.610190e-54 | -8.615850e-47 |
Msa0095380 | Msa0124990 | 0.821693 | 3.526175e-53 | -8.615850e-47 |
Msa0096670 | Msa0124990 | 0.823109 | 1.652931e-53 | -8.615850e-47 |
Msa0110360 | Msa0124990 | 0.811445 | 6.977569e-51 | -8.615850e-47 |
Msa0110970 | Msa0124990 | 0.815349 | 9.674764e-52 | -8.615850e-47 |
Msa0120330 | Msa0124990 | 0.800052 | 1.726808e-48 | -8.615850e-47 |
Msa0122630 | Msa0124990 | 0.824242 | 8.977431e-54 | -8.615850e-47 |
Msa0124340 | Msa0124990 | 0.827297 | 1.691253e-54 | -8.615850e-47 |
Msa0124990 | Msa0127820 | 0.811445 | 6.976535e-51 | -8.615850e-47 |
Msa0124990 | Msa0137610 | -0.838366 | 3.000720e-57 | -8.615850e-47 |
Msa0124990 | Msa0138920 | 0.828087 | 1.092634e-54 | -8.615850e-47 |
Msa0124990 | Msa0146260 | 0.805657 | 1.200892e-49 | -8.615850e-47 |
Msa0124990 | Msa0146280 | 0.807095 | 5.974968e-50 | -8.615850e-47 |
Msa0124990 | Msa0169690 | 0.892986 | 9.561011e-75 | -8.615850e-47 |
Msa0124990 | Msa0183830 | 0.841144 | 5.676862e-58 | -8.615850e-47 |
Msa0124990 | Msa0185400 | 0.801993 | 6.928350e-49 | -8.615850e-47 |
Msa0124990 | Msa0186890 | 0.814662 | 1.374223e-51 | -8.615850e-47 |
Msa0124990 | Msa0187690 | 0.819791 | 9.647274e-53 | -8.615850e-47 |
Msa0124990 | Msa0194540 | 0.808121 | 3.618178e-50 | -8.615850e-47 |
Msa0124990 | Msa0197890 | 0.805663 | 1.197301e-49 | -8.615850e-47 |
Msa0124990 | Msa0199880 | 0.807758 | 4.323445e-50 | -8.615850e-47 |
Msa0124990 | Msa0222920 | 0.821468 | 3.973239e-53 | -8.615850e-47 |
Msa0124990 | Msa0223250 | 0.801919 | 7.175502e-49 | -8.615850e-47 |
Msa0124990 | Msa0225180 | 0.812856 | 3.434509e-51 | -8.615850e-47 |
Msa0124990 | Msa0225750 | 0.819938 | 8.929114e-53 | -8.615850e-47 |
Msa0124990 | Msa0226470 | 0.820094 | 8.223235e-53 | -8.615850e-47 |
Msa0124990 | Msa0227400 | 0.806043 | 9.960677e-50 | -8.615850e-47 |
Msa0124990 | Msa0230550 | -0.805006 | 1.644114e-49 | -8.615850e-47 |
Msa0124990 | Msa0241800 | 0.825687 | 4.092816e-54 | -8.615850e-47 |
Msa0124990 | Msa0242680 | 0.800963 | 1.126215e-48 | -8.615850e-47 |
Msa0124990 | Msa0255090 | 0.801556 | 8.515289e-49 | -8.615850e-47 |
Msa0124990 | Msa0259380 | 0.803233 | 3.844032e-49 | -8.615850e-47 |
Msa0124990 | Msa0259560 | 0.829860 | 4.063942e-55 | -8.615850e-47 |
Msa0124990 | Msa0260240 | 0.820088 | 8.251129e-53 | -8.615850e-47 |
Msa0124990 | Msa0260280 | 0.821660 | 3.588507e-53 | -8.615850e-47 |
Msa0124990 | Msa0260620 | 0.808755 | 2.650214e-50 | -8.615850e-47 |
Msa0124990 | Msa0264570 | 0.827695 | 1.357331e-54 | -8.615850e-47 |
Msa0124990 | Msa0268130 | 0.805082 | 1.584806e-49 | -8.615850e-47 |
Msa0124990 | Msa0277630 | 0.819025 | 1.442010e-52 | -8.615850e-47 |
Msa0124990 | Msa0292400 | 0.803768 | 2.977298e-49 | -8.615850e-47 |
Msa0124990 | Msa0294160 | 0.804820 | 1.798133e-49 | -8.615850e-47 |
Msa0124990 | Msa0298990 | 0.804925 | 1.708956e-49 | -8.615850e-47 |
Msa0124990 | Msa0304260 | 0.824233 | 9.020354e-54 | -8.615850e-47 |
Msa0124990 | Msa0304300 | 0.825490 | 4.557321e-54 | -8.615850e-47 |
Msa0124990 | Msa0307850 | 0.802074 | 6.667013e-49 | -8.615850e-47 |
Msa0124990 | Msa0317310 | 0.835568 | 1.555452e-56 | -8.615850e-47 |
Msa0124990 | Msa0355270 | 0.831210 | 1.899229e-55 | -8.615850e-47 |
Msa0124990 | Msa0360990 | 0.806691 | 7.275843e-50 | -8.615850e-47 |
Msa0124990 | Msa0378080 | 0.810301 | 1.234104e-50 | -8.615850e-47 |
Msa0124990 | Msa0378980 | 0.845918 | 3.008422e-59 | -8.615850e-47 |
Msa0124990 | Msa0395870 | 0.806866 | 6.680369e-50 | -8.615850e-47 |
Msa0124990 | Msa0402330 | 0.819059 | 1.416860e-52 | -8.615850e-47 |
Msa0124990 | Msa0410500 | 0.838388 | 2.962816e-57 | -8.615850e-47 |
Msa0124990 | Msa0413450 | 0.826443 | 2.705645e-54 | -8.615850e-47 |
Msa0124990 | Msa0423040 | 0.801400 | 9.166741e-49 | -8.615850e-47 |
Msa0124990 | Msa0423360 | -0.807341 | 5.300092e-50 | -8.615850e-47 |
Msa0124990 | Msa0423900 | 0.812477 | 4.158047e-51 | -8.615850e-47 |
Msa0124990 | Msa0425940 | 0.815822 | 7.591723e-52 | -8.615850e-47 |
Msa0124990 | Msa0426160 | 0.816605 | 5.072543e-52 | -8.615850e-47 |
Msa0124990 | Msa0441130 | 0.803481 | 3.415766e-49 | -8.615850e-47 |
Msa0124990 | Msa0453230 | 0.800582 | 1.347039e-48 | -8.615850e-47 |
Msa0124990 | Msa0469910 | -0.833658 | 4.698262e-56 | -8.615850e-47 |
Msa0124990 | Msa0472380 | 0.805099 | 1.571941e-49 | -8.615850e-47 |
Msa0124990 | Msa0474950 | 0.800853 | 1.185776e-48 | -8.615850e-47 |
Msa0124990 | Msa0475790 | 0.801527 | 8.633782e-49 | -8.615850e-47 |
Msa0124990 | Msa0485990 | 0.808857 | 2.520547e-50 | -8.615850e-47 |
Msa0124990 | Msa0505150 | 0.812497 | 4.116130e-51 | -8.615850e-47 |
Msa0124990 | Msa0518040 | 0.801632 | 8.217048e-49 | -8.615850e-47 |
Msa0124990 | Msa0521880 | 0.823452 | 1.374871e-53 | -8.615850e-47 |
Msa0124990 | Msa0525340 | 0.809016 | 2.330391e-50 | -8.615850e-47 |
Msa0124990 | Msa0541860 | 0.813817 | 2.112422e-51 | -8.615850e-47 |
Msa0124990 | Msa0557070 | 0.800338 | 1.510193e-48 | -8.615850e-47 |
Msa0124990 | Msa0560470 | 0.849514 | 3.080042e-60 | -8.615850e-47 |
Msa0124990 | Msa0574890 | 0.819659 | 1.033950e-52 | -8.615850e-47 |
Msa0124990 | Msa0576690 | 0.859387 | 4.285528e-63 | -8.615850e-47 |
Msa0124990 | Msa0576940 | 0.808554 | 2.925841e-50 | -8.615850e-47 |
Msa0124990 | Msa0577390 | 0.828908 | 6.921317e-55 | -8.615850e-47 |
Msa0124990 | Msa0591060 | 0.814093 | 1.835733e-51 | -8.615850e-47 |
Msa0124990 | Msa0609450 | 0.802345 | 5.863745e-49 | -8.615850e-47 |
Msa0124990 | Msa0618040 | 0.810702 | 1.010774e-50 | -8.615850e-47 |
Msa0124990 | Msa0619510 | 0.803617 | 3.200193e-49 | -8.615850e-47 |
Msa0124990 | Msa0620990 | 0.830602 | 2.677583e-55 | -8.615850e-47 |
Msa0124990 | Msa0639120 | 0.846570 | 1.998535e-59 | -8.615850e-47 |
Msa0124990 | Msa0642720 | 0.811145 | 8.104038e-51 | -8.615850e-47 |
Msa0124990 | Msa0650090 | 0.803371 | 3.599342e-49 | -8.615850e-47 |
Msa0124990 | Msa0669850 | 0.817003 | 4.130068e-52 | -8.615850e-47 |
Msa0124990 | Msa0677290 | 0.855442 | 6.291576e-62 | -8.615850e-47 |
Msa0124990 | Msa0678860 | 0.804020 | 2.639558e-49 | -8.615850e-47 |
Msa0124990 | Msa0687630 | 0.810576 | 1.075975e-50 | -8.615850e-47 |
Msa0124990 | Msa0692080 | 0.819759 | 9.812534e-53 | -8.615850e-47 |
Msa0124990 | Msa0701280 | 0.820124 | 8.093611e-53 | -8.615850e-47 |
Msa0124990 | Msa0703230 | 0.812134 | 4.939437e-51 | -8.615850e-47 |
Msa0124990 | Msa0704600 | 0.805138 | 1.542644e-49 | -8.615850e-47 |
Msa0124990 | Msa0734960 | 0.804831 | 1.788209e-49 | -8.615850e-47 |
Msa0124990 | Msa0750880 | 0.800360 | 1.495110e-48 | -8.615850e-47 |
Msa0124990 | Msa0750920 | 0.810171 | 1.316212e-50 | -8.615850e-47 |
Msa0124990 | Msa0755340 | 0.806369 | 8.506257e-50 | -8.615850e-47 |
Msa0124990 | Msa0760380 | 0.812571 | 3.964065e-51 | -8.615850e-47 |
Msa0124990 | Msa0766740 | 0.806498 | 7.988300e-50 | -8.615850e-47 |
Msa0124990 | Msa0778320 | 0.802064 | 6.697928e-49 | -8.615850e-47 |
Msa0124990 | Msa0786270 | 0.802340 | 5.878228e-49 | -8.615850e-47 |
Msa0124990 | Msa0787750 | 0.825381 | 4.836107e-54 | -8.615850e-47 |
Msa0124990 | Msa0822990 | 0.814463 | 1.521426e-51 | -8.615850e-47 |
Msa0124990 | Msa0824640 | 0.807759 | 4.320450e-50 | -8.615850e-47 |
Msa0124990 | Msa0831580 | 0.810483 | 1.127063e-50 | -8.615850e-47 |
Msa0124990 | Msa0840260 | 0.825107 | 5.612649e-54 | -8.615850e-47 |
Msa0124990 | Msa0850960 | 0.829827 | 4.138960e-55 | -8.615850e-47 |
Msa0124990 | Msa0863370 | 0.809607 | 1.740797e-50 | -8.615850e-47 |
Msa0124990 | Msa0864010 | 0.816384 | 5.686285e-52 | -8.615850e-47 |
Msa0124990 | Msa0909230 | 0.809392 | 1.935769e-50 | -8.615850e-47 |
Msa0124990 | Msa0930780 | 0.864630 | 1.059120e-64 | -8.615850e-47 |
Msa0124990 | Msa0937670 | 0.827888 | 1.220118e-54 | -8.615850e-47 |
Msa0124990 | Msa0948250 | 0.806649 | 7.422713e-50 | -8.615850e-47 |
Msa0124990 | Msa0970520 | 0.820216 | 7.710672e-53 | -8.615850e-47 |
Msa0124990 | Msa0976330 | 0.800735 | 1.253724e-48 | -8.615850e-47 |
Msa0124990 | Msa1000940 | 0.803936 | 2.747882e-49 | -8.615850e-47 |
Msa0124990 | Msa1012810 | 0.806146 | 9.478250e-50 | -8.615850e-47 |
Msa0124990 | Msa1018050 | 0.820448 | 6.822747e-53 | -8.615850e-47 |
Msa0124990 | Msa1019240 | 0.803523 | 3.346652e-49 | -8.615850e-47 |
Msa0124990 | Msa1019260 | 0.807944 | 3.946088e-50 | -8.615850e-47 |
Msa0124990 | Msa1037920 | 0.805893 | 1.071256e-49 | -8.615850e-47 |
Msa0124990 | Msa1063950 | 0.804246 | 2.368124e-49 | -8.615850e-47 |
Msa0124990 | Msa1065370 | 0.813516 | 2.460486e-51 | -8.615850e-47 |
Msa0124990 | Msa1082700 | 0.814400 | 1.570614e-51 | -8.615850e-47 |
Msa0124990 | Msa1084470 | 0.823550 | 1.304232e-53 | -8.615850e-47 |
Msa0124990 | Msa1091520 | 0.826360 | 2.831988e-54 | -8.615850e-47 |
Msa0124990 | Msa1094420 | 0.803524 | 3.346237e-49 | -8.615850e-47 |
Msa0124990 | Msa1097640 | 0.823935 | 1.059268e-53 | -8.615850e-47 |
Msa0124990 | Msa1104210 | 0.805532 | 1.275465e-49 | -8.615850e-47 |
Msa0124990 | Msa1106700 | 0.816973 | 4.194964e-52 | -8.615850e-47 |
Msa0124990 | Msa1111110 | 0.801622 | 8.256240e-49 | -8.615850e-47 |
Msa0124990 | Msa1119200 | 0.823959 | 1.045643e-53 | -8.615850e-47 |
Msa0124990 | Msa1126510 | 0.809432 | 1.897570e-50 | -8.615850e-47 |
Msa0124990 | Msa1139810 | 0.824150 | 9.431691e-54 | -8.615850e-47 |
Msa0124990 | Msa1143650 | 0.818282 | 2.126529e-52 | -8.615850e-47 |
Msa0124990 | Msa1166860 | 0.801234 | 9.911106e-49 | -8.615850e-47 |
Msa0124990 | Msa1174100 | 0.822030 | 2.945220e-53 | -8.615850e-47 |
