Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134210 | sp|Q8GW72|FUCO1_ARATH | 53.173 | 457 | 202 | 5 | 32 | 482 | 31 | 481 | 1.19e-174 | 503 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134210 | G7ID38 | 96.939 | 490 | 15 | 0 | 1 | 490 | 1 | 490 | 0.0 | 986 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0094850 | Msa0134210 | 0.806017 | 1.008743e-49 | -8.615850e-47 |
| Msa0134210 | Msa0180910 | 0.858908 | 5.961426e-63 | -8.615850e-47 |
| Msa0134210 | Msa0447370 | 0.801634 | 8.207795e-49 | -8.615850e-47 |
| Msa0134210 | Msa0513160 | 0.807395 | 5.161841e-50 | -8.615850e-47 |
| Msa0134210 | Msa0587940 | 0.800469 | 1.420078e-48 | -8.615850e-47 |
| Msa0134210 | Msa0628890 | 0.814047 | 1.879373e-51 | -8.615850e-47 |
| Msa0134210 | Msa0702340 | 0.803049 | 4.196441e-49 | -8.615850e-47 |
| Msa0134210 | Msa0702590 | 0.813439 | 2.558490e-51 | -8.615850e-47 |
| Msa0134210 | Msa0702660 | 0.807741 | 4.359461e-50 | -8.615850e-47 |
| Msa0134210 | Msa0839560 | 0.819084 | 1.398241e-52 | -8.615850e-47 |
| Msa0134210 | Msa1024740 | 0.805992 | 1.021243e-49 | -8.615850e-47 |
| Msa0134210 | Msa1108790 | 0.802373 | 5.787108e-49 | -8.615850e-47 |
| Msa0134210 | Msa1152510 | 0.832546 | 8.889250e-56 | -8.615850e-47 |
| Msa0134210 | Msa1224840 | 0.811371 | 7.240638e-51 | -8.615850e-47 |
| Msa0134210 | Msa1292830 | 0.804803 | 1.812324e-49 | -8.615850e-47 |
| Msa0134210 | Msa1421460 | 0.805826 | 1.106558e-49 | -8.615850e-47 |
| Msa0134210 | Msa1445190 | 0.806568 | 7.724047e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134210 | MtrunA17_Chr1g0204281 | 96.939 | 490 | 15 | 0 | 1 | 490 | 1 | 490 | 0.0 | 986 |
| Msa0134210 | MtrunA17_Chr2g0327361 | 49.666 | 449 | 213 | 7 | 40 | 481 | 63 | 505 | 3.16e-147 | 432 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0134210 | AT2G28100.1 | 53.173 | 457 | 202 | 5 | 32 | 482 | 31 | 481 | 1.21e-175 | 503 |
Find 118 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGACCATTGGATTGAAATT+TGG | 0.127867 | 1_3:+65719992 | Msa0134210:CDS |
| ATCATAATGTTCCTTCATTT+TGG | 0.171411 | 1_3:+65717532 | Msa0134210:CDS |
| GCTTTACAATGAATACTATT+TGG | 0.197540 | 1_3:+65717879 | Msa0134210:CDS |
| ATCAAGATGTTAGGGAAATT+TGG | 0.202068 | 1_3:+65718150 | Msa0134210:CDS |
| TGAAAGAGATGTTCGATTAA+TGG | 0.224854 | 1_3:-65718342 | None:intergenic |
| ATTATAGATATCAAGATGTT+AGG | 0.257376 | 1_3:+65718141 | Msa0134210:intron |
| CAATTCGTCCAGGATGGTTT+TGG | 0.262464 | 1_3:+65719659 | Msa0134210:CDS |
| GGACCATTGGATTGAAATTT+GGG | 0.266593 | 1_3:+65719993 | Msa0134210:CDS |
| GGTAGCCAATCTGTCCCTTT+TGG | 0.269654 | 1_3:-65719619 | None:intergenic |
| GTGCCTCTTATTTCTTCTAT+TGG | 0.273115 | 1_3:+65720219 | Msa0134210:CDS |
| GATATAAGACCAGTTGTATT+AGG | 0.280429 | 1_3:-65719775 | None:intergenic |
| CAACATATTCACAATTAAAA+TGG | 0.285708 | 1_3:+65717497 | Msa0134210:CDS |
| AGATAATTATACATTGTTCT+AGG | 0.294445 | 1_3:+65720291 | Msa0134210:exon |
| CCAATTGGATTGAATATTGA+TGG | 0.296687 | 1_3:-65717601 | None:intergenic |
| AGCTGCCACATTGGCCCATT+GGG | 0.297882 | 1_3:-65717635 | None:intergenic |
| ATTCTGTCATTAGTAGTAAA+TGG | 0.309779 | 1_3:+65717737 | Msa0134210:CDS |
| GTTAGGGAAATTTGGTTTGA+TGG | 0.313655 | 1_3:+65718158 | Msa0134210:CDS |
| GGAGGAAAAGAGGGAGGGTT+TGG | 0.323052 | 1_3:+65719901 | Msa0134210:CDS |
| ATTAGTAGTAAATGGCAAAA+TGG | 0.351247 | 1_3:+65717745 | Msa0134210:CDS |
| AATCGAACATCTCTTTCAAT+TGG | 0.354601 | 1_3:+65718347 | Msa0134210:CDS |
| CAGCTGCCACATTGGCCCAT+TGG | 0.354819 | 1_3:-65717636 | None:intergenic |
| GTGACCATTTGTGGTCATAT+TGG | 0.356144 | 1_3:+65719944 | Msa0134210:CDS |
| AAATGCAGAAATTGTTTAGT+TGG | 0.369497 | 1_3:-65717426 | None:intergenic |
| AAGAGGCTTCATAGGCTTGA+TGG | 0.370002 | 1_3:+65720144 | Msa0134210:CDS |
| GTAAACCTTGAGTGCCAAAA+AGG | 0.377456 | 1_3:-65720255 | None:intergenic |
| GGGGATGAAACAGGGACTGC+AGG | 0.403401 | 1_3:+65718302 | Msa0134210:CDS |
| ATGCTGGACCTGATGTTAGA+TGG | 0.407697 | 1_3:+65718276 | Msa0134210:CDS |
