AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1445190


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1445190 MtrunA17_Chr3g0119371 96.762 525 7 2 1 515 1 525 0.0 1060
Msa1445190 MtrunA17_Chr5g0439311 80.435 506 87 4 21 515 12 516 0.0 856
Msa1445190 MtrunA17_Chr8g0388051 60.730 466 171 3 40 495 28 491 0.0 608
Msa1445190 MtrunA17_Chr4g0038131 59.402 468 177 5 39 495 27 492 0.0 573
Msa1445190 MtrunA17_Chr5g0444721 69.859 355 101 2 147 495 210 564 0.0 528
Msa1445190 MtrunA17_Chr5g0444721 74.016 127 33 0 22 148 16 142 1.41e-59 206
Msa1445190 MtrunA17_Chr1g0164201 49.587 484 222 8 23 493 5 479 1.53e-159 462
Msa1445190 MtrunA17_Chr5g0397201 48.626 473 224 6 36 500 36 497 3.34e-151 442
Msa1445190 MtrunA17_Chr1g0195271 48.354 486 227 8 15 493 26 494 1.65e-148 435
Msa1445190 MtrunA17_Chr8g0391391 48.712 466 224 8 40 495 30 490 3.08e-148 434
Msa1445190 MtrunA17_Chr3g0119821 48.276 464 227 7 40 495 35 493 2.46e-147 431
Msa1445190 MtrunA17_Chr3g0145261 47.854 466 230 7 40 496 24 485 9.52e-146 427
Msa1445190 MtrunA17_Chr3g0086311 45.918 490 241 6 23 499 5 483 8.55e-140 412
Msa1445190 MtrunA17_Chr4g0018301 44.186 473 249 6 31 497 36 499 8.28e-138 407
Msa1445190 MtrunA17_Chr3g0080171 46.336 464 233 6 40 495 25 480 1.10e-136 404
Msa1445190 MtrunA17_Chr4g0018361 44.919 492 241 11 25 495 7 489 8.67e-132 392
Msa1445190 MtrunA17_Chr3g0142501 42.463 471 247 11 41 496 58 519 6.15e-119 360
Msa1445190 MtrunA17_Chr5g0397181 45.545 404 201 6 101 496 1 393 3.37e-118 353
Msa1445190 MtrunA17_Chr8g0372031 42.161 472 247 11 41 496 64 525 1.41e-114 349
Msa1445190 MtrunA17_Chr3g0136381 46.322 367 182 4 31 392 21 377 8.46e-110 333
Msa1445190 MtrunA17_Chr2g0291461 41.096 511 248 16 40 513 111 605 5.35e-101 317
Msa1445190 MtrunA17_Chr3g0126111 35.556 540 271 16 19 500 68 588 2.96e-90 288
Msa1445190 MtrunA17_Chr3g0120661 38.066 486 255 14 40 492 116 588 4.89e-90 288
Msa1445190 MtrunA17_Chr4g0018341 40.070 287 154 6 215 495 2 276 5.10e-66 215
Msa1445190 MtrunA17_Chr4g0018351 53.261 184 79 2 38 216 28 209 2.35e-59 195
Msa1445190 MtrunA17_Chr1g0164181 51.351 185 84 2 82 261 3 186 2.28e-48 170
Msa1445190 MtrunA17_Chr1g0164181 47.205 161 84 1 333 493 170 329 1.68e-47 167
Msa1445190 MtrunA17_Chr7g0269571 44.578 166 80 2 339 493 43 207 2.12e-42 151
Msa1445190 MtrunA17_Chr4g0022271 43.571 140 74 1 339 478 20 154 1.53e-33 125
Msa1445190 MtrunA17_Chr4g0072811 40.541 148 83 4 346 492 19 162 7.57e-28 110
Msa1445190 MtrunA17_Chr3g0136371 46.739 92 48 1 392 483 1 91 5.53e-23 93.6
Msa1445190 MtrunA17_Chr5g0397171 59.524 42 17 0 39 80 40 81 1.12e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1445190 AT2G32990.1 73.225 493 112 3 22 494 11 503 0.0 758
Msa1445190 AT1G64390.1 61.159 466 169 3 40 495 25 488 0.0 600
Msa1445190 AT4G11050.3 59.957 467 175 3 40 496 26 490 0.0 589
Msa1445190 AT4G11050.1 59.957 467 175 3 40 496 26 490 0.0 588
Msa1445190 AT4G11050.2 59.957 467 175 3 40 496 26 490 0.0 586
Msa1445190 AT1G48930.1 57.082 466 188 4 39 494 29 492 0.0 525
Msa1445190 AT2G44550.1 50.522 479 218 6 25 493 18 487 1.34e-160 465
Msa1445190 AT2G44540.1 50.000 482 221 7 22 493 17 488 1.60e-156 455
Msa1445190 AT2G44560.1 50.417 480 219 7 24 493 18 488 8.76e-154 448
Msa1445190 AT2G44570.1 47.412 483 235 7 24 495 17 491 3.93e-152 444
Msa1445190 AT4G02290.1 49.892 463 220 7 40 495 52 509 1.69e-147 433
Msa1445190 AT1G02800.1 50.542 461 214 7 40 493 43 496 4.60e-147 431
Msa1445190 AT1G70710.1 46.764 479 243 7 24 495 12 485 1.71e-145 427
Msa1445190 AT4G23560.1 47.401 481 233 7 24 496 7 475 1.66e-144 424
Msa1445190 AT4G09740.1 47.401 481 233 7 24 496 7 475 1.96e-144 424
Msa1445190 AT4G39010.1 47.109 467 231 9 40 495 29 490 3.84e-143 421
Msa1445190 AT1G23210.1 46.868 463 234 7 40 495 28 485 1.88e-139 411
Msa1445190 AT3G43860.2 45.378 476 243 6 26 495 19 483 1.97e-137 406
Msa1445190 AT3G43860.1 45.378 476 243 6 26 495 19 483 1.97e-137 406
Msa1445190 AT1G22880.1 46.250 480 241 9 24 495 8 478 7.02e-137 405
Msa1445190 AT1G71380.1 45.455 484 242 11 24 495 5 478 1.53e-135 401
Msa1445190 AT4G39000.1 45.975 472 239 9 40 500 25 491 1.48e-132 394
Msa1445190 AT1G19940.2 46.753 462 226 9 40 490 48 500 8.32e-132 393
Msa1445190 AT1G19940.1 46.753 462 226 9 40 490 48 500 8.32e-132 393
Msa1445190 AT1G75680.1 46.608 457 224 9 41 486 58 505 3.41e-126 379
Msa1445190 AT4G38990.2 43.416 486 256 10 25 495 8 489 1.98e-123 370
Msa1445190 AT4G02290.2 47.264 402 200 7 101 495 1 397 2.62e-114 344
Msa1445190 AT1G22880.2 44.417 403 207 9 101 495 1 394 5.19e-109 330