Msa0124990 | Msa1185540 | 0.808589 | 2.875549e-50 | -8.615850e-47 |
Msa0124990 | Msa1201650 | 0.823094 | 1.666232e-53 | -8.615850e-47 |
Msa0124990 | Msa1218140 | 0.819956 | 8.846579e-53 | -8.615850e-47 |
Msa0124990 | Msa1226620 | 0.837049 | 6.535897e-57 | -8.615850e-47 |
Msa0124990 | Msa1228890 | 0.827106 | 1.879356e-54 | -8.615850e-47 |
Msa0124990 | Msa1231550 | 0.803819 | 2.905298e-49 | -8.615850e-47 |
Msa0124990 | Msa1242180 | 0.810988 | 8.763938e-51 | -8.615850e-47 |
Msa0124990 | Msa1252190 | 0.881137 | 3.082465e-70 | -8.615850e-47 |
Msa0124990 | Msa1254610 | 0.824253 | 8.923868e-54 | -8.615850e-47 |
Msa0124990 | Msa1254710 | 0.803735 | 3.024719e-49 | -8.615850e-47 |
Msa0124990 | Msa1261010 | 0.830150 | 3.453913e-55 | -8.615850e-47 |
Msa0124990 | Msa1274060 | 0.844885 | 5.728585e-59 | -8.615850e-47 |
Msa0124990 | Msa1274280 | 0.852461 | 4.547432e-61 | -8.615850e-47 |
Msa0124990 | Msa1280560 | 0.801021 | 1.096102e-48 | -8.615850e-47 |
Msa0124990 | Msa1281190 | 0.804181 | 2.443643e-49 | -8.615850e-47 |
Msa0124990 | Msa1283910 | 0.810265 | 1.255890e-50 | -8.615850e-47 |
Msa0124990 | Msa1283990 | 0.810508 | 1.113338e-50 | -8.615850e-47 |
Msa0124990 | Msa1284520 | 0.817237 | 3.659036e-52 | -8.615850e-47 |
Msa0124990 | Msa1292830 | 0.856052 | 4.174760e-62 | -8.615850e-47 |
Msa0124990 | Msa1307950 | 0.800866 | 1.178774e-48 | -8.615850e-47 |
Msa0124990 | Msa1335940 | 0.814954 | 1.183926e-51 | -8.615850e-47 |
Msa0124990 | Msa1341070 | 0.822753 | 2.001302e-53 | -8.615850e-47 |
Msa0124990 | Msa1343070 | 0.824293 | 8.731415e-54 | -8.615850e-47 |
Msa0124990 | Msa1353060 | 0.809561 | 1.780278e-50 | -8.615850e-47 |
Msa0124990 | Msa1362510 | 0.804781 | 1.831735e-49 | -8.615850e-47 |
Msa0124990 | Msa1365150 | 0.821135 | 4.741843e-53 | -8.615850e-47 |
Msa0124990 | Msa1367880 | 0.814835 | 1.258480e-51 | -8.615850e-47 |
Msa0124990 | Msa1369150 | 0.806768 | 7.007487e-50 | -8.615850e-47 |
Msa0124990 | Msa1371430 | 0.811011 | 8.664947e-51 | -8.615850e-47 |
Msa0124990 | Msa1373330 | 0.818173 | 2.250007e-52 | -8.615850e-47 |
Msa0124990 | Msa1374040 | 0.803544 | 3.314607e-49 | -8.615850e-47 |
Msa0124990 | Msa1379570 | 0.810418 | 1.164328e-50 | -8.615850e-47 |
Msa0124990 | Msa1382310 | 0.811529 | 6.690828e-51 | -8.615850e-47 |
Msa0124990 | Msa1385100 | 0.809020 | 2.325336e-50 | -8.615850e-47 |
Msa0124990 | Msa1389950 | 0.833006 | 6.831945e-56 | -8.615850e-47 |
Msa0124990 | Msa1397050 | 0.807678 | 4.495085e-50 | -8.615850e-47 |
Msa0124990 | Msa1398480 | 0.804128 | 2.506372e-49 | -8.615850e-47 |
Msa0124990 | Msa1404730 | 0.820119 | 8.115162e-53 | -8.615850e-47 |
Msa0124990 | Msa1406040 | 0.870564 | 1.326680e-66 | -8.615850e-47 |
Msa0124990 | Msa1427060 | 0.836616 | 8.431814e-57 | -8.615850e-47 |
Msa0124990 | Msa1438640 | 0.801060 | 1.076035e-48 | -8.615850e-47 |
Msa0124990 | Msa1439960 | 0.801351 | 9.381552e-49 | -8.615850e-47 |
Msa0124990 | Msa1440260 | -0.837409 | 5.287079e-57 | -8.615850e-47 |
Msa0124990 | Msa1445500 | 0.810011 | 1.424890e-50 | -8.615850e-47 |
Msa0124990 | Msa1447240 | 0.817125 | 3.878443e-52 | -8.615850e-47 |
Msa0124990 | Msa1448690 | 0.804114 | 2.522803e-49 | -8.615850e-47 |
Msa0124990 | Msa1459180 | 0.805778 | 1.132753e-49 | -8.615850e-47 |
Msa0124990 | Msa1459380 | 0.820746 | 5.826846e-53 | -8.615850e-47 |
Msa0124990 | Msa1461490 | 0.806376 | 8.475941e-50 | -8.615850e-47 |
Msa0124990 | Msa1466990 | 0.821503 | 3.899630e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0124990 | MtrunA17_Chr1g0186521 | 96.616 | 591 | 19 | 1 | 10 | 599 | 2 | 592 | 0.0 | 1199 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0124990 | AT5G43500.1 | 60.504 | 595 | 222 | 2 | 7 | 598 | 11 | 595 | 0.0 | 749 |
Msa0124990 | AT5G43500.2 | 60.811 | 592 | 219 | 2 | 10 | 598 | 2 | 583 | 0.0 | 747 |
Msa0124990 | AT5G43500.4 | 59.600 | 500 | 189 | 2 | 7 | 503 | 11 | 500 | 0.0 | 613 |
Msa0124990 | AT5G43500.3 | 59.960 | 497 | 186 | 2 | 10 | 503 | 2 | 488 | 0.0 | 612 |
Find 152 sgRNAs with CRISPR-Local
Find 513 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAAATCTGTACCTTCTTT+TGG | 0.143352 | 1_3:+52975038 | None:intergenic |
TTGAAATACCTATAAATTAA+TGG | 0.158674 | 1_3:-52969415 | Msa0124990:three_prime_UTR |
ACTTTAATCCATTAATTTAT+AGG | 0.181310 | 1_3:+52969407 | None:intergenic |
GTGAAGGAAGCGCAGATTTA+AGG | 0.219002 | 1_3:+52977389 | None:intergenic |
CCACGATTATCAAATGTTTC+TGG | 0.235555 | 1_3:+52974247 | None:intergenic |
TGATCTTGAACATTCTTCTT+AGG | 0.237962 | 1_3:+52977104 | None:intergenic |
GGTACAGATTTGAAGGAAAT+TGG | 0.238968 | 1_3:-52975029 | Msa0124990:CDS |
ACTTTCTATCACAATGTTAA+TGG | 0.242936 | 1_3:-52970700 | Msa0124990:CDS |
ATTCTTGGAGTACTTGATTT+AGG | 0.248981 | 1_3:-52969564 | Msa0124990:three_prime_UTR |
ACTGTTGAAGATACCGTTTC+TGG | 0.255750 | 1_3:-52976331 | Msa0124990:CDS |
ATAGATTACTGCTAATTTCA+TGG | 0.260106 | 1_3:-52969682 | Msa0124990:three_prime_UTR |
CTTCTAAAGTTTCGACGTTC+AGG | 0.269380 | 1_3:-52978442 | Msa0124990:CDS |
ATGCAATGAGGGATATTATA+AGG | 0.277489 | 1_3:+52977149 | None:intergenic |
TTGAGGATCTACGTTCTATT+TGG | 0.279989 | 1_3:-52974342 | Msa0124990:CDS |
GTATTACATGAATTGAATTC+TGG | 0.280774 | 1_3:-52969462 | Msa0124990:three_prime_UTR |
ACTGTATCAATTGCTTCATT+TGG | 0.293011 | 1_3:+52970179 | None:intergenic |
AAGTAAATTCAATTGATTCT+TGG | 0.311421 | 1_3:-52969579 | Msa0124990:three_prime_UTR |
TCGTCTTCAGTTTCAGCATT+AGG | 0.312854 | 1_3:-52975554 | Msa0124990:intron |
GGTTCTGCAAATATTAGAAT+TGG | 0.330623 | 1_3:-52977191 | Msa0124990:CDS |
GTCGGACATGTCAGACCTTC+GGG | 0.346155 | 1_3:+52970723 | None:intergenic |
AGATGAGACTAGTGAGTCTT+TGG | 0.346917 | 1_3:-52975063 | Msa0124990:CDS |
AACATATCTGTTCGAATTTG+TGG | 0.349833 | 1_3:+52971816 | None:intergenic |
GTAGGGATGCATGAATAAAT+TGG | 0.361878 | 1_3:-52969542 | Msa0124990:three_prime_UTR |
TGAGGATCTACGTTCTATTT+GGG | 0.364966 | 1_3:-52974341 | Msa0124990:CDS |
ATTCTTCTTAGGAACTTGTT+TGG | 0.368771 | 1_3:+52977115 | None:intergenic |
CATGCCACAAACAGAAATAA+AGG | 0.379273 | 1_3:-52974112 | Msa0124990:intron |
CTTACGAGGGAAAGAGTTAC+TGG | 0.381614 | 1_3:+52976296 | None:intergenic |
GTAGGGATGCATGGATAAAT+CGG | 0.385530 | 1_3:-52969832 | Msa0124990:CDS |
TAAGAAGAATGTTCAAGATC+AGG | 0.389217 | 1_3:-52977102 | Msa0124990:intron |
GTATCAATTGCTTCATTTGG+AGG | 0.400578 | 1_3:+52970182 | None:intergenic |
GCTATTAGGTTATACAATCA+AGG | 0.404540 | 1_3:-52970033 | Msa0124990:intron |
AGTTACAACTGCACAGCATA+TGG | 0.406231 | 1_3:-52976473 | Msa0124990:CDS |
ATTGGACGACATAAACAATA+TGG | 0.409714 | 1_3:+52974939 | None:intergenic |
TGCAAATATTAGAATTGGAT+TGG | 0.415664 | 1_3:-52977186 | Msa0124990:CDS |
TGCAATGAGGGATATTATAA+GGG | 0.416246 | 1_3:+52977150 | None:intergenic |
GGAAATTCTATCTGTAGTAC+TGG | 0.418480 | 1_3:-52974091 | Msa0124990:CDS |
TGTGTTACATGAATTCTTGA+AGG | 0.424584 | 1_3:-52969730 | Msa0124990:exon |
TGGGTTGATTACAACGAGAT+TGG | 0.431225 | 1_3:+52977345 | None:intergenic |
TTCGAATTTGTGGCCAGGTC+TGG | 0.433048 | 1_3:+52971826 | None:intergenic |
CATGGATAAATCGGGAAGAC+TGG | 0.438222 | 1_3:-52969823 | Msa0124990:CDS |
GCACAGATGGGGCGCGCTGA+TGG | 0.454386 | 1_3:-52975641 | Msa0124990:intron |
ACAGCTTGTGTAGTGAATAT+TGG | 0.458030 | 1_3:-52973883 | Msa0124990:CDS |
AAAAGAAGGTACAGATTTGA+AGG | 0.461794 | 1_3:-52975036 | Msa0124990:CDS |
TGTCGGACATGTCAGACCTT+CGG | 0.465786 | 1_3:+52970722 | None:intergenic |
ATCTACGTTCTATTTGGGAC+TGG | 0.465973 | 1_3:-52974336 | Msa0124990:CDS |
TATTGCATAGGTTCCTCCTA+TGG | 0.468761 | 1_3:-52970949 | Msa0124990:intron |
GGAAAGATTCACCCTTCACT+TGG | 0.475731 | 1_3:-52975604 | Msa0124990:CDS |
CATTTGTGTCATGGAAGGGC+GGG | 0.476693 | 1_3:-52970000 | Msa0124990:CDS |
ATCCTCCTCCACCACGGACT+TGG | 0.480153 | 1_3:-52970890 | Msa0124990:intron |
TTCAAATGTCCTCTGCGGAT+TGG | 0.480699 | 1_3:+52974921 | None:intergenic |
TGGCACCACTTTGTCCTCAT+AGG | 0.480851 | 1_3:+52971087 | None:intergenic |
CCCTTCCATGACACAAATGT+TGG | 0.481668 | 1_3:+52970004 | None:intergenic |
AGTCTTGTCTTGTGAGATCC+TGG | 0.484114 | 1_3:+52971067 | None:intergenic |
CAGTAACTCTTTCCCTCGTA+AGG | 0.484178 | 1_3:-52976295 | Msa0124990:intron |
AAGTTCAGAAAGTTCATTTG+TGG | 0.487448 | 1_3:-52974993 | Msa0124990:CDS |
TAGTTCCTGCAGTTGAAGAA+AGG | 0.489413 | 1_3:-52970333 | Msa0124990:intron |
GGCGGCGTGGCTCTGACAAA+TGG | 0.490488 | 1_3:-52970358 | Msa0124990:CDS |
GTACTGGAAGAACTCTGCTT+TGG | 0.490704 | 1_3:-52974075 | Msa0124990:CDS |
TTTAACATTAACAGATCGAT+TGG | 0.492015 | 1_3:+52971786 | None:intergenic |
ATCTGTTCGAATTTGTGGCC+AGG | 0.492395 | 1_3:+52971821 | None:intergenic |
TTCTAAAGTTTCGACGTTCA+GGG | 0.495923 | 1_3:-52978441 | Msa0124990:intron |
TGGCTCAGCAGTGGTGCACC+AGG | 0.497650 | 1_3:-52974055 | Msa0124990:intron |
GAAACTTTAAGATGTATGAC+AGG | 0.507930 | 1_3:+52969707 | None:intergenic |
ATTGCATAGGTTCCTCCTAT+GGG | 0.508669 | 1_3:-52970948 | Msa0124990:intron |
ACAGCATATGGAAAGGGAAA+AGG | 0.511763 | 1_3:-52976461 | Msa0124990:CDS |
ATTCTTGGAGTACTTGATGT+AGG | 0.512582 | 1_3:-52969854 | Msa0124990:CDS |
CTATTAGGTTATACAATCAA+GGG | 0.512637 | 1_3:-52970032 | Msa0124990:intron |
ACAAACCTTTCTTCAACTGC+AGG | 0.513692 | 1_3:+52970328 | None:intergenic |
ACCAACTGCATTCTCTCAGC+TGG | 0.513823 | 1_3:-52970595 | Msa0124990:intron |
AACCAAGTCCGTGGTGGAGG+AGG | 0.516033 | 1_3:+52970888 | None:intergenic |
TATGAGGACAAAGTGGTGCC+AGG | 0.517306 | 1_3:-52971085 | Msa0124990:CDS |
TGTAGTGAATATTGGTGCTC+AGG | 0.518128 | 1_3:-52973875 | Msa0124990:CDS |
