Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0447370 | XP_003601390.1 | 94.872 | 546 | 7 | 1 | 1 | 546 | 1 | 525 | 0.0 | 1079 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0447370 | sp|O48766|GUN11_ARATH | 72.179 | 514 | 112 | 2 | 22 | 525 | 11 | 503 | 0.0 | 779 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0447370 | G7J6Q9 | 94.872 | 546 | 7 | 1 | 1 | 546 | 1 | 525 | 0.0 | 1079 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007970 | Msa0447370 | 0.826738 | 2.300720e-54 | -8.615850e-47 |
Msa0009760 | Msa0447370 | 0.825956 | 3.532443e-54 | -8.615850e-47 |
Msa0012940 | Msa0447370 | 0.812958 | 3.262431e-51 | -8.615850e-47 |
Msa0016670 | Msa0447370 | 0.826029 | 3.393909e-54 | -8.615850e-47 |
Msa0018000 | Msa0447370 | 0.807724 | 4.395395e-50 | -8.615850e-47 |
Msa0036130 | Msa0447370 | 0.805090 | 1.579062e-49 | -8.615850e-47 |
Msa0039250 | Msa0447370 | 0.838116 | 3.480863e-57 | -8.615850e-47 |
Msa0044020 | Msa0447370 | 0.803747 | 3.007455e-49 | -8.615850e-47 |
Msa0046100 | Msa0447370 | 0.800694 | 1.277898e-48 | -8.615850e-47 |
Msa0049790 | Msa0447370 | 0.804381 | 2.219765e-49 | -8.615850e-47 |
Msa0052870 | Msa0447370 | 0.802513 | 5.413288e-49 | -8.615850e-47 |
Msa0061340 | Msa0447370 | 0.810560 | 1.084919e-50 | -8.615850e-47 |
Msa0069330 | Msa0447370 | 0.829632 | 4.616924e-55 | -8.615850e-47 |
Msa0070680 | Msa0447370 | 0.800825 | 1.201815e-48 | -8.615850e-47 |
Msa0074240 | Msa0447370 | 0.805083 | 1.584463e-49 | -8.615850e-47 |
Msa0081360 | Msa0447370 | 0.810508 | 1.112966e-50 | -8.615850e-47 |
Msa0081480 | Msa0447370 | 0.805582 | 1.244926e-49 | -8.615850e-47 |
Msa0081520 | Msa0447370 | 0.848336 | 6.539604e-60 | -8.615850e-47 |
Msa0093850 | Msa0447370 | 0.820173 | 7.889457e-53 | -8.615850e-47 |
Msa0094850 | Msa0447370 | 0.938415 | 6.987938e-99 | -8.615850e-47 |
Msa0104550 | Msa0447370 | 0.814054 | 1.873082e-51 | -8.615850e-47 |
Msa0110360 | Msa0447370 | 0.806136 | 9.523958e-50 | -8.615850e-47 |
Msa0110970 | Msa0447370 | 0.832540 | 8.916729e-56 | -8.615850e-47 |
Msa0115090 | Msa0447370 | 0.812114 | 4.988610e-51 | -8.615850e-47 |
Msa0115160 | Msa0447370 | 0.821370 | 4.186532e-53 | -8.615850e-47 |
Msa0118570 | Msa0447370 | 0.842619 | 2.314712e-58 | -8.615850e-47 |
Msa0123100 | Msa0447370 | 0.802960 | 4.377057e-49 | -8.615850e-47 |
Msa0124340 | Msa0447370 | 0.806283 | 8.866673e-50 | -8.615850e-47 |
Msa0130240 | Msa0447370 | 0.854674 | 1.051934e-61 | -8.615850e-47 |
Msa0133720 | Msa0447370 | 0.834632 | 2.678547e-56 | -8.615850e-47 |
Msa0133820 | Msa0447370 | 0.820205 | 7.756959e-53 | -8.615850e-47 |
Msa0134180 | Msa0447370 | 0.816594 | 5.102488e-52 | -8.615850e-47 |
Msa0134210 | Msa0447370 | 0.801634 | 8.207795e-49 | -8.615850e-47 |
Msa0134610 | Msa0447370 | 0.822954 | 1.797006e-53 | -8.615850e-47 |
Msa0136650 | Msa0447370 | 0.816302 | 5.931414e-52 | -8.615850e-47 |
Msa0138360 | Msa0447370 | 0.818880 | 1.556285e-52 | -8.615850e-47 |
Msa0142950 | Msa0447370 | 0.817425 | 3.320495e-52 | -8.615850e-47 |
Msa0144360 | Msa0447370 | 0.836852 | 7.338782e-57 | -8.615850e-47 |
Msa0146260 | Msa0447370 | 0.821344 | 4.243557e-53 | -8.615850e-47 |
Msa0146280 | Msa0447370 | 0.803778 | 2.963510e-49 | -8.615850e-47 |
Msa0147980 | Msa0447370 | 0.808072 | 3.706601e-50 | -8.615850e-47 |
Msa0150570 | Msa0447370 | 0.816425 | 5.567081e-52 | -8.615850e-47 |
Msa0152400 | Msa0447370 | 0.833358 | 5.583248e-56 | -8.615850e-47 |
Msa0160830 | Msa0447370 | 0.809606 | 1.740990e-50 | -8.615850e-47 |
Msa0173890 | Msa0447370 | 0.851753 | 7.224866e-61 | -8.615850e-47 |
Msa0174450 | Msa0447370 | 0.801195 | 1.009505e-48 | -8.615850e-47 |
Msa0181230 | Msa0447370 | 0.800030 | 1.745180e-48 | -8.615850e-47 |
Msa0186890 | Msa0447370 | 0.803580 | 3.256782e-49 | -8.615850e-47 |
Msa0195630 | Msa0447370 | 0.809742 | 1.628293e-50 | -8.615850e-47 |
Msa0199520 | Msa0447370 | 0.806067 | 9.849637e-50 | -8.615850e-47 |
Msa0205840 | Msa0447370 | 0.803390 | 3.566802e-49 | -8.615850e-47 |
Msa0206840 | Msa0447370 | 0.848750 | 5.022159e-60 | -8.615850e-47 |
Msa0221000 | Msa0447370 | 0.804455 | 2.142638e-49 | -8.615850e-47 |
Msa0225680 | Msa0447370 | 0.808358 | 3.221595e-50 | -8.615850e-47 |
Msa0233730 | Msa0447370 | 0.806103 | 9.678129e-50 | -8.615850e-47 |
Msa0369850 | Msa0447370 | 0.824455 | 7.996916e-54 | -8.615850e-47 |
Msa0378720 | Msa0447370 | 0.827010 | 1.980799e-54 | -8.615850e-47 |
Msa0380620 | Msa0447370 | 0.804091 | 2.551405e-49 | -8.615850e-47 |
Msa0403850 | Msa0447370 | 0.804614 | 1.985136e-49 | -8.615850e-47 |
Msa0410500 | Msa0447370 | 0.850395 | 1.745851e-60 | -8.615850e-47 |
Msa0410650 | Msa0447370 | 0.811001 | 8.709817e-51 | -8.615850e-47 |
Msa0413450 | Msa0447370 | 0.808155 | 3.558623e-50 | -8.615850e-47 |
Msa0417880 | Msa0447370 | 0.827294 | 1.693674e-54 | -8.615850e-47 |
Msa0422850 | Msa0447370 | 0.836104 | 1.138056e-56 | -8.615850e-47 |
Msa0422930 | Msa0447370 | 0.833863 | 4.176223e-56 | -8.615850e-47 |
Msa0423900 | Msa0447370 | 0.809077 | 2.261228e-50 | -8.615850e-47 |
Msa0430260 | Msa0447370 | 0.826771 | 2.259012e-54 | -8.615850e-47 |
Msa0432380 | Msa0447370 | 0.821547 | 3.810909e-53 | -8.615850e-47 |
Msa0447370 | Msa0450440 | 0.819982 | 8.726598e-53 | -8.615850e-47 |
Msa0447370 | Msa0450720 | 0.802013 | 6.861634e-49 | -8.615850e-47 |
Msa0447370 | Msa0452960 | 0.802973 | 4.349916e-49 | -8.615850e-47 |
Msa0447370 | Msa0461720 | 0.801166 | 1.023431e-48 | -8.615850e-47 |
Msa0447370 | Msa0467430 | 0.838470 | 2.821387e-57 | -8.615850e-47 |
Msa0447370 | Msa0474730 | 0.818988 | 1.470127e-52 | -8.615850e-47 |
Msa0447370 | Msa0474950 | 0.800234 | 1.585796e-48 | -8.615850e-47 |
Msa0447370 | Msa0475790 | 0.838049 | 3.621891e-57 | -8.615850e-47 |
Msa0447370 | Msa0479170 | 0.818662 | 1.744082e-52 | -8.615850e-47 |
Msa0447370 | Msa0479200 | 0.844600 | 6.836802e-59 | -8.615850e-47 |
Msa0447370 | Msa0481460 | 0.824043 | 9.996025e-54 | -8.615850e-47 |
Msa0447370 | Msa0488790 | 0.814371 | 1.594219e-51 | -8.615850e-47 |
Msa0447370 | Msa0495320 | 0.815015 | 1.147908e-51 | -8.615850e-47 |
Msa0447370 | Msa0498060 | 0.818456 | 1.942280e-52 | -8.615850e-47 |
Msa0447370 | Msa0500380 | 0.812857 | 3.433426e-51 | -8.615850e-47 |
Msa0447370 | Msa0507680 | 0.810416 | 1.165199e-50 | -8.615850e-47 |
Msa0447370 | Msa0509610 | 0.809400 | 1.928223e-50 | -8.615850e-47 |
Msa0447370 | Msa0513160 | 0.954242 | 4.594481e-112 | -8.615850e-47 |
Msa0447370 | Msa0518030 | 0.806034 | 1.000657e-49 | -8.615850e-47 |
Msa0447370 | Msa0518690 | 0.805010 | 1.641201e-49 | -8.615850e-47 |
Msa0447370 | Msa0527190 | 0.818882 | 1.554199e-52 | -8.615850e-47 |
Msa0447370 | Msa0527550 | 0.810110 | 1.356343e-50 | -8.615850e-47 |
Msa0447370 | Msa0527860 | 0.830282 | 3.206944e-55 | -8.615850e-47 |
Msa0447370 | Msa0541860 | 0.801593 | 8.368535e-49 | -8.615850e-47 |
Msa0447370 | Msa0545340 | 0.815940 | 7.145766e-52 | -8.615850e-47 |
Msa0447370 | Msa0547020 | 0.823513 | 1.330361e-53 | -8.615850e-47 |
Msa0447370 | Msa0556010 | 0.815553 | 8.713494e-52 | -8.615850e-47 |
Msa0447370 | Msa0573380 | 0.839171 | 1.858341e-57 | -8.615850e-47 |
Msa0447370 | Msa0574890 | 0.826574 | 2.517459e-54 | -8.615850e-47 |
Msa0447370 | Msa0576680 | 0.809586 | 1.758959e-50 | -8.615850e-47 |
Msa0447370 | Msa0581690 | 0.802422 | 5.652856e-49 | -8.615850e-47 |
Msa0447370 | Msa0582450 | 0.814378 | 1.588261e-51 | -8.615850e-47 |
Msa0447370 | Msa0586190 | 0.818756 | 1.660462e-52 | -8.615850e-47 |
Msa0447370 | Msa0587940 | 0.826365 | 2.823779e-54 | -8.615850e-47 |
Msa0447370 | Msa0594310 | 0.800981 | 1.116665e-48 | -8.615850e-47 |