Msa1445190 AT2G44570.2 44.557 395 200 7 24 407 17 403 3.68e-107 326
Msa1445190 AT4G39010.2 46.281 363 180 8 40 391 29 387 1.66e-105 321
Msa1445190 AT5G49720.1 41.633 490 235 16 40 492 108 583 1.68e-95 302
Msa1445190 AT1G19940.3 44.780 364 186 7 40 392 48 407 2.44e-93 291
Msa1445190 AT1G65610.1 35.887 496 273 15 40 503 116 598 1.95e-85 276
Msa1445190 AT4G24260.1 40.326 491 246 15 40 495 108 586 1.12e-84 274
Msa1445190 AT4G38990.1 42.655 354 171 7 25 371 8 336 1.33e-79 253
Msa1445190 AT1G22880.3 47.531 324 154 8 24 339 8 323 2.97e-79 251
Msa1445190 AT4G24260.3 38.660 388 196 13 40 392 108 488 4.26e-53 187
Msa1445190 AT4G24260.2 40.483 331 155 11 40 332 108 434 2.84e-51 181

Find 118 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCACAAGTTGATTACATTT+TGG 0.156175 tig0030956:+39987 Msa1445190:CDS
AGAACCAAATCCTAATATTT+TGG 0.167708 tig0030956:+40161 Msa1445190:CDS
CATACAACCAACGTGTTAAT+TGG 0.167826 tig0030956:+36517 Msa1445190:CDS
GAAAATACATTCTTTAAAAT+AGG 0.186741 tig0030956:-40441 None:intergenic
AAATATTAGGATTTGGTTCT+TGG 0.200576 tig0030956:-40158 None:intergenic
AAAGGTATTTGGTGCAAATT+TGG 0.202827 tig0030956:-40578 None:intergenic
ATGTAATGGAAGCAATTAAA+TGG 0.203237 tig0030956:+36823 Msa1445190:CDS
AACTCATGTTAAGTGGATTT+TGG 0.205279 tig0030956:-40011 None:intergenic
ACCTCTATGATGCACCCTTT+TGG 0.242199 tig0030956:-40061 None:intergenic
ATGAGTTACTTAGTGGGATA+TGG 0.273448 tig0030956:+40027 Msa1445190:CDS
GCAGGTGATCATGTGAAATT+TGG 0.274678 tig0030956:+36714 Msa1445190:CDS
TACTTTGAAGCACAACGTTC+TGG 0.276345 tig0030956:+36486 Msa1445190:CDS
ATTGTGCAGTTATTTGAGTT+TGG 0.280930 tig0030956:+38107 Msa1445190:intron
AAAATACATTCTTTAAAATA+GGG 0.283671 tig0030956:-40440 None:intergenic
TTGTGCAGTTATTTGAGTTT+GGG 0.294397 tig0030956:+38108 Msa1445190:intron
CCAACCAAAATATTAGGATT+TGG 0.302553 tig0030956:-40165 None:intergenic
ATATATAGAGAGTATTTAAA+AGG 0.306750 tig0030956:-40361 None:intergenic
GTTAATTGGCGTCATCATTC+TGG 0.309546 tig0030956:+36531 Msa1445190:CDS
AAAGCTCCAACCAAAATATT+AGG 0.310755 tig0030956:-40171 None:intergenic
CAGCTGCTTCCATTGTGTTT+AGG 0.320538 tig0030956:+37359 Msa1445190:CDS
TCAAAATTGTCTAGATTATC+AGG 0.328331 tig0030956:-40204 None:intergenic
AGAGAGAATAAAGGGTTCAT+AGG 0.328810 tig0030956:+40102 Msa1445190:CDS
ATTTCTAATGCTCATACATT+TGG 0.331259 tig0030956:+38275 Msa1445190:CDS
GCACACAAGGGTATGATAAT+TGG 0.347724 tig0030956:+40127 Msa1445190:CDS
CAATTAACACGTTGGTTGTA+TGG 0.354636 tig0030956:-36516 None:intergenic
CATGGAGTGCTATTGAGTTT+AGG 0.363527 tig0030956:+36769 Msa1445190:CDS
GTGACAATGATGTTTAAATC+TGG 0.367337 tig0030956:-36382 None:intergenic
GCTCATACATTTGGTGGTAT+TGG 0.372035 tig0030956:+38284 Msa1445190:CDS
TAAATTTGTTAATATTATAG+TGG 0.388889 tig0030956:+40482 Msa1445190:three_prime_UTR
TTTCAGGTGGATTTGGTTGG+AGG 0.401221 tig0030956:+36681 Msa1445190:intron
TGTAATGGAAGCAATTAAAT+GGG 0.406228 tig0030956:+36824 Msa1445190:CDS
CAAAAGATCAATTGCCAAGA+TGG 0.412945 tig0030956:+39928 Msa1445190:CDS
GTATCATATAGAGAGAATAA+AGG 0.414088 tig0030956:+40093 Msa1445190:CDS
CTGGACGTTGCCAACAATAA+TGG 0.415828 tig0030956:-37249 None:intergenic
CTTGAGGTTGTCATGTCCTC+TGG 0.417866 tig0030956:-37268 None:intergenic
GTCAAAATATTCTTGTTTGT+CGG 0.429086 tig0030956:-38246 None:intergenic
AAGATAGATGAGAAGAATCC+AGG 0.433832 tig0030956:+37301 Msa1445190:CDS
TTCAGGTGGATTTGGTTGGA+GGG 0.437613 tig0030956:+36682 Msa1445190:intron
TCATGCAAAGAGGGAATAGA+AGG 0.439518 tig0030956:+40304 Msa1445190:CDS
ATCCCAGCTGAATTCTGTTA+TGG 0.440268 tig0030956:-38312 None:intergenic
ACTTTGAAGCACAACGTTCT+GGG 0.441438 tig0030956:+36487 Msa1445190:CDS
GGGAAATATGATGGAAGTGT+TGG 0.451425 tig0030956:+38143 Msa1445190:CDS
TATCATATAGAGAGAATAAA+GGG 0.456692 tig0030956:+40094 Msa1445190:CDS
TCTAATGCTCATACATTTGG+TGG 0.457457 tig0030956:+38278 Msa1445190:CDS
AGCTGGGATGTTAAGTATGC+TGG 0.465855 tig0030956:+38326 Msa1445190:CDS
ATGGGCCTAAGTACCCCAAA+AGG 0.469761 tig0030956:+40046 Msa1445190:CDS
ATACATTTGGTGGTATTGGT+TGG 0.472675 tig0030956:+38288 Msa1445190:CDS
AGGCAAGAAATTGTTGAAGC+TGG 0.479140 tig0030956:+36789 Msa1445190:CDS
ACTAAGTAACTCATGTTAAG+TGG 0.486492 tig0030956:-40018 None:intergenic
GGTCCATAACAGAATTCAGC+TGG 0.486609 tig0030956:+38309 Msa1445190:CDS
CAAAATTGAGAATTTCATCA+TGG 0.490347 tig0030956:-39960 None:intergenic
ACTTAACATGAGTTACTTAG+TGG 0.491572 tig0030956:+40020 Msa1445190:CDS
TGAGTTACTTAGTGGGATAT+GGG 0.492298 tig0030956:+40028 Msa1445190:CDS
TTGGTTGGAGCTTTGGTAGG+AGG 0.493848 tig0030956:+40180 Msa1445190:CDS