| TTGGTTACAAGAGGCTTCAT+AGG | 0.408848 | 1_3:+65720136 | Msa0134210:CDS |
| GATAGACATGATTCTAGATA+TGG | 0.419077 | 1_3:+65717847 | Msa0134210:CDS |
| CCATCAATATTCAATCCAAT+TGG | 0.419941 | 1_3:+65717601 | Msa0134210:CDS |
| TGGGTTGTGTTGAGTCCAAT+TGG | 0.421398 | 1_3:-65717616 | None:intergenic |
| ATAATCAAAGGGACAACAAT+TGG | 0.424832 | 1_3:+65720117 | Msa0134210:CDS |
| TTATAGATATCAAGATGTTA+GGG | 0.425767 | 1_3:+65718142 | Msa0134210:intron |
| GAATGTTTAGTGTACTTAGA+TGG | 0.426757 | 1_3:-65717718 | None:intergenic |
| TGGGATCTATCTTTCACCTT+GGG | 0.427910 | 1_3:+65717825 | Msa0134210:CDS |
| TACATTCAGTGACAGTGAAT+GGG | 0.434150 | 1_3:+65717561 | Msa0134210:CDS |
| GTCAATGCAGCCACTCATAA+AGG | 0.434756 | 1_3:+65717793 | Msa0134210:CDS |
| TTGTCTCAAAGTATCGTGAT+TGG | 0.437602 | 1_3:+65720540 | Msa0134210:three_prime_UTR |
| TATGTTGGGAGTGGGAGAAT+TGG | 0.437729 | 1_3:-65717481 | None:intergenic |
| GATATTTATTACAAATCTGT+TGG | 0.439112 | 1_3:+65719721 | Msa0134210:CDS |
| ATATTTATTACAAATCTGTT+GGG | 0.448093 | 1_3:+65719722 | Msa0134210:CDS |
| GGACCTGATGTTAGATGGGT+GGG | 0.451903 | 1_3:+65718281 | Msa0134210:CDS |
| AATATACCTCCTAATACAAC+TGG | 0.459105 | 1_3:+65719766 | Msa0134210:CDS |
| TAGTAAATGGCAAAATGGTA+AGG | 0.461048 | 1_3:+65717750 | Msa0134210:CDS |
| ATTAGAATACAAGAAGCAAT+TGG | 0.462230 | 1_3:+65720045 | Msa0134210:CDS |
| GCCAATGTGGCAGCTGAAGC+AGG | 0.463082 | 1_3:+65717643 | Msa0134210:CDS |
| TTGGGATCTATCTTTCACCT+TGG | 0.463871 | 1_3:+65717824 | Msa0134210:CDS |
| CACAATTAAAATGGCAACAA+AGG | 0.465362 | 1_3:+65717506 | Msa0134210:CDS |
| CTCATAAAGGAATTGATGTT+GGG | 0.467433 | 1_3:+65717806 | Msa0134210:CDS |
| ATACATTCAGTGACAGTGAA+TGG | 0.468228 | 1_3:+65717560 | Msa0134210:CDS |
| TTGAATAGAGCTAAGACAAA+AGG | 0.479696 | 1_3:-65717270 | None:intergenic |
| CTGAACACTGGTGATCCAAA+AGG | 0.480861 | 1_3:+65719604 | Msa0134210:CDS |
| GACCTGATGTTAGATGGGTG+GGG | 0.483980 | 1_3:+65718282 | Msa0134210:CDS |
| GCATGTAACATAGAATTTGA+TGG | 0.486843 | 1_3:+65720370 | Msa0134210:three_prime_UTR |
| GACCCCACGGGAAGATGATA+AGG | 0.487059 | 1_3:+65719966 | Msa0134210:CDS |
| GGGTCCAATATGACCACAAA+TGG | 0.488108 | 1_3:-65719948 | None:intergenic |
| ATTGAAATTTGGGATAATGA+TGG | 0.496559 | 1_3:+65720003 | Msa0134210:CDS |
| TAGCCTGAGAGGAGGAAAAG+AGG | 0.496786 | 1_3:+65719891 | Msa0134210:CDS |
| ACTCATAAAGGAATTGATGT+TGG | 0.497734 | 1_3:+65717805 | Msa0134210:CDS |
| GTGATCCAAAAGGGACAGAT+TGG | 0.503672 | 1_3:+65719614 | Msa0134210:CDS |
| GATTTATGCCAAAACCATCC+TGG | 0.507336 | 1_3:-65719667 | None:intergenic |
| ACAATTAAAATGGCAACAAA+GGG | 0.509788 | 1_3:+65717507 | Msa0134210:CDS |
| AATCCAATAGAAGAAATAAG+AGG | 0.511126 | 1_3:-65720222 | None:intergenic |
| TATCCCAAATTTCAATCCAA+TGG | 0.511652 | 1_3:-65719996 | None:intergenic |
| TTTCCTTATCATCTTCCCGT+GGG | 0.516315 | 1_3:-65719969 | None:intergenic |
| ATGATAAGGAAAAGGACCAT+TGG | 0.516958 | 1_3:+65719980 | Msa0134210:CDS |
| GGATGAAACAGGGACTGCAG+GGG | 0.521831 | 1_3:+65718304 | Msa0134210:CDS |
| AGAATTGGTAATGGTGGACT+TGG | 0.522348 | 1_3:-65717466 | None:intergenic |
| TGGACTCAACACAACCCAAT+GGG | 0.523022 | 1_3:+65717621 | Msa0134210:CDS |
| AGAAAATAAATGATTATATG+TGG | 0.523653 | 1_3:+65720345 | Msa0134210:three_prime_UTR |
| TGAACACTGGTGATCCAAAA+GGG | 0.523830 | 1_3:+65719605 | Msa0134210:CDS |
| AGCCTGAGAGGAGGAAAAGA+GGG | 0.526697 | 1_3:+65719892 | Msa0134210:CDS |
| ATACAAGAAGCAATTGGACT+TGG | 0.526995 | 1_3:+65720051 | Msa0134210:CDS |
| GATGGTAAATCAATAATCAA+AGG | 0.528545 | 1_3:+65720105 | Msa0134210:CDS |
| ACGGGAAGATGATAAGGAAA+AGG | 0.529325 | 1_3:+65719972 | Msa0134210:CDS |
| CGGTATGAAATTTATGTGGA+TGG | 0.530893 | 1_3:+65720087 | Msa0134210:CDS |
| ACCTGATGTTAGATGGGTGG+GGG | 0.535445 | 1_3:+65718283 | Msa0134210:CDS |
| GGGATGAAACAGGGACTGCA+GGG | 0.538975 | 1_3:+65718303 | Msa0134210:CDS |
| ATTAGATTTATAAAAGCTAG+AGG | 0.542281 | 1_3:+65720195 | Msa0134210:CDS |
| TCCTGCTTCAGCTGCCACAT+TGG | 0.544247 | 1_3:-65717644 | None:intergenic |
| ATGGTAAATCAATAATCAAA+GGG | 0.544860 | 1_3:+65720106 | Msa0134210:CDS |
