Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0587940 | XP_013454733.1 | 97.191 | 178 | 3 | 1 | 1 | 176 | 1 | 178 | 3.02e-120 | 347 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0587940 | sp|P49680|IAA6_PEA | 92.179 | 179 | 11 | 2 | 1 | 176 | 1 | 179 | 1.42e-106 | 305 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0587940 | TR | AUX/IAA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016670 | Msa0587940 | 0.803138 | 4.021786e-49 | -8.615850e-47 |
| Msa0017510 | Msa0587940 | 0.821544 | 3.817037e-53 | -8.615850e-47 |
| Msa0022550 | Msa0587940 | 0.816168 | 6.356396e-52 | -8.615850e-47 |
| Msa0043670 | Msa0587940 | -0.800750 | 1.244865e-48 | -8.615850e-47 |
| Msa0044020 | Msa0587940 | 0.815755 | 7.856353e-52 | -8.615850e-47 |
| Msa0049790 | Msa0587940 | 0.804956 | 1.683917e-49 | -8.615850e-47 |
| Msa0077200 | Msa0587940 | 0.805517 | 1.285160e-49 | -8.615850e-47 |
| Msa0081520 | Msa0587940 | 0.807655 | 4.545803e-50 | -8.615850e-47 |
| Msa0089630 | Msa0587940 | 0.800150 | 1.649399e-48 | -8.615850e-47 |
| Msa0094850 | Msa0587940 | 0.838492 | 2.785309e-57 | -8.615850e-47 |
| Msa0110970 | Msa0587940 | 0.813409 | 2.596838e-51 | -8.615850e-47 |
| Msa0114540 | Msa0587940 | -0.810692 | 1.015798e-50 | -8.615850e-47 |
| Msa0115160 | Msa0587940 | 0.820205 | 7.755340e-53 | -8.615850e-47 |
| Msa0118570 | Msa0587940 | 0.827182 | 1.802066e-54 | -8.615850e-47 |
| Msa0123100 | Msa0587940 | 0.826690 | 2.361778e-54 | -8.615850e-47 |
| Msa0124340 | Msa0587940 | 0.814631 | 1.396334e-51 | -8.615850e-47 |
| Msa0130240 | Msa0587940 | 0.815647 | 8.304772e-52 | -8.615850e-47 |
| Msa0134210 | Msa0587940 | 0.800469 | 1.420078e-48 | -8.615850e-47 |
| Msa0143380 | Msa0587940 | 0.800500 | 1.399866e-48 | -8.615850e-47 |
| Msa0146260 | Msa0587940 | 0.809253 | 2.073249e-50 | -8.615850e-47 |
| Msa0152400 | Msa0587940 | 0.802234 | 6.179376e-49 | -8.615850e-47 |
| Msa0157290 | Msa0587940 | 0.821705 | 3.503384e-53 | -8.615850e-47 |
| Msa0173890 | Msa0587940 | 0.814512 | 1.483586e-51 | -8.615850e-47 |
| Msa0182620 | Msa0587940 | -0.800431 | 1.445648e-48 | -8.615850e-47 |
| Msa0197420 | Msa0587940 | 0.809488 | 1.845571e-50 | -8.615850e-47 |
| Msa0197930 | Msa0587940 | 0.807892 | 4.048115e-50 | -8.615850e-47 |
| Msa0201500 | Msa0587940 | 0.807155 | 5.803359e-50 | -8.615850e-47 |
| Msa0205840 | Msa0587940 | 0.832663 | 8.313605e-56 | -8.615850e-47 |
| Msa0222920 | Msa0587940 | 0.811856 | 5.677446e-51 | -8.615850e-47 |
| Msa0225680 | Msa0587940 | 0.808238 | 3.416435e-50 | -8.615850e-47 |
| Msa0366240 | Msa0587940 | 0.810526 | 1.103080e-50 | -8.615850e-47 |
| Msa0369850 | Msa0587940 | 0.801410 | 9.125678e-49 | -8.615850e-47 |
| Msa0378980 | Msa0587940 | 0.801317 | 9.531682e-49 | -8.615850e-47 |
| Msa0388960 | Msa0587940 | 0.811252 | 7.684143e-51 | -8.615850e-47 |
| Msa0392510 | Msa0587940 | 0.814809 | 1.275018e-51 | -8.615850e-47 |
| Msa0410500 | Msa0587940 | 0.815900 | 7.294826e-52 | -8.615850e-47 |
| Msa0410650 | Msa0587940 | 0.811728 | 6.054505e-51 | -8.615850e-47 |
| Msa0417880 | Msa0587940 | 0.818939 | 1.508551e-52 | -8.615850e-47 |
| Msa0422850 | Msa0587940 | 0.818113 | 2.321785e-52 | -8.615850e-47 |
| Msa0422930 | Msa0587940 | 0.815004 | 1.154577e-51 | -8.615850e-47 |
| Msa0423900 | Msa0587940 | 0.807702 | 4.442826e-50 | -8.615850e-47 |
| Msa0436880 | Msa0587940 | 0.807524 | 4.845750e-50 | -8.615850e-47 |
| Msa0438590 | Msa0587940 | 0.802643 | 5.090341e-49 | -8.615850e-47 |
| Msa0447370 | Msa0587940 | 0.826365 | 2.823779e-54 | -8.615850e-47 |
| Msa0452920 | Msa0587940 | 0.801802 | 7.583207e-49 | -8.615850e-47 |
| Msa0452960 | Msa0587940 | 0.809581 | 1.762666e-50 | -8.615850e-47 |
| Msa0467430 | Msa0587940 | 0.829383 | 5.307393e-55 | -8.615850e-47 |
| Msa0475790 | Msa0587940 | 0.803367 | 3.605447e-49 | -8.615850e-47 |
| Msa0239570 | Msa0587940 | 0.807005 | 6.242173e-50 | -8.615850e-47 |
| Msa0243100 | Msa0587940 | 0.807364 | 5.241205e-50 | -8.615850e-47 |
| Msa0248970 | Msa0587940 | 0.832227 | 1.066327e-55 | -8.615850e-47 |
| Msa0264350 | Msa0587940 | 0.811079 | 8.376516e-51 | -8.615850e-47 |
| Msa0274680 | Msa0587940 | 0.821375 | 4.175046e-53 | -8.615850e-47 |
| Msa0276920 | Msa0587940 | 0.816835 | 4.505268e-52 | -8.615850e-47 |
| Msa0287650 | Msa0587940 | 0.809121 | 2.213210e-50 | -8.615850e-47 |
| Msa0299890 | Msa0587940 | 0.808032 | 3.780224e-50 | -8.615850e-47 |
| Msa0300690 | Msa0587940 | 0.808617 | 2.835554e-50 | -8.615850e-47 |
| Msa0305700 | Msa0587940 | 0.804854 | 1.769113e-49 | -8.615850e-47 |
| Msa0316800 | Msa0587940 | 0.816695 | 4.844491e-52 | -8.615850e-47 |
| Msa0316810 | Msa0587940 | 0.822295 | 2.557444e-53 | -8.615850e-47 |
| Msa0317280 | Msa0587940 | 0.806810 | 6.865907e-50 | -8.615850e-47 |
| Msa0333920 | Msa0587940 | 0.803543 | 3.315950e-49 | -8.615850e-47 |
| Msa0334040 | Msa0587940 | 0.811445 | 6.974995e-51 | -8.615850e-47 |
| Msa0334350 | Msa0587940 | 0.817944 | 2.535234e-52 | -8.615850e-47 |
| Msa0345330 | Msa0587940 | 0.802836 | 4.643382e-49 | -8.615850e-47 |
| Msa0495320 | Msa0587940 | 0.822519 | 2.268919e-53 | -8.615850e-47 |
| Msa0507680 | Msa0587940 | 0.808070 | 3.709203e-50 | -8.615850e-47 |
| Msa0509610 | Msa0587940 | 0.804357 | 2.245402e-49 | -8.615850e-47 |
| Msa0513160 | Msa0587940 | 0.834353 | 3.147764e-56 | -8.615850e-47 |
| Msa0527550 | Msa0587940 | 0.814888 | 1.224869e-51 | -8.615850e-47 |
| Msa0527860 | Msa0587940 | 0.805814 | 1.113074e-49 | -8.615850e-47 |
| Msa0574890 | Msa0587940 | 0.842370 | 2.695903e-58 | -8.615850e-47 |
| Msa0587940 | Msa0626450 | 0.811310 | 7.464561e-51 | -8.615850e-47 |
| Msa0587940 | Msa0626490 | 0.813147 | 2.965903e-51 | -8.615850e-47 |
| Msa0587940 | Msa0628360 | 0.866208 | 3.372889e-65 | -8.615850e-47 |
| Msa0587940 | Msa0638480 | 0.800710 | 1.268211e-48 | -8.615850e-47 |
| Msa0587940 | Msa0642720 | 0.826294 | 2.936087e-54 | -8.615850e-47 |
| Msa0587940 | Msa0647130 | 0.824110 | 9.637837e-54 | -8.615850e-47 |
| Msa0587940 | Msa0664600 | 0.815027 | 1.140965e-51 | -8.615850e-47 |
| Msa0587940 | Msa0682330 | 0.818043 | 2.407814e-52 | -8.615850e-47 |
| Msa0587940 | Msa0683510 | 0.819282 | 1.260187e-52 | -8.615850e-47 |
| Msa0587940 | Msa0683570 | 0.809516 | 1.820927e-50 | -8.615850e-47 |