TGGAGAAACTTCTGCAGCTA+TGG 0.496229 tig0030956:+37336 Msa1445190:CDS
CATCATTCTGGTCTTACAGA+TGG 0.500607 tig0030956:+36543 Msa1445190:CDS
GAAGAATCCAGGTTCAGATC+TGG 0.506230 tig0030956:+37312 Msa1445190:CDS
ATTGTTGAAGCTGGTGAACT+TGG 0.513050 tig0030956:+36798 Msa1445190:CDS
CTTACAGATGGTTTAGAACA+AGG 0.516101 tig0030956:+36555 Msa1445190:CDS
ATAATCAAAAGATTGTGTTA+TGG 0.516983 tig0030956:-36436 None:intergenic
CATGGCCCACAATCCCATCT+TGG 0.517673 tig0030956:-39942 None:intergenic
AGCTACTATGCGTCGGTGAG+TGG 0.518978 tig0030956:+38176 Msa1445190:CDS
GAGAGAATAAAGGGTTCATA+GGG 0.518983 tig0030956:+40103 Msa1445190:CDS
TTGCAAAATTCATGCAAAGA+GGG 0.519154 tig0030956:+40295 Msa1445190:CDS
AAAAGATCAATTGCCAAGAT+GGG 0.520703 tig0030956:+39929 Msa1445190:CDS
AATTGCCAAGATGGGATTGT+GGG 0.521792 tig0030956:+39937 Msa1445190:CDS
ATATAATACTGCACCATTAG+TGG 0.523912 tig0030956:+40266 Msa1445190:CDS
AAATACAGAGGGAAATATGA+TGG 0.525154 tig0030956:+38134 Msa1445190:CDS
GAGACACAGACCATTATTGT+TGG 0.526224 tig0030956:+37239 Msa1445190:CDS
CAAGGGTATGATAATTGGTA+TGG 0.527762 tig0030956:+40132 Msa1445190:CDS
TGTGCAGTTATTTGAGTTTG+GGG 0.529149 tig0030956:+38109 Msa1445190:intron
TGTGAAATTTGGTTTACCAA+TGG 0.529922 tig0030956:+36725 Msa1445190:CDS
AAATACATTCTTTAAAATAG+GGG 0.535983 tig0030956:-40439 None:intergenic
AAAATATTCTTGTTTGTCGG+TGG 0.547238 tig0030956:-38243 None:intergenic
AAAATTCAAGAAAGAAAGTG+AGG 0.550203 tig0030956:-36260 None:intergenic
TTTGCAAAATTCATGCAAAG+AGG 0.550554 tig0030956:+40294 Msa1445190:CDS
GATACATGGATGAGTTATTG+TGG 0.552659 tig0030956:+38198 Msa1445190:CDS
TATAATACTGCACCATTAGT+GGG 0.560164 tig0030956:+40267 Msa1445190:CDS
GTTGGAGGGTACTATGATGC+AGG 0.563279 tig0030956:+36696 Msa1445190:CDS
TGACAATGATGTTTAAATCT+GGG 0.565379 tig0030956:-36381 None:intergenic
AATACATTCTTTAAAATAGG+GGG 0.565425 tig0030956:-40438 None:intergenic
TGCGTCGGTGAGTGGATACA+TGG 0.568122 tig0030956:+38184 Msa1445190:CDS
AATGTAATCAACTTGTGACT+TGG 0.573884 tig0030956:-39983 None:intergenic
GGGTTCATAGGGTGCACACA+AGG 0.574402 tig0030956:+40114 Msa1445190:CDS
TCTCCAGCCAGATCTGAACC+TGG 0.578429 tig0030956:-37319 None:intergenic
ATACATGGATGAGTTATTGT+GGG 0.579757 tig0030956:+38199 Msa1445190:CDS
TTACTGTCACAATGTTGTCA+TGG 0.583673 tig0030956:+36751 Msa1445190:CDS
TACAGATGGTTTAGAACAAG+GGG 0.583836 tig0030956:+36557 Msa1445190:CDS
GCAAAGAGGGAATAGAAGGT+TGG 0.590189 tig0030956:+40308 Msa1445190:CDS
TATCTTAAAAGCTTGTCTTG+AGG 0.590517 tig0030956:-37284 None:intergenic
AGTTATTGTGGGGAGCTATG+TGG 0.591433 tig0030956:+38210 Msa1445190:CDS
AATCCAGGTTCAGATCTGGC+TGG 0.593866 tig0030956:+37316 Msa1445190:CDS
CTTAACATGAGTTACTTAGT+GGG 0.597597 tig0030956:+40021 Msa1445190:CDS
ATTCTCTCTATATGATACAA+TGG 0.597953 tig0030956:-40088 None:intergenic
CAATTGCCAAGATGGGATTG+TGG 0.600603 tig0030956:+39936 Msa1445190:CDS
ATTGTGACAGTAAATGCCAT+TGG 0.602158 tig0030956:-36741 None:intergenic
TGGTGAACTTGGTCATGTAA+TGG 0.602665 tig0030956:+36809 Msa1445190:CDS
TGGGCCTAAGTACCCCAAAA+GGG 0.608177 tig0030956:+40047 Msa1445190:CDS
CTTACATAGAGTAATCCAGC+TGG 0.611840 tig0030956:-39826 None:intergenic
TTACAGATGGTTTAGAACAA+GGG 0.612255 tig0030956:+36556 Msa1445190:CDS
AATGTGGAAAGAACACCAGC+TGG 0.616199 tig0030956:+39811 Msa1445190:CDS
CCCAAAAGGGTGCATCATAG+AGG 0.625621 tig0030956:+40060 Msa1445190:CDS
AGTTTGGGGACAAATACAGA+GGG 0.630720 tig0030956:+38123 Msa1445190:CDS
TTACTACTACCTGCTGAGCA+TGG 0.641231 tig0030956:-37417 None:intergenic
GTCCATAACAGAATTCAGCT+GGG 0.643895 tig0030956:+38310 Msa1445190:CDS
GATGACGCCAATTAACACGT+TGG 0.651812 tig0030956:-36524 None:intergenic
TTATTGTTGGCAACGTCCAG+AGG 0.652974 tig0030956:+37252 Msa1445190:CDS
AGTGAAGAGCTACTATGCGT+CGG 0.655502 tig0030956:+38169 Msa1445190:CDS
AAAAGTAGCTGAGAATAATG+TGG 0.661774 tig0030956:-37391 None:intergenic
GAGTTTGGGGACAAATACAG+AGG 0.667296 tig0030956:+38122 Msa1445190:CDS
GAACAATTATGTGCAAACTG+AGG 0.668349 tig0030956:+40236 Msa1445190:CDS
GTAATGGAAGCAATTAAATG+GGG 0.669304 tig0030956:+36825 Msa1445190:CDS
AAACAATGGCAGCAGCAATG+TGG 0.670730 tig0030956:+39795 Msa1445190:CDS
GGTTCATAGGGTGCACACAA+GGG 0.675227 tig0030956:+40115 Msa1445190:CDS
AAATTCAAGAAAGAAAGTGA+GGG 0.678743 tig0030956:-36259 None:intergenic
TTGAAGCACAACGTTCTGGG+AGG 0.691689 tig0030956:+36490 Msa1445190:CDS
GATTACTCTATGTAAGACAG+TGG 0.704386 tig0030956:+39833 Msa1445190:CDS
TACATGGATGAGTTATTGTG+GGG 0.766782 tig0030956:+38200 Msa1445190:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGAATAATTTATTATGTT+TGG + tig0030956:37504-37523 Msa1445190:intron 10.0%