| TGCTGGACCTGATGTTAGAT+GGG | 0.544993 | 1_3:+65718277 | Msa0134210:CDS |
| CATGTAACATAGAATTTGAT+GGG | 0.545662 | 1_3:+65720371 | Msa0134210:three_prime_UTR |
| TGTTGGATAGTGACCATTTG+TGG | 0.550799 | 1_3:+65719935 | Msa0134210:CDS |
| ATGTATTGACACCAAAATGA+AGG | 0.551164 | 1_3:-65717543 | None:intergenic |
| AGTGGGAGAATTGGTAATGG+TGG | 0.551441 | 1_3:-65717472 | None:intergenic |
| ATGTTTCAATTCGTCCAGGA+TGG | 0.551993 | 1_3:+65719653 | Msa0134210:CDS |
| CGAACGGTATGAAATTTATG+TGG | 0.552572 | 1_3:+65720083 | Msa0134210:CDS |
| TGTGATGTTTCAATTCGTCC+AGG | 0.557675 | 1_3:+65719649 | Msa0134210:CDS |
| AATTGTGAATATGTTGGGAG+TGG | 0.561756 | 1_3:-65717490 | None:intergenic |
| AGTAAATGGCAAAATGGTAA+GGG | 0.562737 | 1_3:+65717751 | Msa0134210:CDS |
| AGTGACAGTGAATGGGGCAC+AGG | 0.567340 | 1_3:+65717568 | Msa0134210:CDS |
| TGGACCTGATGTTAGATGGG+TGG | 0.567902 | 1_3:+65718280 | Msa0134210:CDS |
| ATTGAAACATCACATTCTGC+TGG | 0.577257 | 1_3:-65719640 | None:intergenic |
| GGACTGCAGGGGACACGTGT+TGG | 0.580171 | 1_3:+65718315 | Msa0134210:CDS |
| AACATCAATTCCTTTATGAG+TGG | 0.581747 | 1_3:-65717803 | None:intergenic |
| GGACAACAATTGGTTACAAG+AGG | 0.582247 | 1_3:+65720127 | Msa0134210:CDS |
| ATTGTGAATATGTTGGGAGT+GGG | 0.592387 | 1_3:-65717489 | None:intergenic |
| TTAACTGCAAAACACCATGA+TGG | 0.593261 | 1_3:+65717682 | Msa0134210:CDS |
| GTGGTCATATTGGACCCCAC+GGG | 0.597817 | 1_3:+65719954 | Msa0134210:CDS |
| GTTAAAGTTAGTAGCCTGAG+AGG | 0.598880 | 1_3:+65719880 | Msa0134210:CDS |
| GCCAGAGACAAAATCCATCA+TGG | 0.599754 | 1_3:-65717696 | None:intergenic |
| TGTGGTCATATTGGACCCCA+CGG | 0.603037 | 1_3:+65719953 | Msa0134210:CDS |
| GGGAGTGGGAGAATTGGTAA+TGG | 0.606935 | 1_3:-65717475 | None:intergenic |
| TTGGACTCAACACAACCCAA+TGG | 0.610982 | 1_3:+65717620 | Msa0134210:CDS |
| AGAACAGCATAGTCTAGCCA+TGG | 0.614625 | 1_3:-65717380 | None:intergenic |
| CTGAGAGGAGGAAAAGAGGG+AGG | 0.617702 | 1_3:+65719895 | Msa0134210:CDS |
| TGATGGAGCAAAAGATCCCA+AGG | 0.618842 | 1_3:+65718175 | Msa0134210:CDS |
| ATAAGACCAGTTGTATTAGG+AGG | 0.619708 | 1_3:-65719772 | None:intergenic |
| CACAACCCAATGGGCCAATG+TGG | 0.621945 | 1_3:+65717630 | Msa0134210:CDS |
| CTAGAATCATGTCTATCCCA+AGG | 0.622150 | 1_3:-65717841 | None:intergenic |
| GTTTGGTCCAGAAAACATGT+TGG | 0.626617 | 1_3:+65719918 | Msa0134210:CDS |
| ACATTCAGTGACAGTGAATG+GGG | 0.634561 | 1_3:+65717562 | Msa0134210:CDS |
| TGAGAGGAGGAAAAGAGGGA+GGG | 0.637912 | 1_3:+65719896 | Msa0134210:CDS |
| AAAGTTAGTAGCCTGAGAGG+AGG | 0.643923 | 1_3:+65719883 | Msa0134210:CDS |
| CAATGCAGGTATCTGAACAC+TGG | 0.649417 | 1_3:+65719592 | Msa0134210:intron |
| TTCCTTATCATCTTCCCGTG+GGG | 0.651640 | 1_3:-65719968 | None:intergenic |
| GACTTGGTCAAAGAATCGAA+CGG | 0.716057 | 1_3:+65720067 | Msa0134210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAAATACTTTTGAT+CGG | - | chr1_3:65719025-65719044 | None:intergenic | 10.0% |
| !!! | ATTTTAATTGTGAATATGTT+GGG | - | chr1_3:65717498-65717517 | None:intergenic | 15.0% |
| !!! | CGTAACTTTTATTAAAATTA+TGG | - | chr1_3:65718036-65718055 | None:intergenic | 15.0% |
| !! | CAATAAATTTGATAAAATCA+CGG | - | chr1_3:65718066-65718085 | None:intergenic | 15.0% |
| !!! | TTACATATTATTTTTCAGAT+TGG | + | chr1_3:65718207-65718226 | Msa0134210:CDS | 15.0% |
| !!! | AATTATATTAAACAGTTTTG+AGG | + | chr1_3:65719065-65719084 | Msa0134210:intron | 15.0% |
| !!! | ACATATTACATTCAATTTTA+AGG | - | chr1_3:65719212-65719231 | None:intergenic | 15.0% |
| !! | TAAAATTGAATGTAATATGT+CGG | + | chr1_3:65719212-65719231 | Msa0134210:intron | 15.0% |
| !!! | TTTTTCTTTTTCTTTTTTAG+AGG | + | chr1_3:65719371-65719390 | Msa0134210:intron | 15.0% |
| !! | AAACTAGTAAAATATTTAGT+GGG | + | chr1_3:65719438-65719457 | Msa0134210:intron | 15.0% |
| !!! | TTAATATAATTTGTTCATGA+TGG | - | chr1_3:65719506-65719525 | None:intergenic | 15.0% |
| !! | ATATTTATTACAAATCTGTT+GGG | + | chr1_3:65719722-65719741 | Msa0134210:CDS | 15.0% |
| !! | AGAAAATAAATGATTATATG+TGG | + | chr1_3:65720345-65720364 | Msa0134210:three_prime_UTR | 15.0% |