| Msa0587940 | Msa0684500 | 0.804060 | 2.589148e-49 | -8.615850e-47 |
| Msa0587940 | Msa0691050 | 0.816492 | 5.379252e-52 | -8.615850e-47 |
| Msa0587940 | Msa0693380 | 0.804014 | 2.646597e-49 | -8.615850e-47 |
| Msa0587940 | Msa0702340 | 0.834068 | 3.711994e-56 | -8.615850e-47 |
| Msa0587940 | Msa0702570 | 0.804486 | 2.111313e-49 | -8.615850e-47 |
| Msa0587940 | Msa0702590 | 0.844951 | 5.499254e-59 | -8.615850e-47 |
| Msa0587940 | Msa0702660 | 0.833465 | 5.251668e-56 | -8.615850e-47 |
| Msa0587940 | Msa0707470 | 0.802448 | 5.584412e-49 | -8.615850e-47 |
| Msa0587940 | Msa0710270 | 0.804354 | 2.249275e-49 | -8.615850e-47 |
| Msa0587940 | Msa0724000 | 0.808309 | 3.299556e-50 | -8.615850e-47 |
| Msa0587940 | Msa0750880 | 0.817673 | 2.918313e-52 | -8.615850e-47 |
| Msa0587940 | Msa0753340 | 0.805854 | 1.091772e-49 | -8.615850e-47 |
| Msa0587940 | Msa0754520 | 0.815679 | 8.170812e-52 | -8.615850e-47 |
| Msa0587940 | Msa0762210 | 0.800095 | 1.692264e-48 | -8.615850e-47 |
| Msa0587940 | Msa0795390 | 0.806054 | 9.910385e-50 | -8.615850e-47 |
| Msa0587940 | Msa0826130 | 0.802329 | 5.908303e-49 | -8.615850e-47 |
| Msa0587940 | Msa0828920 | 0.801786 | 7.639261e-49 | -8.615850e-47 |
| Msa0587940 | Msa0833220 | 0.818902 | 1.538157e-52 | -8.615850e-47 |
| Msa0587940 | Msa0846140 | 0.806474 | 8.082995e-50 | -8.615850e-47 |
| Msa0587940 | Msa0861510 | 0.810270 | 1.252763e-50 | -8.615850e-47 |
| Msa0587940 | Msa0861530 | 0.805193 | 1.502202e-49 | -8.615850e-47 |
| Msa0587940 | Msa0861600 | 0.811556 | 6.599532e-51 | -8.615850e-47 |
| Msa0587940 | Msa0870550 | 0.801937 | 7.112382e-49 | -8.615850e-47 |
| Msa0587940 | Msa0880140 | 0.819264 | 1.272186e-52 | -8.615850e-47 |
| Msa0587940 | Msa0896970 | 0.824381 | 8.322711e-54 | -8.615850e-47 |
| Msa0587940 | Msa0908050 | 0.827040 | 1.948249e-54 | -8.615850e-47 |
| Msa0587940 | Msa0930780 | 0.848952 | 4.415479e-60 | -8.615850e-47 |
| Msa0587940 | Msa0936340 | 0.819824 | 9.480051e-53 | -8.615850e-47 |
| Msa0587940 | Msa0948290 | 0.821498 | 3.910408e-53 | -8.615850e-47 |
| Msa0587940 | Msa0954550 | 0.809292 | 2.033731e-50 | -8.615850e-47 |
| Msa0587940 | Msa0968670 | 0.804253 | 2.360385e-49 | -8.615850e-47 |
| Msa0587940 | Msa0969520 | 0.824097 | 9.708067e-54 | -8.615850e-47 |
| Msa0587940 | Msa1004010 | 0.805397 | 1.361765e-49 | -8.615850e-47 |
| Msa0587940 | Msa1005870 | 0.807844 | 4.145025e-50 | -8.615850e-47 |
| Msa0587940 | Msa1024740 | 0.821510 | 3.886639e-53 | -8.615850e-47 |
| Msa0587940 | Msa1031930 | 0.803897 | 2.799814e-49 | -8.615850e-47 |
| Msa0587940 | Msa1037920 | 0.845211 | 4.677312e-59 | -8.615850e-47 |
| Msa0587940 | Msa1048920 | 0.802534 | 5.359633e-49 | -8.615850e-47 |
| Msa0587940 | Msa1063950 | 0.801613 | 8.291592e-49 | -8.615850e-47 |
| Msa0587940 | Msa1082700 | 0.801994 | 6.922681e-49 | -8.615850e-47 |
| Msa0587940 | Msa1085200 | 0.807965 | 3.905247e-50 | -8.615850e-47 |
| Msa0587940 | Msa1092010 | 0.810207 | 1.292617e-50 | -8.615850e-47 |
| Msa0587940 | Msa1097640 | 0.836320 | 1.002740e-56 | -8.615850e-47 |
| Msa0587940 | Msa1102770 | 0.806842 | 6.758744e-50 | -8.615850e-47 |
| Msa0587940 | Msa1108790 | 0.806442 | 8.209338e-50 | -8.615850e-47 |
| Msa0587940 | Msa1111110 | 0.802548 | 5.324302e-49 | -8.615850e-47 |
| Msa0587940 | Msa1124110 | 0.803328 | 3.672918e-49 | -8.615850e-47 |
| Msa0587940 | Msa1124310 | 0.802443 | 5.598061e-49 | -8.615850e-47 |
| Msa0587940 | Msa1125940 | 0.809109 | 2.226391e-50 | -8.615850e-47 |
| Msa0587940 | Msa1127890 | 0.812674 | 3.765423e-51 | -8.615850e-47 |
| Msa0587940 | Msa1129980 | 0.841776 | 3.871354e-58 | -8.615850e-47 |
| Msa0587940 | Msa1139810 | 0.817923 | 2.562771e-52 | -8.615850e-47 |
| Msa0587940 | Msa1147900 | 0.802867 | 4.576794e-49 | -8.615850e-47 |
| Msa0587940 | Msa1151910 | 0.830429 | 2.952290e-55 | -8.615850e-47 |
| Msa0587940 | Msa1152510 | 0.824938 | 6.154545e-54 | -8.615850e-47 |
| Msa0587940 | Msa1157870 | 0.813927 | 1.997441e-51 | -8.615850e-47 |
| Msa0587940 | Msa1179940 | 0.815933 | 7.170245e-52 | -8.615850e-47 |
| Msa0587940 | Msa1179970 | 0.812362 | 4.404793e-51 | -8.615850e-47 |
| Msa0587940 | Msa1185540 | 0.808090 | 3.674196e-50 | -8.615850e-47 |
| Msa0587940 | Msa1199570 | 0.815522 | 8.855527e-52 | -8.615850e-47 |
| Msa0587940 | Msa1208160 | 0.801811 | 7.551223e-49 | -8.615850e-47 |
| Msa0587940 | Msa1219580 | 0.803561 | 3.287078e-49 | -8.615850e-47 |
| Msa0587940 | Msa1224830 | 0.806348 | 8.594424e-50 | -8.615850e-47 |
| Msa0587940 | Msa1224840 | 0.843552 | 1.306361e-58 | -8.615850e-47 |
| Msa0587940 | Msa1232710 | 0.805624 | 1.220397e-49 | -8.615850e-47 |
| Msa0587940 | Msa1236100 | 0.807484 | 4.941325e-50 | -8.615850e-47 |
| Msa0587940 | Msa1252190 | 0.829739 | 4.348443e-55 | -8.615850e-47 |
| Msa0587940 | Msa1264710 | 0.801403 | 9.155005e-49 | -8.615850e-47 |
| Msa0587940 | Msa1269480 | 0.800226 | 1.591971e-48 | -8.615850e-47 |
| Msa0587940 | Msa1274060 | 0.814502 | 1.491289e-51 | -8.615850e-47 |
| Msa0587940 | Msa1274280 | 0.803239 | 3.832403e-49 | -8.615850e-47 |
| Msa0587940 | Msa1283990 | 0.831793 | 1.364823e-55 | -8.615850e-47 |
| Msa0587940 | Msa1284040 | 0.828326 | 9.565686e-55 | -8.615850e-47 |
| Msa0587940 | Msa1292830 | 0.809745 | 1.625707e-50 | -8.615850e-47 |
| Msa0587940 | Msa1303250 | 0.830313 | 3.150961e-55 | -8.615850e-47 |
| Msa0587940 | Msa1306850 | 0.811941 | 5.442129e-51 | -8.615850e-47 |
| Msa0587940 | Msa1311960 | 0.811255 | 7.670226e-51 | -8.615850e-47 |
| Msa0587940 | Msa1313150 | 0.805645 | 1.207764e-49 | -8.615850e-47 |
| Msa0587940 | Msa1313300 | 0.804687 | 1.916608e-49 | -8.615850e-47 |
| Msa0587940 | Msa1323050 | 0.813287 | 2.762746e-51 | -8.615850e-47 |
| Msa0587940 | Msa1328640 | 0.801215 | 1.000297e-48 | -8.615850e-47 |
| Msa0587940 | Msa1328710 | 0.812937 | 3.296910e-51 | -8.615850e-47 |
| Msa0587940 | Msa1346370 | 0.810005 | 1.429089e-50 | -8.615850e-47 |
| Msa0587940 | Msa1351450 | 0.815483 | 9.035705e-52 | -8.615850e-47 |
| Msa0587940 | Msa1351760 | 0.809565 | 1.776673e-50 | -8.615850e-47 |
| Msa0587940 | Msa1353060 | 0.817661 | 2.936938e-52 | -8.615850e-47 |
| Msa0587940 | Msa1356830 | 0.800639 | 1.311379e-48 | -8.615850e-47 |