TGCAGTAGTTCATTCCTATG+AGG | 0.519165 | 1_3:-52971101 | Msa0124990:CDS |
CACAAAGACATCACCAGACC+TGG | 0.520166 | 1_3:-52971839 | Msa0124990:CDS |
CATAAACAATATGGTTCAGT+GGG | 0.521195 | 1_3:+52974948 | None:intergenic |
TTGGAGTACTTGATTTAGGT+AGG | 0.524708 | 1_3:-52969560 | Msa0124990:three_prime_UTR |
TGGAGTACTTGATTTAGGTA+GGG | 0.527586 | 1_3:-52969559 | Msa0124990:three_prime_UTR |
ATTTGTGTCATGGAAGGGCG+GGG | 0.530610 | 1_3:-52969999 | Msa0124990:CDS |
TTGATGTAGGTAGGGATGCA+TGG | 0.532058 | 1_3:-52969841 | Msa0124990:CDS |
TTGGAGTACTTGATGTAGGT+AGG | 0.535455 | 1_3:-52969850 | Msa0124990:CDS |
TGGAGTACTTGATGTAGGTA+GGG | 0.535632 | 1_3:-52969849 | Msa0124990:CDS |
TTCTATCACAATGTTAATGG+AGG | 0.539658 | 1_3:-52970697 | Msa0124990:CDS |
TCCAACATTTGTGTCATGGA+AGG | 0.542569 | 1_3:-52970005 | Msa0124990:CDS |
AACTGCACAGCATATGGAAA+GGG | 0.542759 | 1_3:-52976467 | Msa0124990:CDS |
CACTTGGACTAATGTTTACG+AGG | 0.545644 | 1_3:-52975588 | Msa0124990:CDS |
CAAATCCAACATTTGTGTCA+TGG | 0.547362 | 1_3:-52970009 | Msa0124990:CDS |
TAGGGATGCATGGATAAATC+GGG | 0.548359 | 1_3:-52969831 | Msa0124990:CDS |
ACTAACCAAGTCCGTGGTGG+AGG | 0.552841 | 1_3:+52970885 | None:intergenic |
GGTGGAGGAGGATACACATC+AGG | 0.561073 | 1_3:+52970900 | None:intergenic |
GTGACATGTACCTGCTGCAT+GGG | 0.562567 | 1_3:+52974882 | None:intergenic |
CCAGAAACATTTGATAATCG+TGG | 0.568663 | 1_3:-52974247 | Msa0124990:intron |
GACATCAATTATATGCATAG+AGG | 0.569721 | 1_3:-52973851 | Msa0124990:intron |
AGCTGGATAACTTTCCCACA+TGG | 0.579450 | 1_3:+52970669 | None:intergenic |
TACATGTTTCTTTCATTGCG+AGG | 0.582238 | 1_3:+52974289 | None:intergenic |
GAGTCTTTGGACCCAAAAGA+AGG | 0.582561 | 1_3:-52975050 | Msa0124990:CDS |
GAAGGTTCTTCATCCAGAAA+CGG | 0.582688 | 1_3:+52976318 | None:intergenic |
TATAATGAGCAATGCAATGA+GGG | 0.584288 | 1_3:+52977138 | None:intergenic |
ACATAAACAATATGGTTCAG+TGG | 0.591646 | 1_3:+52974947 | None:intergenic |
TCTATCACAATGTTAATGGA+GGG | 0.595323 | 1_3:-52970696 | Msa0124990:CDS |
AGGATATGCTAGAAGATACA+TGG | 0.596286 | 1_3:-52970759 | Msa0124990:CDS |
CCAACATTTGTGTCATGGAA+GGG | 0.599203 | 1_3:-52970004 | Msa0124990:CDS |
CAGAAAGTTCATTTGTGGCG+AGG | 0.601311 | 1_3:-52974988 | Msa0124990:CDS |
GATGTCTTTGTGTATAGAGA+AGG | 0.601867 | 1_3:+52971850 | None:intergenic |
ACCAGCTGAGAGAATGCAGT+TGG | 0.602297 | 1_3:+52970594 | None:intergenic |
CGTTCTGACATAACTTGTGA+AGG | 0.603077 | 1_3:+52977373 | None:intergenic |
TACATGAATTGAATTCTGGA+AGG | 0.604909 | 1_3:-52969458 | Msa0124990:three_prime_UTR |
CGAGGGAAAGAGTTACTGGA+AGG | 0.606527 | 1_3:+52976300 | None:intergenic |
CGGGAAGACTGGATTCAAAG+TGG | 0.607187 | 1_3:-52969812 | Msa0124990:CDS |
GGGAAGACTGGATTCAAAGT+GGG | 0.609217 | 1_3:-52969811 | Msa0124990:CDS |
GTAAACATTAGTCCAAGTGA+AGG | 0.610678 | 1_3:+52975592 | None:intergenic |
GGATGCATGAATAAATTGGT+AGG | 0.612056 | 1_3:-52969538 | Msa0124990:three_prime_UTR |
ACAACACTATCCCATGCAGC+AGG | 0.612753 | 1_3:-52974892 | Msa0124990:intron |
ACATTTGTGTCATGGAAGGG+CGG | 0.614236 | 1_3:-52970001 | Msa0124990:CDS |
TGGAAGTAACAGAAAATACA+AGG | 0.617533 | 1_3:-52969780 | Msa0124990:CDS |
ATTCAAAGTGGGATTCACGT+TGG | 0.618245 | 1_3:-52969800 | Msa0124990:CDS |
AAATGAAGCAATTGATACAG+TGG | 0.621512 | 1_3:-52970177 | Msa0124990:CDS |
CAACTGCACAGCATATGGAA+AGG | 0.621679 | 1_3:-52976468 | Msa0124990:CDS |
TATCTTCTAGCATATCCTCA+TGG | 0.625355 | 1_3:+52970764 | None:intergenic |
GGATAGAACAATCCCATAGG+AGG | 0.628934 | 1_3:+52970936 | None:intergenic |
ACTCTGCTTTGGCTCAGCAG+TGG | 0.631545 | 1_3:-52974064 | Msa0124990:CDS |
TAAACATTAGTCCAAGTGAA+GGG | 0.632014 | 1_3:+52975593 | None:intergenic |
AGAAAATCTTGGCCTTGCAG+AGG | 0.635161 | 1_3:-52970623 | Msa0124990:CDS |
AAGAAATCATATACCTTACG+AGG | 0.639184 | 1_3:+52976282 | None:intergenic |
GTTGGATAGAACAATCCCAT+AGG | 0.642202 | 1_3:+52970933 | None:intergenic |
GCTGGATAACTTTCCCACAT+GGG | 0.649782 | 1_3:+52970670 | None:intergenic |
TGCTAGGTTTAATGACCATG+AGG | 0.650205 | 1_3:-52970779 | Msa0124990:intron |
TTATCAGGAAGGACTTGCTG+CGG | 0.652812 | 1_3:-52973926 | Msa0124990:intron |
TGTGTCATGGAAGGGCGGGG+CGG | 0.653067 | 1_3:-52969996 | Msa0124990:intron |
TGCACTAACCAAGTCCGTGG+TGG | 0.653843 | 1_3:+52970882 | None:intergenic |
AACATTGTGATAGAAAGTGT+CGG | 0.656239 | 1_3:+52970705 | None:intergenic |
GCAATGAGGGATATTATAAG+GGG | 0.657448 | 1_3:+52977151 | None:intergenic |
TCATTCCTATGAGGACAAAG+TGG | 0.658798 | 1_3:-52971092 | Msa0124990:CDS |
TGAAGCAATTGATACAGTGG+AGG | 0.664138 | 1_3:-52970174 | Msa0124990:intron |
TCAAAATAACTGAAAACACA+AGG | 0.664680 | 1_3:-52969513 | Msa0124990:three_prime_UTR |
AGTGACATGTACCTGCTGCA+TGG | 0.665261 | 1_3:+52974881 | None:intergenic |
AATCTCGTTGTAATCAACCC+AGG | 0.667580 | 1_3:-52977343 | Msa0124990:intron |
AGTTGGTAATAGCCTCTGCA+AGG | 0.670862 | 1_3:+52970611 | None:intergenic |
GAATGCACTAACCAAGTCCG+TGG | 0.674854 | 1_3:+52970879 | None:intergenic |
GTATAATGAGCAATGCAATG+AGG | 0.675081 | 1_3:+52977137 | None:intergenic |
ATGTGTATCCTCCTCCACCA+CGG | 0.675895 | 1_3:-52970896 | Msa0124990:CDS |
AGAAATCATATACCTTACGA+GGG | 0.682496 | 1_3:+52976283 | None:intergenic |
TTGGACTAATGTTTACGAGG+AGG | 0.691273 | 1_3:-52975585 | Msa0124990:CDS |
TCTGGAATAGACTGGCGGCG+TGG | 0.691757 | 1_3:-52970371 | Msa0124990:intron |
AAGGGTGAATCTTTCCTGTG+TGG | 0.694794 | 1_3:+52975611 | None:intergenic |
AAATATTCAAATGTCCTCTG+CGG | 0.696571 | 1_3:+52974916 | None:intergenic |
TAAACAATATGGTTCAGTGG+GGG | 0.697515 | 1_3:+52974950 | None:intergenic |
CTGATGGACAAAATCCACAC+AGG | 0.705164 | 1_3:-52975625 | Msa0124990:CDS |
TCACAAGTTATGTCAGAACG+TGG | 0.710551 | 1_3:-52977370 | Msa0124990:CDS |
TTATGTCGTCCAATCCGCAG+AGG | 0.714929 | 1_3:-52974930 | Msa0124990:CDS |
TTAATGGAGGGATGCCCATG+TGG | 0.717952 | 1_3:-52970684 | Msa0124990:CDS |
TAATGGAGGGATGCCCATGT+GGG | 0.735919 | 1_3:-52970683 | Msa0124990:CDS |
ATAAACAATATGGTTCAGTG+GGG | 0.752024 | 1_3:+52974949 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACTGATTTTTTTTTTTATAA+AGG | + | chr1_3:52969616-52969635 | None:intergenic | 10.0% |
!!! | AATAAAACTAAGTTTTTTTA+GGG | + | chr1_3:52969736-52969755 | None:intergenic | 10.0% |
!!! | AAATAAAACTAAGTTTTTTT+AGG | + | chr1_3:52969737-52969756 | None:intergenic | 10.0% |
!!! | TATTTTATTTCGTTAATTTA+TGG | - | chr1_3:52970780-52970799 | Msa0124990:intron | 10.0% |
!! | TTATTTATTTCGTTAATTTA+TGG | - | chr1_3:52970965-52970984 | Msa0124990:intron | 10.0% |
!!! | TTTGTTATAATACTTTATAA+TGG | - | chr1_3:52971637-52971656 | Msa0124990:intron | 10.0% |
!!! | TTTTTTTAATTAAATAAGCA+CGG | + | chr1_3:52975802-52975821 | None:intergenic | 10.0% |
!!! | ATAAAACTAAGTTTTTTTAG+GGG | + | chr1_3:52969735-52969754 | None:intergenic | 15.0% |
!! | TCTATTGTATGAAATTAAAA+AGG | - | chr1_3:52969941-52969960 | Msa0124990:intron | 15.0% |
!! | TTACTCAAATATAAATACAA+CGG | - | chr1_3:52970004-52970023 | Msa0124990:CDS | 15.0% |
!! | ACAAAATTGTTAAATTGAAA+GGG | + | chr1_3:52970414-52970433 | None:intergenic | 15.0% |
!! | AACAAAATTGTTAAATTGAA+AGG | + | chr1_3:52970415-52970434 | None:intergenic | 15.0% |
!! | AAATAAATAATTCAAAAACC+TGG | + | chr1_3:52970955-52970974 | None:intergenic | 15.0% |
!!! | AACAATTTTTTTAATTTGCA+TGG | - | chr1_3:52971164-52971183 | Msa0124990:intron | 15.0% |
!! | TTATAATACTTTATAATGGT+TGG | - | chr1_3:52971641-52971660 | Msa0124990:intron | 15.0% |
!! | AAAAATAAAAAATTCTCACA+TGG | - | chr1_3:52972481-52972500 | Msa0124990:intron | 15.0% |
!! | AACTTAAATTGAATACATTT+GGG | + | chr1_3:52973001-52973020 | None:intergenic | 15.0% |
!! | TAACTTAAATTGAATACATT+TGG | + | chr1_3:52973002-52973021 | None:intergenic | 15.0% |
!! | CAGTAATAATAATTAGTTAT+AGG | - | chr1_3:52973141-52973160 | Msa0124990:intron | 15.0% |
!! | AAAGTTTATATAATGAATGT+AGG | - | chr1_3:52973840-52973859 | Msa0124990:intron | 15.0% |
!! | TGATAAAAAACAATTCAATA+TGG | + | chr1_3:52973910-52973929 | None:intergenic | 15.0% |
!!! | ATATTGAATTGTTTTTTATC+AGG | - | chr1_3:52973909-52973928 | Msa0124990:CDS | 15.0% |
!!! | TACAAAATATATTTTCATGT+TGG | - | chr1_3:52974564-52974583 | Msa0124990:intron | 15.0% |
!! | AATTAATGTAAAGAAAAGAT+TGG | + | chr1_3:52974721-52974740 | None:intergenic | 15.0% |
!!! | TAAACTTTAAAAGATTATGT+AGG | + | chr1_3:52974928-52974947 | None:intergenic | 15.0% |
!!! | CATTTGTATTAATTTTATGA+AGG | - | chr1_3:52975566-52975585 | Msa0124990:CDS | 15.0% |
!!! | TCAATTTGTTTTCAATATTT+AGG | + | chr1_3:52975638-52975657 | None:intergenic | 15.0% |
!!! | TTTTTTAATTAAATAAGCAC+GGG | + | chr1_3:52975801-52975820 | None:intergenic | 15.0% |
!! | TGAAAATATGAAGTTATTAT+TGG | + | chr1_3:52975965-52975984 | None:intergenic | 15.0% |
!!! | AATAATAACTTCATATTTTC+AGG | - | chr1_3:52975964-52975983 | Msa0124990:intron | 15.0% |
!! | AGTTAATAAAGTGATAATTT+GGG | + | chr1_3:52976147-52976166 | None:intergenic | 15.0% |
!!! | TGAATTTTTTTTGCAAAAAA+AGG | - | chr1_3:52976617-52976636 | Msa0124990:intron | 15.0% |
!! | ATAAAACTATTTAATAACCA+CGG | + | chr1_3:52977925-52977944 | None:intergenic | 15.0% |
!! | TTGAAATACCTATAAATTAA+TGG | - | chr1_3:52978435-52978454 | Msa0124990:intron | 15.0% |
!! | ACTTTAATCCATTAATTTAT+AGG | + | chr1_3:52978446-52978465 | None:intergenic | 15.0% |
!!! | TGATGGTTAATTTTAAACTT+TGG | - | chr1_3:52969443-52969462 | Msa0124990:three_prime_UTR | 20.0% |
!!! | TACTCTTTCTCTATATTTTT+CGG | + | chr1_3:52970226-52970245 | None:intergenic | 20.0% |
!!! | AAGAGCATAAGATAAAAAAT+GGG | + | chr1_3:52970563-52970582 | None:intergenic | 20.0% |