!!! TACTAATATTTTTACTTAAT+TGG - tig0030956:38006-38025 None:intergenic 10.0%
!!! AAAATACATTCTTTAAAATA+GGG - tig0030956:40443-40462 None:intergenic 10.0%
!!! TAAATTTGTTAATATTATAG+TGG + tig0030956:40482-40501 Msa1445190:three_prime_UTR 10.0%
!!! AAAGTTGAGATTTTTATTTT+TGG + tig0030956:36648-36667 Msa1445190:intron 15.0%
!!! AAGTTGAGATTTTTATTTTT+GGG + tig0030956:36649-36668 Msa1445190:intron 15.0%
!! TATTAAAGTATGTAAAACAA+GGG + tig0030956:37582-37601 Msa1445190:intron 15.0%
!!! TTTTGATTGTGTTTTTTTTT+TGG + tig0030956:37687-37706 Msa1445190:intron 15.0%
!! TAAAATACAAACAAAACAAA+AGG + tig0030956:38372-38391 Msa1445190:intron 15.0%
!! AAAATACAAACAAAACAAAA+GGG + tig0030956:38373-38392 Msa1445190:intron 15.0%
!!! TATCATTTTATTTGATTTGA+TGG + tig0030956:38677-38696 Msa1445190:intron 15.0%
!!! ATATATAGAGAGTATTTAAA+AGG - tig0030956:40364-40383 None:intergenic 15.0%
!!! AAATACATTCTTTAAAATAG+GGG - tig0030956:40442-40461 None:intergenic 15.0%
!!! GAAAATACATTCTTTAAAAT+AGG - tig0030956:40444-40463 None:intergenic 15.0%
!!! AAAAAAACTTGGTACTTTTT+AGG - tig0030956:36295-36314 None:intergenic 20.0%
!!! AAAAGTACCAAGTTTTTTTT+AGG + tig0030956:36296-36315 Msa1445190:five_prime_UTR 20.0%
!! ATAATCAAAAGATTGTGTTA+TGG - tig0030956:36439-36458 None:intergenic 20.0%
!!! TTTCATTTTCTTGATTTTGA+TGG + tig0030956:36601-36620 Msa1445190:intron 20.0%
!!! GAAACAAAATTCTGAAATTA+AGG + tig0030956:37194-37213 Msa1445190:intron 20.0%
!!! GAAATTAAGGTTTTTTACTT+AGG + tig0030956:37207-37226 Msa1445190:intron 20.0%
!! GTATTAAAGTATGTAAAACA+AGG + tig0030956:37581-37600 Msa1445190:intron 20.0%
!!! AAGATTGTAAATAGCTATTT+TGG + tig0030956:37606-37625 Msa1445190:intron 20.0%
!!! ACTACAGTAAATAGTTATTT+TGG - tig0030956:37863-37882 None:intergenic 20.0%
!!! TACTACACTATCAATTTTAA+AGG + tig0030956:37936-37955 Msa1445190:intron 20.0%
!!! TTCAAACATGTCAATTTTAT+AGG + tig0030956:38450-38469 Msa1445190:intron 20.0%
!!! TTCTAGTATTTTATTTGTGT+TGG + tig0030956:38521-38540 Msa1445190:intron 20.0%
!! TGAAGTCAAAAATAAAATGA+TGG + tig0030956:38603-38622 Msa1445190:intron 20.0%
!! GAAGTCAAAAATAAAATGAT+GGG + tig0030956:38604-38623 Msa1445190:intron 20.0%
!!! ACTTTTGAAACTAAAGTAAA+AGG - tig0030956:38653-38672 None:intergenic 20.0%
!! GACTATATAGCTAATATAAA+TGG + tig0030956:38873-38892 Msa1445190:intron 20.0%
!! TTTAGAAGAAGAAAATTTCA+GGG + tig0030956:39309-39328 Msa1445190:intron 20.0%
!! AAAAATAACAAATGGATCAA+GGG - tig0030956:39417-39436 None:intergenic 20.0%
!! AAAAAATAACAAATGGATCA+AGG - tig0030956:39418-39437 None:intergenic 20.0%
!!! TTGATCCATTTGTTATTTTT+TGG + tig0030956:39417-39436 Msa1445190:intron 20.0%
!! ACTATCCAAAAAATAACAAA+TGG - tig0030956:39425-39444 None:intergenic 20.0%
!!! ATTTGTTATTTTTTGGATAG+TGG + tig0030956:39424-39443 Msa1445190:intron 20.0%
!!! TTTGTTATTTTTTGGATAGT+GGG + tig0030956:39425-39444 Msa1445190:intron 20.0%
!! AAAAGAACAACAAATATTTC+TGG + tig0030956:39532-39551 Msa1445190:intron 20.0%
!!! TACTAGTAAACTTTTACATA+AGG - tig0030956:39632-39651 None:intergenic 20.0%
!! TATCATATAGAGAGAATAAA+GGG + tig0030956:40094-40113 Msa1445190:CDS 20.0%
!!! AATACATTCTTTAAAATAGG+GGG - tig0030956:40441-40460 None:intergenic 20.0%
! AAATTCAAGAAAGAAAGTGA+GGG - tig0030956:36262-36281 None:intergenic 25.0%
! AAAATTCAAGAAAGAAAGTG+AGG - tig0030956:36263-36282 None:intergenic 25.0%
! TGACAATGATGTTTAAATCT+GGG - tig0030956:36384-36403 None:intergenic 25.0%
!! ATGTAATGGAAGCAATTAAA+TGG + tig0030956:36823-36842 Msa1445190:CDS 25.0%
!! TGTAATGGAAGCAATTAAAT+GGG + tig0030956:36824-36843 Msa1445190:CDS 25.0%
!!! ATTAAGGTTTTTTACTTAGG+TGG + tig0030956:37210-37229 Msa1445190:intron 25.0%
!!! TTAAGGTTTTTTACTTAGGT+GGG + tig0030956:37211-37230 Msa1445190:intron 25.0%
!!! ATTTGTTTTCCTAAACACAA+TGG - tig0030956:37371-37390 None:intergenic 25.0%
! TACTTGTCTCTTAAAGTTAA+AGG - tig0030956:37564-37583 None:intergenic 25.0%
! TGACTAACAAAACATATAAC+AGG - tig0030956:37741-37760 None:intergenic 25.0%
!!! TTGGAATTTTGACATATTCA+TGG + tig0030956:37805-37824 Msa1445190:intron 25.0%
!!! TCAATTTTAAAGGCAAATAG+TGG + tig0030956:37946-37965 Msa1445190:intron 25.0%
!!! CAATTTTAAAGGCAAATAGT+GGG + tig0030956:37947-37966 Msa1445190:intron 25.0%
!!! AATTTTAAAGGCAAATAGTG+GGG + tig0030956:37948-37967 Msa1445190:intron 25.0%
!! GTCAAAATATTCTTGTTTGT+CGG - tig0030956:38249-38268 None:intergenic 25.0%
! ATTTCTAATGCTCATACATT+TGG + tig0030956:38275-38294 Msa1445190:CDS 25.0%
! AGACAAAAAAGAGTGATTAA+AGG - tig0030956:38402-38421 None:intergenic 25.0%
! ATCTAAGGGATATTGTTAAT+AGG + tig0030956:38706-38725 Msa1445190:intron 25.0%