| Msa0587940 | Msa1364470 | -0.803919 | 2.770272e-49 | -8.615850e-47 |
| Msa0587940 | Msa1373330 | 0.807955 | 3.925034e-50 | -8.615850e-47 |
| Msa0587940 | Msa1374040 | 0.803068 | 4.158680e-49 | -8.615850e-47 |
| Msa0587940 | Msa1408620 | -0.804043 | 2.610882e-49 | -8.615850e-47 |
| Msa0587940 | Msa1423880 | 0.812707 | 3.702668e-51 | -8.615850e-47 |
| Msa0587940 | Msa1430240 | 0.802523 | 5.389235e-49 | -8.615850e-47 |
| Msa0587940 | Msa1437460 | 0.832202 | 1.081219e-55 | -8.615850e-47 |
| Msa0587940 | Msa1445190 | 0.836348 | 9.866825e-57 | -8.615850e-47 |
| Msa0587940 | Msa1452120 | 0.802038 | 6.781768e-49 | -8.615850e-47 |
| Msa0587940 | Msa1459180 | 0.829247 | 5.728344e-55 | -8.615850e-47 |
| Msa0587940 | Msa1460020 | 0.805332 | 1.405234e-49 | -8.615850e-47 |
| Msa0587940 | Msa1461300 | 0.807654 | 4.548709e-50 | -8.615850e-47 |
| Msa0587940 | Msa1466460 | 0.802572 | 5.265511e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0587940 | MtrunA17_Chr4g0004181 | 97.191 | 178 | 3 | 1 | 1 | 176 | 1 | 178 | 2.77e-124 | 347 |
| Msa0587940 | MtrunA17_Chr1g0187961 | 48.538 | 171 | 73 | 5 | 6 | 164 | 11 | 178 | 1.54e-46 | 150 |
| Msa0587940 | MtrunA17_Chr1g0184801 | 45.550 | 191 | 73 | 4 | 6 | 165 | 12 | 202 | 1.05e-44 | 146 |
| Msa0587940 | MtrunA17_Chr1g0166011 | 43.956 | 182 | 77 | 4 | 8 | 165 | 3 | 183 | 7.26e-44 | 144 |
| Msa0587940 | MtrunA17_Chr7g0260621 | 45.455 | 187 | 70 | 5 | 11 | 165 | 16 | 202 | 6.23e-43 | 142 |
| Msa0587940 | MtrunA17_Chr1g0184791 | 41.964 | 224 | 62 | 8 | 11 | 170 | 18 | 237 | 1.13e-41 | 140 |
| Msa0587940 | MtrunA17_Chr6g0486121 | 39.076 | 238 | 74 | 9 | 2 | 170 | 11 | 246 | 1.19e-40 | 137 |
| Msa0587940 | MtrunA17_Chr1g0187921 | 40.870 | 230 | 74 | 6 | 1 | 170 | 1 | 228 | 3.15e-40 | 136 |
| Msa0587940 | MtrunA17_Chr5g0428141 | 47.239 | 163 | 53 | 5 | 37 | 170 | 181 | 339 | 3.39e-40 | 139 |
| Msa0587940 | MtrunA17_Chr1g0190711 | 40.343 | 233 | 69 | 7 | 6 | 170 | 15 | 245 | 5.71e-40 | 135 |
| Msa0587940 | MtrunA17_Chr5g0411501 | 49.007 | 151 | 43 | 5 | 52 | 170 | 179 | 327 | 2.16e-38 | 134 |
| Msa0587940 | MtrunA17_Chr2g0331411 | 49.669 | 151 | 42 | 5 | 52 | 170 | 170 | 318 | 5.13e-38 | 132 |
| Msa0587940 | MtrunA17_Chr8g0390281 | 48.667 | 150 | 44 | 5 | 52 | 170 | 138 | 285 | 8.06e-38 | 131 |
| Msa0587940 | MtrunA17_Chr7g0260641 | 47.297 | 148 | 47 | 4 | 52 | 170 | 97 | 242 | 1.19e-37 | 129 |
| Msa0587940 | MtrunA17_Chr8g0366881 | 46.707 | 167 | 53 | 6 | 35 | 170 | 179 | 340 | 1.62e-37 | 132 |
| Msa0587940 | MtrunA17_Chr2g0332141 | 44.037 | 109 | 48 | 2 | 76 | 171 | 8 | 116 | 9.38e-27 | 98.2 |
| Msa0587940 | MtrunA17_Chr1g0183251 | 31.443 | 194 | 67 | 4 | 47 | 174 | 75 | 268 | 4.79e-25 | 97.8 |
| Msa0587940 | MtrunA17_Chr2g0330951 | 31.098 | 164 | 61 | 2 | 55 | 166 | 97 | 260 | 7.43e-23 | 91.7 |
| Msa0587940 | MtrunA17_Chr8g0340731 | 32.704 | 159 | 60 | 3 | 55 | 166 | 108 | 266 | 3.68e-21 | 87.4 |
| Msa0587940 | MtrunA17_Chr1g0193861 | 45.833 | 96 | 47 | 2 | 73 | 164 | 82 | 176 | 2.71e-20 | 83.2 |
| Msa0587940 | MtrunA17_Chr7g0270851 | 41.053 | 95 | 51 | 2 | 73 | 163 | 67 | 160 | 5.93e-18 | 76.6 |
| Msa0587940 | MtrunA17_Chr4g0064131 | 33.582 | 134 | 64 | 4 | 44 | 157 | 77 | 205 | 1.33e-17 | 76.6 |
| Msa0587940 | MtrunA17_Chr4g0069561 | 38.938 | 113 | 61 | 4 | 52 | 157 | 69 | 180 | 3.06e-17 | 75.1 |
| Msa0587940 | MtrunA17_Chr3g0137601 | 30.233 | 172 | 91 | 5 | 4 | 157 | 46 | 206 | 4.44e-15 | 70.1 |
| Msa0587940 | MtrunA17_Chr1g0209181 | 35.833 | 120 | 63 | 4 | 53 | 159 | 52 | 170 | 7.63e-14 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0587940 | AT3G15540.1 | 59.794 | 194 | 54 | 6 | 1 | 170 | 1 | 194 | 4.49e-68 | 206 |
| Msa0587940 | AT1G52830.1 | 56.614 | 189 | 58 | 7 | 1 | 167 | 1 | 187 | 1.80e-61 | 189 |
| Msa0587940 | AT1G15580.1 | 57.803 | 173 | 53 | 7 | 1 | 163 | 1 | 163 | 3.27e-50 | 159 |
| Msa0587940 | AT5G43700.1 | 50.575 | 174 | 74 | 3 | 4 | 165 | 9 | 182 | 1.27e-47 | 153 |
| Msa0587940 | AT1G04240.1 | 48.370 | 184 | 73 | 4 | 4 | 165 | 3 | 186 | 2.86e-46 | 150 |
| Msa0587940 | AT1G04240.2 | 48.370 | 184 | 73 | 4 | 4 | 165 | 103 | 286 | 4.66e-46 | 152 |
| Msa0587940 | AT3G04730.1 | 42.795 | 229 | 65 | 8 | 6 | 170 | 2 | 228 | 9.82e-42 | 140 |
| Msa0587940 | AT3G23030.1 | 49.123 | 171 | 66 | 5 | 6 | 164 | 9 | 170 | 1.04e-40 | 135 |
| Msa0587940 | AT3G23030.2 | 49.123 | 171 | 66 | 5 | 6 | 164 | 96 | 257 | 4.39e-40 | 136 |
| Msa0587940 | AT4G14550.2 | 42.268 | 194 | 75 | 5 | 3 | 165 | 30 | 217 | 2.22e-39 | 134 |
| Msa0587940 | AT4G14550.1 | 41.709 | 199 | 77 | 6 | 3 | 170 | 30 | 220 | 3.55e-39 | 133 |
| Msa0587940 | AT4G29080.1 | 47.468 | 158 | 41 | 4 | 52 | 169 | 141 | 296 | 8.63e-38 | 132 |
| Msa0587940 | AT1G04250.1 | 43.077 | 195 | 80 | 7 | 3 | 170 | 31 | 221 | 8.90e-38 | 130 |
| Msa0587940 | AT2G22670.5 | 48.630 | 146 | 43 | 4 | 52 | 165 | 163 | 308 | 1.19e-37 | 132 |
| Msa0587940 | AT2G22670.2 | 48.630 | 146 | 43 | 4 | 52 | 165 | 163 | 308 | 1.19e-37 | 132 |
| Msa0587940 | AT3G23050.1 | 39.394 | 231 | 72 | 7 | 6 | 170 | 6 | 234 | 1.78e-37 | 129 |
| Msa0587940 | AT4G14560.1 | 48.765 | 162 | 75 | 4 | 5 | 161 | 6 | 164 | 6.68e-37 | 125 |
| Msa0587940 | AT2G22670.3 | 48.322 | 149 | 43 | 5 | 52 | 168 | 163 | 309 | 6.99e-37 | 130 |
| Msa0587940 | AT2G22670.1 | 48.322 | 149 | 43 | 5 | 52 | 168 | 163 | 309 | 6.99e-37 | 130 |
| Msa0587940 | AT2G22670.4 | 48.322 | 149 | 43 | 5 | 52 | 168 | 180 | 326 | 9.48e-37 | 130 |
| Msa0587940 | AT5G65670.1 | 48.667 | 150 | 46 | 4 | 52 | 170 | 181 | 330 | 1.97e-36 | 129 |
| Msa0587940 | AT5G65670.2 | 49.333 | 150 | 43 | 5 | 52 | 170 | 181 | 328 | 1.46e-35 | 127 |
| Msa0587940 | AT2G33310.3 | 38.125 | 160 | 54 | 5 | 51 | 165 | 72 | 231 | 1.60e-27 | 103 |
| Msa0587940 | AT2G33310.1 | 38.125 | 160 | 54 | 5 | 51 | 165 | 72 | 231 | 1.60e-27 | 103 |
| Msa0587940 | AT2G33310.2 | 37.126 | 167 | 60 | 5 | 44 | 165 | 66 | 232 | 1.84e-27 | 103 |
| Msa0587940 | AT4G14550.3 | 38.372 | 172 | 69 | 5 | 3 | 143 | 30 | 195 | 2.00e-27 | 102 |
| Msa0587940 | AT4G28640.3 | 38.788 | 165 | 58 | 4 | 44 | 165 | 78 | 242 | 2.18e-27 | 103 |
| Msa0587940 | AT4G28640.1 | 38.650 | 163 | 57 | 4 | 44 | 163 | 78 | 240 | 5.15e-27 | 102 |
| Msa0587940 | AT4G28640.2 | 38.037 | 163 | 58 | 3 | 44 | 163 | 78 | 240 | 1.58e-26 | 102 |