Msa0447370 | Msa0600930 | 0.831988 | 1.221350e-55 | -8.615850e-47 |
Msa0447370 | Msa0614000 | 0.811302 | 7.493312e-51 | -8.615850e-47 |
Msa0447370 | Msa0620230 | 0.809436 | 1.894329e-50 | -8.615850e-47 |
Msa0447370 | Msa0620990 | 0.810553 | 1.088396e-50 | -8.615850e-47 |
Msa0447370 | Msa0623330 | 0.827424 | 1.576598e-54 | -8.615850e-47 |
Msa0447370 | Msa0625630 | 0.807259 | 5.517089e-50 | -8.615850e-47 |
Msa0447370 | Msa0626450 | 0.841397 | 4.870704e-58 | -8.615850e-47 |
Msa0447370 | Msa0626490 | 0.842660 | 2.258172e-58 | -8.615850e-47 |
Msa0447370 | Msa0626510 | 0.817225 | 3.683120e-52 | -8.615850e-47 |
Msa0447370 | Msa0628890 | 0.806972 | 6.344850e-50 | -8.615850e-47 |
Msa0447370 | Msa0637560 | 0.807083 | 6.011019e-50 | -8.615850e-47 |
Msa0447370 | Msa0637580 | 0.803354 | 3.629059e-49 | -8.615850e-47 |
Msa0447370 | Msa0638480 | 0.853879 | 1.784699e-61 | -8.615850e-47 |
Msa0447370 | Msa0642720 | 0.801381 | 9.251449e-49 | -8.615850e-47 |
Msa0447370 | Msa0642880 | 0.830693 | 2.544242e-55 | -8.615850e-47 |
Msa0447370 | Msa0643300 | 0.815799 | 7.682863e-52 | -8.615850e-47 |
Msa0447370 | Msa0663300 | 0.815892 | 7.324163e-52 | -8.615850e-47 |
Msa0447370 | Msa0664060 | 0.807794 | 4.247863e-50 | -8.615850e-47 |
Msa0447370 | Msa0664600 | 0.841751 | 3.929576e-58 | -8.615850e-47 |
Msa0447370 | Msa0664910 | 0.819542 | 1.099905e-52 | -8.615850e-47 |
Msa0447370 | Msa0679870 | 0.805034 | 1.621901e-49 | -8.615850e-47 |
Msa0447370 | Msa0683570 | 0.835302 | 1.816504e-56 | -8.615850e-47 |
Msa0447370 | Msa0684500 | 0.807462 | 4.994640e-50 | -8.615850e-47 |
Msa0447370 | Msa0702340 | 0.856897 | 2.357157e-62 | -8.615850e-47 |
Msa0447370 | Msa0702590 | 0.861339 | 1.100125e-63 | -8.615850e-47 |
Msa0447370 | Msa0702660 | 0.858211 | 9.625000e-63 | -8.615850e-47 |
Msa0447370 | Msa0716410 | 0.828841 | 7.182844e-55 | -8.615850e-47 |
Msa0447370 | Msa0724910 | 0.807405 | 5.136337e-50 | -8.615850e-47 |
Msa0447370 | Msa0737570 | 0.800497 | 1.401983e-48 | -8.615850e-47 |
Msa0447370 | Msa0738040 | 0.828646 | 8.007441e-55 | -8.615850e-47 |
Msa0447370 | Msa0741900 | 0.800379 | 1.481750e-48 | -8.615850e-47 |
Msa0447370 | Msa0742740 | 0.834036 | 3.779247e-56 | -8.615850e-47 |
Msa0447370 | Msa0743800 | 0.800828 | 1.200294e-48 | -8.615850e-47 |
Msa0447370 | Msa0754520 | 0.811821 | 5.778546e-51 | -8.615850e-47 |
Msa0447370 | Msa0765240 | 0.801660 | 8.107241e-49 | -8.615850e-47 |
Msa0447370 | Msa0768990 | 0.817082 | 3.964455e-52 | -8.615850e-47 |
Msa0447370 | Msa0788770 | 0.840850 | 6.780525e-58 | -8.615850e-47 |
Msa0447370 | Msa0796160 | 0.800884 | 1.168900e-48 | -8.615850e-47 |
Msa0447370 | Msa0799000 | 0.810502 | 1.116496e-50 | -8.615850e-47 |
Msa0447370 | Msa0815630 | 0.801387 | 9.222324e-49 | -8.615850e-47 |
Msa0447370 | Msa0819420 | 0.805749 | 1.148457e-49 | -8.615850e-47 |
Msa0447370 | Msa0823820 | 0.841221 | 5.418745e-58 | -8.615850e-47 |
Msa0447370 | Msa0828560 | 0.817319 | 3.506571e-52 | -8.615850e-47 |
Msa0447370 | Msa0833220 | 0.818194 | 2.225954e-52 | -8.615850e-47 |
Msa0447370 | Msa0856050 | 0.835072 | 2.076210e-56 | -8.615850e-47 |
Msa0447370 | Msa0856920 | 0.803986 | 2.683097e-49 | -8.615850e-47 |
Msa0447370 | Msa0861510 | 0.854489 | 1.189822e-61 | -8.615850e-47 |
Msa0447370 | Msa0861530 | 0.845986 | 2.883441e-59 | -8.615850e-47 |
Msa0447370 | Msa0861600 | 0.850216 | 1.960372e-60 | -8.615850e-47 |
Msa0447370 | Msa0863010 | 0.835320 | 1.797670e-56 | -8.615850e-47 |
Msa0447370 | Msa0930780 | 0.847975 | 8.227486e-60 | -8.615850e-47 |
Msa0447370 | Msa0940460 | 0.801604 | 8.324042e-49 | -8.615850e-47 |
Msa0447370 | Msa0961690 | 0.802795 | 4.734411e-49 | -8.615850e-47 |
Msa0447370 | Msa1003030 | 0.803949 | 2.730895e-49 | -8.615850e-47 |
Msa0447370 | Msa1004420 | 0.823288 | 1.501160e-53 | -8.615850e-47 |
Msa0447370 | Msa1005820 | 0.817469 | 3.245759e-52 | -8.615850e-47 |
Msa0447370 | Msa1005870 | 0.811029 | 8.588245e-51 | -8.615850e-47 |
Msa0447370 | Msa1020510 | 0.804326 | 2.279100e-49 | -8.615850e-47 |
Msa0447370 | Msa1031930 | 0.830399 | 3.001227e-55 | -8.615850e-47 |
Msa0447370 | Msa1037920 | 0.800715 | 1.265565e-48 | -8.615850e-47 |
Msa0447370 | Msa1043370 | 0.804250 | 2.364268e-49 | -8.615850e-47 |
Msa0447370 | Msa1048920 | 0.833293 | 5.795804e-56 | -8.615850e-47 |
Msa0447370 | Msa1050910 | 0.844805 | 6.020046e-59 | -8.615850e-47 |
Msa0447370 | Msa1050960 | 0.809122 | 2.212024e-50 | -8.615850e-47 |
Msa0447370 | Msa1051600 | 0.812769 | 3.587682e-51 | -8.615850e-47 |
Msa0447370 | Msa1059960 | 0.817862 | 2.646130e-52 | -8.615850e-47 |
Msa0447370 | Msa1063950 | 0.824972 | 6.042047e-54 | -8.615850e-47 |
Msa0447370 | Msa1071770 | 0.827243 | 1.742318e-54 | -8.615850e-47 |
Msa0447370 | Msa1085200 | 0.802981 | 4.334546e-49 | -8.615850e-47 |
Msa0447370 | Msa1091520 | 0.800123 | 1.670423e-48 | -8.615850e-47 |
Msa0447370 | Msa1092010 | 0.812945 | 3.284199e-51 | -8.615850e-47 |
Msa0447370 | Msa1097640 | 0.813682 | 2.261663e-51 | -8.615850e-47 |
Msa0447370 | Msa1100890 | 0.803781 | 2.959331e-49 | -8.615850e-47 |
Msa0447370 | Msa1102770 | 0.817705 | 2.871555e-52 | -8.615850e-47 |
Msa0447370 | Msa1105160 | 0.802510 | 5.420529e-49 | -8.615850e-47 |
Msa0447370 | Msa1124110 | 0.824741 | 6.847773e-54 | -8.615850e-47 |
Msa0447370 | Msa1125940 | 0.820500 | 6.639066e-53 | -8.615850e-47 |
Msa0447370 | Msa1127890 | 0.812424 | 4.268578e-51 | -8.615850e-47 |
Msa0447370 | Msa1135270 | 0.814665 | 1.372374e-51 | -8.615850e-47 |
Msa0447370 | Msa1139810 | 0.803894 | 2.803371e-49 | -8.615850e-47 |
Msa0447370 | Msa1151910 | 0.824829 | 6.527621e-54 | -8.615850e-47 |
Msa0447370 | Msa1157870 | 0.831837 | 1.330807e-55 | -8.615850e-47 |
Msa0447370 | Msa1158830 | 0.821702 | 3.507584e-53 | -8.615850e-47 |
Msa0447370 | Msa1160500 | 0.800079 | 1.705603e-48 | -8.615850e-47 |
Msa0447370 | Msa1165740 | 0.809572 | 1.771268e-50 | -8.615850e-47 |
Msa0447370 | Msa1166400 | 0.800979 | 1.117509e-48 | -8.615850e-47 |
Msa0447370 | Msa1168950 | 0.816964 | 4.214044e-52 | -8.615850e-47 |
Msa0447370 | Msa1169040 | 0.822993 | 1.759731e-53 | -8.615850e-47 |
Msa0447370 | Msa1172640 | 0.821567 | 3.770230e-53 | -8.615850e-47 |
Msa0447370 | Msa1173330 | 0.827181 | 1.802375e-54 | -8.615850e-47 |
Msa0447370 | Msa1174530 | 0.867115 | 1.735327e-65 | -8.615850e-47 |
Msa0447370 | Msa1179940 | 0.825191 | 5.362996e-54 | -8.615850e-47 |
Msa0447370 | Msa1179970 | 0.815965 | 7.054643e-52 | -8.615850e-47 |
Msa0447370 | Msa1182770 | 0.817972 | 2.498219e-52 | -8.615850e-47 |
Msa0447370 | Msa1184330 | 0.812875 | 3.402116e-51 | -8.615850e-47 |
Msa0447370 | Msa1199570 | 0.802648 | 5.078781e-49 | -8.615850e-47 |
Msa0447370 | Msa1202190 | 0.811373 | 7.231826e-51 | -8.615850e-47 |
Msa0447370 | Msa1208160 | 0.829612 | 4.669861e-55 | -8.615850e-47 |
Msa0447370 | Msa1208430 | 0.804397 | 2.202952e-49 | -8.615850e-47 |
Msa0447370 | Msa1224830 | 0.801176 | 1.018690e-48 | -8.615850e-47 |
Msa0447370 | Msa1224840 | 0.860049 | 2.707534e-63 | -8.615850e-47 |
Msa0447370 | Msa1225250 | 0.814681 | 1.361271e-51 | -8.615850e-47 |
Msa0447370 | Msa1227940 | 0.801352 | 9.377788e-49 | -8.615850e-47 |
Msa0447370 | Msa1232710 | 0.828846 | 7.162352e-55 | -8.615850e-47 |
Msa0447370 | Msa1235250 | 0.855391 | 6.509540e-62 | -8.615850e-47 |
Msa0447370 | Msa1236100 | 0.826535 | 2.571544e-54 | -8.615850e-47 |
Msa0447370 | Msa1252190 | 0.828409 | 9.133847e-55 | -8.615850e-47 |
Msa0447370 | Msa1264710 | 0.813603 | 2.354974e-51 | -8.615850e-47 |
Msa0447370 | Msa1271990 | 0.805599 | 1.235045e-49 | -8.615850e-47 |