!! TATATAGTCTATTCTTTTGG+AGG - tig0030956:38862-38881 None:intergenic 25.0%
!! AGCTATATAGTCTATTCTTT+TGG - tig0030956:38865-38884 None:intergenic 25.0%
! AGAATAGTCATTGGTAAATA+AGG - tig0030956:39278-39297 None:intergenic 25.0%
! TGCATATATAGAATAGTCAT+TGG - tig0030956:39287-39306 None:intergenic 25.0%
! GTTTAGAAGAAGAAAATTTC+AGG + tig0030956:39308-39327 Msa1445190:intron 25.0%
! TTTCTTAAAGCCCAAAATAA+AGG - tig0030956:39451-39470 None:intergenic 25.0%
!!! TGTTGTTCTTTTAGAAATGT+GGG - tig0030956:39524-39543 None:intergenic 25.0%
!!! TTGTTGTTCTTTTAGAAATG+TGG - tig0030956:39525-39544 None:intergenic 25.0%
!! ATGTACATTTGAAGTGATAT+TGG + tig0030956:39589-39608 Msa1445190:intron 25.0%
!! TGTACATTTGAAGTGATATT+GGG + tig0030956:39590-39609 Msa1445190:intron 25.0%
!! GTAACTTTTGTAGTTTTTGA+TGG + tig0030956:39690-39709 Msa1445190:intron 25.0%
! CAAAATTGAGAATTTCATCA+TGG - tig0030956:39963-39982 None:intergenic 25.0%
!!! TCACAAGTTGATTACATTTT+GGG + tig0030956:39988-40007 Msa1445190:CDS 25.0%
! ATTCTCTCTATATGATACAA+TGG - tig0030956:40091-40110 None:intergenic 25.0%
! GTATCATATAGAGAGAATAA+AGG + tig0030956:40093-40112 Msa1445190:CDS 25.0%
!!! AAATATTAGGATTTGGTTCT+TGG - tig0030956:40161-40180 None:intergenic 25.0%
!! AGAACCAAATCCTAATATTT+TGG + tig0030956:40161-40180 Msa1445190:CDS 25.0%
! TCAAAATTGTCTAGATTATC+AGG - tig0030956:40207-40226 None:intergenic 25.0%
!! TGATAATCTAGACAATTTTG+AGG + tig0030956:40206-40225 Msa1445190:CDS 25.0%
!!! AGTACCAAGTTTTTTTTAGG+AGG + tig0030956:36299-36318 Msa1445190:five_prime_UTR 30.0%
!!! GTACCAAGTTTTTTTTAGGA+GGG + tig0030956:36300-36319 Msa1445190:five_prime_UTR 30.0%
GTGACAATGATGTTTAAATC+TGG - tig0030956:36385-36404 None:intergenic 30.0%
! TTACAGATGGTTTAGAACAA+GGG + tig0030956:36556-36575 Msa1445190:CDS 30.0%
!!! TTTTGGGTTTGTGTTTTTTC+AGG + tig0030956:36665-36684 Msa1445190:intron 30.0%
! TGTGAAATTTGGTTTACCAA+TGG + tig0030956:36725-36744 Msa1445190:CDS 30.0%
! GTAATGGAAGCAATTAAATG+GGG + tig0030956:36825-36844 Msa1445190:CDS 30.0%
TCTCAAATTATTAGCAGTGT+GGG - tig0030956:36968-36987 None:intergenic 30.0%
TTCTCAAATTATTAGCAGTG+TGG - tig0030956:36969-36988 None:intergenic 30.0%
! TTTCCAATTTTTGAACTTCC+TGG + tig0030956:37146-37165 Msa1445190:intron 30.0%
TATCTTAAAAGCTTGTCTTG+AGG - tig0030956:37287-37306 None:intergenic 30.0%
AAAAGTAGCTGAGAATAATG+TGG - tig0030956:37394-37413 None:intergenic 30.0%
GTGAATATAGCACAATTTAG+AGG - tig0030956:37443-37462 None:intergenic 30.0%
TTGTGCTATATTCACTATAG+TGG + tig0030956:37448-37467 Msa1445190:intron 30.0%
! AAGGTGCTTAAAAATGAAGT+GGG - tig0030956:37545-37564 None:intergenic 30.0%
!! AAAGGTGCTTAAAAATGAAG+TGG - tig0030956:37546-37565 None:intergenic 30.0%
CTCTTTGATTAGTAATCTCA+TGG - tig0030956:37771-37790 None:intergenic 30.0%
ATTATGCATTCACACTTATC+AGG - tig0030956:37900-37919 None:intergenic 30.0%
! ATTGTGCAGTTATTTGAGTT+TGG + tig0030956:38107-38126 Msa1445190:intron 30.0%
! TTGTGCAGTTATTTGAGTTT+GGG + tig0030956:38108-38127 Msa1445190:intron 30.0%
AAATACAGAGGGAAATATGA+TGG + tig0030956:38134-38153 Msa1445190:CDS 30.0%
ATACATGGATGAGTTATTGT+GGG + tig0030956:38199-38218 Msa1445190:CDS 30.0%
! AAAATATTCTTGTTTGTCGG+TGG - tig0030956:38246-38265 None:intergenic 30.0%
TTACCTTTGATGCTAAAACT+TGG - tig0030956:38355-38374 None:intergenic 30.0%
!!! TGTTGGTTTTCCTTTTTCAA+TGG + tig0030956:38538-38557 Msa1445190:intron 30.0%
GAGAAATAAGCCATTGAAAA+AGG - tig0030956:38551-38570 None:intergenic 30.0%
! ATGTTAGTAAAGCATTATGC+AGG - tig0030956:38584-38603 None:intergenic 30.0%
! GATGGGTTTAAGACTTAATT+TGG + tig0030956:38621-38640 Msa1445190:intron 30.0%
ATTTGATGGAGCAATATCTA+AGG + tig0030956:38691-38710 Msa1445190:intron 30.0%
TTTGATGGAGCAATATCTAA+GGG + tig0030956:38692-38711 Msa1445190:intron 30.0%
CTATCACAGTTCAATTAAAG+TGG + tig0030956:38785-38804 Msa1445190:intron 30.0%
ACCATTGAAACTTCAACATT+TGG - tig0030956:38829-38848 None:intergenic 30.0%
! ACCCTTTTTATGTTTTCTTC+AGG + tig0030956:39178-39197 Msa1445190:intron 30.0%
CCCTGAAGAAAACATAAAAA+GGG - tig0030956:39182-39201 None:intergenic 30.0%
! CCCTTTTTATGTTTTCTTCA+GGG + tig0030956:39179-39198 Msa1445190:intron 30.0%
ACCCTGAAGAAAACATAAAA+AGG - tig0030956:39183-39202 None:intergenic 30.0%
TAATGCACAATGATTGATAG+TGG + tig0030956:39352-39371 Msa1445190:intron 30.0%
!! TATTTCTGGAAATGTACTTC+TGG + tig0030956:39546-39565 Msa1445190:intron 30.0%
TCATGTCTCAACAAAAACAA+TGG + tig0030956:39781-39800 Msa1445190:CDS 30.0%
!! TGATCTTTTGATTCTCACTT+TGG - tig0030956:39918-39937 None:intergenic 30.0%
AAAAGATCAATTGCCAAGAT+GGG + tig0030956:39929-39948 Msa1445190:CDS 30.0%