| Msa0587940 | AT3G23050.2 | 36.098 | 205 | 65 | 6 | 6 | 144 | 6 | 210 | 7.76e-26 | 98.6 |
| Msa0587940 | AT5G25890.1 | 34.884 | 172 | 89 | 6 | 12 | 169 | 8 | 170 | 1.76e-25 | 96.7 |
| Msa0587940 | AT1G04550.2 | 34.591 | 159 | 60 | 3 | 51 | 165 | 66 | 224 | 1.39e-23 | 93.6 |
| Msa0587940 | AT3G16500.1 | 37.584 | 149 | 50 | 4 | 55 | 160 | 104 | 252 | 3.63e-22 | 90.5 |
| Msa0587940 | AT1G51950.1 | 34.839 | 155 | 51 | 3 | 55 | 160 | 97 | 250 | 4.07e-22 | 90.1 |
| Msa0587940 | AT3G16500.2 | 37.584 | 149 | 50 | 4 | 55 | 160 | 104 | 252 | 4.26e-22 | 90.1 |
| Msa0587940 | AT3G17600.1 | 38.889 | 108 | 57 | 2 | 58 | 157 | 48 | 154 | 2.16e-21 | 85.9 |
| Msa0587940 | AT3G62100.1 | 45.055 | 91 | 47 | 1 | 70 | 157 | 78 | 168 | 6.64e-21 | 84.7 |
| Msa0587940 | AT2G46990.1 | 43.956 | 91 | 48 | 1 | 70 | 157 | 80 | 170 | 2.87e-20 | 83.2 |
| Msa0587940 | AT1G04100.1 | 31.579 | 171 | 59 | 4 | 52 | 165 | 91 | 260 | 1.07e-18 | 80.9 |
| Msa0587940 | AT3G62100.2 | 44.872 | 78 | 40 | 1 | 70 | 144 | 78 | 155 | 2.76e-15 | 69.7 |
| Msa0587940 | AT2G46990.2 | 44.872 | 78 | 40 | 1 | 70 | 144 | 80 | 157 | 4.63e-15 | 69.3 |
| Msa0587940 | AT2G01200.2 | 38.614 | 101 | 58 | 2 | 64 | 161 | 88 | 187 | 5.10e-15 | 69.7 |
| Msa0587940 | AT2G01200.1 | 38.614 | 101 | 58 | 2 | 64 | 161 | 88 | 187 | 5.10e-15 | 69.7 |
| Msa0587940 | AT4G14550.4 | 35.659 | 129 | 62 | 4 | 3 | 116 | 30 | 152 | 6.10e-15 | 69.3 |
| Msa0587940 | AT1G15050.2 | 42.857 | 98 | 49 | 3 | 70 | 161 | 53 | 149 | 1.18e-14 | 68.2 |
| Msa0587940 | AT1G15050.1 | 42.857 | 98 | 49 | 3 | 70 | 161 | 85 | 181 | 4.58e-14 | 67.4 |
| Msa0587940 | AT3G23050.3 | 33.974 | 156 | 53 | 5 | 6 | 111 | 6 | 161 | 3.85e-13 | 64.3 |
| Msa0587940 | AT1G80390.1 | 36.449 | 107 | 56 | 3 | 11 | 109 | 19 | 121 | 4.13e-13 | 63.5 |
| Msa0587940 | AT4G32280.2 | 35.632 | 87 | 46 | 2 | 75 | 157 | 118 | 198 | 5.49e-12 | 62.0 |
| Msa0587940 | AT4G32280.1 | 29.032 | 155 | 59 | 5 | 50 | 157 | 90 | 240 | 1.11e-11 | 61.6 |
Find 67 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAACCTTCATGTACATTT+TGG | 0.155014 | 4_2:+10021662 | None:intergenic |
| TCTCAAGATGTAAGAAAATA+AGG | 0.163085 | 4_2:+10021987 | None:intergenic |
| ACCATCTTTGTCCTCATAAA+TGG | 0.166743 | 4_2:+10019387 | None:intergenic |
| AGATCAGATGCAAAGGGTTT+TGG | 0.274758 | 4_2:-10018017 | Msa0587940:CDS |
| CTCTTTGGTTGTTGTGGAAT+TGG | 0.284623 | 4_2:-10021558 | Msa0587940:intron |
| TTGGCTTTGGAGAAGCTCTT+TGG | 0.296767 | 4_2:-10021573 | Msa0587940:CDS |
| TTTATTTATGAAAGATATAT+AGG | 0.311538 | 4_2:-10017778 | Msa0587940:three_prime_UTR |
| AATCTCTTTAAAGATCCTTT+TGG | 0.324461 | 4_2:+10017987 | None:intergenic |
| CTTCATTCATGTTCTTCTTC+CGG | 0.340312 | 4_2:+10021688 | None:intergenic |
| ATTGATCTTGATTTGCATAA+GGG | 0.341876 | 4_2:-10021612 | Msa0587940:CDS |
| GACGGTGGTGGGGAAGAAAA+TGG | 0.343003 | 4_2:-10021777 | Msa0587940:CDS |
| TTTAAAGAGATTCATATAGA+AGG | 0.353790 | 4_2:-10017976 | Msa0587940:exon |
| CTTGGAGTTAGCTTTGGCTT+TGG | 0.358485 | 4_2:-10021586 | Msa0587940:CDS |
| CTCAAGATGTAAGAAAATAA+GGG | 0.368551 | 4_2:+10021988 | None:intergenic |
| GATATATGAAATATGAATCT+AGG | 0.380273 | 4_2:-10017824 | Msa0587940:three_prime_UTR |
| GGGATACTTGGAGTTAGCTT+TGG | 0.382944 | 4_2:-10021592 | Msa0587940:CDS |
| TATATCAAACTATAGTATAA+AGG | 0.393817 | 4_2:+10017841 | None:intergenic |
| TGATTTGCATAAGGGATACT+TGG | 0.403390 | 4_2:-10021604 | Msa0587940:CDS |
| GATTGATCTTGATTTGCATA+AGG | 0.421159 | 4_2:-10021613 | Msa0587940:CDS |
| TTCTCCGAGATTGACGGTGG+TGG | 0.434086 | 4_2:-10021789 | Msa0587940:CDS |
| TGAACACGTTCCCATTTATG+AGG | 0.437761 | 4_2:-10019398 | Msa0587940:CDS |
| GTTGACAGAGGAAGCGTTGA+AGG | 0.440080 | 4_2:-10019434 | Msa0587940:intron |
| TGCTGGTTGGAGATGTCCCT+TGG | 0.448462 | 4_2:-10019357 | Msa0587940:CDS |
| CCATCTTTGTCCTCATAAAT+GGG | 0.453303 | 4_2:+10019388 | None:intergenic |
| AAAATGGCAAGAGAAGGTTT+TGG | 0.457566 | 4_2:-10021882 | Msa0587940:CDS |
| TACATGAAGGTTAGCATGGA+TGG | 0.465918 | 4_2:-10021654 | Msa0587940:CDS |
| AGAGATTCATATAGAAGGCT+TGG | 0.466045 | 4_2:-10017971 | Msa0587940:exon |
| GATGTAAGAAAATAAGGGCT+TGG | 0.470723 | 4_2:+10021993 | None:intergenic |
| AGATCAATCTTACGCAAGTA+AGG | 0.472170 | 4_2:+10021627 | None:intergenic |
| CCCATTTATGAGGACAAAGA+TGG | 0.472932 | 4_2:-10019388 | Msa0587940:CDS |
| GGGGAAGAAAATGGAGGTTC+CGG | 0.474162 | 4_2:-10021768 | Msa0587940:CDS |
| TGAAATAACCGAGCTAAGGT+TGG | 0.475513 | 4_2:-10021856 | Msa0587940:CDS |
| TTGAATCATGCAAAAGGCTA+AGG | 0.476919 | 4_2:-10018049 | Msa0587940:CDS |
| TTCCCCACCACCGTCAATCT+CGG | 0.483364 | 4_2:+10021785 | None:intergenic |
| AGGGTTGGAATATTTGATGA+AGG | 0.491208 | 4_2:+10021947 | None:intergenic |
| GAAATAACCGAGCTAAGGTT+GGG | 0.491688 | 4_2:-10021855 | Msa0587940:CDS |
| CACAAAAGAATGAGAAGAAG+AGG | 0.493979 | 4_2:-10021815 | Msa0587940:CDS |
| GAGAAGCTCTTTGGTTGTTG+TGG | 0.496959 | 4_2:-10021564 | Msa0587940:CDS |
| TCAAGTTGTGGGATGGCCTC+CGG | 0.501026 | 4_2:-10021721 | Msa0587940:CDS |
| TGTTTATTGAATCATGCAAA+AGG | 0.519251 | 4_2:-10018055 | Msa0587940:CDS |
| GGCCTCCGGTGTGTTCGTAC+CGG | 0.521502 | 4_2:-10021707 | Msa0587940:CDS |
| GAGAAGAAGAATCAAGTTGT+GGG | 0.526986 | 4_2:-10021732 | Msa0587940:CDS |
| AACTACTTCTCTTCAATCAA+AGG | 0.529459 | 4_2:+10017696 | None:intergenic |
| GACTTGAAATAACCGAGCTA+AGG | 0.530961 | 4_2:-10021860 | Msa0587940:CDS |
| GCTGGTTGGAGATGTCCCTT+GGG | 0.536668 | 4_2:-10019356 | Msa0587940:CDS |
| ATGAAGAGATCAGATGCAAA+GGG | 0.538721 | 4_2:-10018023 | Msa0587940:CDS |
| CGAGAAGAAGAATCAAGTTG+TGG | 0.541598 | 4_2:-10021733 | Msa0587940:CDS |
| AAAGTTAAAATGGCAAGAGA+AGG | 0.543827 | 4_2:-10021888 | Msa0587940:exon |
| TCTCCGAGATTGACGGTGGT+GGG | 0.547621 | 4_2:-10021788 | Msa0587940:CDS |
| AATGTACATGAAGGTTAGCA+TGG | 0.555207 | 4_2:-10021658 | Msa0587940:CDS |
| CTCCGAGATTGACGGTGGTG+GGG | 0.555531 | 4_2:-10021787 | Msa0587940:CDS |
| CGGAAGAAGAACATGAATGA+AGG | 0.561173 | 4_2:-10021687 | Msa0587940:CDS |
| ATGAGGACAAAGATGGTGAC+TGG | 0.580465 | 4_2:-10019381 | Msa0587940:CDS |
| TATGAAGAGATCAGATGCAA+AGG | 0.587250 | 4_2:-10018024 | Msa0587940:CDS |
| CAAAGATGGTGACTGGATGC+TGG | 0.588150 | 4_2:-10019374 | Msa0587940:CDS |