Msa0447370 | Msa1274060 | 0.800497 | 1.401983e-48 | -8.615850e-47 |
Msa0447370 | Msa1276660 | 0.843825 | 1.104226e-58 | -8.615850e-47 |
Msa0447370 | Msa1277490 | 0.809917 | 1.493122e-50 | -8.615850e-47 |
Msa0447370 | Msa1282500 | 0.807035 | 6.152771e-50 | -8.615850e-47 |
Msa0447370 | Msa1292830 | 0.824372 | 8.365757e-54 | -8.615850e-47 |
Msa0447370 | Msa1298370 | 0.828309 | 9.658397e-55 | -8.615850e-47 |
Msa0447370 | Msa1307570 | 0.819112 | 1.378277e-52 | -8.615850e-47 |
Msa0447370 | Msa1313300 | 0.835670 | 1.465881e-56 | -8.615850e-47 |
Msa0447370 | Msa1328640 | 0.803750 | 3.003539e-49 | -8.615850e-47 |
Msa0447370 | Msa1328710 | 0.801188 | 1.013169e-48 | -8.615850e-47 |
Msa0447370 | Msa1333560 | 0.802211 | 6.247673e-49 | -8.615850e-47 |
Msa0447370 | Msa1337600 | 0.838694 | 2.470409e-57 | -8.615850e-47 |
Msa0447370 | Msa1348090 | 0.809442 | 1.888339e-50 | -8.615850e-47 |
Msa0447370 | Msa1356830 | 0.840859 | 6.746476e-58 | -8.615850e-47 |
Msa0447370 | Msa1369150 | 0.839355 | 1.664753e-57 | -8.615850e-47 |
Msa0447370 | Msa1371520 | 0.817421 | 3.326883e-52 | -8.615850e-47 |
Msa0447370 | Msa1373330 | 0.803804 | 2.927218e-49 | -8.615850e-47 |
Msa0447370 | Msa1374040 | 0.827133 | 1.851420e-54 | -8.615850e-47 |
Msa0447370 | Msa1374060 | 0.801093 | 1.059326e-48 | -8.615850e-47 |
Msa0447370 | Msa1422580 | 0.809701 | 1.661374e-50 | -8.615850e-47 |
Msa0447370 | Msa1437460 | 0.808445 | 3.086588e-50 | -8.615850e-47 |
Msa0447370 | Msa1437940 | 0.839900 | 1.201796e-57 | -8.615850e-47 |
Msa0447370 | Msa1439610 | 0.829818 | 4.160215e-55 | -8.615850e-47 |
Msa0447370 | Msa1440960 | 0.830687 | 2.552282e-55 | -8.615850e-47 |
Msa0447370 | Msa1443930 | 0.852569 | 4.236308e-61 | -8.615850e-47 |
Msa0447370 | Msa1445190 | 0.952178 | 4.234241e-110 | -8.615850e-47 |
Msa0447370 | Msa1459180 | 0.807490 | 4.927319e-50 | -8.615850e-47 |
Msa0447370 | Msa1459380 | 0.813376 | 2.641631e-51 | -8.615850e-47 |
Msa0447370 | Msa1459460 | 0.811285 | 7.556440e-51 | -8.615850e-47 |
Msa0447370 | Msa1460020 | 0.802673 | 5.017307e-49 | -8.615850e-47 |
Msa0248970 | Msa0447370 | 0.809323 | 2.002712e-50 | -8.615850e-47 |
Msa0249540 | Msa0447370 | 0.848827 | 4.782135e-60 | -8.615850e-47 |
Msa0251050 | Msa0447370 | 0.813841 | 2.086744e-51 | -8.615850e-47 |
Msa0261340 | Msa0447370 | 0.804100 | 2.540264e-49 | -8.615850e-47 |
Msa0263080 | Msa0447370 | 0.812458 | 4.197485e-51 | -8.615850e-47 |
Msa0265850 | Msa0447370 | 0.812030 | 5.204343e-51 | -8.615850e-47 |
Msa0274680 | Msa0447370 | 0.826236 | 3.031242e-54 | -8.615850e-47 |
Msa0292400 | Msa0447370 | 0.815915 | 7.236148e-52 | -8.615850e-47 |
Msa0299890 | Msa0447370 | 0.806039 | 9.980700e-50 | -8.615850e-47 |
Msa0300270 | Msa0447370 | 0.837026 | 6.624585e-57 | -8.615850e-47 |
Msa0300320 | Msa0447370 | 0.840113 | 1.057153e-57 | -8.615850e-47 |
Msa0300690 | Msa0447370 | 0.820715 | 5.924676e-53 | -8.615850e-47 |
Msa0326590 | Msa0447370 | 0.827695 | 1.357329e-54 | -8.615850e-47 |
Msa0333920 | Msa0447370 | 0.811593 | 6.479459e-51 | -8.615850e-47 |
Msa0334040 | Msa0447370 | 0.826864 | 2.147062e-54 | -8.615850e-47 |
Msa0341690 | Msa0447370 | 0.821962 | 3.054286e-53 | -8.615850e-47 |
Msa0345330 | Msa0447370 | 0.834108 | 3.625550e-56 | -8.615850e-47 |
Msa0345410 | Msa0447370 | 0.821892 | 3.170992e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0447370 | MtrunA17_Chr3g0119371 | 94.872 | 546 | 7 | 1 | 1 | 546 | 1 | 525 | 0.0 | 1079 |
Msa0447370 | MtrunA17_Chr5g0439311 | 78.748 | 527 | 89 | 3 | 21 | 546 | 12 | 516 | 0.0 | 874 |
Msa0447370 | MtrunA17_Chr8g0388051 | 59.138 | 487 | 176 | 2 | 40 | 526 | 28 | 491 | 0.0 | 618 |
Msa0447370 | MtrunA17_Chr4g0038131 | 58.282 | 489 | 180 | 4 | 39 | 526 | 27 | 492 | 0.0 | 587 |
Msa0447370 | MtrunA17_Chr5g0444721 | 66.146 | 384 | 108 | 2 | 144 | 526 | 202 | 564 | 0.0 | 528 |
Msa0447370 | MtrunA17_Chr5g0444721 | 62.428 | 173 | 60 | 2 | 22 | 190 | 16 | 187 | 3.71e-64 | 219 |
Msa0447370 | MtrunA17_Chr1g0164201 | 49.109 | 505 | 224 | 7 | 23 | 524 | 5 | 479 | 1.59e-164 | 476 |
Msa0447370 | MtrunA17_Chr1g0195271 | 47.162 | 511 | 227 | 7 | 15 | 524 | 26 | 494 | 9.47e-152 | 444 |
Msa0447370 | MtrunA17_Chr5g0397201 | 46.894 | 499 | 225 | 7 | 36 | 531 | 36 | 497 | 2.74e-150 | 441 |
Msa0447370 | MtrunA17_Chr8g0391391 | 47.251 | 491 | 225 | 8 | 40 | 526 | 30 | 490 | 5.59e-150 | 439 |
Msa0447370 | MtrunA17_Chr3g0119821 | 47.239 | 489 | 226 | 8 | 40 | 526 | 35 | 493 | 3.91e-149 | 437 |
Msa0447370 | MtrunA17_Chr3g0145261 | 46.436 | 491 | 231 | 6 | 40 | 527 | 24 | 485 | 1.05e-147 | 433 |
Msa0447370 | MtrunA17_Chr4g0018301 | 43.086 | 499 | 248 | 7 | 31 | 528 | 36 | 499 | 1.09e-139 | 413 |
Msa0447370 | MtrunA17_Chr3g0086311 | 44.380 | 516 | 242 | 7 | 23 | 530 | 5 | 483 | 2.27e-139 | 412 |
Msa0447370 | MtrunA17_Chr3g0080171 | 45.194 | 489 | 233 | 7 | 40 | 526 | 25 | 480 | 1.62e-137 | 407 |
Msa0447370 | MtrunA17_Chr4g0018361 | 44.015 | 518 | 239 | 11 | 25 | 526 | 7 | 489 | 7.04e-135 | 400 |
Msa0447370 | MtrunA17_Chr3g0142501 | 42.127 | 489 | 254 | 9 | 41 | 527 | 58 | 519 | 8.47e-124 | 374 |
Msa0447370 | MtrunA17_Chr8g0372031 | 42.387 | 486 | 251 | 11 | 41 | 524 | 64 | 522 | 3.37e-118 | 359 |
Msa0447370 | MtrunA17_Chr5g0397181 | 43.488 | 430 | 203 | 7 | 101 | 527 | 1 | 393 | 2.96e-117 | 352 |
Msa0447370 | MtrunA17_Chr3g0136381 | 44.784 | 393 | 181 | 5 | 31 | 423 | 21 | 377 | 1.68e-109 | 333 |
Msa0447370 | MtrunA17_Chr2g0291461 | 41.055 | 531 | 251 | 17 | 40 | 544 | 111 | 605 | 1.19e-101 | 319 |
Msa0447370 | MtrunA17_Chr3g0120661 | 38.142 | 506 | 258 | 16 | 40 | 523 | 116 | 588 | 7.80e-92 | 294 |
Msa0447370 | MtrunA17_Chr3g0126111 | 35.420 | 559 | 277 | 18 | 19 | 531 | 68 | 588 | 4.03e-90 | 288 |
Msa0447370 | MtrunA17_Chr4g0018341 | 38.065 | 310 | 158 | 6 | 220 | 528 | 2 | 278 | 2.12e-65 | 214 |
Msa0447370 | MtrunA17_Chr4g0018351 | 54.348 | 184 | 82 | 1 | 38 | 221 | 28 | 209 | 1.26e-62 | 204 |
Msa0447370 | MtrunA17_Chr1g0164181 | 52.973 | 185 | 86 | 1 | 82 | 266 | 3 | 186 | 1.23e-52 | 182 |
Msa0447370 | MtrunA17_Chr1g0164181 | 47.826 | 161 | 83 | 1 | 364 | 524 | 170 | 329 | 1.16e-47 | 169 |
Msa0447370 | MtrunA17_Chr7g0269571 | 44.578 | 166 | 80 | 2 | 370 | 524 | 43 | 207 | 1.15e-42 | 152 |
Msa0447370 | MtrunA17_Chr4g0022271 | 43.571 | 140 | 74 | 1 | 370 | 509 | 20 | 154 | 5.13e-34 | 127 |
Msa0447370 | MtrunA17_Chr4g0072811 | 41.216 | 148 | 82 | 4 | 377 | 523 | 19 | 162 | 2.01e-28 | 112 |
Msa0447370 | MtrunA17_Chr3g0136371 | 46.739 | 92 | 48 | 1 | 423 | 514 | 1 | 91 | 3.57e-23 | 94.4 |
Msa0447370 | MtrunA17_Chr5g0397171 | 59.524 | 42 | 17 | 0 | 39 | 80 | 40 | 81 | 1.19e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0447370 | AT2G32990.1 | 72.179 | 514 | 112 | 2 | 22 | 525 | 11 | 503 | 0.0 | 779 |
Msa0447370 | AT1G64390.1 | 59.754 | 487 | 173 | 2 | 40 | 526 | 25 | 488 | 0.0 | 611 |
Msa0447370 | AT4G11050.1 | 58.811 | 488 | 178 | 2 | 40 | 527 | 26 | 490 | 0.0 | 602 |
Msa0447370 | AT4G11050.3 | 58.811 | 488 | 178 | 2 | 40 | 527 | 26 | 490 | 0.0 | 602 |
Msa0447370 | AT4G11050.2 | 58.811 | 488 | 178 | 2 | 40 | 527 | 26 | 490 | 0.0 | 599 |
Msa0447370 | AT1G48930.1 | 56.057 | 487 | 191 | 3 | 39 | 525 | 29 | 492 | 0.0 | 539 |
Msa0447370 | AT2G44550.1 | 49.400 | 500 | 223 | 5 | 25 | 524 | 18 | 487 | 9.23e-164 | 474 |
Msa0447370 | AT2G44540.1 | 48.708 | 503 | 227 | 6 | 22 | 524 | 17 | 488 | 4.18e-159 | 463 |
Msa0447370 | AT2G44560.1 | 49.301 | 501 | 224 | 6 | 24 | 524 | 18 | 488 | 3.68e-157 | 458 |
Msa0447370 | AT2G44570.1 | 46.614 | 502 | 238 | 6 | 24 | 524 | 17 | 489 | 9.18e-156 | 454 |