| !! | ATATATGAAAAAACATTGAA+TGG | - | chr1_3:65720516-65720535 | None:intergenic | 15.0% |
| !!! | TTGTTTTTTCTCTTTTTGTT+TGG | - | chr1_3:65717351-65717370 | None:intergenic | 20.0% |
| !!! | CATTTTAATTGTGAATATGT+TGG | - | chr1_3:65717499-65717518 | None:intergenic | 20.0% |
| !! | CAACATATTCACAATTAAAA+TGG | + | chr1_3:65717497-65717516 | Msa0134210:CDS | 20.0% |
| !! | GTCAAATTCTTAATTATCAT+TGG | - | chr1_3:65718102-65718121 | None:intergenic | 20.0% |
| !! | ATTATAGATATCAAGATGTT+AGG | + | chr1_3:65718141-65718160 | Msa0134210:intron | 20.0% |
| !! | TTATAGATATCAAGATGTTA+GGG | + | chr1_3:65718142-65718161 | Msa0134210:intron | 20.0% |
| !! | ATATTCCTTTCTAAATCAAA+AGG | + | chr1_3:65718607-65718626 | Msa0134210:intron | 20.0% |
| !! | TAATTGAAGACTTAATTAGT+TGG | - | chr1_3:65718746-65718765 | None:intergenic | 20.0% |
| !!! | AACAAAAGGAACTTTATTTT+AGG | + | chr1_3:65718917-65718936 | Msa0134210:intron | 20.0% |
| !!! | CTATTTTATCATCAATCTTA+GGG | - | chr1_3:65718967-65718986 | None:intergenic | 20.0% |
| !!! | TCTATTTTATCATCAATCTT+AGG | - | chr1_3:65718968-65718987 | None:intergenic | 20.0% |
| !!! | ATCAAATACATTTGACTTTT+TGG | + | chr1_3:65719163-65719182 | Msa0134210:intron | 20.0% |
| !!! | TTTGGCTTAATTGAATATTT+AGG | - | chr1_3:65719337-65719356 | None:intergenic | 20.0% |
| !! | CAAACTAGTAAAATATTTAG+TGG | + | chr1_3:65719437-65719456 | Msa0134210:intron | 20.0% |
| !! | GATATTTATTACAAATCTGT+TGG | + | chr1_3:65719721-65719740 | Msa0134210:CDS | 20.0% |
| !! | ATGGTAAATCAATAATCAAA+GGG | + | chr1_3:65720106-65720125 | Msa0134210:CDS | 20.0% |
| !! | ATTAGATTTATAAAAGCTAG+AGG | + | chr1_3:65720195-65720214 | Msa0134210:CDS | 20.0% |
| !! | AGATAATTATACATTGTTCT+AGG | + | chr1_3:65720291-65720310 | Msa0134210:exon | 20.0% |
| !!! | TTTGTTTGGTTTTCTTTTGA+GGG | - | chr1_3:65717337-65717356 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGGTTTTCTTTTG+AGG | - | chr1_3:65717338-65717357 | None:intergenic | 25.0% |
| ! | AAATGCAGAAATTGTTTAGT+TGG | - | chr1_3:65717429-65717448 | None:intergenic | 25.0% |
| ! | ACAATTAAAATGGCAACAAA+GGG | + | chr1_3:65717507-65717526 | Msa0134210:CDS | 25.0% |
| !! | ATCATAATGTTCCTTCATTT+TGG | + | chr1_3:65717532-65717551 | Msa0134210:CDS | 25.0% |
| ! | ATTCTGTCATTAGTAGTAAA+TGG | + | chr1_3:65717737-65717756 | Msa0134210:CDS | 25.0% |
| ! | ATTAGTAGTAAATGGCAAAA+TGG | + | chr1_3:65717745-65717764 | Msa0134210:CDS | 25.0% |
| ! | GCTTTACAATGAATACTATT+TGG | + | chr1_3:65717879-65717898 | Msa0134210:CDS | 25.0% |
| ! | CTTAATTATCATTGGATATC+TGG | - | chr1_3:65718094-65718113 | None:intergenic | 25.0% |
| !!! | TTTTTCAGATTGGTTTTCTA+TGG | + | chr1_3:65718217-65718236 | Msa0134210:CDS | 25.0% |
| ! | TTAACATAGCTAGAATGATA+AGG | + | chr1_3:65718479-65718498 | Msa0134210:intron | 25.0% |
| ! | ATCCTAAGCAAAAAAAATGT+GGG | + | chr1_3:65718656-65718675 | Msa0134210:intron | 25.0% |
| ! | AAACATGATTTATGAGACAA+CGG | - | chr1_3:65718690-65718709 | None:intergenic | 25.0% |
| ! | TAAGTCCTTCCAAAATTTAA+TGG | + | chr1_3:65718791-65718810 | Msa0134210:intron | 25.0% |
| !! | ACATTTGGACCATTAAATTT+TGG | - | chr1_3:65718803-65718822 | None:intergenic | 25.0% |
| ! | AGCATTCTAACATTAACATT+TGG | - | chr1_3:65718818-65718837 | None:intergenic | 25.0% |
| ! | AAACATGACAACAACAATTA+GGG | + | chr1_3:65718870-65718889 | Msa0134210:intron | 25.0% |
| !!! | GAACTTTATTTTAGGAATTG+AGG | + | chr1_3:65718925-65718944 | Msa0134210:intron | 25.0% |
| !! | CTTTTGATCGGAATATAAAT+TGG | - | chr1_3:65719013-65719032 | None:intergenic | 25.0% |
| ! | AAGCAAAAGTAAAATGCATT+TGG | + | chr1_3:65719129-65719148 | Msa0134210:intron | 25.0% |
| !!! | TCAATTTTAAGGTACATCTT+CGG | - | chr1_3:65719201-65719220 | None:intergenic | 25.0% |
| ! | AATTGCATAATCATGATACA+TGG | + | chr1_3:65719308-65719327 | Msa0134210:intron | 25.0% |
| ! | ATTGCATAATCATGATACAT+GGG | + | chr1_3:65719309-65719328 | Msa0134210:intron | 25.0% |
| !! | AAAAGTCAACACTACTATTT+TGG | - | chr1_3:65719355-65719374 | None:intergenic | 25.0% |