| AGGTTCCAAAATGTACATGA+AGG | 0.605148 | 4_2:-10021667 | Msa0587940:CDS |
| AGGATGTTCTCCGAGATTGA+CGG | 0.605899 | 4_2:-10021795 | Msa0587940:CDS |
| GATGGTGACTGGATGCTGGT+TGG | 0.609564 | 4_2:-10019370 | Msa0587940:CDS |
| AGAAGAATCAAGTTGTGGGA+TGG | 0.612662 | 4_2:-10021728 | Msa0587940:CDS |
| TGGCAAACCCAACCTTAGCT+CGG | 0.615913 | 4_2:+10021848 | None:intergenic |
| CCAGAAGGACTTACTCCCAA+GGG | 0.657435 | 4_2:+10019341 | None:intergenic |
| GCCAGAAGGACTTACTCCCA+AGG | 0.663285 | 4_2:+10019340 | None:intergenic |
| TTCTTCCGGTACGAACACAC+CGG | 0.663449 | 4_2:+10021702 | None:intergenic |
| CTAAGGTTGGGTTTGCCATG+TGG | 0.667720 | 4_2:-10021843 | Msa0587940:CDS |
| ATGTTCTCCGAGATTGACGG+TGG | 0.674253 | 4_2:-10021792 | Msa0587940:CDS |
| TTCCGGTACGAACACACCGG+AGG | 0.690475 | 4_2:+10021705 | None:intergenic |
| GGTGGTGGGGAAGAAAATGG+AGG | 0.722880 | 4_2:-10021774 | Msa0587940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTAAAATTTATTAAAAA+TGG | + | chr4_2:10019188-10019207 | None:intergenic | 0.0% |
| !! | ATAAAAATTAAATTAAATTT+AGG | - | chr4_2:10021187-10021206 | Msa0587940:intron | 0.0% |
| !! | TAAAAATTAAATTAAATTTA+GGG | - | chr4_2:10021188-10021207 | Msa0587940:intron | 0.0% |
| !!! | AGAATCTTTAATTTTTATAA+AGG | - | chr4_2:10019462-10019481 | Msa0587940:intron | 10.0% |
| !! | ATTATAATCAAGTTTATTAA+GGG | + | chr4_2:10019674-10019693 | None:intergenic | 10.0% |
| !! | TTAATAAACTTGATTATAAT+CGG | - | chr4_2:10019674-10019693 | Msa0587940:intron | 10.0% |
| !! | AAATAAATTGATAGAATTTA+CGG | + | chr4_2:10020019-10020038 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTATCTCTAATTT+TGG | + | chr4_2:10020384-10020403 | None:intergenic | 10.0% |
| !! | GAGATAAAAAAAAATAAAAT+TGG | - | chr4_2:10020390-10020409 | Msa0587940:intron | 10.0% |
| !!! | TATTTACATACATATTTTTT+GGG | - | chr4_2:10020441-10020460 | Msa0587940:intron | 10.0% |
| !!! | TGTCTTTTTAATATATTTTT+AGG | - | chr4_2:10021708-10021727 | Msa0587940:CDS | 10.0% |
| !! | TTTATTTATGAAAGATATAT+AGG | - | chr4_2:10021805-10021824 | Msa0587940:CDS | 10.0% |
| !!! | TTTTTTTTTTCTTCTTCTTA+GGG | + | chr4_2:10017658-10017677 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTCTTCTTCTT+AGG | + | chr4_2:10017659-10017678 | None:intergenic | 15.0% |
| !!! | CCATTTTAACTTTTATTTTT+TGG | + | chr4_2:10017688-10017707 | None:intergenic | 15.0% |
| !! | CCAAAAAATAAAAGTTAAAA+TGG | - | chr4_2:10017685-10017704 | Msa0587940:three_prime_UTR | 15.0% |
| !!! | AATTGTGTTTTTTTATGTAT+AGG | - | chr4_2:10018190-10018209 | Msa0587940:intron | 15.0% |
| !!! | ATTGTGTTTTTTTATGTATA+GGG | - | chr4_2:10018191-10018210 | Msa0587940:intron | 15.0% |
| !!! | GATCCAATAAATTTTAAAAA+CGG | - | chr4_2:10019143-10019162 | Msa0587940:intron | 15.0% |
| !!! | ATCCAATAAATTTTAAAAAC+GGG | - | chr4_2:10019144-10019163 | Msa0587940:intron | 15.0% |
| !! | AAATTTATTAAAAATGGCAA+GGG | + | chr4_2:10019182-10019201 | None:intergenic | 15.0% |
| !! | AAAATTTATTAAAAATGGCA+AGG | + | chr4_2:10019183-10019202 | None:intergenic | 15.0% |
| !!! | TTTTATAATACTGAAAAAAG+AGG | + | chr4_2:10019226-10019245 | None:intergenic | 15.0% |
| !! | GATTATAATCAAGTTTATTA+AGG | + | chr4_2:10019675-10019694 | None:intergenic | 15.0% |
| !! | AACTTTATTCAAAAGAAAAA+AGG | - | chr4_2:10019713-10019732 | Msa0587940:intron | 15.0% |
| !!! | GAACAAAAGTATTAATTTAA+GGG | + | chr4_2:10020115-10020134 | None:intergenic | 15.0% |
| !!! | TGAACAAAAGTATTAATTTA+AGG | + | chr4_2:10020116-10020135 | None:intergenic | 15.0% |
| !!! | ATTTTTTTAGTAATGATAGA+AGG | + | chr4_2:10020348-10020367 | None:intergenic | 15.0% |
| !!! | CTATTTACATACATATTTTT+TGG | - | chr4_2:10020440-10020459 | Msa0587940:intron | 15.0% |
| !! | ACTTCTATAAAAATTTATGT+AGG | - | chr4_2:10020659-10020678 | Msa0587940:intron | 15.0% |
| !!! | GATAACATTTTAAACTTTTA+AGG | + | chr4_2:10021298-10021317 | None:intergenic | 15.0% |
| !! | TATATCAAACTATAGTATAA+AGG | + | chr4_2:10021745-10021764 | None:intergenic | 15.0% |
| !!! | ATTTTGAGATATTAAACTAT+TGG | + | chr4_2:10021957-10021976 | None:intergenic | 15.0% |
| !!! | CATCTTAGTCTTATTATATA+TGG | - | chr4_2:10018081-10018100 | Msa0587940:intron | 20.0% |
| !!! | TTAGTAGTTATATTAGCTTT+CGG | - | chr4_2:10018257-10018276 | Msa0587940:intron | 20.0% |
| !!! | AGTTTTAAGAAAGAGATTTT+GGG | + | chr4_2:10018290-10018309 | None:intergenic | 20.0% |
| !! | ATTTATAGTATACAGTTTGA+AGG | + | chr4_2:10018313-10018332 | None:intergenic | 20.0% |
| !!! | TCTTTGTGATATATAGTTTT+TGG | + | chr4_2:10018633-10018652 | None:intergenic | 20.0% |
| !! | ACTAACTACTTTAGTATTAA+GGG | + | chr4_2:10019103-10019122 | None:intergenic | 20.0% |
| !!! | AACCCGTTTTTAAAATTTAT+TGG | + | chr4_2:10019149-10019168 | None:intergenic | 20.0% |
| !! | AATTTATTAAAAATGGCAAG+GGG | + | chr4_2:10019181-10019200 | None:intergenic | 20.0% |
| !! | TGCTTTATATATGTTAGTTA+AGG | - | chr4_2:10019395-10019414 | Msa0587940:CDS | 20.0% |
| !! | TTATTGTTATACATTCTACT+TGG | + | chr4_2:10019514-10019533 | None:intergenic | 20.0% |
| !! | CTTAATTATATGTCATTAAG+AGG | + | chr4_2:10019601-10019620 | None:intergenic | 20.0% |
| !! | TTTATTCAAAAGAAAAAAGG+AGG | - | chr4_2:10019716-10019735 | Msa0587940:intron | 20.0% |
| !!! | TAGTGTTTGAAATTAAACTA+AGG | - | chr4_2:10019788-10019807 | Msa0587940:intron | 20.0% |
| !!! | TAATTAAAATTTGTTGACAG+AGG | - | chr4_2:10020137-10020156 | Msa0587940:intron | 20.0% |
| !!! | GTGAAAATCAAATTCTTTTT+TGG | - | chr4_2:10020685-10020704 | Msa0587940:intron | 20.0% |
| !!! | TCTAAAATTTTGGTGTTTTA+AGG | - | chr4_2:10021010-10021029 | Msa0587940:intron | 20.0% |
| !! | CAAGAAAAAAATTTCACATT+TGG | + | chr4_2:10021257-10021276 | None:intergenic | 20.0% |
| !!! | AAAATACTACTACTTTAAAG+TGG | - | chr4_2:10021431-10021450 | Msa0587940:intron | 20.0% |
| !! | TTTGTGATGTTAAAAAAAAC+AGG | - | chr4_2:10021504-10021523 | Msa0587940:intron | 20.0% |
| !! | TTTAAAGAGATTCATATAGA+AGG | - | chr4_2:10021607-10021626 | Msa0587940:CDS | 20.0% |
| !! | GATATATGAAATATGAATCT+AGG | - | chr4_2:10021759-10021778 | Msa0587940:CDS | 20.0% |
| ! | CTCAAGATGTAAGAAAATAA+GGG | + | chr4_2:10017598-10017617 | None:intergenic | 25.0% |
| ! | TCTCAAGATGTAAGAAAATA+AGG | + | chr4_2:10017599-10017618 | None:intergenic | 25.0% |
| !!! | ATTGATCTTGATTTGCATAA+GGG | - | chr4_2:10017971-10017990 | Msa0587940:exon | 25.0% |