Msa0447370 | AT4G02290.1 | 48.361 | 488 | 221 | 7 | 40 | 526 | 52 | 509 | 1.46e-150 | 442 |
Msa0447370 | AT1G02800.1 | 48.971 | 486 | 215 | 6 | 40 | 524 | 43 | 496 | 6.57e-150 | 440 |
Msa0447370 | AT1G70710.1 | 45.635 | 504 | 243 | 6 | 24 | 526 | 12 | 485 | 9.36e-149 | 436 |
Msa0447370 | AT4G39010.1 | 45.621 | 491 | 234 | 8 | 40 | 526 | 29 | 490 | 1.95e-145 | 428 |
Msa0447370 | AT1G23210.1 | 46.311 | 488 | 231 | 7 | 40 | 526 | 28 | 485 | 1.04e-143 | 423 |
Msa0447370 | AT4G23560.1 | 45.759 | 507 | 234 | 8 | 24 | 527 | 7 | 475 | 2.79e-143 | 422 |
Msa0447370 | AT4G09740.1 | 45.365 | 507 | 236 | 7 | 24 | 527 | 7 | 475 | 3.38e-143 | 422 |
Msa0447370 | AT3G43860.2 | 44.422 | 502 | 241 | 8 | 26 | 526 | 19 | 483 | 7.40e-138 | 408 |
Msa0447370 | AT3G43860.1 | 44.422 | 502 | 241 | 8 | 26 | 526 | 19 | 483 | 7.40e-138 | 408 |
Msa0447370 | AT1G22880.1 | 44.950 | 505 | 242 | 9 | 24 | 526 | 8 | 478 | 2.81e-137 | 407 |
Msa0447370 | AT1G71380.1 | 44.291 | 508 | 244 | 10 | 24 | 526 | 5 | 478 | 1.13e-135 | 403 |
Msa0447370 | AT1G19940.2 | 45.756 | 483 | 231 | 8 | 40 | 521 | 48 | 500 | 3.15e-134 | 400 |
Msa0447370 | AT1G19940.1 | 45.756 | 483 | 231 | 8 | 40 | 521 | 48 | 500 | 3.15e-134 | 400 |
Msa0447370 | AT4G39000.1 | 43.952 | 496 | 245 | 7 | 40 | 531 | 25 | 491 | 8.20e-134 | 398 |
Msa0447370 | AT1G75680.1 | 45.607 | 478 | 229 | 8 | 41 | 517 | 58 | 505 | 2.31e-129 | 388 |
Msa0447370 | AT4G38990.2 | 41.879 | 511 | 259 | 9 | 25 | 526 | 8 | 489 | 1.51e-124 | 374 |
Msa0447370 | AT4G02290.2 | 45.667 | 427 | 201 | 7 | 101 | 526 | 1 | 397 | 2.57e-117 | 353 |
Msa0447370 | AT2G44570.2 | 43.510 | 416 | 205 | 6 | 24 | 438 | 17 | 403 | 1.44e-110 | 335 |
Msa0447370 | AT1G22880.2 | 42.991 | 428 | 208 | 9 | 101 | 526 | 1 | 394 | 4.43e-109 | 332 |
Msa0447370 | AT4G39010.2 | 44.444 | 387 | 183 | 7 | 40 | 422 | 29 | 387 | 1.35e-107 | 327 |
Msa0447370 | AT1G19940.3 | 43.636 | 385 | 191 | 6 | 40 | 423 | 48 | 407 | 7.34e-96 | 298 |
Msa0447370 | AT5G49720.1 | 41.569 | 510 | 238 | 18 | 40 | 523 | 108 | 583 | 6.62e-95 | 302 |
Msa0447370 | AT4G24260.1 | 39.764 | 508 | 250 | 15 | 40 | 523 | 108 | 583 | 2.41e-85 | 277 |
Msa0447370 | AT1G65610.1 | 34.690 | 516 | 283 | 16 | 40 | 534 | 116 | 598 | 5.39e-84 | 273 |
Msa0447370 | AT4G38990.1 | 40.633 | 379 | 174 | 6 | 25 | 402 | 8 | 336 | 1.18e-80 | 256 |
Msa0447370 | AT1G22880.3 | 45.559 | 349 | 155 | 8 | 24 | 370 | 8 | 323 | 2.36e-79 | 253 |
Msa0447370 | AT4G24260.3 | 37.745 | 408 | 203 | 13 | 40 | 423 | 108 | 488 | 2.34e-53 | 189 |
Msa0447370 | AT4G24260.2 | 39.316 | 351 | 162 | 11 | 40 | 363 | 108 | 434 | 2.34e-51 | 182 |
Find 127 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTCACAAGTTGATTACATTT+TGG | 0.156175 | 3_3:-25226140 | Msa0447370:CDS |
AGAACCAAATCCTAATATTT+TGG | 0.167708 | 3_3:-25225966 | Msa0447370:CDS |
CATACAACCAACGTGTTAAT+TGG | 0.167826 | 3_3:-25229610 | Msa0447370:CDS |
GAAAATACATTCTTTAAAAT+AGG | 0.186741 | 3_3:+25225686 | None:intergenic |
AAATATTAGGATTTGGTTCT+TGG | 0.200576 | 3_3:+25225969 | None:intergenic |
AAAGGTATTTGGTGCAAATT+TGG | 0.202827 | 3_3:+25225549 | None:intergenic |
ATGTAATGGAAGCAATTAAA+TGG | 0.203237 | 3_3:-25229304 | Msa0447370:CDS |
AACTCATGTTAAGTGGATTT+TGG | 0.205279 | 3_3:+25226116 | None:intergenic |
ACCTCTATGATGCACCCTTT+TGG | 0.242199 | 3_3:+25226066 | None:intergenic |
ATGAGTTACTTAGTGGGATA+TGG | 0.273448 | 3_3:-25226100 | Msa0447370:CDS |
GCAGGTGATCATGTGAAATT+TGG | 0.274678 | 3_3:-25229413 | Msa0447370:CDS |
TACTTTGAAGCACAACGTTC+TGG | 0.276345 | 3_3:-25229641 | Msa0447370:CDS |
ATTGTGCAGTTATTTGAGTT+TGG | 0.280930 | 3_3:-25228020 | Msa0447370:intron |
AAAATACATTCTTTAAAATA+GGG | 0.283671 | 3_3:+25225687 | None:intergenic |
TTGTGCAGTTATTTGAGTTT+GGG | 0.294397 | 3_3:-25228019 | Msa0447370:intron |
ATTAAAGTGGTCTGGCTATA+TGG | 0.297747 | 3_3:-25227329 | Msa0447370:CDS |
ACCTCTGCCCACAACACATT+TGG | 0.300565 | 3_3:+25229248 | None:intergenic |
CCAACCAAAATATTAGGATT+TGG | 0.302553 | 3_3:+25225962 | None:intergenic |
ATATATAGAGAGTATTTAAA+AGG | 0.306750 | 3_3:+25225766 | None:intergenic |
GTTAATTGGCGTCATCATTC+TGG | 0.309546 | 3_3:-25229596 | Msa0447370:CDS |
AAAGCTCCAACCAAAATATT+AGG | 0.310755 | 3_3:+25225956 | None:intergenic |
CAGCTGCTTCCATTGTGTTT+AGG | 0.320538 | 3_3:-25228768 | Msa0447370:CDS |
ACCATTGAAACTTCAACATT+TGG | 0.325831 | 3_3:+25227301 | None:intergenic |
TCAAAATTGTCTAGATTATC+AGG | 0.328331 | 3_3:+25225923 | None:intergenic |
AGAGAGAATAAAGGGTTCAT+AGG | 0.328810 | 3_3:-25226025 | Msa0447370:CDS |
ATTTCTAATGCTCATACATT+TGG | 0.331259 | 3_3:-25227852 | Msa0447370:CDS |
GCACACAAGGGTATGATAAT+TGG | 0.347724 | 3_3:-25226000 | Msa0447370:CDS |
CAATTAACACGTTGGTTGTA+TGG | 0.354636 | 3_3:+25229611 | None:intergenic |
CATGGAGTGCTATTGAGTTT+AGG | 0.363527 | 3_3:-25229358 | Msa0447370:CDS |
GTGACAATGATGTTTAAATC+TGG | 0.367337 | 3_3:+25229745 | None:intergenic |
GCTCATACATTTGGTGGTAT+TGG | 0.372035 | 3_3:-25227843 | Msa0447370:CDS |
TAAATTTGTTAATATTATAG+TGG | 0.388889 | 3_3:-25225645 | Msa0447370:three_prime_UTR |
TTTCAGGTGGATTTGGTTGG+AGG | 0.401221 | 3_3:-25229446 | Msa0447370:intron |
TGTAATGGAAGCAATTAAAT+GGG | 0.406228 | 3_3:-25229303 | Msa0447370:CDS |
CCTCTGCCCACAACACATTT+GGG | 0.407042 | 3_3:+25229249 | None:intergenic |
CAAAAGATCAATTGCCAAGA+TGG | 0.412945 | 3_3:-25226199 | Msa0447370:CDS |
GTATCATATAGAGAGAATAA+AGG | 0.414088 | 3_3:-25226034 | Msa0447370:CDS |
CTGGACGTTGCCAACAATAA+TGG | 0.415828 | 3_3:+25228878 | None:intergenic |
CTTGAGGTTGTCATGTCCTC+TGG | 0.417866 | 3_3:+25228859 | None:intergenic |
GTCAAAATATTCTTGTTTGT+CGG | 0.429086 | 3_3:+25227881 | None:intergenic |
AAGATAGATGAGAAGAATCC+AGG | 0.433832 | 3_3:-25228826 | Msa0447370:CDS |
TTCAGGTGGATTTGGTTGGA+GGG | 0.437613 | 3_3:-25229445 | Msa0447370:intron |
TCATGCAAAGAGGGAATAGA+AGG | 0.439518 | 3_3:-25225823 | Msa0447370:CDS |
ATCCCAGCTGAATTCTGTTA+TGG | 0.440268 | 3_3:+25227815 | None:intergenic |
ACTTTGAAGCACAACGTTCT+GGG | 0.441438 | 3_3:-25229640 | Msa0447370:CDS |
GGGAAATATGATGGAAGTGT+TGG | 0.451425 | 3_3:-25227984 | Msa0447370:CDS |
TATCATATAGAGAGAATAAA+GGG | 0.456692 | 3_3:-25226033 | Msa0447370:CDS |
TCTAATGCTCATACATTTGG+TGG | 0.457457 | 3_3:-25227849 | Msa0447370:CDS |
AGCTGGGATGTTAAGTATGC+TGG | 0.465855 | 3_3:-25227801 | Msa0447370:CDS |
CAAAATTGAGAATTTCATCA+TGG | 0.467727 | 3_3:+25226167 | None:intergenic |
ATGGGCCTAAGTACCCCAAA+AGG | 0.469761 | 3_3:-25226081 | Msa0447370:CDS |
ATACATTTGGTGGTATTGGT+TGG | 0.472675 | 3_3:-25227839 | Msa0447370:CDS |
TACTAGCCCAAATGTGTTGT+GGG | 0.473525 | 3_3:-25229255 | Msa0447370:CDS |
AGGCAAGAAATTGTTGAAGC+TGG | 0.479140 | 3_3:-25229338 | Msa0447370:CDS |
GCCAAATGTTGAAGTTTCAA+TGG | 0.480042 | 3_3:-25227302 | Msa0447370:intron |
CCCAAATGTGTTGTGGGCAG+AGG | 0.481112 | 3_3:-25229249 | Msa0447370:intron |
ACAGTTCAATTAAAGTGGTC+TGG | 0.484780 | 3_3:-25227337 | Msa0447370:CDS |
ACTAAGTAACTCATGTTAAG+TGG | 0.486492 | 3_3:+25226109 | None:intergenic |
GGTCCATAACAGAATTCAGC+TGG | 0.486609 | 3_3:-25227818 | Msa0447370:CDS |
ACTTAACATGAGTTACTTAG+TGG | 0.491572 | 3_3:-25226107 | Msa0447370:CDS |
TGAGTTACTTAGTGGGATAT+GGG | 0.492298 | 3_3:-25226099 | Msa0447370:CDS |
TTGGTTGGAGCTTTGGTAGG+AGG | 0.493848 | 3_3:-25225947 | Msa0447370:CDS |
TGGAGAAACTGCTGCAGCTA+TGG | 0.496286 | 3_3:-25228791 | Msa0447370:CDS |
CATCATTCTGGTCTTACAGA+TGG | 0.500607 | 3_3:-25229584 | Msa0447370:CDS |
GAAGAATCCAGGTTCAGATC+TGG | 0.506230 | 3_3:-25228815 | Msa0447370:CDS |
ATTGTTGAAGCTGGTGAACT+TGG | 0.513050 | 3_3:-25229329 | Msa0447370:CDS |
TTACCTTTGATGCTAAAACT+TGG | 0.515672 | 3_3:+25227775 | None:intergenic |