| ! | AGTAAAATATTTAGTGGGAT+CGG | + | chr1_3:65719443-65719462 | Msa0134210:intron | 25.0% |
| ! | CAAAAAGCAAAACAAATCAA+CGG | + | chr1_3:65719478-65719497 | Msa0134210:intron | 25.0% |
| !!! | ACTTAGTTTTTTTGGTGATT+CGG | - | chr1_3:65719692-65719711 | None:intergenic | 25.0% |
| !! | ATTGAAATTTGGGATAATGA+TGG | + | chr1_3:65720003-65720022 | Msa0134210:CDS | 25.0% |
| ! | ATTAGAATACAAGAAGCAAT+TGG | + | chr1_3:65720045-65720064 | Msa0134210:CDS | 25.0% |
| ! | GATGGTAAATCAATAATCAA+AGG | + | chr1_3:65720105-65720124 | Msa0134210:CDS | 25.0% |
| ! | AATCCAATAGAAGAAATAAG+AGG | - | chr1_3:65720225-65720244 | None:intergenic | 25.0% |
| !!! | GATTACATTTTGATCCTTTT+TGG | + | chr1_3:65720241-65720260 | Msa0134210:CDS | 25.0% |
| ! | CATGTAACATAGAATTTGAT+GGG | + | chr1_3:65720371-65720390 | Msa0134210:three_prime_UTR | 25.0% |
| TTGAATAGAGCTAAGACAAA+AGG | - | chr1_3:65717273-65717292 | None:intergenic | 30.0% | |
| AAAAACAATCAAGATCACCA+TGG | + | chr1_3:65717363-65717382 | Msa0134210:exon | 30.0% | |
| CACAATTAAAATGGCAACAA+AGG | + | chr1_3:65717506-65717525 | Msa0134210:CDS | 30.0% | |
| ! | ATGTATTGACACCAAAATGA+AGG | - | chr1_3:65717546-65717565 | None:intergenic | 30.0% |
| CCAATTGGATTGAATATTGA+TGG | - | chr1_3:65717604-65717623 | None:intergenic | 30.0% | |
| CCATCAATATTCAATCCAAT+TGG | + | chr1_3:65717601-65717620 | Msa0134210:CDS | 30.0% | |
| GAATGTTTAGTGTACTTAGA+TGG | - | chr1_3:65717721-65717740 | None:intergenic | 30.0% | |
| TAGTAAATGGCAAAATGGTA+AGG | + | chr1_3:65717750-65717769 | Msa0134210:CDS | 30.0% | |
| AGTAAATGGCAAAATGGTAA+GGG | + | chr1_3:65717751-65717770 | Msa0134210:CDS | 30.0% | |
| AACATCAATTCCTTTATGAG+TGG | - | chr1_3:65717806-65717825 | None:intergenic | 30.0% | |
| ACTCATAAAGGAATTGATGT+TGG | + | chr1_3:65717805-65717824 | Msa0134210:CDS | 30.0% | |
| CTCATAAAGGAATTGATGTT+GGG | + | chr1_3:65717806-65717825 | Msa0134210:CDS | 30.0% | |
| GATAGACATGATTCTAGATA+TGG | + | chr1_3:65717847-65717866 | Msa0134210:CDS | 30.0% | |
| TCATAGATTAAGTGCATGTT+TGG | + | chr1_3:65717975-65717994 | Msa0134210:intron | 30.0% | |
| ATCAAGATGTTAGGGAAATT+TGG | + | chr1_3:65718150-65718169 | Msa0134210:CDS | 30.0% | |
| ! | TATGTAACATTTTGTGCCTT+GGG | - | chr1_3:65718194-65718213 | None:intergenic | 30.0% |
| ! | ATATGTAACATTTTGTGCCT+TGG | - | chr1_3:65718195-65718214 | None:intergenic | 30.0% |
| ! | ATCAATATTTTCTCAGATGC+TGG | + | chr1_3:65718260-65718279 | Msa0134210:CDS | 30.0% |
| TGAAAGAGATGTTCGATTAA+TGG | - | chr1_3:65718345-65718364 | None:intergenic | 30.0% | |
| AATCGAACATCTCTTTCAAT+TGG | + | chr1_3:65718347-65718366 | Msa0134210:CDS | 30.0% | |
| !!! | TGTAGAATCAACCACTTTTT+TGG | - | chr1_3:65718429-65718448 | None:intergenic | 30.0% |
| ATAGCTAGAATGATAAGGTA+CGG | + | chr1_3:65718484-65718503 | Msa0134210:intron | 30.0% | |
| TCCTTTCTAAATCAAAAGGT+AGG | + | chr1_3:65718611-65718630 | Msa0134210:intron | 30.0% | |
| !!! | ACCTACCTTTTGATTTAGAA+AGG | - | chr1_3:65718615-65718634 | None:intergenic | 30.0% |
| TTCTAAATCAAAAGGTAGGT+AGG | + | chr1_3:65718615-65718634 | Msa0134210:intron | 30.0% | |
| !!! | CACATTTTTTTTGCTTAGGA+TGG | - | chr1_3:65718657-65718676 | None:intergenic | 30.0% |
| CATCCTAAGCAAAAAAAATG+TGG | + | chr1_3:65718655-65718674 | Msa0134210:intron | 30.0% | |
| !!! | AACCCACATTTTTTTTGCTT+AGG | - | chr1_3:65718661-65718680 | None:intergenic | 30.0% |
| CTTAATTAGTTGGTTGCTTA+GGG | - | chr1_3:65718736-65718755 | None:intergenic | 30.0% | |
| ACTTAATTAGTTGGTTGCTT+AGG | - | chr1_3:65718737-65718756 | None:intergenic | 30.0% | |
| ! | TTGGACCATTAAATTTTGGA+AGG | - | chr1_3:65718799-65718818 | None:intergenic | 30.0% |
| CAAACATGACAACAACAATT+AGG | + | chr1_3:65718869-65718888 | Msa0134210:intron | 30.0% | |
| AAAGAGAGAACACTAACAAA+AGG | + | chr1_3:65718903-65718922 | Msa0134210:intron | 30.0% | |
| TTATCATCAATCTTAGGGTT+AGG | - | chr1_3:65718962-65718981 | None:intergenic | 30.0% | |
| ! | CAATTTTCTTCTCACACATA+TGG | - | chr1_3:65719293-65719312 | None:intergenic | 30.0% |