AATGTAATCAACTTGTGACT+TGG - tig0030956:39986-40005 None:intergenic 30.0%
!!! GTCACAAGTTGATTACATTT+TGG + tig0030956:39987-40006 Msa1445190:CDS 30.0%
!! AACTCATGTTAAGTGGATTT+TGG - tig0030956:40014-40033 None:intergenic 30.0%
ACTAAGTAACTCATGTTAAG+TGG - tig0030956:40021-40040 None:intergenic 30.0%
ACTTAACATGAGTTACTTAG+TGG + tig0030956:40020-40039 Msa1445190:CDS 30.0%
CTTAACATGAGTTACTTAGT+GGG + tig0030956:40021-40040 Msa1445190:CDS 30.0%
CCAACCAAAATATTAGGATT+TGG - tig0030956:40168-40187 None:intergenic 30.0%
!!! CCAAATCCTAATATTTTGGT+TGG + tig0030956:40165-40184 Msa1445190:CDS 30.0%
AAAGCTCCAACCAAAATATT+AGG - tig0030956:40174-40193 None:intergenic 30.0%
!!! TAATATTTTGGTTGGAGCTT+TGG + tig0030956:40173-40192 Msa1445190:CDS 30.0%
!! TAGACAATTTTGAGGATCAA+AGG + tig0030956:40214-40233 Msa1445190:CDS 30.0%
ATATAATACTGCACCATTAG+TGG + tig0030956:40266-40285 Msa1445190:CDS 30.0%
TATAATACTGCACCATTAGT+GGG + tig0030956:40267-40286 Msa1445190:CDS 30.0%
TTTGCAAAATTCATGCAAAG+AGG + tig0030956:40294-40313 Msa1445190:CDS 30.0%
TTGCAAAATTCATGCAAAGA+GGG + tig0030956:40295-40314 Msa1445190:CDS 30.0%
CTTCCCTCCTAAAAAAAACT+TGG - tig0030956:36306-36325 None:intergenic 35.0%
! CAATTAACACGTTGGTTGTA+TGG - tig0030956:36519-36538 None:intergenic 35.0%
CATACAACCAACGTGTTAAT+TGG + tig0030956:36517-36536 Msa1445190:CDS 35.0%
! CTTACAGATGGTTTAGAACA+AGG + tig0030956:36555-36574 Msa1445190:CDS 35.0%
! TACAGATGGTTTAGAACAAG+GGG + tig0030956:36557-36576 Msa1445190:CDS 35.0%
!!! TGTGTTTTTTCAGGTGGATT+TGG + tig0030956:36674-36693 Msa1445190:intron 35.0%
!!! TTTTTTCAGGTGGATTTGGT+TGG + tig0030956:36678-36697 Msa1445190:intron 35.0%
ATTGTGACAGTAAATGCCAT+TGG - tig0030956:36744-36763 None:intergenic 35.0%
TTACTGTCACAATGTTGTCA+TGG + tig0030956:36751-36770 Msa1445190:CDS 35.0%
!! ATAGCTTGTGAGACATTTTG+AGG + tig0030956:37071-37090 Msa1445190:intron 35.0%
CAACCAGGAAGTTCAAAAAT+TGG - tig0030956:37152-37171 None:intergenic 35.0%
CATTAATCATCACATCAACC+AGG - tig0030956:37167-37186 None:intergenic 35.0%
! CTGGTTGATGTGATGATTAA+TGG + tig0030956:37165-37184 Msa1445190:intron 35.0%
!!! TTTTTTACTTAGGTGGGTGA+TGG + tig0030956:37217-37236 Msa1445190:intron 35.0%
AAGATAGATGAGAAGAATCC+AGG + tig0030956:37301-37320 Msa1445190:CDS 35.0%
! AAGAGACTCGTGAATGTTTT+TGG + tig0030956:37786-37805 Msa1445190:intron 35.0%
CACTTATCAGGAACATTACT+TGG - tig0030956:37888-37907 None:intergenic 35.0%
! TGTGCAGTTATTTGAGTTTG+GGG + tig0030956:38109-38128 Msa1445190:intron 35.0%
GATACATGGATGAGTTATTG+TGG + tig0030956:38198-38217 Msa1445190:CDS 35.0%
TACATGGATGAGTTATTGTG+GGG + tig0030956:38200-38219 Msa1445190:CDS 35.0%
TCTAATGCTCATACATTTGG+TGG + tig0030956:38278-38297 Msa1445190:CDS 35.0%
!! ATACATTTGGTGGTATTGGT+TGG + tig0030956:38288-38307 Msa1445190:CDS 35.0%
!! TCTCCAAGTTTTAGCATCAA+AGG + tig0030956:38349-38368 Msa1445190:intron 35.0%
TTTGAATTAAGCCAACCTAG+AGG - tig0030956:38436-38455 None:intergenic 35.0%
AGTAAAAGCAAAAAGCAGCA+TGG - tig0030956:38477-38496 None:intergenic 35.0%
!!! TGCTGCTTTTTGCTTTTACT+TGG + tig0030956:38477-38496 Msa1445190:intron 35.0%
ACAGTTCAATTAAAGTGGTC+TGG + tig0030956:38790-38809 Msa1445190:intron 35.0%
ATTAAAGTGGTCTGGCTATA+TGG + tig0030956:38798-38817 Msa1445190:intron 35.0%
GCCAAATGTTGAAGTTTCAA+TGG + tig0030956:38825-38844 Msa1445190:intron 35.0%
!! ACATGCATTGACTGTCAAAA+TGG + tig0030956:39039-39058 Msa1445190:intron 35.0%
TCAATCAGATAAGCAATCAG+TGG - tig0030956:39077-39096 None:intergenic 35.0%
AGGGTTTGCAATAAATCAGT+TGG + tig0030956:39198-39217 Msa1445190:intron 35.0%
! AAAACTGCTAGAGCACATTT+TGG + tig0030956:39230-39249 Msa1445190:intron 35.0%
!!! TAGAGCACATTTTGGTTACT+TGG + tig0030956:39238-39257 Msa1445190:intron 35.0%
GATTACTCTATGTAAGACAG+TGG + tig0030956:39833-39852 Msa1445190:CDS 35.0%
CAAAAGATCAATTGCCAAGA+TGG + tig0030956:39928-39947 Msa1445190:CDS 35.0%
ATGAGTTACTTAGTGGGATA+TGG + tig0030956:40027-40046 Msa1445190:CDS 35.0%
TGAGTTACTTAGTGGGATAT+GGG + tig0030956:40028-40047 Msa1445190:CDS 35.0%
AGAGAGAATAAAGGGTTCAT+AGG + tig0030956:40102-40121 Msa1445190:CDS 35.0%
GAGAGAATAAAGGGTTCATA+GGG + tig0030956:40103-40122 Msa1445190:CDS 35.0%
! CAAGGGTATGATAATTGGTA+TGG + tig0030956:40132-40151 Msa1445190:CDS 35.0%
GAACAATTATGTGCAAACTG+AGG + tig0030956:40236-40255 Msa1445190:CDS 35.0%
TTTGCAAAAACTCCCACTAA+TGG - tig0030956:40282-40301 None:intergenic 35.0%
!! TACTTTGAAGCACAACGTTC+TGG + tig0030956:36486-36505 Msa1445190:CDS 40.0%
!! ACTTTGAAGCACAACGTTCT+GGG + tig0030956:36487-36506 Msa1445190:CDS 40.0%