| ! | TGATATGCATGCAAATATTT+AGG | - | chr4_2:10018128-10018147 | Msa0587940:intron | 25.0% |
| ! | GATATGCATGCAAATATTTA+GGG | - | chr4_2:10018129-10018148 | Msa0587940:intron | 25.0% |
| ! | TTCTTGTTGAAGAGATATAT+AGG | - | chr4_2:10018219-10018238 | Msa0587940:intron | 25.0% |
| !!! | GAGTTTTAAGAAAGAGATTT+TGG | + | chr4_2:10018291-10018310 | None:intergenic | 25.0% |
| ! | TAAATTCTAGTATAGATGCA+AGG | - | chr4_2:10018328-10018347 | Msa0587940:intron | 25.0% |
| ! | AATAATCGCAACTATAATGA+TGG | + | chr4_2:10018397-10018416 | None:intergenic | 25.0% |
| ! | TTAGTTAAAGATTGCAATGA+CGG | + | chr4_2:10018763-10018782 | None:intergenic | 25.0% |
| ! | AAACTCAATTAACATGGTAT+AGG | + | chr4_2:10018786-10018805 | None:intergenic | 25.0% |
| ! | TATACCATGTTAATTGAGTT+TGG | - | chr4_2:10018785-10018804 | Msa0587940:intron | 25.0% |
| ! | CACTAACTACTTTAGTATTA+AGG | + | chr4_2:10019104-10019123 | None:intergenic | 25.0% |
| !!! | ATTTTAAAAACGGGTTCTAA+TGG | - | chr4_2:10019153-10019172 | Msa0587940:intron | 25.0% |
| !! | CGTTTAGAATATCAAAGAAA+TGG | + | chr4_2:10019302-10019321 | None:intergenic | 25.0% |
| ! | AGATATTATAGTGCAACATA+AGG | - | chr4_2:10019432-10019451 | Msa0587940:intron | 25.0% |
| ! | TTTATAAAGGTCCTAGAAAA+AGG | - | chr4_2:10019475-10019494 | Msa0587940:intron | 25.0% |
| ! | TTATAAAGGTCCTAGAAAAA+GGG | - | chr4_2:10019476-10019495 | Msa0587940:intron | 25.0% |
| ! | GGGCAAAAAGAAATAATAAT+AGG | - | chr4_2:10019760-10019779 | Msa0587940:intron | 25.0% |
| ! | AAATGTTAAAATGTGCTCTT+AGG | - | chr4_2:10019812-10019831 | Msa0587940:intron | 25.0% |
| ! | AATGTTAAAATGTGCTCTTA+GGG | - | chr4_2:10019813-10019832 | Msa0587940:intron | 25.0% |
| ! | ATATGGAGAAATAAGATGTT+CGG | + | chr4_2:10019939-10019958 | None:intergenic | 25.0% |
| !! | AAGCTCACACATTTTAAATA+TGG | + | chr4_2:10019956-10019975 | None:intergenic | 25.0% |
| !!! | TTTTTTGTCAAGTAGTTTAG+TGG | + | chr4_2:10019982-10020001 | None:intergenic | 25.0% |
| ! | AATAGAATGAGCTAAGAAAT+GGG | + | chr4_2:10020268-10020287 | None:intergenic | 25.0% |
| ! | AAATAGAATGAGCTAAGAAA+TGG | + | chr4_2:10020269-10020288 | None:intergenic | 25.0% |
| ! | ATCCACTTTAATGGTAAAAT+TGG | + | chr4_2:10020419-10020438 | None:intergenic | 25.0% |
| !!! | ATTACTCTATTAGTCTTGAA+AGG | + | chr4_2:10020469-10020488 | None:intergenic | 25.0% |
| ! | GTTGAAAACATTATGTGTTA+AGG | - | chr4_2:10020572-10020591 | Msa0587940:intron | 25.0% |
| !! | AATTTTATGTACACACACAT+TGG | - | chr4_2:10020715-10020734 | Msa0587940:intron | 25.0% |
| ! | TTCAACATATTATAAAGAGG+GGG | + | chr4_2:10020766-10020785 | None:intergenic | 25.0% |
| ! | GTTCAACATATTATAAAGAG+GGG | + | chr4_2:10020767-10020786 | None:intergenic | 25.0% |
| ! | GGTTCAACATATTATAAAGA+GGG | + | chr4_2:10020768-10020787 | None:intergenic | 25.0% |
| ! | ATGGAAACATCAAAATAAAG+AGG | - | chr4_2:10020860-10020879 | Msa0587940:intron | 25.0% |
| ! | TGGAAACATCAAAATAAAGA+GGG | - | chr4_2:10020861-10020880 | Msa0587940:intron | 25.0% |
| ! | GAAAAAGTTCCTATATTTCA+TGG | + | chr4_2:10020919-10020938 | None:intergenic | 25.0% |
| ! | TGTTTATTGAATCATGCAAA+AGG | - | chr4_2:10021528-10021547 | Msa0587940:intron | 25.0% |
| !!! | AATCTCTTTAAAGATCCTTT+TGG | + | chr4_2:10021599-10021618 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTCTTCTTAGGGT+TGG | + | chr4_2:10017654-10017673 | None:intergenic | 30.0% |
| AAAGTTAAAATGGCAAGAGA+AGG | - | chr4_2:10017695-10017714 | Msa0587940:three_prime_UTR | 30.0% | |
| !! | GATTGATCTTGATTTGCATA+AGG | - | chr4_2:10017970-10017989 | Msa0587940:exon | 30.0% |
| AGATCCAAACTCAATTAACA+TGG | + | chr4_2:10018792-10018811 | None:intergenic | 30.0% | |
| GTGACTCAATATAACCTATA+TGG | - | chr4_2:10018835-10018854 | Msa0587940:intron | 30.0% | |
| ! | CTTTTATATGTGCACCATAT+AGG | + | chr4_2:10018852-10018871 | None:intergenic | 30.0% |
| TGAGTCACATATTATGTTCT+TGG | + | chr4_2:10018876-10018895 | None:intergenic | 30.0% | |
| !! | TTTTGGAAAGTCAAGATTGA+AGG | + | chr4_2:10018914-10018933 | None:intergenic | 30.0% |
| ! | TATGGTGCACATGTTTATTT+TGG | + | chr4_2:10018931-10018950 | None:intergenic | 30.0% |
| TAAACATGTGCACCATATAT+AGG | - | chr4_2:10018934-10018953 | Msa0587940:intron | 30.0% | |
| TTGCACTATAATATCTACCT+GGG | + | chr4_2:10019428-10019447 | None:intergenic | 30.0% | |
| ACATTCTCCTCATTATTTGA+TGG | - | chr4_2:10019538-10019557 | Msa0587940:intron | 30.0% | |
| TTCAAAAGAAAAAAGGAGGA+TGG | - | chr4_2:10019720-10019739 | Msa0587940:intron | 30.0% | |
| GACAATGCATAATATATGCA+GGG | - | chr4_2:10019898-10019917 | Msa0587940:intron | 30.0% | |
| ACAATGCATAATATATGCAG+GGG | - | chr4_2:10019899-10019918 | Msa0587940:intron | 30.0% | |
| TATGGAGAAATAAGATGTTC+GGG | + | chr4_2:10019938-10019957 | None:intergenic | 30.0% | |
| CATGCTAAAGACACATATTA+GGG | + | chr4_2:10020091-10020110 | None:intergenic | 30.0% | |
| ! | CACCAATTTTACCATTAAAG+TGG | - | chr4_2:10020414-10020433 | Msa0587940:intron | 30.0% |
| GTAAATAGCATCCACTTTAA+TGG | + | chr4_2:10020428-10020447 | None:intergenic | 30.0% | |
| ACTTAGCTCACAAGTATTTA+TGG | + | chr4_2:10020516-10020535 | None:intergenic | 30.0% | |
| ! | AATCAAAGTTAGTACTGGAT+AGG | + | chr4_2:10020541-10020560 | None:intergenic | 30.0% |
| ! | TAACTTTGATTTCGTGCATA+TGG | - | chr4_2:10020550-10020569 | Msa0587940:intron | 30.0% |
| GGGTTCAACATATTATAAAG+AGG | + | chr4_2:10020769-10020788 | None:intergenic | 30.0% | |
| ATATGTTGAACCCATCAATT+AGG | - | chr4_2:10020776-10020795 | Msa0587940:intron | 30.0% | |
| ATTTCTCCTTCCTAATTGAT+GGG | + | chr4_2:10020789-10020808 | None:intergenic | 30.0% | |
| TATTTCTCCTTCCTAATTGA+TGG | + | chr4_2:10020790-10020809 | None:intergenic | 30.0% | |
| GGAGAAATAATCAAATGTCA+TGG | - | chr4_2:10020801-10020820 | Msa0587940:intron | 30.0% | |
| AAAGCCATTATTGTGTTAGA+TGG | - | chr4_2:10020841-10020860 | Msa0587940:intron | 30.0% | |
| GTTTCCATCTAACACAATAA+TGG | + | chr4_2:10020848-10020867 | None:intergenic | 30.0% | |
| GGAAACATCAAAATAAAGAG+GGG | - | chr4_2:10020862-10020881 | Msa0587940:intron | 30.0% | |
| GAAACATCAAAATAAAGAGG+GGG | - | chr4_2:10020863-10020882 | Msa0587940:intron | 30.0% | |
| TTTCATGGACATGTCATTAT+AGG | + | chr4_2:10020904-10020923 | None:intergenic | 30.0% | |