| TTGCATAATCATGATACATG+GGG | + | chr1_3:65719310-65719329 | Msa0134210:intron | 30.0% | |
| !!! | AGTAGCTCACTTAGTTTTTT+TGG | - | chr1_3:65719700-65719719 | None:intergenic | 30.0% |
| AATATACCTCCTAATACAAC+TGG | + | chr1_3:65719766-65719785 | Msa0134210:CDS | 30.0% | |
| GATATAAGACCAGTTGTATT+AGG | - | chr1_3:65719778-65719797 | None:intergenic | 30.0% | |
| TATCCCAAATTTCAATCCAA+TGG | - | chr1_3:65719999-65720018 | None:intergenic | 30.0% | |
| ATAATCAAAGGGACAACAAT+TGG | + | chr1_3:65720117-65720136 | Msa0134210:CDS | 30.0% | |
| GCATGTAACATAGAATTTGA+TGG | + | chr1_3:65720370-65720389 | Msa0134210:three_prime_UTR | 30.0% | |
| GGGAACAAGAGTTGAAAAAT+GGG | - | chr1_3:65717303-65717322 | None:intergenic | 35.0% | |
| TGGGAACAAGAGTTGAAAAA+TGG | - | chr1_3:65717304-65717323 | None:intergenic | 35.0% | |
| ATTGTGAATATGTTGGGAGT+GGG | - | chr1_3:65717492-65717511 | None:intergenic | 35.0% | |
| AATTGTGAATATGTTGGGAG+TGG | - | chr1_3:65717493-65717512 | None:intergenic | 35.0% | |
| ATACATTCAGTGACAGTGAA+TGG | + | chr1_3:65717560-65717579 | Msa0134210:CDS | 35.0% | |
| TACATTCAGTGACAGTGAAT+GGG | + | chr1_3:65717561-65717580 | Msa0134210:CDS | 35.0% | |
| TTAACTGCAAAACACCATGA+TGG | + | chr1_3:65717682-65717701 | Msa0134210:CDS | 35.0% | |
| CGACGGTAAATTTAGAAGAA+TGG | + | chr1_3:65718000-65718019 | Msa0134210:intron | 35.0% | |
| !! | GTTAGGGAAATTTGGTTTGA+TGG | + | chr1_3:65718158-65718177 | Msa0134210:CDS | 35.0% |
| ACCATAGATTTCAGTGTAAG+TGG | - | chr1_3:65718457-65718476 | None:intergenic | 35.0% | |
| TGATTTATGAGACAACGGTT+TGG | - | chr1_3:65718685-65718704 | None:intergenic | 35.0% | |
| CATATGGCTGGAAATAGTTT+AGG | - | chr1_3:65719277-65719296 | None:intergenic | 35.0% | |
| ! | ACTAGTTTGATACACACATG+AGG | - | chr1_3:65719426-65719445 | None:intergenic | 35.0% |
| ATTCATGCTAATCACAATGC+AGG | + | chr1_3:65719578-65719597 | Msa0134210:intron | 35.0% | |
| ATTGAAACATCACATTCTGC+TGG | - | chr1_3:65719643-65719662 | None:intergenic | 35.0% | |
| ATAAGACCAGTTGTATTAGG+AGG | - | chr1_3:65719775-65719794 | None:intergenic | 35.0% | |
| ! | TCACTATCCAACATGTTTTC+TGG | - | chr1_3:65719928-65719947 | None:intergenic | 35.0% |
| ATGATAAGGAAAAGGACCAT+TGG | + | chr1_3:65719980-65719999 | Msa0134210:CDS | 35.0% | |
| AGGACCATTGGATTGAAATT+TGG | + | chr1_3:65719992-65720011 | Msa0134210:CDS | 35.0% | |
| GGACCATTGGATTGAAATTT+GGG | + | chr1_3:65719993-65720012 | Msa0134210:CDS | 35.0% | |
| ATACAAGAAGCAATTGGACT+TGG | + | chr1_3:65720051-65720070 | Msa0134210:CDS | 35.0% | |
| CGAACGGTATGAAATTTATG+TGG | + | chr1_3:65720083-65720102 | Msa0134210:CDS | 35.0% | |
| CGGTATGAAATTTATGTGGA+TGG | + | chr1_3:65720087-65720106 | Msa0134210:CDS | 35.0% | |
| ! | GTGCCTCTTATTTCTTCTAT+TGG | + | chr1_3:65720219-65720238 | Msa0134210:CDS | 35.0% |
| !! | TTGTCTCAAAGTATCGTGAT+TGG | + | chr1_3:65720540-65720559 | Msa0134210:three_prime_UTR | 35.0% |
| !! | GTTTTCTTTTGAGGGTTGAG+GGG | - | chr1_3:65717329-65717348 | None:intergenic | 40.0% |
| !! | GGTTTTCTTTTGAGGGTTGA+GGG | - | chr1_3:65717330-65717349 | None:intergenic | 40.0% |
| !! | TGGTTTTCTTTTGAGGGTTG+AGG | - | chr1_3:65717331-65717350 | None:intergenic | 40.0% |
| !! | AGAATTGGTAATGGTGGACT+TGG | - | chr1_3:65717469-65717488 | None:intergenic | 40.0% |
| ACATTCAGTGACAGTGAATG+GGG | + | chr1_3:65717562-65717581 | Msa0134210:CDS | 40.0% | |
| !!! | ACCATGATGGATTTTGTCTC+TGG | + | chr1_3:65717695-65717714 | Msa0134210:CDS | 40.0% |
| TTGGGATCTATCTTTCACCT+TGG | + | chr1_3:65717824-65717843 | Msa0134210:CDS | 40.0% | |
| TGGGATCTATCTTTCACCTT+GGG | + | chr1_3:65717825-65717844 | Msa0134210:CDS | 40.0% | |
| CTAGAATCATGTCTATCCCA+AGG | - | chr1_3:65717844-65717863 | None:intergenic | 40.0% | |
| TAAGTGCATGTTTGGATCGA+CGG | + | chr1_3:65717983-65718002 | Msa0134210:intron | 40.0% | |
| ! | GCAAAAGCATGCCAAAAAAG+TGG | + | chr1_3:65718415-65718434 | Msa0134210:intron | 40.0% |
| GCCACTTACACTGAAATCTA+TGG | + | chr1_3:65718453-65718472 | Msa0134210:intron | 40.0% | |