!!! | AAAGAGCATAAGATAAAAAA+TGG | + | chr1_3:52970564-52970583 | None:intergenic | 20.0% |
!! | TAAAACATATATACCTCTAA+AGG | + | chr1_3:52971315-52971334 | None:intergenic | 20.0% |
!!! | TTTTTACACACAAGAAAAAA+TGG | + | chr1_3:52971489-52971508 | None:intergenic | 20.0% |
!! | TAGCTTAGAATTTCAAAAAA+GGG | + | chr1_3:52971843-52971862 | None:intergenic | 20.0% |
!! | ATAGCTTAGAATTTCAAAAA+AGG | + | chr1_3:52971844-52971863 | None:intergenic | 20.0% |
!! | CCTAATTCATATAAAAGTAA+CGG | + | chr1_3:52972723-52972742 | None:intergenic | 20.0% |
!!! | TTACTTTTATTATCTCGAAT+TGG | - | chr1_3:52973338-52973357 | Msa0124990:CDS | 20.0% |
!!! | TACTTTTATTATCTCGAATT+GGG | - | chr1_3:52973339-52973358 | Msa0124990:CDS | 20.0% |
!! | AAAAACTAAATGTGTAACAT+TGG | + | chr1_3:52973654-52973673 | None:intergenic | 20.0% |
!! | AAGATGATGATAAAAGTTAA+AGG | + | chr1_3:52974043-52974062 | None:intergenic | 20.0% |
!!! | AATTTTCATAGAAACTAAGA+TGG | + | chr1_3:52974329-52974348 | None:intergenic | 20.0% |
!! | CTATGAAAATTTACATTTAC+TGG | - | chr1_3:52974338-52974357 | Msa0124990:CDS | 20.0% |
!! | ATAGATTGAAAAATAAAAGC+TGG | - | chr1_3:52974450-52974469 | Msa0124990:intron | 20.0% |
!! | TTTAAAAGATTATGTAGGAT+GGG | + | chr1_3:52974923-52974942 | None:intergenic | 20.0% |
!! | AAACATTTGTATTAGGTATT+TGG | - | chr1_3:52974956-52974975 | Msa0124990:CDS | 20.0% |
!! | TAAATACAAATGAATACAGA+GGG | + | chr1_3:52974986-52975005 | None:intergenic | 20.0% |
!!! | ACAGAATTTTATTATTAGAG+AGG | + | chr1_3:52975069-52975088 | None:intergenic | 20.0% |
!! | TTGAAAACAAATTGAACAAT+TGG | - | chr1_3:52975643-52975662 | Msa0124990:intron | 20.0% |
!! | GAGTTAATAAAGTGATAATT+TGG | + | chr1_3:52976148-52976167 | None:intergenic | 20.0% |
!! | TCAGCTATGAATTATTAAAA+TGG | + | chr1_3:52976181-52976200 | None:intergenic | 20.0% |
!! | ATGTTCAATTTCAATGTTAT+GGG | + | chr1_3:52976590-52976609 | None:intergenic | 20.0% |
!! | ATTTAAATTGAACTCAAGTT+TGG | + | chr1_3:52976688-52976707 | None:intergenic | 20.0% |
!! | TTATCTAGTATCTTATCTAT+AGG | - | chr1_3:52976707-52976726 | Msa0124990:intron | 20.0% |
!!! | ATTATTTTGTAGCATACAAT+TGG | - | chr1_3:52977380-52977399 | Msa0124990:CDS | 20.0% |
!!! | AAGTAAATTCAATTGATTCT+TGG | - | chr1_3:52978271-52978290 | Msa0124990:intron | 20.0% |
! | CAATCAAAAGCAAATCAATT+AGG | + | chr1_3:52969480-52969499 | None:intergenic | 25.0% |
!!! | CTTTTTTGTCGAATTTTTTC+TGG | - | chr1_3:52969643-52969662 | Msa0124990:three_prime_UTR | 25.0% |
! | CCTCAAAAAAAAAAAAGACT+GGG | + | chr1_3:52969687-52969706 | None:intergenic | 25.0% |
! | TCCTCAAAAAAAAAAAAGAC+TGG | + | chr1_3:52969688-52969707 | None:intergenic | 25.0% |
!!! | TTTTAGGGGAAAATAAAACT+AGG | + | chr1_3:52969721-52969740 | None:intergenic | 25.0% |
!!! | GATTTTCTATAGTTTTGCTA+TGG | + | chr1_3:52969783-52969802 | None:intergenic | 25.0% |
! | TAAATACAACGGAAAAAGTA+TGG | - | chr1_3:52970015-52970034 | Msa0124990:CDS | 25.0% |
!!! | TGACTTTATGTTATTTTCTC+AGG | - | chr1_3:52970638-52970657 | Msa0124990:CDS | 25.0% |
! | TGCAAATATTAGAATTGGAT+TGG | - | chr1_3:52970664-52970683 | Msa0124990:CDS | 25.0% |
!!! | TCTATGCAAGTTTTTTTGTT+GGG | - | chr1_3:52971035-52971054 | Msa0124990:intron | 25.0% |
!! | TCAATAGTTTTTGAATTTGC+AGG | + | chr1_3:52971067-52971086 | None:intergenic | 25.0% |
!!! | AAAACTATTGATTTTAGTCC+CGG | - | chr1_3:52971076-52971095 | Msa0124990:CDS | 25.0% |
!! | TAATTTTATTGGACCATGTA+TGG | - | chr1_3:52971125-52971144 | Msa0124990:intron | 25.0% |
! | ATTCTAAGCAAAAAAGCTTA+TGG | - | chr1_3:52971191-52971210 | Msa0124990:intron | 25.0% |
! | TTCTAAGCAAAAAAGCTTAT+GGG | - | chr1_3:52971192-52971211 | Msa0124990:intron | 25.0% |
! | ATAGCACGATAAAATAATGA+AGG | + | chr1_3:52971268-52971287 | None:intergenic | 25.0% |
!! | ATGCTACATTTTGCTAATAT+TGG | - | chr1_3:52971457-52971476 | Msa0124990:intron | 25.0% |
! | TAAGATCAAAATCTTCAACA+TGG | + | chr1_3:52971738-52971757 | None:intergenic | 25.0% |
!!! | ATGTATTTTTGTATGCTGTT+GGG | + | chr1_3:52971957-52971976 | None:intergenic | 25.0% |
!!! | TATGTATTTTTGTATGCTGT+TGG | + | chr1_3:52971958-52971977 | None:intergenic | 25.0% |
! | GAATCATAGTATTCATTGAA+GGG | + | chr1_3:52972074-52972093 | None:intergenic | 25.0% |
! | ATACTATGATTCCGTATATT+TGG | - | chr1_3:52972082-52972101 | Msa0124990:intron | 25.0% |
!! | GACAGTATTTTCCAAATATA+CGG | + | chr1_3:52972096-52972115 | None:intergenic | 25.0% |
! | GAAAATACTGTCAAATACTT+AGG | - | chr1_3:52972104-52972123 | Msa0124990:intron | 25.0% |
!!! | AAATACTTAGGTTGTGTTTT+TGG | - | chr1_3:52972116-52972135 | Msa0124990:intron | 25.0% |
! | ACCAAGTAACTAATATTAGA+CGG | - | chr1_3:52972443-52972462 | Msa0124990:intron | 25.0% |
!!! | TTACACTTTAAGTTGTTAGT+CGG | - | chr1_3:52972626-52972645 | Msa0124990:intron | 25.0% |
!!! | CCGTTACTTTTATATGAATT+AGG | - | chr1_3:52972720-52972739 | Msa0124990:intron | 25.0% |
!! | AAATTGAATACATTTGGGTT+AGG | + | chr1_3:52972996-52973015 | None:intergenic | 25.0% |
!!! | AGGATTTGTTGTCATTAATT+TGG | - | chr1_3:52973256-52973275 | Msa0124990:intron | 25.0% |
!!! | GGATTTGTTGTCATTAATTT+GGG | - | chr1_3:52973257-52973276 | Msa0124990:intron | 25.0% |
! | GTGTGAAATACAAATTCAAA+GGG | + | chr1_3:52973689-52973708 | None:intergenic | 25.0% |
! | AGTGTGAAATACAAATTCAA+AGG | + | chr1_3:52973690-52973709 | None:intergenic | 25.0% |
!!! | ATTTCCTTTATTTCTGTTTG+TGG | + | chr1_3:52973745-52973764 | None:intergenic | 25.0% |
!!! | TGAATGTAGGATTTCTTTTT+TGG | - | chr1_3:52973853-52973872 | Msa0124990:CDS | 25.0% |
!!! | TGAATTGTTTTTTATCAGGA+AGG | - | chr1_3:52973913-52973932 | Msa0124990:CDS | 25.0% |
! | TTTCAAAGGTTTAAGCTATT+AGG | + | chr1_3:52974133-52974152 | None:intergenic | 25.0% |
!! | TTTAGGGAAAACAACTTTTA+TGG | - | chr1_3:52974242-52974261 | Msa0124990:intron | 25.0% |
! | GAAACAGTTTCTATTTACTA+TGG | - | chr1_3:52974266-52974285 | Msa0124990:CDS | 25.0% |
! | CAAGCTAATTTATTTGAAGA+TGG | + | chr1_3:52974377-52974396 | None:intergenic | 25.0% |
!!! | AGTTTTAAGAGGAGAAATTT+TGG | + | chr1_3:52974893-52974912 | None:intergenic | 25.0% |
!! | CTTTAAAAGATTATGTAGGA+TGG | + | chr1_3:52974924-52974943 | None:intergenic | 25.0% |
! | CAAACACAAACATTTGTATT+AGG | - | chr1_3:52974949-52974968 | Msa0124990:CDS | 25.0% |
! | GTAAATACAAATGAATACAG+AGG | + | chr1_3:52974987-52975006 | None:intergenic | 25.0% |
!! | GAATTTTATTATTAGAGAGG+CGG | + | chr1_3:52975066-52975085 | None:intergenic | 25.0% |
! | AAACACAAAATCTCATTAAG+CGG | + | chr1_3:52975205-52975224 | None:intergenic | 25.0% |
! | ACAGTATAAAATTAGGCATT+TGG | + | chr1_3:52975242-52975261 | None:intergenic | 25.0% |
! | AGCTGATACAGTATAAAATT+AGG | + | chr1_3:52975249-52975268 | None:intergenic | 25.0% |
! | TGGATTTAGTAAAAGTAAAG+AGG | + | chr1_3:52975366-52975385 | None:intergenic | 25.0% |
!! | ACTTTTACTAAATCCATCAT+AGG | - | chr1_3:52975370-52975389 | Msa0124990:intron | 25.0% |
! | TGAGAAGTTGAAAGAATTTA+TGG | - | chr1_3:52975674-52975693 | Msa0124990:intron | 25.0% |
! | GAGAAGTTGAAAGAATTTAT+GGG | - | chr1_3:52975675-52975694 | Msa0124990:intron | 25.0% |
! | AGAAGTTGAAAGAATTTATG+GGG | - | chr1_3:52975676-52975695 | Msa0124990:intron | 25.0% |
!!! | TTCTGAATATTTTTAACTGG+TGG | + | chr1_3:52975764-52975783 | None:intergenic | 25.0% |
!!! | GTGTTCTGAATATTTTTAAC+TGG | + | chr1_3:52975767-52975786 | None:intergenic | 25.0% |
! | TTGTATGTGTATTTATGCAA+TGG | - | chr1_3:52975886-52975905 | Msa0124990:intron | 25.0% |
!!! | CATATTTTCAGGATATATCA+AGG | - | chr1_3:52975975-52975994 | Msa0124990:intron | 25.0% |
! | TTTAACATTAACAGATCGAT+TGG | + | chr1_3:52976067-52976086 | None:intergenic | 25.0% |
! | TGCATTTACATTAATGTCAA+TGG | - | chr1_3:52976410-52976429 | Msa0124990:intron | 25.0% |
! | ATTTACATTAATGTCAATGG+CGG | - | chr1_3:52976413-52976432 | Msa0124990:intron | 25.0% |
!!! | ATTTTCTAAAGACTACAATG+TGG | + | chr1_3:52976543-52976562 | None:intergenic | 25.0% |
! | CATGTTCAATTTCAATGTTA+TGG | + | chr1_3:52976591-52976610 | None:intergenic | 25.0% |
! | ACTTTCTATCACAATGTTAA+TGG | - | chr1_3:52977150-52977169 | Msa0124990:CDS | 25.0% |
!! | CCAAGATTTTCTTCTTTTTT+CGG | + | chr1_3:52977219-52977238 | None:intergenic | 25.0% |
! | CTTGAACTCTATGTATAAAA+TGG | + | chr1_3:52977305-52977324 | None:intergenic | 25.0% |
!!! | ACAAAATCATTGATAATGCT+AGG | + | chr1_3:52977577-52977596 | None:intergenic | 25.0% |
!!! | ACTTTTTCAAGTTTAACTGA+TGG | - | chr1_3:52977602-52977621 | Msa0124990:intron | 25.0% |
! | CTATTAGGTTATACAATCAA+GGG | - | chr1_3:52977818-52977837 | Msa0124990:intron | 25.0% |
! | ATAGATTACTGCTAATTTCA+TGG | - | chr1_3:52978168-52978187 | Msa0124990:intron | 25.0% |
!!! | ATTTCATGGATTCAAGTTTT+TGG | - | chr1_3:52978182-52978201 | Msa0124990:intron | 25.0% |
! | TCAAAATAACTGAAAACACA+AGG | - | chr1_3:52978337-52978356 | Msa0124990:intron | 25.0% |
! | GTATTACATGAATTGAATTC+TGG | - | chr1_3:52978388-52978407 | Msa0124990:intron | 25.0% |
TCAGGGTAATTAAAGTTTGA+TGG | - | chr1_3:52969426-52969445 | Msa0124990:three_prime_UTR | 30.0% | |
!!! | CCCAGTCTTTTTTTTTTTTG+AGG | - | chr1_3:52969684-52969703 | Msa0124990:three_prime_UTR | 30.0% |
!! | TATAGTTTTGCTATGGATGT+AGG | + | chr1_3:52969776-52969795 | None:intergenic | 30.0% |
! | GTCGTCTATCTGAAATTAAA+CGG | + | chr1_3:52970150-52970169 | None:intergenic | 30.0% |
TTGCAAACTCTAATTTCCAA+TGG | - | chr1_3:52970363-52970382 | Msa0124990:CDS | 30.0% | |
!!! | TGGATTTTTTTTGCATACCT+GGG | + | chr1_3:52970527-52970546 | None:intergenic | 30.0% |