| ATGACATGTCCATGAAATAT+AGG | - | chr4_2:10020907-10020926 | Msa0587940:intron | 30.0% | |
| !!! | CTCCATACGTTCTAAAATTT+TGG | - | chr4_2:10021000-10021019 | Msa0587940:intron | 30.0% |
| !!! | CACCAAAATTTTAGAACGTA+TGG | + | chr4_2:10021005-10021024 | None:intergenic | 30.0% |
| !! | AAATGTTAACTTGTGTCCTT+GGG | - | chr4_2:10021211-10021230 | Msa0587940:intron | 30.0% |
| !! | ATACTACTACTTTAAAGTGG+AGG | - | chr4_2:10021434-10021453 | Msa0587940:intron | 30.0% |
| !! | TACTACTACTTTAAAGTGGA+GGG | - | chr4_2:10021435-10021454 | Msa0587940:intron | 30.0% |
| AACTACTTCTCTTCAATCAA+AGG | + | chr4_2:10021890-10021909 | None:intergenic | 30.0% | |
| ! | TGAAGAGAAGTAGTTTTTGT+TGG | - | chr4_2:10021895-10021914 | Msa0587940:exon | 30.0% |
| AGGGTTGGAATATTTGATGA+AGG | + | chr4_2:10017639-10017658 | None:intergenic | 35.0% | |
| ! | AAAATGGCAAGAGAAGGTTT+TGG | - | chr4_2:10017701-10017720 | Msa0587940:three_prime_UTR | 35.0% |
| ! | CTCTTCTTCTCATTCTTTTG+TGG | + | chr4_2:10017770-10017789 | None:intergenic | 35.0% |
| CACAAAAGAATGAGAAGAAG+AGG | - | chr4_2:10017768-10017787 | Msa0587940:three_prime_UTR | 35.0% | |
| ! | GAGAAGAAGAATCAAGTTGT+GGG | - | chr4_2:10017851-10017870 | Msa0587940:three_prime_UTR | 35.0% |
| CTTCATTCATGTTCTTCTTC+CGG | + | chr4_2:10017898-10017917 | None:intergenic | 35.0% | |
| AGGTTCCAAAATGTACATGA+AGG | - | chr4_2:10017916-10017935 | Msa0587940:three_prime_UTR | 35.0% | |
| ! | GCTAACCTTCATGTACATTT+TGG | + | chr4_2:10017924-10017943 | None:intergenic | 35.0% |
| AATGTACATGAAGGTTAGCA+TGG | - | chr4_2:10017925-10017944 | Msa0587940:three_prime_UTR | 35.0% | |
| AGATCAATCTTACGCAAGTA+AGG | + | chr4_2:10017959-10017978 | None:intergenic | 35.0% | |
| ! | TGATTTGCATAAGGGATACT+TGG | - | chr4_2:10017979-10017998 | Msa0587940:exon | 35.0% |
| ! | TAATGTGTCTCACATTGACT+GGG | + | chr4_2:10018702-10018721 | None:intergenic | 35.0% |
| ! | AAAGATTGCAATGACGGAAT+TGG | + | chr4_2:10018757-10018776 | None:intergenic | 35.0% |
| GCACCATATATAGGTTTAAC+TGG | - | chr4_2:10018943-10018962 | Msa0587940:intron | 35.0% | |
| CTGCCAGTTAAACCTATATA+TGG | + | chr4_2:10018949-10018968 | None:intergenic | 35.0% | |
| AAGAAATGGACCTGCTTAAA+AGG | + | chr4_2:10019288-10019307 | None:intergenic | 35.0% | |
| ACTCGACAAACATCAAAAAC+AGG | - | chr4_2:10019366-10019385 | Msa0587940:CDS | 35.0% | |
| !! | TTAGTTAAGGTATTGATCCC+AGG | - | chr4_2:10019408-10019427 | Msa0587940:CDS | 35.0% |
| GTTGCACTATAATATCTACC+TGG | + | chr4_2:10019429-10019448 | None:intergenic | 35.0% | |
| TCCTAGAAAAAGGGTAAAGT+GGG | - | chr4_2:10019485-10019504 | Msa0587940:intron | 35.0% | |
| TTCTCCTCATTATTTGATGG+TGG | - | chr4_2:10019541-10019560 | Msa0587940:intron | 35.0% | |
| ! | ATTTCTTTTTGCCCTTCTGT+GGG | + | chr4_2:10019754-10019773 | None:intergenic | 35.0% |
| ! | TATTTCTTTTTGCCCTTCTG+TGG | + | chr4_2:10019755-10019774 | None:intergenic | 35.0% |
| GGACAATGCATAATATATGC+AGG | - | chr4_2:10019897-10019916 | Msa0587940:intron | 35.0% | |
| ATGGAGAAATAAGATGTTCG+GGG | + | chr4_2:10019937-10019956 | None:intergenic | 35.0% | |
| CCATGCTAAAGACACATATT+AGG | + | chr4_2:10020092-10020111 | None:intergenic | 35.0% | |
| CCTAATATGTGTCTTTAGCA+TGG | - | chr4_2:10020089-10020108 | Msa0587940:intron | 35.0% | |
| CCATCTTTGTCCTCATAAAT+GGG | + | chr4_2:10020198-10020217 | None:intergenic | 35.0% | |
| ACCATCTTTGTCCTCATAAA+TGG | + | chr4_2:10020199-10020218 | None:intergenic | 35.0% | |
| CACGAAATCAAAGTTAGTAC+TGG | + | chr4_2:10020546-10020565 | None:intergenic | 35.0% | |
| !! | GAAATGTTAACTTGTGTCCT+TGG | - | chr4_2:10021210-10021229 | Msa0587940:intron | 35.0% |
| !! | AATGTTAACTTGTGTCCTTG+GGG | - | chr4_2:10021212-10021231 | Msa0587940:intron | 35.0% |
| TTAACTTATCTTATGCCCCA+AGG | + | chr4_2:10021230-10021249 | None:intergenic | 35.0% | |
| TTGAATCATGCAAAAGGCTA+AGG | - | chr4_2:10021534-10021553 | Msa0587940:intron | 35.0% | |
| TATGAAGAGATCAGATGCAA+AGG | - | chr4_2:10021559-10021578 | Msa0587940:CDS | 35.0% | |
| ATGAAGAGATCAGATGCAAA+GGG | - | chr4_2:10021560-10021579 | Msa0587940:CDS | 35.0% | |
| AGAGATTCATATAGAAGGCT+TGG | - | chr4_2:10021612-10021631 | Msa0587940:CDS | 35.0% | |
| GACTTGAAATAACCGAGCTA+AGG | - | chr4_2:10017723-10017742 | Msa0587940:three_prime_UTR | 40.0% | |
| TGAAATAACCGAGCTAAGGT+TGG | - | chr4_2:10017727-10017746 | Msa0587940:three_prime_UTR | 40.0% | |
| GAAATAACCGAGCTAAGGTT+GGG | - | chr4_2:10017728-10017747 | Msa0587940:three_prime_UTR | 40.0% | |
| ! | CGAGAAGAAGAATCAAGTTG+TGG | - | chr4_2:10017850-10017869 | Msa0587940:three_prime_UTR | 40.0% |
| ! | AGAAGAATCAAGTTGTGGGA+TGG | - | chr4_2:10017855-10017874 | Msa0587940:three_prime_UTR | 40.0% |
| CGGAAGAAGAACATGAATGA+AGG | - | chr4_2:10017896-10017915 | Msa0587940:three_prime_UTR | 40.0% | |
| TACATGAAGGTTAGCATGGA+TGG | - | chr4_2:10017929-10017948 | Msa0587940:three_prime_UTR | 40.0% | |
| CTCTTTGGTTGTTGTGGAAT+TGG | - | chr4_2:10018025-10018044 | Msa0587940:CDS | 40.0% | |
| TGCTTGTGCGTTCAAATTCA+TGG | - | chr4_2:10018444-10018463 | Msa0587940:intron | 40.0% | |
| GTAATGTGTCTCACATTGAC+TGG | + | chr4_2:10018703-10018722 | None:intergenic | 40.0% | |
| ! | TGCAATGACGGAATTGGATT+CGG | + | chr4_2:10018751-10018770 | None:intergenic | 40.0% |
| AGGTTTAACTGGCAGTATAG+TGG | - | chr4_2:10018954-10018973 | Msa0587940:intron | 40.0% | |
| ! | AGAATCCGAACCTTTTAAGC+AGG | - | chr4_2:10019275-10019294 | Msa0587940:intron | 40.0% |
| ATGGACCTGCTTAAAAGGTT+CGG | + | chr4_2:10019283-10019302 | None:intergenic | 40.0% | |
| GTCCTAGAAAAAGGGTAAAG+TGG | - | chr4_2:10019484-10019503 | Msa0587940:intron | 40.0% | |
| ! | TCCCACTTTACCCTTTTTCT+AGG | + | chr4_2:10019489-10019508 | None:intergenic | 40.0% |
| ! | TTTCTTTTTGCCCTTCTGTG+GGG | + | chr4_2:10019753-10019772 | None:intergenic | 40.0% |
| TGAGCTTAACTCAGTTGCTA+GGG | - | chr4_2:10019876-10019895 | Msa0587940:intron | 40.0% | |
| TGAACACGTTCCCATTTATG+AGG | - | chr4_2:10020185-10020204 | Msa0587940:intron | 40.0% | |
| CCCATTTATGAGGACAAAGA+TGG | - | chr4_2:10020195-10020214 | Msa0587940:intron | 40.0% | |
| GTTGAACCCATCAATTAGGA+AGG | - | chr4_2:10020780-10020799 | Msa0587940:intron | 40.0% | |
| !! | TAATGGCTTTGCCTTTTCCA+TGG | + | chr4_2:10020831-10020850 | None:intergenic | 40.0% |