| TGATCTCCACTCAGATCAAA+AGG | + | chr1_3:65718551-65718570 | Msa0134210:intron | 40.0% | |
| ! | CTCTTTCCTTTTGATCTGAG+TGG | - | chr1_3:65718560-65718579 | None:intergenic | 40.0% |
| AGAATGCTAAGCTAGATGTG+AGG | + | chr1_3:65718830-65718849 | Msa0134210:intron | 40.0% | |
| AATATGTCGGTCTCATGCTA+AGG | + | chr1_3:65719225-65719244 | Msa0134210:intron | 40.0% | |
| CTCATGCTAAGGTCAAACTT+AGG | + | chr1_3:65719236-65719255 | Msa0134210:intron | 40.0% | |
| TTTCTTCTCACACATATGGC+TGG | - | chr1_3:65719289-65719308 | None:intergenic | 40.0% | |
| TGAACACTGGTGATCCAAAA+GGG | + | chr1_3:65719605-65719624 | Msa0134210:CDS | 40.0% | |
| TGTGATGTTTCAATTCGTCC+AGG | + | chr1_3:65719649-65719668 | Msa0134210:CDS | 40.0% | |
| ATGTTTCAATTCGTCCAGGA+TGG | + | chr1_3:65719653-65719672 | Msa0134210:CDS | 40.0% | |
| GATTTATGCCAAAACCATCC+TGG | - | chr1_3:65719670-65719689 | None:intergenic | 40.0% | |
| GTTAAAGTTAGTAGCCTGAG+AGG | + | chr1_3:65719880-65719899 | Msa0134210:CDS | 40.0% | |
| GTTTGGTCCAGAAAACATGT+TGG | + | chr1_3:65719918-65719937 | Msa0134210:CDS | 40.0% | |
| TGTTGGATAGTGACCATTTG+TGG | + | chr1_3:65719935-65719954 | Msa0134210:CDS | 40.0% | |
| GTGACCATTTGTGGTCATAT+TGG | + | chr1_3:65719944-65719963 | Msa0134210:CDS | 40.0% | |
| TTTCCTTATCATCTTCCCGT+GGG | - | chr1_3:65719972-65719991 | None:intergenic | 40.0% | |
| ! | TTTTCCTTATCATCTTCCCG+TGG | - | chr1_3:65719973-65719992 | None:intergenic | 40.0% |
| ACGGGAAGATGATAAGGAAA+AGG | + | chr1_3:65719972-65719991 | Msa0134210:CDS | 40.0% | |
| ! | GACTTGGTCAAAGAATCGAA+CGG | + | chr1_3:65720067-65720086 | Msa0134210:CDS | 40.0% |
| GGACAACAATTGGTTACAAG+AGG | + | chr1_3:65720127-65720146 | Msa0134210:CDS | 40.0% | |
| TTGGTTACAAGAGGCTTCAT+AGG | + | chr1_3:65720136-65720155 | Msa0134210:CDS | 40.0% | |
| !! | TTGATCCTTTTTGGCACTCA+AGG | + | chr1_3:65720250-65720269 | Msa0134210:CDS | 40.0% |
| GTAAACCTTGAGTGCCAAAA+AGG | - | chr1_3:65720258-65720277 | None:intergenic | 40.0% | |
| !! | TTTTGAGGGTTGAGGGGAAT+GGG | - | chr1_3:65717323-65717342 | None:intergenic | 45.0% |
| AGAACAGCATAGTCTAGCCA+TGG | - | chr1_3:65717383-65717402 | None:intergenic | 45.0% | |
| !! | AGTGGGAGAATTGGTAATGG+TGG | - | chr1_3:65717475-65717494 | None:intergenic | 45.0% |
| TATGTTGGGAGTGGGAGAAT+TGG | - | chr1_3:65717484-65717503 | None:intergenic | 45.0% | |
| TGGGTTGTGTTGAGTCCAAT+TGG | - | chr1_3:65717619-65717638 | None:intergenic | 45.0% | |
| TTGGACTCAACACAACCCAA+TGG | + | chr1_3:65717620-65717639 | Msa0134210:CDS | 45.0% | |
| TGGACTCAACACAACCCAAT+GGG | + | chr1_3:65717621-65717640 | Msa0134210:CDS | 45.0% | |
| GCCAGAGACAAAATCCATCA+TGG | - | chr1_3:65717699-65717718 | None:intergenic | 45.0% | |
| GTCAATGCAGCCACTCATAA+AGG | + | chr1_3:65717793-65717812 | Msa0134210:CDS | 45.0% | |
| TGATGGAGCAAAAGATCCCA+AGG | + | chr1_3:65718175-65718194 | Msa0134210:CDS | 45.0% | |
| ATGCTGGACCTGATGTTAGA+TGG | + | chr1_3:65718276-65718295 | Msa0134210:CDS | 45.0% | |
| TGCTGGACCTGATGTTAGAT+GGG | + | chr1_3:65718277-65718296 | Msa0134210:CDS | 45.0% | |
| CAATGCAGGTATCTGAACAC+TGG | + | chr1_3:65719592-65719611 | Msa0134210:intron | 45.0% | |
| CTGAACACTGGTGATCCAAA+AGG | + | chr1_3:65719604-65719623 | Msa0134210:CDS | 45.0% | |
| GTGATCCAAAAGGGACAGAT+TGG | + | chr1_3:65719614-65719633 | Msa0134210:CDS | 45.0% | |
| ! | CAATTCGTCCAGGATGGTTT+TGG | + | chr1_3:65719659-65719678 | Msa0134210:CDS | 45.0% |
| AAAGTTAGTAGCCTGAGAGG+AGG | + | chr1_3:65719883-65719902 | Msa0134210:CDS | 45.0% | |
| GGGTCCAATATGACCACAAA+TGG | - | chr1_3:65719951-65719970 | None:intergenic | 45.0% | |
| TTCCTTATCATCTTCCCGTG+GGG | - | chr1_3:65719971-65719990 | None:intergenic | 45.0% | |
| AAGAGGCTTCATAGGCTTGA+TGG | + | chr1_3:65720144-65720163 | Msa0134210:CDS | 45.0% | |
| !! | AAGTATAATAAAAATATTAT+AGG | - | chr1_3:65719545-65719564 | None:intergenic | 5.0% |
| !!! | ATATTTTTATTATACTTTTT+AGG | + | chr1_3:65719548-65719567 | Msa0134210:intron | 5.0% |
| !!! | AATAAAAATACTTTTATTTT+TGG | - | chr1_3:65720490-65720509 | None:intergenic | 5.0% |