!!! | TTGGATTTTTTTTGCATACC+TGG | + | chr1_3:52970528-52970547 | None:intergenic | 30.0% |
GGTTCTGCAAATATTAGAAT+TGG | - | chr1_3:52970659-52970678 | Msa0124990:CDS | 30.0% | |
TGCAATGAGGGATATTATAA+GGG | + | chr1_3:52970703-52970722 | None:intergenic | 30.0% | |
ATGCAATGAGGGATATTATA+AGG | + | chr1_3:52970704-52970723 | None:intergenic | 30.0% | |
TATAATGAGCAATGCAATGA+GGG | + | chr1_3:52970715-52970734 | None:intergenic | 30.0% | |
! | ATTCTTCTTAGGAACTTGTT+TGG | + | chr1_3:52970738-52970757 | None:intergenic | 30.0% |
TGATCTTGAACATTCTTCTT+AGG | + | chr1_3:52970749-52970768 | None:intergenic | 30.0% | |
TAAGAAGAATGTTCAAGATC+AGG | - | chr1_3:52970748-52970767 | Msa0124990:CDS | 30.0% | |
! | TCCTGCAATTATAGTGTTTT+TGG | - | chr1_3:52970821-52970840 | Msa0124990:intron | 30.0% |
ACCAAAAACACTATAATTGC+AGG | + | chr1_3:52970825-52970844 | None:intergenic | 30.0% | |
!! | AATTCTAAAACCTGATCTCA+GGG | + | chr1_3:52970854-52970873 | None:intergenic | 30.0% |
!! | TAATTCTAAAACCTGATCTC+AGG | + | chr1_3:52970855-52970874 | None:intergenic | 30.0% |
! | TCCTGCAATTATAGTGTTTT+TGG | - | chr1_3:52970821-52970840 | Msa0124990:intron | 30.0% |
ACCAAAAACACTATAATTGC+AGG | + | chr1_3:52970825-52970844 | None:intergenic | 30.0% | |
! | TCCTGCAATTATAGTGTTTT+TGG | - | chr1_3:52970821-52970840 | Msa0124990:intron | 30.0% |
ACCAAAAACACTATAATTGC+AGG | + | chr1_3:52970825-52970844 | None:intergenic | 30.0% | |
!!! | GTCTATGCAAGTTTTTTTGT+TGG | - | chr1_3:52971034-52971053 | Msa0124990:intron | 30.0% |
!!! | AAACTATTGATTTTAGTCCC+GGG | - | chr1_3:52971077-52971096 | Msa0124990:CDS | 30.0% |
TCTAAGCAAAAAAGCTTATG+GGG | - | chr1_3:52971193-52971212 | Msa0124990:intron | 30.0% | |
AGAAATCATATACCTTACGA+GGG | + | chr1_3:52971570-52971589 | None:intergenic | 30.0% | |
AAGAAATCATATACCTTACG+AGG | + | chr1_3:52971571-52971590 | None:intergenic | 30.0% | |
CATGAAATCAAACAAAACTG+AGG | + | chr1_3:52971617-52971636 | None:intergenic | 30.0% | |
TTGGGAATGCATTTCAAATA+GGG | - | chr1_3:52971694-52971713 | Msa0124990:intron | 30.0% | |
AAGGGTCAATCAAATTACAA+CGG | + | chr1_3:52971825-52971844 | None:intergenic | 30.0% | |
! | CTAAGCTATGTTGTTTATCT+CGG | - | chr1_3:52971855-52971874 | Msa0124990:CDS | 30.0% |
TATCTGCTATATCACTTTAG+CGG | + | chr1_3:52971910-52971929 | None:intergenic | 30.0% | |
TAAAGTGATATAGCAGATAG+CGG | - | chr1_3:52971911-52971930 | Msa0124990:intron | 30.0% | |
CTGTTGGGATTTATATTTAG+TGG | + | chr1_3:52971942-52971961 | None:intergenic | 30.0% | |
GGAATCATAGTATTCATTGA+AGG | + | chr1_3:52972075-52972094 | None:intergenic | 30.0% | |
ATTGTACTAAATGCACAGAT+GGG | - | chr1_3:52972197-52972216 | Msa0124990:intron | 30.0% | |
TAAACATTAGTCCAAGTGAA+GGG | + | chr1_3:52972260-52972279 | None:intergenic | 30.0% | |
! | ATGTCAACTAGTTTAGCATT+TGG | - | chr1_3:52972401-52972420 | Msa0124990:intron | 30.0% |
ACCGTCTAATATTAGTTACT+TGG | + | chr1_3:52972447-52972466 | None:intergenic | 30.0% | |
ACTAATATTAGACGGTAATC+AGG | - | chr1_3:52972451-52972470 | Msa0124990:intron | 30.0% | |
! | TCAAATCTGTACCTTCTTTT+GGG | + | chr1_3:52972814-52972833 | None:intergenic | 30.0% |
! | TTCAAATCTGTACCTTCTTT+TGG | + | chr1_3:52972815-52972834 | None:intergenic | 30.0% |
! | AAAAGAAGGTACAGATTTGA+AGG | - | chr1_3:52972814-52972833 | Msa0124990:intron | 30.0% |
AAGTTCAGAAAGTTCATTTG+TGG | - | chr1_3:52972857-52972876 | Msa0124990:intron | 30.0% | |
ATAAACAATATGGTTCAGTG+GGG | + | chr1_3:52972904-52972923 | None:intergenic | 30.0% | |
CATAAACAATATGGTTCAGT+GGG | + | chr1_3:52972905-52972924 | None:intergenic | 30.0% | |
ACATAAACAATATGGTTCAG+TGG | + | chr1_3:52972906-52972925 | None:intergenic | 30.0% | |
ATTGGACGACATAAACAATA+TGG | + | chr1_3:52972914-52972933 | None:intergenic | 30.0% | |
AAATATTCAAATGTCCTCTG+CGG | + | chr1_3:52972937-52972956 | None:intergenic | 30.0% | |
AATGCAACAGCTAACTTATA+AGG | + | chr1_3:52973076-52973095 | None:intergenic | 30.0% | |
! | AGATATGCTAGTGTTTGTTT+TGG | - | chr1_3:52973226-52973245 | Msa0124990:intron | 30.0% |
!!! | GTGTTTGTTTTGGTGATTTA+AGG | - | chr1_3:52973236-52973255 | Msa0124990:intron | 30.0% |
! | GTCATTAATTTGGGAGTTTA+TGG | - | chr1_3:52973266-52973285 | Msa0124990:intron | 30.0% |
!! | ATATTGGTTCCCAAATTGAA+TGG | - | chr1_3:52973310-52973329 | Msa0124990:CDS | 30.0% |
TGAAAGCAAGAAATAATCAG+AGG | + | chr1_3:52973452-52973471 | None:intergenic | 30.0% | |
!!! | ACACATTTAGTTTTTCCTGT+TGG | - | chr1_3:52973659-52973678 | Msa0124990:intron | 30.0% |
GAATTTGTATTTCACACTTC+TGG | - | chr1_3:52973692-52973711 | Msa0124990:intron | 30.0% | |
! | AACTTTTAGCAGCAAATAGA+AGG | + | chr1_3:52973826-52973845 | None:intergenic | 30.0% |
!!! | TGTAGGATTTCTTTTTTGGT+AGG | - | chr1_3:52973857-52973876 | Msa0124990:CDS | 30.0% |
GACATCAATTATATGCATAG+AGG | - | chr1_3:52973999-52974018 | Msa0124990:intron | 30.0% | |
CATCTTGTATTGTTCATTTC+TGG | - | chr1_3:52974077-52974096 | Msa0124990:CDS | 30.0% | |
AATCAAGACTCATAACAACT+TGG | + | chr1_3:52974193-52974212 | None:intergenic | 30.0% | |
!! | TCTTGATTCTTGATAGTGAT+TGG | - | chr1_3:52974205-52974224 | Msa0124990:intron | 30.0% |
!! | CTTGATTCTTGATAGTGATT+GGG | - | chr1_3:52974206-52974225 | Msa0124990:intron | 30.0% |
!! | AAAAGTTGTTTTCCCTAAAG+TGG | + | chr1_3:52974241-52974260 | None:intergenic | 30.0% |
GCTAATTTATTTGAAGATGG+TGG | + | chr1_3:52974374-52974393 | None:intergenic | 30.0% | |
CAAATCTGATAGATAATTCG+AGG | + | chr1_3:52974402-52974421 | None:intergenic | 30.0% | |
! | ACTGCAAAAACTCTAACTTT+TGG | - | chr1_3:52974533-52974552 | Msa0124990:intron | 30.0% |
!!! | GAGACAATTTCATTGGTTTT+TGG | + | chr1_3:52974788-52974807 | None:intergenic | 30.0% |
AAGAGAAGAGACAATTTCAT+TGG | + | chr1_3:52974795-52974814 | None:intergenic | 30.0% | |
AGTTTATTGAGATGAAGTGA+AGG | - | chr1_3:52974824-52974843 | Msa0124990:intron | 30.0% | |
TTGTATTTACTGTGTGTGTT+TGG | - | chr1_3:52974997-52975016 | Msa0124990:CDS | 30.0% | |
TGTATTTACTGTGTGTGTTT+GGG | - | chr1_3:52974998-52975017 | Msa0124990:CDS | 30.0% | |
CAGATTCATTCAATTTCTCT+TGG | - | chr1_3:52975129-52975148 | Msa0124990:intron | 30.0% | |
GAACATAACAGTCATCTTTA+AGG | + | chr1_3:52975290-52975309 | None:intergenic | 30.0% | |
! | GTAAAGAGGCTAAACTTTTA+TGG | + | chr1_3:52975352-52975371 | None:intergenic | 30.0% |
TCAGCACATTAGATACAAAA+TGG | + | chr1_3:52975855-52975874 | None:intergenic | 30.0% | |
ACTACGACAAACACAAAATT+TGG | + | chr1_3:52975928-52975947 | None:intergenic | 30.0% | |
AACATATCTGTTCGAATTTG+TGG | + | chr1_3:52976037-52976056 | None:intergenic | 30.0% | |
AAAAACGAGATAACAGCTTT+AGG | + | chr1_3:52976322-52976341 | None:intergenic | 30.0% | |
! | TTTTTCACTCATTTCTCTCT+CGG | - | chr1_3:52976358-52976377 | Msa0124990:intron | 30.0% |
ACTATGGCATGTTTATATAG+GGG | + | chr1_3:52976451-52976470 | None:intergenic | 30.0% | |
CACTATGGCATGTTTATATA+GGG | + | chr1_3:52976452-52976471 | None:intergenic | 30.0% | |
TCTAGTATCTTATCTATAGG+AGG | - | chr1_3:52976710-52976729 | Msa0124990:intron | 30.0% | |
CTAGTATCTTATCTATAGGA+GGG | - | chr1_3:52976711-52976730 | Msa0124990:intron | 30.0% | |
TAGTATCTTATCTATAGGAG+GGG | - | chr1_3:52976712-52976731 | Msa0124990:intron | 30.0% | |
TATCTACTGGCAAAATTTGA+GGG | + | chr1_3:52976856-52976875 | None:intergenic | 30.0% | |
TTATCTACTGGCAAAATTTG+AGG | + | chr1_3:52976857-52976876 | None:intergenic | 30.0% | |
AATGACAAACACTATTGCAT+AGG | - | chr1_3:52976889-52976908 | Msa0124990:intron | 30.0% | |
TGCAAAATTGTTCACAAACA+TGG | + | chr1_3:52977026-52977045 | None:intergenic | 30.0% | |
! | AACATTGTGATAGAAAGTGT+CGG | + | chr1_3:52977148-52977167 | None:intergenic | 30.0% |
TTCTATCACAATGTTAATGG+AGG | - | chr1_3:52977153-52977172 | Msa0124990:CDS | 30.0% | |
TCTATCACAATGTTAATGGA+GGG | - | chr1_3:52977154-52977173 | Msa0124990:CDS | 30.0% | |
CCGAAAAAAGAAGAAAATCT+TGG | - | chr1_3:52977216-52977235 | Msa0124990:intron | 30.0% | |
GAACTCTATGTATAAAATGG+AGG | + | chr1_3:52977302-52977321 | None:intergenic | 30.0% | |
!! | TCTTTGGTGATTATTTTCAC+AGG | - | chr1_3:52977336-52977355 | Msa0124990:intron | 30.0% |
! | AGAAAGTGACACATTTTATC+TGG | - | chr1_3:52977461-52977480 | Msa0124990:intron | 30.0% |
!! | ACATTTTATCTGGAATAGAC+TGG | - | chr1_3:52977471-52977490 | Msa0124990:intron | 30.0% |
! | AGGTTTGTTTCAATTTCCAT+TGG | - | chr1_3:52977537-52977556 | Msa0124990:intron | 30.0% |
ACTGTATCAATTGCTTCATT+TGG | + | chr1_3:52977674-52977693 | None:intergenic | 30.0% | |
AAATGAAGCAATTGATACAG+TGG | - | chr1_3:52977673-52977692 | Msa0124990:intron | 30.0% | |
!! | TGTTTCTTCTCTTTGCTATT+AGG | - | chr1_3:52977803-52977822 | Msa0124990:intron | 30.0% |
GCTATTAGGTTATACAATCA+AGG | - | chr1_3:52977817-52977836 | Msa0124990:intron | 30.0% | |
AGAATCTGCAAAAACATTAC+AGG | + | chr1_3:52977981-52978000 | None:intergenic | 30.0% | |
!! | GTAATGTTTTTGCAGATTCT+TGG | - | chr1_3:52977981-52978000 | Msa0124990:intron | 30.0% |
TGGAAGTAACAGAAAATACA+AGG | - | chr1_3:52978070-52978089 | Msa0124990:intron | 30.0% | |
TGTGTTACATGAATTCTTGA+AGG | - | chr1_3:52978120-52978139 | Msa0124990:intron | 30.0% | |
!! | GAAACTTTAAGATGTATGAC+AGG | + | chr1_3:52978146-52978165 | None:intergenic | 30.0% |
! | ATTCTTGGAGTACTTGATTT+AGG | - | chr1_3:52978286-52978305 | Msa0124990:intron | 30.0% |
TACATGAATTGAATTCTGGA+AGG | - | chr1_3:52978392-52978411 | Msa0124990:intron | 30.0% | |
!! | TTCTAAAGTTTCGACGTTCA+GGG | - | chr1_3:52969409-52969428 | Msa0124990:three_prime_UTR | 35.0% |
! | ACAACGGAAAAAGTATGGAA+TGG | - | chr1_3:52970020-52970039 | Msa0124990:CDS | 35.0% |