GTTAATTGGCGTCATCATTC+TGG + tig0030956:36531-36550 Msa1445190:CDS 40.0%
!! CATCATTCTGGTCTTACAGA+TGG + tig0030956:36543-36562 Msa1445190:CDS 40.0%
!!! TGGGTTTGTGTTTTTTCAGG+TGG + tig0030956:36668-36687 Msa1445190:intron 40.0%
GCAGGTGATCATGTGAAATT+TGG + tig0030956:36714-36733 Msa1445190:CDS 40.0%
! CATGGAGTGCTATTGAGTTT+AGG + tig0030956:36769-36788 Msa1445190:CDS 40.0%
AGGCAAGAAATTGTTGAAGC+TGG + tig0030956:36789-36808 Msa1445190:CDS 40.0%
ATTGTTGAAGCTGGTGAACT+TGG + tig0030956:36798-36817 Msa1445190:CDS 40.0%
TGGTGAACTTGGTCATGTAA+TGG + tig0030956:36809-36828 Msa1445190:CDS 40.0%
ATACTAGCCCAAATGTGTTG+TGG + tig0030956:36871-36890 Msa1445190:intron 40.0%
TACTAGCCCAAATGTGTTGT+GGG + tig0030956:36872-36891 Msa1445190:intron 40.0%
GATTAGACATGTCACAGTGT+CGG - tig0030956:37032-37051 None:intergenic 40.0%
GAGACACAGACCATTATTGT+TGG + tig0030956:37239-37258 Msa1445190:CDS 40.0%
ACTATAGTGGCACTAGTGTT+TGG + tig0030956:37461-37480 Msa1445190:intron 40.0%
! GACATATTCATGGACTACAG+TGG + tig0030956:37815-37834 Msa1445190:intron 40.0%
GGCATTGTCTCGCATATTTA+AGG + tig0030956:37836-37855 Msa1445190:intron 40.0%
AGTTTGGGGACAAATACAGA+GGG + tig0030956:38123-38142 Msa1445190:CDS 40.0%
! GGGAAATATGATGGAAGTGT+TGG + tig0030956:38143-38162 Msa1445190:CDS 40.0%
! GCTCATACATTTGGTGGTAT+TGG + tig0030956:38284-38303 Msa1445190:CDS 40.0%
GTCCATAACAGAATTCAGCT+GGG + tig0030956:38310-38329 Msa1445190:CDS 40.0%
ATCCCAGCTGAATTCTGTTA+TGG - tig0030956:38315-38334 None:intergenic 40.0%
! TTCAATGGCTTATTTCTCGC+TGG + tig0030956:38553-38572 Msa1445190:intron 40.0%
TAGACTGCATCAATTGCACA+TGG - tig0030956:38768-38787 None:intergenic 40.0%
CAACCTTTCAACTCATCATG+AGG + tig0030956:39114-39133 Msa1445190:intron 40.0%
! TTGCCTCATGATGAGTTGAA+AGG - tig0030956:39120-39139 None:intergenic 40.0%
CATGAGGCAAGCTATTACTA+TGG + tig0030956:39130-39149 Msa1445190:intron 40.0%
! AAGGGTGTATTCCATGAATG+TGG - tig0030956:39164-39183 None:intergenic 40.0%
! GTGCTCTAGCAGTTTTACAA+TGG - tig0030956:39226-39245 None:intergenic 40.0%
!! GCACAATGATTGATAGTGGA+TGG + tig0030956:39356-39375 Msa1445190:intron 40.0%
TAACAAATGGATCAAGGGCA+AGG - tig0030956:39412-39431 None:intergenic 40.0%
!!! TGGATAGTGGGCCTTTATTT+TGG + tig0030956:39437-39456 Msa1445190:intron 40.0%
!!! GGATAGTGGGCCTTTATTTT+GGG + tig0030956:39438-39457 Msa1445190:intron 40.0%
! GAAAGTTGATCCCTTTGCAT+AGG - tig0030956:39495-39514 None:intergenic 40.0%
!! CTTTTAGAAATGTGGGAGTG+TGG - tig0030956:39517-39536 None:intergenic 40.0%
CTTACATAGAGTAATCCAGC+TGG - tig0030956:39829-39848 None:intergenic 40.0%
AATTGCCAAGATGGGATTGT+GGG + tig0030956:39937-39956 Msa1445190:CDS 40.0%
! GCACACAAGGGTATGATAAT+TGG + tig0030956:40127-40146 Msa1445190:CDS 40.0%
!!! ATTTTGGTTGGAGCTTTGGT+AGG + tig0030956:40177-40196 Msa1445190:CDS 40.0%
TCATGCAAAGAGGGAATAGA+AGG + tig0030956:40304-40323 Msa1445190:CDS 40.0%
GATGACGCCAATTAACACGT+TGG - tig0030956:36527-36546 None:intergenic 45.0%
! TTTCAGGTGGATTTGGTTGG+AGG + tig0030956:36681-36700 Msa1445190:intron 45.0%
! TTCAGGTGGATTTGGTTGGA+GGG + tig0030956:36682-36701 Msa1445190:intron 45.0%
ACTGTGACATGTCTAATCCG+AGG + tig0030956:37034-37053 Msa1445190:intron 45.0%
GTCTCACAAGCTATGAAGCA+CGG - tig0030956:37065-37084 None:intergenic 45.0%
CTGGACGTTGCCAACAATAA+TGG - tig0030956:37252-37271 None:intergenic 45.0%
TTATTGTTGGCAACGTCCAG+AGG + tig0030956:37252-37271 Msa1445190:CDS 45.0%
GAAGAATCCAGGTTCAGATC+TGG + tig0030956:37312-37331 Msa1445190:CDS 45.0%
TGGAGAAACTTCTGCAGCTA+TGG + tig0030956:37336-37355 Msa1445190:CDS 45.0%
CAGCTGCTTCCATTGTGTTT+AGG + tig0030956:37359-37378 Msa1445190:CDS 45.0%
TTACTACTACCTGCTGAGCA+TGG - tig0030956:37420-37439 None:intergenic 45.0%
AGTGGCACTAGTGTTTGGTT+TGG + tig0030956:37466-37485 Msa1445190:intron 45.0%
GTGGGGTATGAAGTATGAAC+TGG + tig0030956:37965-37984 Msa1445190:intron 45.0%
GAGTTTGGGGACAAATACAG+AGG + tig0030956:38122-38141 Msa1445190:CDS 45.0%
AGTGAAGAGCTACTATGCGT+CGG + tig0030956:38169-38188 Msa1445190:CDS 45.0%
AGTTATTGTGGGGAGCTATG+TGG + tig0030956:38210-38229 Msa1445190:CDS 45.0%
GGTCCATAACAGAATTCAGC+TGG + tig0030956:38309-38328 Msa1445190:CDS 45.0%
AGCTGGGATGTTAAGTATGC+TGG + tig0030956:38326-38345 Msa1445190:CDS 45.0%
GTCTCATTTCACGTTCCTCT+AGG + tig0030956:38418-38437 Msa1445190:intron 45.0%
CATTTCACGTTCCTCTAGGT+TGG + tig0030956:38422-38441 Msa1445190:intron 45.0%
TGTGCCTTCTACCTATGCAA+AGG + tig0030956:39481-39500 Msa1445190:intron 45.0%
GTGCCTTCTACCTATGCAAA+GGG + tig0030956:39482-39501 Msa1445190:intron 45.0%
GATCCCTTTGCATAGGTAGA+AGG - tig0030956:39488-39507 None:intergenic 45.0%