CTTACAGATGGTTTAGAACA+AGG | 0.516101 | 3_3:-25229572 | Msa0447370:CDS |
ATAATCAAAAGATTGTGTTA+TGG | 0.516983 | 3_3:+25229691 | None:intergenic |
TGTGAAATTTGGTTTACCAA+TGG | 0.517414 | 3_3:-25229402 | Msa0447370:CDS |
CATGGCTCACAATCCCATCT+TGG | 0.518926 | 3_3:+25226185 | None:intergenic |
AGCTACTATGCGTCGGTGAG+TGG | 0.518978 | 3_3:-25227951 | Msa0447370:CDS |
GAGAGAATAAAGGGTTCATA+GGG | 0.518983 | 3_3:-25226024 | Msa0447370:CDS |
TTGCAAAATTCATGCAAAGA+GGG | 0.519154 | 3_3:-25225832 | Msa0447370:CDS |
AAAAGATCAATTGCCAAGAT+GGG | 0.520703 | 3_3:-25226198 | Msa0447370:CDS |
CTATCACAGTTCAATTAAAG+TGG | 0.522737 | 3_3:-25227342 | Msa0447370:CDS |
ATATAATACTGCACCATTAG+TGG | 0.523912 | 3_3:-25225861 | Msa0447370:CDS |
AAATACAGAGGGAAATATGA+TGG | 0.525154 | 3_3:-25227993 | Msa0447370:CDS |
GAGACACAGACCATTATTGT+TGG | 0.526224 | 3_3:-25228888 | Msa0447370:CDS |
CAAGGGTATGATAATTGGTA+TGG | 0.527762 | 3_3:-25225995 | Msa0447370:CDS |
TGTGCAGTTATTTGAGTTTG+GGG | 0.529149 | 3_3:-25228018 | Msa0447370:intron |
AAATACATTCTTTAAAATAG+GGG | 0.535983 | 3_3:+25225688 | None:intergenic |
AAAATATTCTTGTTTGTCGG+TGG | 0.547238 | 3_3:+25227884 | None:intergenic |
AAAATTCAAGAAAGAAAGTG+AGG | 0.550203 | 3_3:+25229867 | None:intergenic |
TTTGCAAAATTCATGCAAAG+AGG | 0.550554 | 3_3:-25225833 | Msa0447370:CDS |
GATACATGGATGAGTTATTG+TGG | 0.552659 | 3_3:-25227929 | Msa0447370:CDS |
TATAATACTGCACCATTAGT+GGG | 0.560164 | 3_3:-25225860 | Msa0447370:CDS |
GTTGGAGGGTACTATGATGC+AGG | 0.563279 | 3_3:-25229431 | Msa0447370:CDS |
TGACAATGATGTTTAAATCT+GGG | 0.565379 | 3_3:+25229746 | None:intergenic |
AATACATTCTTTAAAATAGG+GGG | 0.565425 | 3_3:+25225689 | None:intergenic |
TGCGTCGGTGAGTGGATACA+TGG | 0.568122 | 3_3:-25227943 | Msa0447370:CDS |
AATGTAATCAACTTGTGACT+TGG | 0.573884 | 3_3:+25226144 | None:intergenic |
GGGTTCATAGGGTGCACACA+AGG | 0.574402 | 3_3:-25226013 | Msa0447370:CDS |
ATACTAGCCCAAATGTGTTG+TGG | 0.577675 | 3_3:-25229256 | Msa0447370:CDS |
TCTCCAGCCAGATCTGAACC+TGG | 0.578429 | 3_3:+25228808 | None:intergenic |
ATACATGGATGAGTTATTGT+GGG | 0.579757 | 3_3:-25227928 | Msa0447370:CDS |
TACAGATGGTTTAGAACAAG+GGG | 0.583836 | 3_3:-25229570 | Msa0447370:intron |
GCAAAGAGGGAATAGAAGGT+TGG | 0.590189 | 3_3:-25225819 | Msa0447370:CDS |
TATCTTAAAAGCTTGTCTTG+AGG | 0.590517 | 3_3:+25228843 | None:intergenic |
AGTTATTGTGGGGAGCTATG+TGG | 0.591433 | 3_3:-25227917 | Msa0447370:CDS |
AATCCAGGTTCAGATCTGGC+TGG | 0.593866 | 3_3:-25228811 | Msa0447370:CDS |
CTTAACATGAGTTACTTAGT+GGG | 0.597597 | 3_3:-25226106 | Msa0447370:CDS |
ATTCTCTCTATATGATACAA+TGG | 0.597953 | 3_3:+25226039 | None:intergenic |
TGGTGAACTTGGTCATGTAA+TGG | 0.602665 | 3_3:-25229318 | Msa0447370:CDS |
TTACTGTCACAATGTTGTCA+TGG | 0.603705 | 3_3:-25229376 | Msa0447370:CDS |
TGGGCCTAAGTACCCCAAAA+GGG | 0.608177 | 3_3:-25226080 | Msa0447370:CDS |
CTTACATAGAGTAATCCAGC+TGG | 0.611840 | 3_3:+25226301 | None:intergenic |
TTACAGATGGTTTAGAACAA+GGG | 0.612255 | 3_3:-25229571 | Msa0447370:CDS |
AATGTGGAAAGAACACCAGC+TGG | 0.616199 | 3_3:-25226316 | Msa0447370:CDS |
CCCAAAAGGGTGCATCATAG+AGG | 0.625621 | 3_3:-25226067 | Msa0447370:CDS |
AGTTTGGGGACAAATACAGA+GGG | 0.630720 | 3_3:-25228004 | Msa0447370:CDS |
ATTGTGACAGTAAACGCCAT+TGG | 0.633379 | 3_3:+25229386 | None:intergenic |
TTACTACTACCTGCTGAGCA+TGG | 0.641231 | 3_3:+25228710 | None:intergenic |
GTCCATAACAGAATTCAGCT+GGG | 0.643895 | 3_3:-25227817 | Msa0447370:CDS |
GATGACGCCAATTAACACGT+TGG | 0.651812 | 3_3:+25229603 | None:intergenic |
TTATTGTTGGCAACGTCCAG+AGG | 0.652974 | 3_3:-25228875 | Msa0447370:CDS |
AGTGAAGAGCTACTATGCGT+CGG | 0.655502 | 3_3:-25227958 | Msa0447370:CDS |
AAAAGTAGCTGAGAATAATG+TGG | 0.661774 | 3_3:+25228736 | None:intergenic |
GAGTTTGGGGACAAATACAG+AGG | 0.667296 | 3_3:-25228005 | Msa0447370:CDS |
GAACAATTATGTGCAAACTG+AGG | 0.668349 | 3_3:-25225891 | Msa0447370:CDS |
GTAATGGAAGCAATTAAATG+GGG | 0.669304 | 3_3:-25229302 | Msa0447370:CDS |
AAACAATGGCAGCAGCAATG+TGG | 0.670730 | 3_3:-25226332 | Msa0447370:CDS |
GGTTCATAGGGTGCACACAA+GGG | 0.675227 | 3_3:-25226012 | Msa0447370:CDS |
AAATTCAAGAAAGAAAGTGA+GGG | 0.678743 | 3_3:+25229868 | None:intergenic |
TTGAAGCACAACGTTCTGGG+AGG | 0.691689 | 3_3:-25229637 | Msa0447370:CDS |
GATTACTCTATGTAAGACAG+TGG | 0.704386 | 3_3:-25226294 | Msa0447370:CDS |
TACATGGATGAGTTATTGTG+GGG | 0.766782 | 3_3:-25227927 | Msa0447370:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATGAATAATTTATTATGTT+TGG | - | chr3_3:25226850-25226869 | Msa0447370:intron | 10.0% |
!!! | TACTAATATTTTTACTTAAT+TGG | + | chr3_3:25227352-25227371 | None:intergenic | 10.0% |
!!! | AAAATACATTCTTTAAAATA+GGG | + | chr3_3:25229789-25229808 | None:intergenic | 10.0% |
!!! | TAAATTTGTTAATATTATAG+TGG | - | chr3_3:25229828-25229847 | Msa0447370:five_prime_UTR | 10.0% |
!!! | AAAGTTGAGATTTTTATTTT+TGG | - | chr3_3:25225994-25226013 | Msa0447370:CDS | 15.0% |
!!! | AAGTTGAGATTTTTATTTTT+GGG | - | chr3_3:25225995-25226014 | Msa0447370:CDS | 15.0% |
!! | TATTAAAGTATGTAAAACAA+GGG | - | chr3_3:25226928-25226947 | Msa0447370:intron | 15.0% |
!!! | TTTTGATTGTGTTTTTTTTT+TGG | - | chr3_3:25227033-25227052 | Msa0447370:intron | 15.0% |
!! | TAAAATACAAACAAAACAAA+AGG | - | chr3_3:25227718-25227737 | Msa0447370:intron | 15.0% |
!! | AAAATACAAACAAAACAAAA+GGG | - | chr3_3:25227719-25227738 | Msa0447370:intron | 15.0% |
!!! | TATCATTTTATTTGATTTGA+TGG | - | chr3_3:25228023-25228042 | Msa0447370:intron | 15.0% |
!!! | ATATATAGAGAGTATTTAAA+AGG | + | chr3_3:25229710-25229729 | None:intergenic | 15.0% |
!!! | AAATACATTCTTTAAAATAG+GGG | + | chr3_3:25229788-25229807 | None:intergenic | 15.0% |
!!! | GAAAATACATTCTTTAAAAT+AGG | + | chr3_3:25229790-25229809 | None:intergenic | 15.0% |
!!! | AAAAAAACTTGGTACTTTTT+AGG | + | chr3_3:25225641-25225660 | None:intergenic | 20.0% |
!!! | AAAAGTACCAAGTTTTTTTT+AGG | - | chr3_3:25225642-25225661 | Msa0447370:three_prime_UTR | 20.0% |
!! | ATAATCAAAAGATTGTGTTA+TGG | + | chr3_3:25225785-25225804 | None:intergenic | 20.0% |
!!! | TTTCATTTTCTTGATTTTGA+TGG | - | chr3_3:25225947-25225966 | Msa0447370:CDS | 20.0% |
!!! | GAAACAAAATTCTGAAATTA+AGG | - | chr3_3:25226540-25226559 | Msa0447370:intron | 20.0% |
!!! | GAAATTAAGGTTTTTTACTT+AGG | - | chr3_3:25226553-25226572 | Msa0447370:intron | 20.0% |
!! | GTATTAAAGTATGTAAAACA+AGG | - | chr3_3:25226927-25226946 | Msa0447370:intron | 20.0% |
!!! | AAGATTGTAAATAGCTATTT+TGG | - | chr3_3:25226952-25226971 | Msa0447370:intron | 20.0% |
!!! | ACTACAGTAAATAGTTATTT+TGG | + | chr3_3:25227209-25227228 | None:intergenic | 20.0% |
!!! | TACTACACTATCAATTTTAA+AGG | - | chr3_3:25227282-25227301 | Msa0447370:intron | 20.0% |
!!! | TTCAAACATGTCAATTTTAT+AGG | - | chr3_3:25227796-25227815 | Msa0447370:CDS | 20.0% |
!!! | TTCTAGTATTTTATTTGTGT+TGG | - | chr3_3:25227867-25227886 | Msa0447370:CDS | 20.0% |
!! | TGAAGTCAAAAATAAAATGA+TGG | - | chr3_3:25227949-25227968 | Msa0447370:CDS | 20.0% |
!! | GAAGTCAAAAATAAAATGAT+GGG | - | chr3_3:25227950-25227969 | Msa0447370:CDS | 20.0% |
!!! | ACTTTTGAAACTAAAGTAAA+AGG | + | chr3_3:25227999-25228018 | None:intergenic | 20.0% |
!! | GACTATATAGCTAATATAAA+TGG | - | chr3_3:25228219-25228238 | Msa0447370:intron | 20.0% |
!! | TTTAGAAGAAGAAAATTTCA+GGG | - | chr3_3:25228655-25228674 | Msa0447370:intron | 20.0% |
!! | AAAAATAACAAATGGATCAA+GGG | + | chr3_3:25228763-25228782 | None:intergenic | 20.0% |
!! | AAAAAATAACAAATGGATCA+AGG | + | chr3_3:25228764-25228783 | None:intergenic | 20.0% |
!!! | TTGATCCATTTGTTATTTTT+TGG | - | chr3_3:25228763-25228782 | Msa0447370:CDS | 20.0% |