| !! | CTTTTGAGGGTTGAGGGGAA+TGG | - | chr1_3:65717324-65717343 | None:intergenic | 50.0% |
| GGGAGTGGGAGAATTGGTAA+TGG | - | chr1_3:65717478-65717497 | None:intergenic | 50.0% | |
| TGGACCTGATGTTAGATGGG+TGG | + | chr1_3:65718280-65718299 | Msa0134210:CDS | 50.0% | |
| GGACCTGATGTTAGATGGGT+GGG | + | chr1_3:65718281-65718300 | Msa0134210:CDS | 50.0% | |
| GACCTGATGTTAGATGGGTG+GGG | + | chr1_3:65718282-65718301 | Msa0134210:CDS | 50.0% | |
| ACCTGATGTTAGATGGGTGG+GGG | + | chr1_3:65718283-65718302 | Msa0134210:CDS | 50.0% | |
| ACACATGAGGAACACGCAGA+GGG | - | chr1_3:65719413-65719432 | None:intergenic | 50.0% | |
| ! | GGTAGCCAATCTGTCCCTTT+TGG | - | chr1_3:65719622-65719641 | None:intergenic | 50.0% |
| TAGCCTGAGAGGAGGAAAAG+AGG | + | chr1_3:65719891-65719910 | Msa0134210:CDS | 50.0% | |
| AGCCTGAGAGGAGGAAAAGA+GGG | + | chr1_3:65719892-65719911 | Msa0134210:CDS | 50.0% | |
| TGAGAGGAGGAAAAGAGGGA+GGG | + | chr1_3:65719896-65719915 | Msa0134210:CDS | 50.0% | |
| TGTGGTCATATTGGACCCCA+CGG | + | chr1_3:65719953-65719972 | Msa0134210:CDS | 50.0% | |
| AGTGACAGTGAATGGGGCAC+AGG | + | chr1_3:65717568-65717587 | Msa0134210:CDS | 55.0% | |
| CACAACCCAATGGGCCAATG+TGG | + | chr1_3:65717630-65717649 | Msa0134210:CDS | 55.0% | |
| AGCTGCCACATTGGCCCATT+GGG | - | chr1_3:65717638-65717657 | None:intergenic | 55.0% | |
| TCCTGCTTCAGCTGCCACAT+TGG | - | chr1_3:65717647-65717666 | None:intergenic | 55.0% | |
| TCCCCCACCCATCTAACATC+AGG | - | chr1_3:65718287-65718306 | None:intergenic | 55.0% | |
| AGATGGGTGGGGGATGAAAC+AGG | + | chr1_3:65718293-65718312 | Msa0134210:CDS | 55.0% | |
| GATGGGTGGGGGATGAAACA+GGG | + | chr1_3:65718294-65718313 | Msa0134210:CDS | 55.0% | |
| GGGATGAAACAGGGACTGCA+GGG | + | chr1_3:65718303-65718322 | Msa0134210:CDS | 55.0% | |
| GGATGAAACAGGGACTGCAG+GGG | + | chr1_3:65718304-65718323 | Msa0134210:CDS | 55.0% | |
| CACACATGAGGAACACGCAG+AGG | - | chr1_3:65719414-65719433 | None:intergenic | 55.0% | |
| ! | CTCCCTCTTTTCCTCCTCTC+AGG | - | chr1_3:65719897-65719916 | None:intergenic | 55.0% |
| CTGAGAGGAGGAAAAGAGGG+AGG | + | chr1_3:65719895-65719914 | Msa0134210:CDS | 55.0% | |
| GGAGGAAAAGAGGGAGGGTT+TGG | + | chr1_3:65719901-65719920 | Msa0134210:CDS | 55.0% | |
| GTGGTCATATTGGACCCCAC+GGG | + | chr1_3:65719954-65719973 | Msa0134210:CDS | 55.0% | |
| GACCCCACGGGAAGATGATA+AGG | + | chr1_3:65719966-65719985 | Msa0134210:CDS | 55.0% | |
| CAGCTGCCACATTGGCCCAT+TGG | - | chr1_3:65717639-65717658 | None:intergenic | 60.0% | |
| GCCAATGTGGCAGCTGAAGC+AGG | + | chr1_3:65717643-65717662 | Msa0134210:CDS | 60.0% | |
| GGGGATGAAACAGGGACTGC+AGG | + | chr1_3:65718302-65718321 | Msa0134210:CDS | 60.0% | |
| GGACTGCAGGGGACACGTGT+TGG | + | chr1_3:65718315-65718334 | Msa0134210:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 65717195 | 65720582 | 65717195 | ID=Msa0134210;Name=Msa0134210 |
| chr1_3 | mRNA | 65717195 | 65720582 | 65717195 | ID=Msa0134210-mRNA-1;Parent=Msa0134210;Name=Msa0134210-mRNA-1;_AED=0.13;_eAED=0.13;_QI=187|1|1|1|1|1|3|286|493 |
| chr1_3 | exon | 65717195 | 65717926 | 65717195 | ID=Msa0134210-mRNA-1:exon:22309;Parent=Msa0134210-mRNA-1 |
| chr1_3 | exon | 65718148 | 65718387 | 65718148 | ID=Msa0134210-mRNA-1:exon:22310;Parent=Msa0134210-mRNA-1 |
| chr1_3 | exon | 65719600 | 65720582 | 65719600 | ID=Msa0134210-mRNA-1:exon:22311;Parent=Msa0134210-mRNA-1 |
| chr1_3 | five_prime_UTR | 65717195 | 65717381 | 65717195 | ID=Msa0134210-mRNA-1:five_prime_utr;Parent=Msa0134210-mRNA-1 |
| chr1_3 | CDS | 65717382 | 65717926 | 65717382 | ID=Msa0134210-mRNA-1:cds;Parent=Msa0134210-mRNA-1 |
| chr1_3 | CDS | 65718148 | 65718387 | 65718148 | ID=Msa0134210-mRNA-1:cds;Parent=Msa0134210-mRNA-1 |
| chr1_3 | CDS | 65719600 | 65720296 | 65719600 | ID=Msa0134210-mRNA-1:cds;Parent=Msa0134210-mRNA-1 |
| chr1_3 | three_prime_UTR | 65720297 | 65720582 | 65720297 | ID=Msa0134210-mRNA-1:three_prime_utr;Parent=Msa0134210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