| ! | AGATCAGATGCAAAGGGTTT+TGG | - | chr4_2:10021566-10021585 | Msa0587940:CDS | 40.0% |
| !!! | GGTTTTGGTTTGCAACCAAA+AGG | - | chr4_2:10021581-10021600 | Msa0587940:CDS | 40.0% |
| !! | ACATGTATTTTGAACGGAGG+AGG | + | chr4_2:10021990-10022009 | None:intergenic | 40.0% |
| ! | TTCTTTTGTGGCTCACCACA+TGG | + | chr4_2:10017758-10017777 | None:intergenic | 45.0% |
| AGGATGTTCTCCGAGATTGA+CGG | - | chr4_2:10017788-10017807 | Msa0587940:three_prime_UTR | 45.0% | |
| ! | CTTCTCGATTTTCTCGTCAC+CGG | + | chr4_2:10017837-10017856 | None:intergenic | 45.0% |
| ! | GGGATACTTGGAGTTAGCTT+TGG | - | chr4_2:10017991-10018010 | Msa0587940:CDS | 45.0% |
| !! | CTTGGAGTTAGCTTTGGCTT+TGG | - | chr4_2:10017997-10018016 | Msa0587940:CDS | 45.0% |
| !! | TTGGCTTTGGAGAAGCTCTT+TGG | - | chr4_2:10018010-10018029 | Msa0587940:CDS | 45.0% |
| GAGAAGCTCTTTGGTTGTTG+TGG | - | chr4_2:10018019-10018038 | Msa0587940:CDS | 45.0% | |
| CAATATCCACCCTCACACTT+AGG | - | chr4_2:10018722-10018741 | Msa0587940:intron | 45.0% | |
| ! | ATTCGGTGACCTAAGTGTGA+GGG | + | chr4_2:10018734-10018753 | None:intergenic | 45.0% |
| CACGCCACCATCAAATAATG+AGG | + | chr4_2:10019548-10019567 | None:intergenic | 45.0% | |
| GTGAGCTTAACTCAGTTGCT+AGG | - | chr4_2:10019875-10019894 | Msa0587940:intron | 45.0% | |
| ATGAGGACAAAGATGGTGAC+TGG | - | chr4_2:10020202-10020221 | Msa0587940:intron | 45.0% | |
| ! | TCACGCATGTCGGTTACTTA+GGG | + | chr4_2:10020742-10020761 | None:intergenic | 45.0% |
| ! | TTCACGCATGTCGGTTACTT+AGG | + | chr4_2:10020743-10020762 | None:intergenic | 45.0% |
| TCAAATGTCATGGCCTACCA+TGG | - | chr4_2:10020811-10020830 | Msa0587940:intron | 45.0% | |
| !! | GCGACATGTATTTTGAACGG+AGG | + | chr4_2:10021993-10022012 | None:intergenic | 45.0% |
| !!! | TTAAAAAAATAAGTAAATTT+TGG | - | chr4_2:10020953-10020972 | Msa0587940:intron | 5.0% |
| !! | AATTAACAATAAAAAAATTA+AGG | + | chr4_2:10021095-10021114 | None:intergenic | 5.0% |
| !! | CTTAAATATAATAAATTTAA+GGG | + | chr4_2:10021371-10021390 | None:intergenic | 5.0% |
| !! | TCTTAAATATAATAAATTTA+AGG | + | chr4_2:10021372-10021391 | None:intergenic | 5.0% |
| TGGCAAACCCAACCTTAGCT+CGG | + | chr4_2:10017738-10017757 | None:intergenic | 50.0% | |
| CTAAGGTTGGGTTTGCCATG+TGG | - | chr4_2:10017740-10017759 | Msa0587940:three_prime_UTR | 50.0% | |
| ATGTTCTCCGAGATTGACGG+TGG | - | chr4_2:10017791-10017810 | Msa0587940:three_prime_UTR | 50.0% | |
| GGGGAAGAAAATGGAGGTTC+CGG | - | chr4_2:10017815-10017834 | Msa0587940:three_prime_UTR | 50.0% | |
| TTCTTCCGGTACGAACACAC+CGG | + | chr4_2:10017884-10017903 | None:intergenic | 50.0% | |
| !! | GATTCGGTGACCTAAGTGTG+AGG | + | chr4_2:10018735-10018754 | None:intergenic | 50.0% |
| ATGGAACCAAACCCCACAGA+AGG | - | chr4_2:10019739-10019758 | Msa0587940:intron | 50.0% | |
| TGGAACCAAACCCCACAGAA+GGG | - | chr4_2:10019740-10019759 | Msa0587940:intron | 50.0% | |
| ! | TTTTGCCCTTCTGTGGGGTT+TGG | + | chr4_2:10019748-10019767 | None:intergenic | 50.0% |
| !! | GTTGACAGAGGAAGCGTTGA+AGG | - | chr4_2:10020149-10020168 | Msa0587940:intron | 50.0% |
| CAAAGATGGTGACTGGATGC+TGG | - | chr4_2:10020209-10020228 | Msa0587940:intron | 50.0% | |
| CCAGAAGGACTTACTCCCAA+GGG | + | chr4_2:10020245-10020264 | None:intergenic | 50.0% | |
| GAGCTAAGAAATGGGCCAGA+AGG | + | chr4_2:10020260-10020279 | None:intergenic | 50.0% | |
| GTCATGGCCTACCATGGAAA+AGG | - | chr4_2:10020817-10020836 | Msa0587940:intron | 50.0% | |
| ! | GGCTTTGCCTTTTCCATGGT+AGG | + | chr4_2:10020827-10020846 | None:intergenic | 50.0% |
| TTCTCCGAGATTGACGGTGG+TGG | - | chr4_2:10017794-10017813 | Msa0587940:three_prime_UTR | 55.0% | |
| TCTCCGAGATTGACGGTGGT+GGG | - | chr4_2:10017795-10017814 | Msa0587940:three_prime_UTR | 55.0% | |
| TTCCCCACCACCGTCAATCT+CGG | + | chr4_2:10017801-10017820 | None:intergenic | 55.0% | |
| !! | GACGGTGGTGGGGAAGAAAA+TGG | - | chr4_2:10017806-10017825 | Msa0587940:three_prime_UTR | 55.0% |
| !! | GGTGGTGGGGAAGAAAATGG+AGG | - | chr4_2:10017809-10017828 | Msa0587940:three_prime_UTR | 55.0% |
| ! | TCAAGTTGTGGGATGGCCTC+CGG | - | chr4_2:10017862-10017881 | Msa0587940:three_prime_UTR | 55.0% |
| GATGGTGACTGGATGCTGGT+TGG | - | chr4_2:10020213-10020232 | Msa0587940:intron | 55.0% | |
| ! | TGCTGGTTGGAGATGTCCCT+TGG | - | chr4_2:10020226-10020245 | Msa0587940:intron | 55.0% |
| GCTGGTTGGAGATGTCCCTT+GGG | - | chr4_2:10020227-10020246 | Msa0587940:intron | 55.0% | |
| CCCTTGGGAGTAAGTCCTTC+TGG | - | chr4_2:10020242-10020261 | Msa0587940:intron | 55.0% | |
| GCCAGAAGGACTTACTCCCA+AGG | + | chr4_2:10020246-10020265 | None:intergenic | 55.0% | |
| AAGAGGGGGTTCACGCATGT+CGG | + | chr4_2:10020752-10020771 | None:intergenic | 55.0% | |
| CTCCGAGATTGACGGTGGTG+GGG | - | chr4_2:10017796-10017815 | Msa0587940:three_prime_UTR | 60.0% | |
| TTCCGGTACGAACACACCGG+AGG | + | chr4_2:10017881-10017900 | None:intergenic | 60.0% | |
| CGGTGACCTAAGTGTGAGGG+TGG | + | chr4_2:10018731-10018750 | None:intergenic | 60.0% | |
| GGCCTCCGGTGTGTTCGTAC+CGG | - | chr4_2:10017876-10017895 | Msa0587940:three_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 10017591 | 10022014 | 10017591 | ID=Msa0587940;Name=Msa0587940 |
| chr4_2 | mRNA | 10017591 | 10022014 | 10017591 | ID=Msa0587940-mRNA-1;Parent=Msa0587940;Name=Msa0587940-mRNA-1;_AED=0.01;_eAED=0.01;_QI=113|0.5|0.66|1|0.5|0.33|3|389|176 |
| chr4_2 | exon | 10017591 | 10018079 | 10017591 | ID=Msa0587940-mRNA-1:exon:2783;Parent=Msa0587940-mRNA-1 |
| chr4_2 | exon | 10019355 | 10019442 | 10019355 | ID=Msa0587940-mRNA-1:exon:2782;Parent=Msa0587940-mRNA-1 |
| chr4_2 | exon | 10021559 | 10022014 | 10021559 | ID=Msa0587940-mRNA-1:exon:2781;Parent=Msa0587940-mRNA-1 |
| chr4_2 | five_prime_UTR | 10021902 | 10022014 | 10021902 | ID=Msa0587940-mRNA-1:five_prime_utr;Parent=Msa0587940-mRNA-1 |
| chr4_2 | CDS | 10021559 | 10021901 | 10021559 | ID=Msa0587940-mRNA-1:cds;Parent=Msa0587940-mRNA-1 |
| chr4_2 | CDS | 10019355 | 10019442 | 10019355 | ID=Msa0587940-mRNA-1:cds;Parent=Msa0587940-mRNA-1 |
| chr4_2 | CDS | 10017980 | 10018079 | 10017980 | ID=Msa0587940-mRNA-1:cds;Parent=Msa0587940-mRNA-1 |
| chr4_2 | three_prime_UTR | 10017591 | 10017979 | 10017591 | ID=Msa0587940-mRNA-1:three_prime_utr;Parent=Msa0587940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