!! | ACTATCCAAAAAATAACAAA+TGG | + | chr3_3:25228771-25228790 | None:intergenic | 20.0% |
!!! | ATTTGTTATTTTTTGGATAG+TGG | - | chr3_3:25228770-25228789 | Msa0447370:CDS | 20.0% |
!!! | TTTGTTATTTTTTGGATAGT+GGG | - | chr3_3:25228771-25228790 | Msa0447370:CDS | 20.0% |
!! | AAAAGAACAACAAATATTTC+TGG | - | chr3_3:25228878-25228897 | Msa0447370:CDS | 20.0% |
!! | TACTAGTAAACTTTAACATA+AGG | + | chr3_3:25228978-25228997 | None:intergenic | 20.0% |
!! | TATCATATAGAGAGAATAAA+GGG | - | chr3_3:25229440-25229459 | Msa0447370:CDS | 20.0% |
!!! | AATACATTCTTTAAAATAGG+GGG | + | chr3_3:25229787-25229806 | None:intergenic | 20.0% |
! | AAATTCAAGAAAGAAAGTGA+GGG | + | chr3_3:25225608-25225627 | None:intergenic | 25.0% |
! | AAAATTCAAGAAAGAAAGTG+AGG | + | chr3_3:25225609-25225628 | None:intergenic | 25.0% |
! | TGACAATGATGTTTAAATCT+GGG | + | chr3_3:25225730-25225749 | None:intergenic | 25.0% |
!! | ATGTAATGGAAGCAATTAAA+TGG | - | chr3_3:25226169-25226188 | Msa0447370:CDS | 25.0% |
!! | TGTAATGGAAGCAATTAAAT+GGG | - | chr3_3:25226170-25226189 | Msa0447370:CDS | 25.0% |
!!! | ATTAAGGTTTTTTACTTAGG+TGG | - | chr3_3:25226556-25226575 | Msa0447370:intron | 25.0% |
!!! | TTAAGGTTTTTTACTTAGGT+GGG | - | chr3_3:25226557-25226576 | Msa0447370:intron | 25.0% |
!!! | ATTTGTTTTCCTAAACACAA+TGG | + | chr3_3:25226717-25226736 | None:intergenic | 25.0% |
! | TACTTGTCTCTTAAAGTTAA+AGG | + | chr3_3:25226910-25226929 | None:intergenic | 25.0% |
! | TGACTAACAAAACATATAAC+AGG | + | chr3_3:25227087-25227106 | None:intergenic | 25.0% |
!!! | TTGGAATTTTGACATATTCA+TGG | - | chr3_3:25227151-25227170 | Msa0447370:intron | 25.0% |
!!! | TCAATTTTAAAGGCAAATAG+TGG | - | chr3_3:25227292-25227311 | Msa0447370:intron | 25.0% |
!!! | CAATTTTAAAGGCAAATAGT+GGG | - | chr3_3:25227293-25227312 | Msa0447370:intron | 25.0% |
!!! | AATTTTAAAGGCAAATAGTG+GGG | - | chr3_3:25227294-25227313 | Msa0447370:intron | 25.0% |
!! | GTCAAAATATTCTTGTTTGT+CGG | + | chr3_3:25227595-25227614 | None:intergenic | 25.0% |
! | ATTTCTAATGCTCATACATT+TGG | - | chr3_3:25227621-25227640 | Msa0447370:intron | 25.0% |
! | AGACAAAAAAGAGTGATTAA+AGG | + | chr3_3:25227748-25227767 | None:intergenic | 25.0% |
! | ATCTAAGGGATATTGTTAAT+AGG | - | chr3_3:25228052-25228071 | Msa0447370:intron | 25.0% |
!! | TATATAGTCTATTCTTTTGG+AGG | + | chr3_3:25228208-25228227 | None:intergenic | 25.0% |
!! | AGCTATATAGTCTATTCTTT+TGG | + | chr3_3:25228211-25228230 | None:intergenic | 25.0% |
! | AGAATAGTCATTGGTAAATA+AGG | + | chr3_3:25228624-25228643 | None:intergenic | 25.0% |
! | TGCATATATAGAATAGTCAT+TGG | + | chr3_3:25228633-25228652 | None:intergenic | 25.0% |
! | GTTTAGAAGAAGAAAATTTC+AGG | - | chr3_3:25228654-25228673 | Msa0447370:intron | 25.0% |
! | TTTCTTAAAGCCCAAAATAA+AGG | + | chr3_3:25228797-25228816 | None:intergenic | 25.0% |
!!! | TGTTGTTCTTTTAGAAATGT+GGG | + | chr3_3:25228870-25228889 | None:intergenic | 25.0% |
!!! | TTGTTGTTCTTTTAGAAATG+TGG | + | chr3_3:25228871-25228890 | None:intergenic | 25.0% |
!! | ATGTACATTTGAAGTGATAT+TGG | - | chr3_3:25228935-25228954 | Msa0447370:intron | 25.0% |
!! | TGTACATTTGAAGTGATATT+GGG | - | chr3_3:25228936-25228955 | Msa0447370:intron | 25.0% |
! | CAAAATTGAGAATTTCATCA+TGG | + | chr3_3:25229309-25229328 | None:intergenic | 25.0% |
!!! | TCACAAGTTGATTACATTTT+GGG | - | chr3_3:25229334-25229353 | Msa0447370:CDS | 25.0% |
! | ATTCTCTCTATATGATACAA+TGG | + | chr3_3:25229437-25229456 | None:intergenic | 25.0% |
! | GTATCATATAGAGAGAATAA+AGG | - | chr3_3:25229439-25229458 | Msa0447370:CDS | 25.0% |
!!! | AAATATTAGGATTTGGTTCT+TGG | + | chr3_3:25229507-25229526 | None:intergenic | 25.0% |
!! | AGAACCAAATCCTAATATTT+TGG | - | chr3_3:25229507-25229526 | Msa0447370:intron | 25.0% |
! | TCAAAATTGTCTAGATTATC+AGG | + | chr3_3:25229553-25229572 | None:intergenic | 25.0% |
!! | TGATAATCTAGACAATTTTG+AGG | - | chr3_3:25229552-25229571 | Msa0447370:intron | 25.0% |
!!! | AGTACCAAGTTTTTTTTAGG+AGG | - | chr3_3:25225645-25225664 | Msa0447370:three_prime_UTR | 30.0% |
!!! | GTACCAAGTTTTTTTTAGGA+GGG | - | chr3_3:25225646-25225665 | Msa0447370:three_prime_UTR | 30.0% |
GTGACAATGATGTTTAAATC+TGG | + | chr3_3:25225731-25225750 | None:intergenic | 30.0% | |
! | TTACAGATGGTTTAGAACAA+GGG | - | chr3_3:25225902-25225921 | Msa0447370:CDS | 30.0% |
!!! | TTTTGGGTTTGTGTTTTTTC+AGG | - | chr3_3:25226011-25226030 | Msa0447370:CDS | 30.0% |
! | TGTGAAATTTGGTTTACCAA+TGG | - | chr3_3:25226071-25226090 | Msa0447370:CDS | 30.0% |
! | GTAATGGAAGCAATTAAATG+GGG | - | chr3_3:25226171-25226190 | Msa0447370:CDS | 30.0% |
TCTCAAATTATTAGCAGTGT+GGG | + | chr3_3:25226314-25226333 | None:intergenic | 30.0% | |
TTCTCAAATTATTAGCAGTG+TGG | + | chr3_3:25226315-25226334 | None:intergenic | 30.0% | |
! | TTTCCAATTTTTGAACTTCC+TGG | - | chr3_3:25226492-25226511 | Msa0447370:intron | 30.0% |
TATCTTAAAAGCTTGTCTTG+AGG | + | chr3_3:25226633-25226652 | None:intergenic | 30.0% | |
AAAAGTAGCTGAGAATAATG+TGG | + | chr3_3:25226740-25226759 | None:intergenic | 30.0% | |
GTGAATATAGCACAATTTAG+AGG | + | chr3_3:25226789-25226808 | None:intergenic | 30.0% | |
TTGTGCTATATTCACTATAG+TGG | - | chr3_3:25226794-25226813 | Msa0447370:intron | 30.0% | |
! | AAGGTGCTTAAAAATGAAGT+GGG | + | chr3_3:25226891-25226910 | None:intergenic | 30.0% |
!! | AAAGGTGCTTAAAAATGAAG+TGG | + | chr3_3:25226892-25226911 | None:intergenic | 30.0% |
CTCTTTGATTAGTAATCTCA+TGG | + | chr3_3:25227117-25227136 | None:intergenic | 30.0% | |
ATTATGCATTCACACTTATC+AGG | + | chr3_3:25227246-25227265 | None:intergenic | 30.0% | |
! | ATTGTGCAGTTATTTGAGTT+TGG | - | chr3_3:25227453-25227472 | Msa0447370:intron | 30.0% |
! | TTGTGCAGTTATTTGAGTTT+GGG | - | chr3_3:25227454-25227473 | Msa0447370:intron | 30.0% |
AAATACAGAGGGAAATATGA+TGG | - | chr3_3:25227480-25227499 | Msa0447370:intron | 30.0% | |
ATACATGGATGAGTTATTGT+GGG | - | chr3_3:25227545-25227564 | Msa0447370:intron | 30.0% | |
! | AAAATATTCTTGTTTGTCGG+TGG | + | chr3_3:25227592-25227611 | None:intergenic | 30.0% |
TTACCTTTGATGCTAAAACT+TGG | + | chr3_3:25227701-25227720 | None:intergenic | 30.0% | |
!!! | TGTTGGTTTTCCTTTTTCAA+TGG | - | chr3_3:25227884-25227903 | Msa0447370:CDS | 30.0% |
GAGAAATAAGCCATTGAAAA+AGG | + | chr3_3:25227897-25227916 | None:intergenic | 30.0% | |
! | ATGTTAGTAAAGCATTATGC+AGG | + | chr3_3:25227930-25227949 | None:intergenic | 30.0% |
! | GATGGGTTTAAGACTTAATT+TGG | - | chr3_3:25227967-25227986 | Msa0447370:CDS | 30.0% |
ATTTGATGGAGCAATATCTA+AGG | - | chr3_3:25228037-25228056 | Msa0447370:intron | 30.0% | |
TTTGATGGAGCAATATCTAA+GGG | - | chr3_3:25228038-25228057 | Msa0447370:intron | 30.0% | |
CTATCACAGTTCAATTAAAG+TGG | - | chr3_3:25228131-25228150 | Msa0447370:intron | 30.0% | |
ACCATTGAAACTTCAACATT+TGG | + | chr3_3:25228175-25228194 | None:intergenic | 30.0% | |
! | ACCCTTTTTATGTTTTCTTC+AGG | - | chr3_3:25228524-25228543 | Msa0447370:intron | 30.0% |
CCCTGAAGAAAACATAAAAA+GGG | + | chr3_3:25228528-25228547 | None:intergenic | 30.0% | |
! | CCCTTTTTATGTTTTCTTCA+GGG | - | chr3_3:25228525-25228544 | Msa0447370:intron | 30.0% |
ACCCTGAAGAAAACATAAAA+AGG | + | chr3_3:25228529-25228548 | None:intergenic | 30.0% | |
TAATGCACAATGATTGATAG+TGG | - | chr3_3:25228698-25228717 | Msa0447370:intron | 30.0% | |
!! | TATTTCTGGAAATGTACTTC+TGG | - | chr3_3:25228892-25228911 | Msa0447370:CDS | 30.0% |
! | GTAACTTTTGCAGTTTTTGA+TGG | - | chr3_3:25229036-25229055 | Msa0447370:intron | 30.0% |
TCATGTCTCAACAAAAACAA+TGG | - | chr3_3:25229127-25229146 | Msa0447370:intron | 30.0% | |
!! | TGATCTTTTGATTCTCACTT+TGG | + | chr3_3:25229264-25229283 | None:intergenic | 30.0% |