!! | TTCTCTATATTTTTCGGACC+AGG | + | chr1_3:52970220-52970239 | None:intergenic | 35.0% |
TTGCTAAGAACAAGAACAAG+AGG | - | chr1_3:52970325-52970344 | Msa0124990:intron | 35.0% | |
!! | AAGATGAGAGAAAGTACCAT+TGG | + | chr1_3:52970382-52970401 | None:intergenic | 35.0% |
AAATGGGTAATGCGCAAAAT+TGG | + | chr1_3:52970547-52970566 | None:intergenic | 35.0% | |
GCAATGAGGGATATTATAAG+GGG | + | chr1_3:52970702-52970721 | None:intergenic | 35.0% | |
GTATAATGAGCAATGCAATG+AGG | + | chr1_3:52970716-52970735 | None:intergenic | 35.0% | |
AATTCAAAAACCTGGTCTCA+GGG | + | chr1_3:52970947-52970966 | None:intergenic | 35.0% | |
TAATTCAAAAACCTGGTCTC+AGG | + | chr1_3:52970948-52970967 | None:intergenic | 35.0% | |
!! | TCTTTGGAACTGTTTAAGCT+TGG | - | chr1_3:52971675-52971694 | Msa0124990:intron | 35.0% |
!! | CTTTGGAACTGTTTAAGCTT+GGG | - | chr1_3:52971676-52971695 | Msa0124990:intron | 35.0% |
CTTGGGAATGCATTTCAAAT+AGG | - | chr1_3:52971693-52971712 | Msa0124990:intron | 35.0% | |
TGACAGACACATATCATTTG+TGG | - | chr1_3:52971791-52971810 | Msa0124990:CDS | 35.0% | |
TATATCACTTTAGCGGTTTC+AGG | + | chr1_3:52971903-52971922 | None:intergenic | 35.0% | |
AAAGTGATATAGCAGATAGC+GGG | - | chr1_3:52971912-52971931 | Msa0124990:intron | 35.0% | |
CATCTGTGCATTTAGTACAA+TGG | + | chr1_3:52972198-52972217 | None:intergenic | 35.0% | |
CATTGTACTAAATGCACAGA+TGG | - | chr1_3:52972196-52972215 | Msa0124990:intron | 35.0% | |
TTGTACTAAATGCACAGATG+GGG | - | chr1_3:52972198-52972217 | Msa0124990:intron | 35.0% | |
GTAAACATTAGTCCAAGTGA+AGG | + | chr1_3:52972261-52972280 | None:intergenic | 35.0% | |
CAGCATTAGGTAAGAGTAAA+TGG | - | chr1_3:52972309-52972328 | Msa0124990:intron | 35.0% | |
GGTACAGATTTGAAGGAAAT+TGG | - | chr1_3:52972821-52972840 | Msa0124990:intron | 35.0% | |
TAAACAATATGGTTCAGTGG+GGG | + | chr1_3:52972903-52972922 | None:intergenic | 35.0% | |
ATTTGGGAACCAATATCCAA+TGG | + | chr1_3:52973306-52973325 | None:intergenic | 35.0% | |
GTAAAGTCGCCATTCAATTT+GGG | + | chr1_3:52973322-52973341 | None:intergenic | 35.0% | |
AGTAAAGTCGCCATTCAATT+TGG | + | chr1_3:52973323-52973342 | None:intergenic | 35.0% | |
ACAACAGACTCTAGATTACT+GGG | + | chr1_3:52973396-52973415 | None:intergenic | 35.0% | |
CATTCTACATCACTATTGCT+TGG | - | chr1_3:52973470-52973489 | Msa0124990:intron | 35.0% | |
TTGAGGATCTACGTTCTATT+TGG | - | chr1_3:52973508-52973527 | Msa0124990:intron | 35.0% | |
TGAGGATCTACGTTCTATTT+GGG | - | chr1_3:52973509-52973528 | Msa0124990:intron | 35.0% | |
TACATGTTTCTTTCATTGCG+AGG | + | chr1_3:52973564-52973583 | None:intergenic | 35.0% | |
CCACGATTATCAAATGTTTC+TGG | + | chr1_3:52973606-52973625 | None:intergenic | 35.0% | |
! | CCAGAAACATTTGATAATCG+TGG | - | chr1_3:52973603-52973622 | Msa0124990:intron | 35.0% |
!! | ATGTGTAACATTGGCTTTGA+AGG | + | chr1_3:52973645-52973664 | None:intergenic | 35.0% |
!! | CTTTATTTCTGTTTGTGGCA+TGG | + | chr1_3:52973740-52973759 | None:intergenic | 35.0% |
CATGCCACAAACAGAAATAA+AGG | - | chr1_3:52973738-52973757 | Msa0124990:intron | 35.0% | |
GGAAATTCTATCTGTAGTAC+TGG | - | chr1_3:52973759-52973778 | Msa0124990:intron | 35.0% | |
ACAGCTTGTGTAGTGAATAT+TGG | - | chr1_3:52973967-52973986 | Msa0124990:intron | 35.0% | |
GTCAGTAGCAACTATTTCAA+AGG | + | chr1_3:52974147-52974166 | None:intergenic | 35.0% | |
TGAAATAGTTGCTACTGACA+TGG | - | chr1_3:52974148-52974167 | Msa0124990:intron | 35.0% | |
ATAAAAGCTGGCCAAGTATT+TGG | - | chr1_3:52974462-52974481 | Msa0124990:intron | 35.0% | |
GCAGTTAACTACCAAATACT+TGG | + | chr1_3:52974476-52974495 | None:intergenic | 35.0% | |
!!! | AACTGCTTCTTTTGCTGTTT+AGG | - | chr1_3:52974490-52974509 | Msa0124990:intron | 35.0% |
! | GTTAGAGTTTTTGCAGTTGA+AGG | + | chr1_3:52974530-52974549 | None:intergenic | 35.0% |
! | GCAAAAACTCTAACTTTTGG+CGG | - | chr1_3:52974536-52974555 | Msa0124990:intron | 35.0% |
TTTCATGTTGGACAAGTTAC+TGG | - | chr1_3:52974576-52974595 | Msa0124990:intron | 35.0% | |
AACCTGAAGAATCTGAACTT+AGG | - | chr1_3:52975174-52975193 | Msa0124990:intron | 35.0% | |
ACCTGAAGAATCTGAACTTA+GGG | - | chr1_3:52975175-52975194 | Msa0124990:intron | 35.0% | |
! | CATAACAGTCATCTTTAAGG+AGG | + | chr1_3:52975287-52975306 | None:intergenic | 35.0% |
TTTATGGCAAAGTGCAATCT+AGG | + | chr1_3:52975336-52975355 | None:intergenic | 35.0% | |
! | AATACAGTGTTCAGCCTTTT+TGG | + | chr1_3:52975443-52975462 | None:intergenic | 35.0% |
GCTGAACACTGTATTTCATA+AGG | - | chr1_3:52975448-52975467 | Msa0124990:intron | 35.0% | |
!! | GGAGTTTTGTAAGTTGTAAG+TGG | + | chr1_3:52975743-52975762 | None:intergenic | 35.0% |
GATGTCTTTGTGTATAGAGA+AGG | + | chr1_3:52976003-52976022 | None:intergenic | 35.0% | |
CGGCTTCATTATCTCTTAAT+TGG | - | chr1_3:52976378-52976397 | Msa0124990:intron | 35.0% | |
CCACTATGGCATGTTTATAT+AGG | + | chr1_3:52976453-52976472 | None:intergenic | 35.0% | |
CCTATATAAACATGCCATAG+TGG | - | chr1_3:52976450-52976469 | Msa0124990:CDS | 35.0% | |
ATCGAAACAGCATTATCTAC+TGG | + | chr1_3:52976869-52976888 | None:intergenic | 35.0% | |
ACATCAGGAACAAAAAACGT+TGG | + | chr1_3:52976938-52976957 | None:intergenic | 35.0% | |
! | ATTTTGCATTTACACAACCC+TGG | - | chr1_3:52977038-52977057 | Msa0124990:intron | 35.0% |
ATGGTCATTAAACCTAGCAA+GGG | + | chr1_3:52977070-52977089 | None:intergenic | 35.0% | |
TATCTTCTAGCATATCCTCA+TGG | + | chr1_3:52977089-52977108 | None:intergenic | 35.0% | |
AGGATATGCTAGAAGATACA+TGG | - | chr1_3:52977091-52977110 | Msa0124990:intron | 35.0% | |
AATCACCAAAGAGCTAAACA+AGG | + | chr1_3:52977328-52977347 | None:intergenic | 35.0% | |
!! | TTTTATCTGGAATAGACTGG+CGG | - | chr1_3:52977474-52977493 | Msa0124990:intron | 35.0% |
GTATCAATTGCTTCATTTGG+AGG | + | chr1_3:52977671-52977690 | None:intergenic | 35.0% | |
ACTAGAGCAATTGCTTCATT+TGG | + | chr1_3:52977707-52977726 | None:intergenic | 35.0% | |
CAAATCCAACATTTGTGTCA+TGG | - | chr1_3:52977841-52977860 | Msa0124990:intron | 35.0% | |
CTTCATTAATTTCTTCTCCG+TGG | - | chr1_3:52977905-52977924 | Msa0124990:intron | 35.0% | |
! | ATTCTTGGAGTACTTGATGT+AGG | - | chr1_3:52977996-52978015 | Msa0124990:intron | 35.0% |
! | TTGGAGTACTTGATTTAGGT+AGG | - | chr1_3:52978290-52978309 | Msa0124990:intron | 35.0% |
! | TGGAGTACTTGATTTAGGTA+GGG | - | chr1_3:52978291-52978310 | Msa0124990:intron | 35.0% |
GTAGGGATGCATGAATAAAT+TGG | - | chr1_3:52978308-52978327 | Msa0124990:intron | 35.0% | |
GGATGCATGAATAAATTGGT+AGG | - | chr1_3:52978312-52978331 | Msa0124990:intron | 35.0% | |
!! | CTTCTAAAGTTTCGACGTTC+AGG | - | chr1_3:52969408-52969427 | Msa0124990:three_prime_UTR | 40.0% |
GATTTCCTGCTGTTACAGTA+GGG | - | chr1_3:52970042-52970061 | Msa0124990:intron | 40.0% | |
CTCGATCGTACAGTTATGAT+CGG | + | chr1_3:52970090-52970109 | None:intergenic | 40.0% | |
TTTGCTACAGCATCAAAACC+TGG | - | chr1_3:52970199-52970218 | Msa0124990:CDS | 40.0% | |
TCTCATGTGTTCTATGTCAC+AGG | - | chr1_3:52970434-52970453 | Msa0124990:intron | 40.0% | |
! | CGTTCTGACATAACTTGTGA+AGG | + | chr1_3:52970480-52970499 | None:intergenic | 40.0% |
TCACAAGTTATGTCAGAACG+TGG | - | chr1_3:52970480-52970499 | Msa0124990:CDS | 40.0% | |
!! | TGGGTTGATTACAACGAGAT+TGG | + | chr1_3:52970508-52970527 | None:intergenic | 40.0% |
AATCTCGTTGTAATCAACCC+AGG | - | chr1_3:52970507-52970526 | Msa0124990:intron | 40.0% | |
TCCAATAAAATTACGCCCCA+TGG | + | chr1_3:52971118-52971137 | None:intergenic | 40.0% | |
!! | GTTGTTTTCGCTTCCTTTAG+AGG | - | chr1_3:52971299-52971318 | Msa0124990:intron | 40.0% |
AGTTACAACTGCACAGCATA+TGG | - | chr1_3:52971377-52971396 | Msa0124990:intron | 40.0% | |
AACTGCACAGCATATGGAAA+GGG | - | chr1_3:52971383-52971402 | Msa0124990:intron | 40.0% | |
ACAGCATATGGAAAGGGAAA+AGG | - | chr1_3:52971389-52971408 | Msa0124990:intron | 40.0% | |
ACTGTTGAAGATACCGTTTC+TGG | - | chr1_3:52971519-52971538 | Msa0124990:intron | 40.0% | |
GAAGGTTCTTCATCCAGAAA+CGG | + | chr1_3:52971535-52971554 | None:intergenic | 40.0% | |
GTTGGAACTTCTTCGTTCTT+TGG | - | chr1_3:52971659-52971678 | Msa0124990:intron | 40.0% | |
CAGACACATATCATTTGTGG+AGG | - | chr1_3:52971794-52971813 | Msa0124990:CDS | 40.0% | |
!! | ACTTTAGCGGTTTCAGGTTT+GGG | + | chr1_3:52971897-52971916 | None:intergenic | 40.0% |
CACTTGGACTAATGTTTACG+AGG | - | chr1_3:52972262-52972281 | Msa0124990:intron | 40.0% | |
TTGGACTAATGTTTACGAGG+AGG | - | chr1_3:52972265-52972284 | Msa0124990:intron | 40.0% | |
TCGTCTTCAGTTTCAGCATT+AGG | - | chr1_3:52972296-52972315 | Msa0124990:intron | 40.0% | |
TCACATGGAAGTTTGCATGT+AGG | - | chr1_3:52972496-52972515 | Msa0124990:intron | 40.0% | |
AGTTTGCATGTAGGTATCTC+AGG | - | chr1_3:52972505-52972524 | Msa0124990:intron | 40.0% | |
! | CCATGTTCTAAGTTCAAGAC+AGG | + | chr1_3:52972566-52972585 | None:intergenic | 40.0% |
CCTGTCTTGAACTTAGAACA+TGG | - | chr1_3:52972563-52972582 | Msa0124990:intron | 40.0% | |
AGATGAGACTAGTGAGTCTT+TGG | - | chr1_3:52972787-52972806 | Msa0124990:intron | 40.0% | |
TTGCTTGAGCCATTGGATAT+TGG | - | chr1_3:52973294-52973313 | Msa0124990:intron | 40.0% | |
CACAACAGACTCTAGATTAC+TGG | + | chr1_3:52973397-52973416 | None:intergenic | 40.0% | |
!! | CTATTGCTTGGCTATTTTGC+AGG | - | chr1_3:52973482-52973501 | Msa0124990:intron | 40.0% |
! | ATCTACGTTCTATTTGGGAC+TGG | - | chr1_3:52973514-52973533 | Msa0124990:intron | 40.0% |
AATTCAAAGGGAACTCCAAC+AGG | + | chr1_3:52973677-52973696 | None:intergenic | 40.0% | |
! | TGTAGTGAATATTGGTGCTC+AGG | - | chr1_3:52973975-52973994 | Msa0124990:intron | 40.0% |
! | ATTAGGTGAAAGCACATGCA+TGG | + | chr1_3:52974116-52974135 | None:intergenic | 40.0% |