AAAAGATCAATTGCCAAGAT+GGG | - | chr3_3:25229275-25229294 | Msa0447370:CDS | 30.0% | |
AATGTAATCAACTTGTGACT+TGG | + | chr3_3:25229332-25229351 | None:intergenic | 30.0% | |
!!! | GTCACAAGTTGATTACATTT+TGG | - | chr3_3:25229333-25229352 | Msa0447370:CDS | 30.0% |
!! | AACTCATGTTAAGTGGATTT+TGG | + | chr3_3:25229360-25229379 | None:intergenic | 30.0% |
ACTAAGTAACTCATGTTAAG+TGG | + | chr3_3:25229367-25229386 | None:intergenic | 30.0% | |
ACTTAACATGAGTTACTTAG+TGG | - | chr3_3:25229366-25229385 | Msa0447370:CDS | 30.0% | |
CTTAACATGAGTTACTTAGT+GGG | - | chr3_3:25229367-25229386 | Msa0447370:CDS | 30.0% | |
CCAACCAAAATATTAGGATT+TGG | + | chr3_3:25229514-25229533 | None:intergenic | 30.0% | |
!!! | CCAAATCCTAATATTTTGGT+TGG | - | chr3_3:25229511-25229530 | Msa0447370:intron | 30.0% |
AAAGCTCCAACCAAAATATT+AGG | + | chr3_3:25229520-25229539 | None:intergenic | 30.0% | |
!!! | TAATATTTTGGTTGGAGCTT+TGG | - | chr3_3:25229519-25229538 | Msa0447370:intron | 30.0% |
!! | TAGACAATTTTGAGGATCAA+AGG | - | chr3_3:25229560-25229579 | Msa0447370:intron | 30.0% |
ATATAATACTGCACCATTAG+TGG | - | chr3_3:25229612-25229631 | Msa0447370:CDS | 30.0% | |
TATAATACTGCACCATTAGT+GGG | - | chr3_3:25229613-25229632 | Msa0447370:CDS | 30.0% | |
TTTGCAAAATTCATGCAAAG+AGG | - | chr3_3:25229640-25229659 | Msa0447370:CDS | 30.0% | |
TTGCAAAATTCATGCAAAGA+GGG | - | chr3_3:25229641-25229660 | Msa0447370:CDS | 30.0% | |
CTTCCCTCCTAAAAAAAACT+TGG | + | chr3_3:25225652-25225671 | None:intergenic | 35.0% | |
! | CAATTAACACGTTGGTTGTA+TGG | + | chr3_3:25225865-25225884 | None:intergenic | 35.0% |
CATACAACCAACGTGTTAAT+TGG | - | chr3_3:25225863-25225882 | Msa0447370:CDS | 35.0% | |
! | CTTACAGATGGTTTAGAACA+AGG | - | chr3_3:25225901-25225920 | Msa0447370:CDS | 35.0% |
! | TACAGATGGTTTAGAACAAG+GGG | - | chr3_3:25225903-25225922 | Msa0447370:CDS | 35.0% |
!!! | TGTGTTTTTTCAGGTGGATT+TGG | - | chr3_3:25226020-25226039 | Msa0447370:CDS | 35.0% |
!!! | TTTTTTCAGGTGGATTTGGT+TGG | - | chr3_3:25226024-25226043 | Msa0447370:CDS | 35.0% |
TTACTGTCACAATGTTGTCA+TGG | - | chr3_3:25226097-25226116 | Msa0447370:CDS | 35.0% | |
!! | ATAGCTTGTGAGACATTTTG+AGG | - | chr3_3:25226417-25226436 | Msa0447370:CDS | 35.0% |
CAACCAGGAAGTTCAAAAAT+TGG | + | chr3_3:25226498-25226517 | None:intergenic | 35.0% | |
CATTAATCATCACATCAACC+AGG | + | chr3_3:25226513-25226532 | None:intergenic | 35.0% | |
! | CTGGTTGATGTGATGATTAA+TGG | - | chr3_3:25226511-25226530 | Msa0447370:intron | 35.0% |
!!! | TTTTTTACTTAGGTGGGTGA+TGG | - | chr3_3:25226563-25226582 | Msa0447370:intron | 35.0% |
AAGATAGATGAGAAGAATCC+AGG | - | chr3_3:25226647-25226666 | Msa0447370:intron | 35.0% | |
! | AAGAGACTCGTGAATGTTTT+TGG | - | chr3_3:25227132-25227151 | Msa0447370:intron | 35.0% |
! | GACATATTCATGGACTATAG+TGG | - | chr3_3:25227161-25227180 | Msa0447370:intron | 35.0% |
CACTTATCAGGAACATTACT+TGG | + | chr3_3:25227234-25227253 | None:intergenic | 35.0% | |
! | TGTGCAGTTATTTGAGTTTG+GGG | - | chr3_3:25227455-25227474 | Msa0447370:intron | 35.0% |
GATACATGGATGAGTTATTG+TGG | - | chr3_3:25227544-25227563 | Msa0447370:intron | 35.0% | |
TACATGGATGAGTTATTGTG+GGG | - | chr3_3:25227546-25227565 | Msa0447370:intron | 35.0% | |
TCTAATGCTCATACATTTGG+TGG | - | chr3_3:25227624-25227643 | Msa0447370:intron | 35.0% | |
!! | ATACATTTGGTGGTATTGGT+TGG | - | chr3_3:25227634-25227653 | Msa0447370:intron | 35.0% |
!! | TCTCCAAGTTTTAGCATCAA+AGG | - | chr3_3:25227695-25227714 | Msa0447370:intron | 35.0% |
TTTGAATTAAGCCAACCTAG+AGG | + | chr3_3:25227782-25227801 | None:intergenic | 35.0% | |
AGTAAAAGCAAAAAGCAGCA+TGG | + | chr3_3:25227823-25227842 | None:intergenic | 35.0% | |
!!! | TGCTGCTTTTTGCTTTTACT+TGG | - | chr3_3:25227823-25227842 | Msa0447370:CDS | 35.0% |
ACAGTTCAATTAAAGTGGTC+TGG | - | chr3_3:25228136-25228155 | Msa0447370:intron | 35.0% | |
ATTAAAGTGGTCTGGCTATA+TGG | - | chr3_3:25228144-25228163 | Msa0447370:intron | 35.0% | |
GCCAAATGTTGAAGTTTCAA+TGG | - | chr3_3:25228171-25228190 | Msa0447370:intron | 35.0% | |
!! | ACATGCATTGACTGTCAAAA+TGG | - | chr3_3:25228385-25228404 | Msa0447370:intron | 35.0% |
TCAATCAGATAAGCAATCAG+TGG | + | chr3_3:25228423-25228442 | None:intergenic | 35.0% | |
AGGGTTTGCAATAAATCAGT+TGG | - | chr3_3:25228544-25228563 | Msa0447370:intron | 35.0% | |
! | AAAACTGCTAGAGCACATTT+TGG | - | chr3_3:25228576-25228595 | Msa0447370:intron | 35.0% |
!!! | TAGAGCACATTTTGGTTACT+TGG | - | chr3_3:25228584-25228603 | Msa0447370:intron | 35.0% |
GATTACTCTATGTAAGACAG+TGG | - | chr3_3:25229179-25229198 | Msa0447370:intron | 35.0% | |
CAAAAGATCAATTGCCAAGA+TGG | - | chr3_3:25229274-25229293 | Msa0447370:CDS | 35.0% | |
ATGAGTTACTTAGTGGGATA+TGG | - | chr3_3:25229373-25229392 | Msa0447370:CDS | 35.0% | |
TGAGTTACTTAGTGGGATAT+GGG | - | chr3_3:25229374-25229393 | Msa0447370:CDS | 35.0% | |
AGAGAGAATAAAGGGTTCAT+AGG | - | chr3_3:25229448-25229467 | Msa0447370:intron | 35.0% | |
GAGAGAATAAAGGGTTCATA+GGG | - | chr3_3:25229449-25229468 | Msa0447370:intron | 35.0% | |
! | CAAGGGTATGATAATTGGTA+TGG | - | chr3_3:25229478-25229497 | Msa0447370:intron | 35.0% |
GAACAATTATGTGCAAACTG+AGG | - | chr3_3:25229582-25229601 | Msa0447370:CDS | 35.0% | |
TTTGCAAAAACTCCCACTAA+TGG | + | chr3_3:25229628-25229647 | None:intergenic | 35.0% | |
!! | TACTTTGAAGCACAACGTTC+TGG | - | chr3_3:25225832-25225851 | Msa0447370:CDS | 40.0% |
!! | ACTTTGAAGCACAACGTTCT+GGG | - | chr3_3:25225833-25225852 | Msa0447370:CDS | 40.0% |
GTTAATTGGCGTCATCATTC+TGG | - | chr3_3:25225877-25225896 | Msa0447370:CDS | 40.0% | |
!! | CATCATTCTGGTCTTACAGA+TGG | - | chr3_3:25225889-25225908 | Msa0447370:CDS | 40.0% |
!!! | TGGGTTTGTGTTTTTTCAGG+TGG | - | chr3_3:25226014-25226033 | Msa0447370:CDS | 40.0% |
GCAGGTGATCATGTGAAATT+TGG | - | chr3_3:25226060-25226079 | Msa0447370:CDS | 40.0% | |
ATTGTGACAGTAAACGCCAT+TGG | + | chr3_3:25226090-25226109 | None:intergenic | 40.0% | |
! | CATGGAGTGCTATTGAGTTT+AGG | - | chr3_3:25226115-25226134 | Msa0447370:CDS | 40.0% |
AGGCAAGAAATTGTTGAAGC+TGG | - | chr3_3:25226135-25226154 | Msa0447370:CDS | 40.0% | |
ATTGTTGAAGCTGGTGAACT+TGG | - | chr3_3:25226144-25226163 | Msa0447370:CDS | 40.0% | |
TGGTGAACTTGGTCATGTAA+TGG | - | chr3_3:25226155-25226174 | Msa0447370:CDS | 40.0% | |
ATACTAGCCCAAATGTGTTG+TGG | - | chr3_3:25226217-25226236 | Msa0447370:CDS | 40.0% | |
TACTAGCCCAAATGTGTTGT+GGG | - | chr3_3:25226218-25226237 | Msa0447370:CDS | 40.0% | |
GATTAGACATGTCACAGTGT+CGG | + | chr3_3:25226378-25226397 | None:intergenic | 40.0% | |
GAGACACAGACCATTATTGT+TGG | - | chr3_3:25226585-25226604 | Msa0447370:intron | 40.0% | |
ACTATAGTGGCACTAGTGTT+TGG | - | chr3_3:25226807-25226826 | Msa0447370:intron | 40.0% | |
GGCATTGTCTCGCATATTTA+AGG | - | chr3_3:25227182-25227201 | Msa0447370:intron | 40.0% | |
AGTTTGGGGACAAATACAGA+GGG | - | chr3_3:25227469-25227488 | Msa0447370:intron | 40.0% | |
! | GGGAAATATGATGGAAGTGT+TGG | - | chr3_3:25227489-25227508 | Msa0447370:intron | 40.0% |
! | GCTCATACATTTGGTGGTAT+TGG | - | chr3_3:25227630-25227649 | Msa0447370:intron | 40.0% |
GTCCATAACAGAATTCAGCT+GGG | - | chr3_3:25227656-25227675 | Msa0447370:intron | 40.0% | |
ATCCCAGCTGAATTCTGTTA+TGG | + | chr3_3:25227661-25227680 | None:intergenic | 40.0% | |
! | TTCAATGGCTTATTTCTCGC+TGG | - | chr3_3:25227899-25227918 | Msa0447370:CDS | 40.0% |
TAGACTGCATCAATTGCACA+TGG | + | chr3_3:25228114-25228133 | None:intergenic | 40.0% | |
CAACCTTTCAACTCATCATG+AGG | - | chr3_3:25228460-25228479 | Msa0447370:intron | 40.0% | |
! | TTGCCTCATGATGAGTTGAA+AGG | + | chr3_3:25228466-25228485 | None:intergenic | 40.0% |
CATGAGGCAAGCTATTACTA+TGG | - | chr3_3:25228476-25228495 | Msa0447370:intron | 40.0% | |
! | AAGGGTGTATTCCATGAATG+TGG | + | chr3_3:25228510-25228529 | None:intergenic | 40.0% |
! | GTGCTCTAGCAGTTTTACAA+TGG | + | chr3_3:25228572-25228591 | None:intergenic | 40.0% |
!! | GCACAATGATTGATAGTGGA+TGG | - | chr3_3:25228702-25228721 | Msa0447370:intron | 40.0% |
TAACAAATGGATCAAGGGCA+AGG | + | chr3_3:25228758-25228777 | None:intergenic | 40.0% | |
!!! | TGGATAGTGGGCCTTTATTT+TGG | - | chr3_3:25228783-25228802 | Msa0447370:CDS | 40.0% |
!!! | GGATAGTGGGCCTTTATTTT+GGG | - | chr3_3:25228784-25228803 | Msa0447370:CDS | 40.0% |
! | GAAAGTTGATCCCTTTGCAT+AGG | + | chr3_3:25228841-25228860 | None:intergenic | 40.0% |
!! | CTTTTAGAAATGTGGGAGTG+TGG | + | chr3_3:25228863-25228882 | None:intergenic | 40.0% |
CTTACATAGAGTAATCCAGC+TGG | + | chr3_3:25229175-25229194 | None:intergenic | 40.0% | |
! | GCACACAAGGGTATGATAAT+TGG | - | chr3_3:25229473-25229492 | Msa0447370:intron | 40.0% |
!!! | ATTTTGGTTGGAGCTTTGGT+AGG | - | chr3_3:25229523-25229542 | Msa0447370:intron | 40.0% |
TCATGCAAAGAGGGAATAGA+AGG | - | chr3_3:25229650-25229669 | Msa0447370:CDS | 40.0% | |
GATGACGCCAATTAACACGT+TGG | + | chr3_3:25225873-25225892 | None:intergenic | 45.0% | |
! | TTTCAGGTGGATTTGGTTGG+AGG | - | chr3_3:25226027-25226046 | Msa0447370:CDS | 45.0% |
! | TTCAGGTGGATTTGGTTGGA+GGG | - | chr3_3:25226028-25226047 | Msa0447370:CDS | 45.0% |
ACTGTGACATGTCTAATCCG+AGG | - | chr3_3:25226380-25226399 | Msa0447370:CDS | 45.0% | |
GTCTCACAAGCTATGAAGCA+CGG | + | chr3_3:25226411-25226430 | None:intergenic | 45.0% | |
CTGGACGTTGCCAACAATAA+TGG | + | chr3_3:25226598-25226617 | None:intergenic | 45.0% | |
TTATTGTTGGCAACGTCCAG+AGG | - | chr3_3:25226598-25226617 | Msa0447370:intron | 45.0% | |
GAAGAATCCAGGTTCAGATC+TGG | - | chr3_3:25226658-25226677 | Msa0447370:intron | 45.0% | |
CAGCTGCTTCCATTGTGTTT+AGG | - | chr3_3:25226705-25226724 | Msa0447370:intron | 45.0% | |
TTACTACTACCTGCTGAGCA+TGG | + | chr3_3:25226766-25226785 | None:intergenic | 45.0% | |
AGTGGCACTAGTGTTTGGTT+TGG | - | chr3_3:25226812-25226831 | Msa0447370:intron | 45.0% | |
GTGGGGTATGAAGTATGAAC+TGG | - | chr3_3:25227311-25227330 | Msa0447370:CDS | 45.0% | |
GAGTTTGGGGACAAATACAG+AGG | - | chr3_3:25227468-25227487 | Msa0447370:intron | 45.0% | |
AGTGAAGAGCTACTATGCGT+CGG | - | chr3_3:25227515-25227534 | Msa0447370:intron | 45.0% | |
AGTTATTGTGGGGAGCTATG+TGG | - | chr3_3:25227556-25227575 | Msa0447370:intron | 45.0% | |
GGTCCATAACAGAATTCAGC+TGG | - | chr3_3:25227655-25227674 | Msa0447370:intron | 45.0% | |
AGCTGGGATGTTAAGTATGC+TGG | - | chr3_3:25227672-25227691 | Msa0447370:intron | 45.0% | |
GTCTCATTTCACGTTCCTCT+AGG | - | chr3_3:25227764-25227783 | Msa0447370:intron | 45.0% | |
CATTTCACGTTCCTCTAGGT+TGG | - | chr3_3:25227768-25227787 | Msa0447370:intron | 45.0% | |
TGTGCCTTCTACCTATGCAA+AGG | - | chr3_3:25228827-25228846 | Msa0447370:CDS | 45.0% | |
GTGCCTTCTACCTATGCAAA+GGG | - | chr3_3:25228828-25228847 | Msa0447370:CDS | 45.0% | |
GATCCCTTTGCATAGGTAGA+AGG | + | chr3_3:25228834-25228853 | None:intergenic | 45.0% | |
AAACAATGGCAGCAGCAATG+TGG | - | chr3_3:25229141-25229160 | Msa0447370:intron | 45.0% | |
AATGTGGAAAGAACACCAGC+TGG | - | chr3_3:25229157-25229176 | Msa0447370:intron | 45.0% | |
! | CTCTATGATGCACCCTTTTG+GGG | + | chr3_3:25229408-25229427 | None:intergenic | 45.0% |
! | CCTCTATGATGCACCCTTTT+GGG | + | chr3_3:25229409-25229428 | None:intergenic | 45.0% |
! | ACCTCTATGATGCACCCTTT+TGG | + | chr3_3:25229410-25229429 | None:intergenic | 45.0% |
GCAAAGAGGGAATAGAAGGT+TGG | - | chr3_3:25229654-25229673 | Msa0447370:CDS | 45.0% | |
! | TTGAAGCACAACGTTCTGGG+AGG | - | chr3_3:25225836-25225855 | Msa0447370:CDS | 50.0% |
!! | GTTGGAGGGTACTATGATGC+AGG | - | chr3_3:25226042-25226061 | Msa0447370:CDS | 50.0% |
CCTCTGCCCACAACACATTT+GGG | + | chr3_3:25226227-25226246 | None:intergenic | 50.0% | |
ACCTCTGCCCACAACACATT+TGG | + | chr3_3:25226228-25226247 | None:intergenic | 50.0% | |
TATGAAGCACGGACACTCCT+CGG | + | chr3_3:25226400-25226419 | None:intergenic | 50.0% | |
CTTGAGGTTGTCATGTCCTC+TGG | + | chr3_3:25226617-25226636 | None:intergenic | 50.0% | |
AATCCAGGTTCAGATCTGGC+TGG | - | chr3_3:25226662-25226681 | Msa0447370:intron | 50.0% | |
TGGAGAAACTGCTGCAGCTA+TGG | - | chr3_3:25226682-25226701 | Msa0447370:intron | 50.0% | |
! | ACTTTTGCACCATGCTCAGC+AGG | - | chr3_3:25226754-25226773 | Msa0447370:intron | 50.0% |
!! | GGCACTAGTGTTTGGTTTGG+TGG | - | chr3_3:25226815-25226834 | Msa0447370:intron | 50.0% |
TGGTGTGTGCTCCACATTCA+TGG | - | chr3_3:25228496-25228515 | Msa0447370:intron | 50.0% | |
CATGGCTCACAATCCCATCT+TGG | + | chr3_3:25229291-25229310 | None:intergenic | 50.0% | |
ATGGGCCTAAGTACCCCAAA+AGG | - | chr3_3:25229392-25229411 | Msa0447370:CDS | 50.0% | |
TGGGCCTAAGTACCCCAAAA+GGG | - | chr3_3:25229393-25229412 | Msa0447370:CDS | 50.0% | |
!!! | TGCACCCTTTTGGGGTACTT+AGG | + | chr3_3:25229400-25229419 | None:intergenic | 50.0% |
! | CCCAAAAGGGTGCATCATAG+AGG | - | chr3_3:25229406-25229425 | Msa0447370:CDS | 50.0% |
GGTTCATAGGGTGCACACAA+GGG | - | chr3_3:25229461-25229480 | Msa0447370:intron | 50.0% | |
! | TTGGTTGGAGCTTTGGTAGG+AGG | - | chr3_3:25229526-25229545 | Msa0447370:intron | 50.0% |
CCCAAATGTGTTGTGGGCAG+AGG | - | chr3_3:25226224-25226243 | Msa0447370:CDS | 55.0% | |
TCTCCAGCCAGATCTGAACC+TGG | + | chr3_3:25226668-25226687 | None:intergenic | 55.0% | |
! | AGCTACTATGCGTCGGTGAG+TGG | - | chr3_3:25227522-25227541 | Msa0447370:intron | 55.0% |
! | TGCGTCGGTGAGTGGATACA+TGG | - | chr3_3:25227530-25227549 | Msa0447370:intron | 55.0% |
GGGTTCATAGGGTGCACACA+AGG | - | chr3_3:25229460-25229479 | Msa0447370:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 25225562 | 25229933 | 25225562 | ID=Msa0447370;Name=Msa0447370 |
chr3_3 | mRNA | 25225562 | 25229933 | 25225562 | ID=Msa0447370-mRNA-1;Parent=Msa0447370;Name=Msa0447370-mRNA-1;_AED=0.22;_eAED=0.22;_QI=120|0.6|0.83|1|1|1|6|219|546 |
chr3_3 | exon | 25225562 | 25226446 | 25225562 | ID=Msa0447370-mRNA-1:exon:4980;Parent=Msa0447370-mRNA-1 |
chr3_3 | exon | 25227303 | 25227365 | 25227303 | ID=Msa0447370-mRNA-1:exon:4979;Parent=Msa0447370-mRNA-1 |
chr3_3 | exon | 25227779 | 25228033 | 25227779 | ID=Msa0447370-mRNA-1:exon:4978;Parent=Msa0447370-mRNA-1 |
chr3_3 | exon | 25228720 | 25228920 | 25228720 | ID=Msa0447370-mRNA-1:exon:4977;Parent=Msa0447370-mRNA-1 |
chr3_3 | exon | 25229250 | 25229462 | 25229250 | ID=Msa0447370-mRNA-1:exon:4976;Parent=Msa0447370-mRNA-1 |
chr3_3 | exon | 25229571 | 25229933 | 25229571 | ID=Msa0447370-mRNA-1:exon:4975;Parent=Msa0447370-mRNA-1 |
chr3_3 | five_prime_UTR | 25229814 | 25229933 | 25229814 | ID=Msa0447370-mRNA-1:five_prime_utr;Parent=Msa0447370-mRNA-1 |
chr3_3 | CDS | 25229571 | 25229813 | 25229571 | ID=Msa0447370-mRNA-1:cds;Parent=Msa0447370-mRNA-1 |
chr3_3 | CDS | 25229250 | 25229462 | 25229250 | ID=Msa0447370-mRNA-1:cds;Parent=Msa0447370-mRNA-1 |
chr3_3 | CDS | 25228720 | 25228920 | 25228720 | ID=Msa0447370-mRNA-1:cds;Parent=Msa0447370-mRNA-1 |
chr3_3 | CDS | 25227779 | 25228033 | 25227779 | ID=Msa0447370-mRNA-1:cds;Parent=Msa0447370-mRNA-1 |
chr3_3 | CDS | 25227303 | 25227365 | 25227303 | ID=Msa0447370-mRNA-1:cds;Parent=Msa0447370-mRNA-1 |
chr3_3 | CDS | 25225781 | 25226446 | 25225781 | ID=Msa0447370-mRNA-1:cds;Parent=Msa0447370-mRNA-1 |
chr3_3 | three_prime_UTR | 25225562 | 25225780 | 25225562 | ID=Msa0447370-mRNA-1:three_prime_utr;Parent=Msa0447370-mRNA-1 |
Gene Sequence |
Protein sequence |