ATAGTTGCTACTGACATGGT+AGG | - | chr1_3:52974152-52974171 | Msa0124990:intron | 40.0% | |
!! | TGGGTTTACTTTGCCACTTT+AGG | - | chr1_3:52974225-52974244 | Msa0124990:intron | 40.0% |
!! | GGGTTTACTTTGCCACTTTA+GGG | - | chr1_3:52974226-52974245 | Msa0124990:intron | 40.0% |
!!! | GCTTCTTTTGCTGTTTAGGA+AGG | - | chr1_3:52974494-52974513 | Msa0124990:intron | 40.0% |
!!! | TGGGAGATACGAGTTTTAAG+AGG | + | chr1_3:52974904-52974923 | None:intergenic | 40.0% |
CATCTATTCAGCCCATCTAA+GGG | - | chr1_3:52975029-52975048 | Msa0124990:CDS | 40.0% | |
ATCTATTCAGCCCATCTAAG+GGG | - | chr1_3:52975030-52975049 | Msa0124990:CDS | 40.0% | |
TCCCTAAGTTCAGATTCTTC+AGG | + | chr1_3:52975179-52975198 | None:intergenic | 40.0% | |
! | AGTCAGCAAAAGTTGATCCA+AGG | - | chr1_3:52975394-52975413 | Msa0124990:intron | 40.0% |
GTGAATGTTGGGAGTAAGAT+TGG | + | chr1_3:52975421-52975440 | None:intergenic | 40.0% | |
ACTCCCAACATTCACCAAAA+AGG | - | chr1_3:52975426-52975445 | Msa0124990:intron | 40.0% | |
!! | CAGCCTTTTTGGTGAATGTT+GGG | + | chr1_3:52975432-52975451 | None:intergenic | 40.0% |
!! | TCAGCCTTTTTGGTGAATGT+TGG | + | chr1_3:52975433-52975452 | None:intergenic | 40.0% |
! | ATCGACAAAGTATCAAGGCT+TGG | + | chr1_3:52975717-52975736 | None:intergenic | 40.0% |
AAATAAGCACGGGATTGAGA+AGG | + | chr1_3:52975791-52975810 | None:intergenic | 40.0% | |
TAGCTGAGAGAAAACAGAGT+TGG | - | chr1_3:52976194-52976213 | Msa0124990:intron | 40.0% | |
AGCTGAGAGAAAACAGAGTT+GGG | - | chr1_3:52976195-52976214 | Msa0124990:intron | 40.0% | |
! | ACATTAATGTCAATGGCGGA+AGG | - | chr1_3:52976417-52976436 | Msa0124990:intron | 40.0% |
TGCAGTAGTTCATTCCTATG+AGG | - | chr1_3:52976749-52976768 | Msa0124990:intron | 40.0% | |
TCATTCCTATGAGGACAAAG+TGG | - | chr1_3:52976758-52976777 | Msa0124990:intron | 40.0% | |
TATTGCATAGGTTCCTCCTA+TGG | - | chr1_3:52976901-52976920 | Msa0124990:intron | 40.0% | |
ATTGCATAGGTTCCTCCTAT+GGG | - | chr1_3:52976902-52976921 | Msa0124990:intron | 40.0% | |
GTTGGATAGAACAATCCCAT+AGG | + | chr1_3:52976920-52976939 | None:intergenic | 40.0% | |
TTGTTCACAAACATGGTCAC+AGG | + | chr1_3:52977019-52977038 | None:intergenic | 40.0% | |
CATGGTCATTAAACCTAGCA+AGG | + | chr1_3:52977071-52977090 | None:intergenic | 40.0% | |
TGCTAGGTTTAATGACCATG+AGG | - | chr1_3:52977071-52977090 | Msa0124990:intron | 40.0% | |
!! | GGCAAATTGATTTTACCCGA+AGG | - | chr1_3:52977112-52977131 | Msa0124990:CDS | 40.0% |
TTCGGCTTAGTTGAAAAAGC+TGG | + | chr1_3:52977201-52977220 | None:intergenic | 40.0% | |
!! | TCAAGCCTTGTTTAGCTCTT+TGG | - | chr1_3:52977320-52977339 | Msa0124990:intron | 40.0% |
TAGTTCCTGCAGTTGAAGAA+AGG | - | chr1_3:52977517-52977536 | Msa0124990:intron | 40.0% | |
ACAAACCTTTCTTCAACTGC+AGG | + | chr1_3:52977525-52977544 | None:intergenic | 40.0% | |
! | GTTTCAATTTCCATTGGCCT+TGG | - | chr1_3:52977543-52977562 | Msa0124990:intron | 40.0% |
AATGCTAGGCAAATCTACCA+AGG | + | chr1_3:52977563-52977582 | None:intergenic | 40.0% | |
TGAAGCAATTGATACAGTGG+AGG | - | chr1_3:52977676-52977695 | Msa0124990:intron | 40.0% | |
TCCAACATTTGTGTCATGGA+AGG | - | chr1_3:52977845-52977864 | Msa0124990:intron | 40.0% | |
CCAACATTTGTGTCATGGAA+GGG | - | chr1_3:52977846-52977865 | Msa0124990:intron | 40.0% | |
! | TTGGAGTACTTGATGTAGGT+AGG | - | chr1_3:52978000-52978019 | Msa0124990:intron | 40.0% |
! | TGGAGTACTTGATGTAGGTA+GGG | - | chr1_3:52978001-52978020 | Msa0124990:intron | 40.0% |
GTAGGGATGCATGGATAAAT+CGG | - | chr1_3:52978018-52978037 | Msa0124990:intron | 40.0% | |
TAGGGATGCATGGATAAATC+GGG | - | chr1_3:52978019-52978038 | Msa0124990:intron | 40.0% | |
ATTCAAAGTGGGATTCACGT+TGG | - | chr1_3:52978050-52978069 | Msa0124990:intron | 40.0% | |
GGATTTCCTGCTGTTACAGT+AGG | - | chr1_3:52970041-52970060 | Msa0124990:intron | 45.0% | |
! | GTGAAGGAAGCGCAGATTTA+AGG | + | chr1_3:52970464-52970483 | None:intergenic | 45.0% |
!!! | TGGTTTTAGTCCCTGAGATC+AGG | - | chr1_3:52970841-52970860 | Msa0124990:intron | 45.0% |
! | GCCATGGGGCGTAATTTTAT+TGG | - | chr1_3:52971114-52971133 | Msa0124990:CDS | 45.0% |
ATTGGACCATGTATGGCATG+AGG | - | chr1_3:52971132-52971151 | Msa0124990:intron | 45.0% | |
TTGGACCATGTATGGCATGA+GGG | - | chr1_3:52971133-52971152 | Msa0124990:intron | 45.0% | |
TTAGTCCCTCATGCCATACA+TGG | + | chr1_3:52971141-52971160 | None:intergenic | 45.0% | |
CAACTGCACAGCATATGGAA+AGG | - | chr1_3:52971382-52971401 | Msa0124990:intron | 45.0% | |
CTTACGAGGGAAAGAGTTAC+TGG | + | chr1_3:52971557-52971576 | None:intergenic | 45.0% | |
CAGTAACTCTTTCCCTCGTA+AGG | - | chr1_3:52971555-52971574 | Msa0124990:intron | 45.0% | |
!! | CACTTTAGCGGTTTCAGGTT+TGG | + | chr1_3:52971898-52971917 | None:intergenic | 45.0% |
GTTGCTCTTGAGAGTGAAAG+TGG | + | chr1_3:52972050-52972069 | None:intergenic | 45.0% | |
! | CTGATGGACAAAATCCACAC+AGG | - | chr1_3:52972225-52972244 | Msa0124990:intron | 45.0% |
AAGGGTGAATCTTTCCTGTG+TGG | + | chr1_3:52972242-52972261 | None:intergenic | 45.0% | |
GGAAAGATTCACCCTTCACT+TGG | - | chr1_3:52972246-52972265 | Msa0124990:intron | 45.0% | |
GTGTTCTTCAGTTCCATCTG+TGG | - | chr1_3:52972364-52972383 | Msa0124990:intron | 45.0% | |
TTCAGTTCCATCTGTGGCTT+TGG | - | chr1_3:52972370-52972389 | Msa0124990:intron | 45.0% | |
TCAGTTCCATCTGTGGCTTT+GGG | - | chr1_3:52972371-52972390 | Msa0124990:intron | 45.0% | |
AACATACCCAAAGCCACAGA+TGG | + | chr1_3:52972380-52972399 | None:intergenic | 45.0% | |
ATGGTCTGACAAGTTGCTGA+AGG | - | chr1_3:52972582-52972601 | Msa0124990:intron | 45.0% | |
GAGTCTTTGGACCCAAAAGA+AGG | - | chr1_3:52972800-52972819 | Msa0124990:intron | 45.0% | |
CAGAAAGTTCATTTGTGGCG+AGG | - | chr1_3:52972862-52972881 | Msa0124990:intron | 45.0% | |
TTCAAATGTCCTCTGCGGAT+TGG | + | chr1_3:52972932-52972951 | None:intergenic | 45.0% | |
GGTTTAGTTGCTTGAGCCAT+TGG | - | chr1_3:52973287-52973306 | Msa0124990:intron | 45.0% | |
!! | GGCTATTTTGCAGGTGTTTG+AGG | - | chr1_3:52973491-52973510 | Msa0124990:intron | 45.0% |
GTACTGGAAGAACTCTGCTT+TGG | - | chr1_3:52973775-52973794 | Msa0124990:intron | 45.0% | |
AGCAAATAGAAGGCCATACC+TGG | + | chr1_3:52973816-52973835 | None:intergenic | 45.0% | |
! | ATGGACTGTCAAGCATACAG+TGG | + | chr1_3:52973891-52973910 | None:intergenic | 45.0% |
!! | TTATCAGGAAGGACTTGCTG+CGG | - | chr1_3:52973924-52973943 | Msa0124990:intron | 45.0% |
!! | CTTGCTGCGGTTTTTGGAAA+TGG | - | chr1_3:52973937-52973956 | Msa0124990:intron | 45.0% |
TTGCTACTGACATGGTAGGT+AGG | - | chr1_3:52974156-52974175 | Msa0124990:intron | 45.0% | |
! | AACTCTAACTTTTGGCGGTG+AGG | - | chr1_3:52974541-52974560 | Msa0124990:intron | 45.0% |
!! | CCTTAGATGGGCTGAATAGA+TGG | + | chr1_3:52975031-52975050 | None:intergenic | 45.0% |
CCATCTATTCAGCCCATCTA+AGG | - | chr1_3:52975028-52975047 | Msa0124990:CDS | 45.0% | |
!! | CTTTTGCTGACTGCCTATGA+TGG | + | chr1_3:52975386-52975405 | None:intergenic | 45.0% |
! | TTGGGAGTAAGATTGGTCCT+TGG | + | chr1_3:52975414-52975433 | None:intergenic | 45.0% |
TTTATGTGTGCTACGTGTGG+TGG | + | chr1_3:52975515-52975534 | None:intergenic | 45.0% | |
! | AGCTTTATGTGTGCTACGTG+TGG | + | chr1_3:52975518-52975537 | None:intergenic | 45.0% |
! | TAGGTCTTTTCCGAACGCTA+GGG | + | chr1_3:52975619-52975638 | None:intergenic | 45.0% |
! | TTAGGTCTTTTCCGAACGCT+AGG | + | chr1_3:52975620-52975639 | None:intergenic | 45.0% |
! | GGCTCATCGACAAAGTATCA+AGG | + | chr1_3:52975722-52975741 | None:intergenic | 45.0% |
ATCTGTTCGAATTTGTGGCC+AGG | + | chr1_3:52976032-52976051 | None:intergenic | 45.0% | |
AAACATGCCATAGTGGCCAA+TGG | - | chr1_3:52976457-52976476 | Msa0124990:CDS | 45.0% | |
CGCTATGGCCAATTTGTGAA+GGG | + | chr1_3:52976501-52976520 | None:intergenic | 45.0% | |
CCTTCACAAATTGGCCATAG+CGG | - | chr1_3:52976499-52976518 | Msa0124990:intron | 45.0% | |
! | AGTCTTGTCTTGTGAGATCC+TGG | + | chr1_3:52976786-52976805 | None:intergenic | 45.0% |
GGATAGAACAATCCCATAGG+AGG | + | chr1_3:52976917-52976936 | None:intergenic | 45.0% | |
GCTGGATAACTTTCCCACAT+GGG | + | chr1_3:52977183-52977202 | None:intergenic | 45.0% | |
AGCTGGATAACTTTCCCACA+TGG | + | chr1_3:52977184-52977203 | None:intergenic | 45.0% | |
!! | AGAAAATCTTGGCCTTGCAG+AGG | - | chr1_3:52977227-52977246 | Msa0124990:intron | 45.0% |
!! | AGTTGGTAATAGCCTCTGCA+AGG | + | chr1_3:52977242-52977261 | None:intergenic | 45.0% |
CCCTTCCATGACACAAATGT+TGG | + | chr1_3:52977849-52977868 | None:intergenic | 45.0% | |
ACATTTGTGTCATGGAAGGG+CGG | - | chr1_3:52977849-52977868 | Msa0124990:intron | 45.0% | |
TTGATGTAGGTAGGGATGCA+TGG | - | chr1_3:52978009-52978028 | Msa0124990:intron | 45.0% | |
CATGGATAAATCGGGAAGAC+TGG | - | chr1_3:52978027-52978046 | Msa0124990:intron | 45.0% | |
GGGAAGACTGGATTCAAAGT+GGG | - | chr1_3:52978039-52978058 | Msa0124990:intron | 45.0% | |
!! | TTATATTATTAGTATTTAAT+AGG | + | chr1_3:52969557-52969576 | None:intergenic | 5.0% |
!! | TTTAAAAATAAAATATAAAG+AGG | - | chr1_3:52969873-52969892 | Msa0124990:intron | 5.0% |
!!! | TGGTTTTAGTCCCTGAGACC+AGG | - | chr1_3:52970934-52970953 | Msa0124990:CDS | 50.0% |
CGAGGGAAAGAGTTACTGGA+AGG | + | chr1_3:52971553-52971572 | None:intergenic | 50.0% | |
TTATGTCGTCCAATCCGCAG+AGG | - | chr1_3:52972920-52972939 | Msa0124990:intron | 50.0% | |
ACAACACTATCCCATGCAGC+AGG | - | chr1_3:52972958-52972977 | Msa0124990:intron | 50.0% | |
GTGACATGTACCTGCTGCAT+GGG | + | chr1_3:52972971-52972990 | None:intergenic | 50.0% | |
AGTGACATGTACCTGCTGCA+TGG | + | chr1_3:52972972-52972991 | None:intergenic | 50.0% | |
!!! | GAAGGACTTGCTGCGGTTTT+TGG | - | chr1_3:52973931-52973950 | Msa0124990:intron | 50.0% |
TGGGCTGAATAGATGGCTCA+GGG | + | chr1_3:52975024-52975043 | None:intergenic | 50.0% | |
! | ATGGGCTGAATAGATGGCTC+AGG | + | chr1_3:52975025-52975044 | None:intergenic | 50.0% |
CTAGTCTGCACCCCTTAGAT+GGG | + | chr1_3:52975043-52975062 | None:intergenic | 50.0% | |
ACTCTTGTAGCCCTAGCGTT+CGG | - | chr1_3:52975606-52975625 | Msa0124990:CDS | 50.0% | |
CACAAAGACATCACCAGACC+TGG | - | chr1_3:52976011-52976030 | Msa0124990:intron | 50.0% | |
TTCGAATTTGTGGCCAGGTC+TGG | + | chr1_3:52976027-52976046 | None:intergenic | 50.0% | |
GTGGGCATCCCTTCACAAAT+TGG | - | chr1_3:52976490-52976509 | Msa0124990:CDS | 50.0% | |
CCGCTATGGCCAATTTGTGA+AGG | + | chr1_3:52976502-52976521 | None:intergenic | 50.0% | |
TGCACAATCGACAACCGCTA+TGG | + | chr1_3:52976516-52976535 | None:intergenic | 50.0% | |
TGGCACCACTTTGTCCTCAT+AGG | + | chr1_3:52976766-52976785 | None:intergenic | 50.0% | |
TATGAGGACAAAGTGGTGCC+AGG | - | chr1_3:52976765-52976784 | Msa0124990:intron | 50.0% | |
ATGTGTATCCTCCTCCACCA+CGG | - | chr1_3:52976954-52976973 | Msa0124990:intron | 50.0% | |
GAATGCACTAACCAAGTCCG+TGG | + | chr1_3:52976974-52976993 | None:intergenic | 50.0% | |
TGTCGGACATGTCAGACCTT+CGG | + | chr1_3:52977131-52977150 | None:intergenic | 50.0% | |
TTAATGGAGGGATGCCCATG+TGG | - | chr1_3:52977166-52977185 | Msa0124990:CDS | 50.0% | |
TAATGGAGGGATGCCCATGT+GGG | - | chr1_3:52977167-52977186 | Msa0124990:CDS | 50.0% | |
ACCAACTGCATTCTCTCAGC+TGG | - | chr1_3:52977255-52977274 | Msa0124990:intron | 50.0% | |
ACCAGCTGAGAGAATGCAGT+TGG | + | chr1_3:52977259-52977278 | None:intergenic | 50.0% | |
GGCAAATCTACCAAGGCCAA+TGG | + | chr1_3:52977556-52977575 | None:intergenic | 50.0% | |
CATTTGTGTCATGGAAGGGC+GGG | - | chr1_3:52977850-52977869 | Msa0124990:intron | 50.0% | |
ATTTGTGTCATGGAAGGGCG+GGG | - | chr1_3:52977851-52977870 | Msa0124990:intron | 50.0% | |
CGGGAAGACTGGATTCAAAG+TGG | - | chr1_3:52978038-52978057 | Msa0124990:intron | 50.0% | |
CAGCACCCTACTGTAACAGC+AGG | + | chr1_3:52970050-52970069 | None:intergenic | 55.0% | |
GCGTCAGCTTATTGGGCCAT+GGG | - | chr1_3:52971099-52971118 | Msa0124990:CDS | 55.0% | |
CGTCAGCTTATTGGGCCATG+GGG | - | chr1_3:52971100-52971119 | Msa0124990:CDS | 55.0% | |
! | ACTCTGCTTTGGCTCAGCAG+TGG | - | chr1_3:52973786-52973805 | Msa0124990:intron | 55.0% |
! | GCTAGTCTGCACCCCTTAGA+TGG | + | chr1_3:52975044-52975063 | None:intergenic | 55.0% |
TGTGTGCTACGTGTGGTGGT+TGG | + | chr1_3:52975511-52975530 | None:intergenic | 55.0% | |
!! | GGAAGCACCATTGGCCACTA+TGG | + | chr1_3:52976467-52976486 | None:intergenic | 55.0% |
TTGTGAAGGGATGCCCACCA+CGG | + | chr1_3:52976488-52976507 | None:intergenic | 55.0% | |
GGTGGAGGAGGATACACATC+AGG | + | chr1_3:52976953-52976972 | None:intergenic | 55.0% | |
ACTAACCAAGTCCGTGGTGG+AGG | + | chr1_3:52976968-52976987 | None:intergenic | 55.0% | |
TGCACTAACCAAGTCCGTGG+TGG | + | chr1_3:52976971-52976990 | None:intergenic | 55.0% | |
CCTAGCAAGGGAAACGACCA+GGG | + | chr1_3:52977058-52977077 | None:intergenic | 55.0% | |
ACCTAGCAAGGGAAACGACC+AGG | + | chr1_3:52977059-52977078 | None:intergenic | 55.0% | |
GTCGGACATGTCAGACCTTC+GGG | + | chr1_3:52977130-52977149 | None:intergenic | 55.0% | |
AGTCCCGGGCGTCAGCTTAT+TGG | - | chr1_3:52971091-52971110 | Msa0124990:CDS | 60.0% | |
GTCCCGGGCGTCAGCTTATT+GGG | - | chr1_3:52971092-52971111 | Msa0124990:CDS | 60.0% | |
TGGCCCAATAAGCTGACGCC+CGG | + | chr1_3:52971098-52971117 | None:intergenic | 60.0% | |
GGCGTCAGCTTATTGGGCCA+TGG | - | chr1_3:52971098-52971117 | Msa0124990:CDS | 60.0% | |
CAGCAGTGGTGCACCAGGTA+TGG | - | chr1_3:52973800-52973819 | Msa0124990:intron | 60.0% | |
AGTGGCCAATGGTGCTTCCG+TGG | - | chr1_3:52976468-52976487 | Msa0124990:CDS | 60.0% | |
GCCAATGGTGCTTCCGTGGT+GGG | - | chr1_3:52976472-52976491 | Msa0124990:CDS | 60.0% | |
ATCCTCCTCCACCACGGACT+TGG | - | chr1_3:52976960-52976979 | Msa0124990:intron | 60.0% | |
! | AACCAAGTCCGTGGTGGAGG+AGG | + | chr1_3:52976965-52976984 | None:intergenic | 60.0% |
CCCTGGTCGTTTCCCTTGCT+AGG | - | chr1_3:52977055-52977074 | Msa0124990:intron | 60.0% | |
! | TCTGGAATAGACTGGCGGCG+TGG | - | chr1_3:52977479-52977498 | Msa0124990:intron | 60.0% |
GGCCCAATAAGCTGACGCCC+GGG | + | chr1_3:52971097-52971116 | None:intergenic | 65.0% | |
TGGCTCAGCAGTGGTGCACC+AGG | - | chr1_3:52973795-52973814 | Msa0124990:intron | 65.0% | |
GGCCAATGGTGCTTCCGTGG+TGG | - | chr1_3:52976471-52976490 | Msa0124990:CDS | 65.0% | |
!! | GCCCACCACGGAAGCACCAT+TGG | + | chr1_3:52976476-52976495 | None:intergenic | 65.0% |
!! | GGCGGCGTGGCTCTGACAAA+TGG | - | chr1_3:52977492-52977511 | Msa0124990:intron | 65.0% |
TGTGTCATGGAAGGGCGGGG+CGG | - | chr1_3:52977854-52977873 | Msa0124990:intron | 65.0% | |
GCACAGATGGGGCGCGCTGA+TGG | - | chr1_3:52972209-52972228 | Msa0124990:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1_3 | gene | 52969404 | 52978468 | 52969404 | ID=Msa0124990;Name=Msa0124990 |
chr1_3 | mRNA | 52969404 | 52978468 | 52969404 | ID=Msa0124990-mRNA-1;Parent=Msa0124990;Name=Msa0124990-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|0.94|0.95|0.95|1|1|20|329|599 |
chr1_3 | exon | 52969404 | 52969876 | 52969404 | ID=Msa0124990-mRNA-1:exon:16314;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52969997 | 52970047 | 52969997 | ID=Msa0124990-mRNA-1:exon:16313;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52970175 | 52970220 | 52970175 | ID=Msa0124990-mRNA-1:exon:16312;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52970334 | 52970383 | 52970334 | ID=Msa0124990-mRNA-1:exon:16311;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52970471 | 52970514 | 52970471 | ID=Msa0124990-mRNA-1:exon:16310;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52970596 | 52970795 | 52970596 | ID=Msa0124990-mRNA-1:exon:16309;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52970891 | 52970961 | 52970891 | ID=Msa0124990-mRNA-1:exon:16308;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52971054 | 52971143 | 52971054 | ID=Msa0124990-mRNA-1:exon:16307;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52971755 | 52971886 | 52971755 | ID=Msa0124990-mRNA-1:exon:16306;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52973310 | 52973360 | 52973310 | ID=Msa0124990-mRNA-1:exon:16305;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52973852 | 52973941 | 52973852 | ID=Msa0124990-mRNA-1:exon:16304;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52974056 | 52974120 | 52974056 | ID=Msa0124990-mRNA-1:exon:16303;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52974248 | 52974368 | 52974248 | ID=Msa0124990-mRNA-1:exon:16302;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52974893 | 52975098 | 52974893 | ID=Msa0124990-mRNA-1:exon:16301;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52975555 | 52975657 | 52975555 | ID=Msa0124990-mRNA-1:exon:16300;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52976296 | 52976361 | 52976296 | ID=Msa0124990-mRNA-1:exon:16299;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52976450 | 52976509 | 52976450 | ID=Msa0124990-mRNA-1:exon:16298;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52977103 | 52977212 | 52977103 | ID=Msa0124990-mRNA-1:exon:16297;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52977344 | 52977416 | 52977344 | ID=Msa0124990-mRNA-1:exon:16296;Parent=Msa0124990-mRNA-1 |
chr1_3 | exon | 52978442 | 52978468 | 52978442 | ID=Msa0124990-mRNA-1:exon:16295;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52978442 | 52978468 | 52978442 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52977344 | 52977416 | 52977344 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52977103 | 52977212 | 52977103 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52976450 | 52976509 | 52976450 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52976296 | 52976361 | 52976296 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52975555 | 52975657 | 52975555 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52974893 | 52975098 | 52974893 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52974248 | 52974368 | 52974248 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52974056 | 52974120 | 52974056 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52973852 | 52973941 | 52973852 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52973310 | 52973360 | 52973310 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52971755 | 52971886 | 52971755 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52971054 | 52971143 | 52971054 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52970891 | 52970961 | 52970891 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52970596 | 52970795 | 52970596 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52970471 | 52970514 | 52970471 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52970334 | 52970383 | 52970334 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52970175 | 52970220 | 52970175 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52969997 | 52970047 | 52969997 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | CDS | 52969733 | 52969876 | 52969733 | ID=Msa0124990-mRNA-1:cds;Parent=Msa0124990-mRNA-1 |
chr1_3 | three_prime_UTR | 52969404 | 52969732 | 52969404 | ID=Msa0124990-mRNA-1:three_prime_utr;Parent=Msa0124990-mRNA-1 |
Gene Sequence |
Protein sequence |