AAACAATGGCAGCAGCAATG+TGG + tig0030956:39795-39814 Msa1445190:CDS 45.0%
AATGTGGAAAGAACACCAGC+TGG + tig0030956:39811-39830 Msa1445190:CDS 45.0%
CAATTGCCAAGATGGGATTG+TGG + tig0030956:39936-39955 Msa1445190:CDS 45.0%
! CTCTATGATGCACCCTTTTG+GGG - tig0030956:40062-40081 None:intergenic 45.0%
! CCTCTATGATGCACCCTTTT+GGG - tig0030956:40063-40082 None:intergenic 45.0%
! ACCTCTATGATGCACCCTTT+TGG - tig0030956:40064-40083 None:intergenic 45.0%
GCAAAGAGGGAATAGAAGGT+TGG + tig0030956:40308-40327 Msa1445190:CDS 45.0%
! TTGAAGCACAACGTTCTGGG+AGG + tig0030956:36490-36509 Msa1445190:CDS 50.0%
!! GTTGGAGGGTACTATGATGC+AGG + tig0030956:36696-36715 Msa1445190:CDS 50.0%
CCTCTGCCCACAACACATTT+GGG - tig0030956:36881-36900 None:intergenic 50.0%
ACCTCTGCCCACAACACATT+TGG - tig0030956:36882-36901 None:intergenic 50.0%
TATGAAGCACGGACACTCCT+CGG - tig0030956:37054-37073 None:intergenic 50.0%
CTTGAGGTTGTCATGTCCTC+TGG - tig0030956:37271-37290 None:intergenic 50.0%
AATCCAGGTTCAGATCTGGC+TGG + tig0030956:37316-37335 Msa1445190:CDS 50.0%
! ACTTTTGCACCATGCTCAGC+AGG + tig0030956:37408-37427 Msa1445190:CDS 50.0%
!! GGCACTAGTGTTTGGTTTGG+TGG + tig0030956:37469-37488 Msa1445190:intron 50.0%
TGGTGTGTGCTCCACATTCA+TGG + tig0030956:39150-39169 Msa1445190:intron 50.0%
ATGGGCCTAAGTACCCCAAA+AGG + tig0030956:40046-40065 Msa1445190:CDS 50.0%
TGGGCCTAAGTACCCCAAAA+GGG + tig0030956:40047-40066 Msa1445190:CDS 50.0%
!!! TGCACCCTTTTGGGGTACTT+AGG - tig0030956:40054-40073 None:intergenic 50.0%
! CCCAAAAGGGTGCATCATAG+AGG + tig0030956:40060-40079 Msa1445190:CDS 50.0%
GGTTCATAGGGTGCACACAA+GGG + tig0030956:40115-40134 Msa1445190:CDS 50.0%
! TTGGTTGGAGCTTTGGTAGG+AGG + tig0030956:40180-40199 Msa1445190:CDS 50.0%
CCCAAATGTGTTGTGGGCAG+AGG + tig0030956:36878-36897 Msa1445190:intron 55.0%
TCTCCAGCCAGATCTGAACC+TGG - tig0030956:37322-37341 None:intergenic 55.0%
! AGCTACTATGCGTCGGTGAG+TGG + tig0030956:38176-38195 Msa1445190:CDS 55.0%
! TGCGTCGGTGAGTGGATACA+TGG + tig0030956:38184-38203 Msa1445190:CDS 55.0%
CATGGCCCACAATCCCATCT+TGG - tig0030956:39945-39964 None:intergenic 55.0%
GGGTTCATAGGGTGCACACA+AGG + tig0030956:40114-40133 Msa1445190:CDS 55.0%
Chromosome Type Strat End Strand Name
tig0030956 gene 36216 40587 36216 ID=Msa1445190;Name=Msa1445190
tig0030956 mRNA 36216 40587 36216 ID=Msa1445190-mRNA-1;Parent=Msa1445190;Name=Msa1445190-mRNA-1;_AED=0.23;_eAED=0.23;_QI=120|0.5|0.6|1|0.75|0.8|5|219|515
tig0030956 exon 36216 36578 36216 ID=Msa1445190-mRNA-1:exon:14846;Parent=Msa1445190-mRNA-1
tig0030956 exon 36687 36884 36687 ID=Msa1445190-mRNA-1:exon:14847;Parent=Msa1445190-mRNA-1
tig0030956 exon 37229 37429 37229 ID=Msa1445190-mRNA-1:exon:14848;Parent=Msa1445190-mRNA-1
tig0030956 exon 38116 38355 38116 ID=Msa1445190-mRNA-1:exon:14849;Parent=Msa1445190-mRNA-1
tig0030956 exon 39703 40587 39703 ID=Msa1445190-mRNA-1:exon:14850;Parent=Msa1445190-mRNA-1
tig0030956 five_prime_UTR 36216 36335 36216 ID=Msa1445190-mRNA-1:five_prime_utr;Parent=Msa1445190-mRNA-1
tig0030956 CDS 36336 36578 36336 ID=Msa1445190-mRNA-1:cds;Parent=Msa1445190-mRNA-1
tig0030956 CDS 36687 36884 36687 ID=Msa1445190-mRNA-1:cds;Parent=Msa1445190-mRNA-1
tig0030956 CDS 37229 37429 37229 ID=Msa1445190-mRNA-1:cds;Parent=Msa1445190-mRNA-1
tig0030956 CDS 38116 38355 38116 ID=Msa1445190-mRNA-1:cds;Parent=Msa1445190-mRNA-1
tig0030956 CDS 39703 40368 39703 ID=Msa1445190-mRNA-1:cds;Parent=Msa1445190-mRNA-1
tig0030956 three_prime_UTR 40369 40587 40369 ID=Msa1445190-mRNA-1:three_prime_utr;Parent=Msa1445190-mRNA-1
Gene Sequence

>Msa1445190

ATGAAGAATGAGAGACAACAACAACATCATAGAGCTTCTAAAATTCCCAGATTTAAACATCATTGTCACATTTTTCTCTTCATTTTGTTCACTCTTTTTTCCATAACACAATCTTTTGATTATGCTGATGCACTTTCAAAAAGTCTTCTTTACTTTGAAGCACAACGTTCTGGGAGGTTACCATACAACCAACGTGTTAATTGGCGTCATCATTCTGGTCTTACAGATGGTTTAGAACAAGGGGTGGATTTGGTTGGAGGGTACTATGATGCAGGTGATCATGTGAAATTTGGTTTACCAATGGCATTTACTGTCACAATGTTGTCATGGAGTGCTATTGAGTTTAGGCAAGAAATTGTTGAAGCTGGTGAACTTGGTCATGTAATGGAAGCAATTAAATGGGGAACTGATTATTTCATCAAAGCTCATACTAGCCCAAATGTGGGTGATGGAGACACAGACCATTATTGTTGGCAACGTCCAGAGGACATGACAACCTCAAGACAAGCTTTTAAGATAGATGAGAAGAATCCAGGTTCAGATCTGGCTGGAGAAACTTCTGCAGCTATGGCAGCTGCTTCCATTGTGTTTAGGAAAACAAATCCACATTATTCTCAGCTACTTTTGCACCATGCTCAGCAGTTATTTGAGTTTGGGGACAAATACAGAGGGAAATATGATGGAAGTGTTGGAGTAGTGAAGAGCTACTATGCGTCGGTGAGTGGATACATGGATGAGTTATTGTGGGGAGCTATGTGGTTGTACAAAGCCACCGACAAACAAGAATATTTTGACTACATTATTTCTAATGCTCATACATTTGGTGGTATTGGTTGGTCCATAACAGAATTCAGCTGGGATGTTAAGTATGCTGGTCTCCAATTTTTGATGGATGCAAAACACAATAAGCATGCTGATTTACTAGAACAGTACAAATCAAAAGCAGAGTACTATATATGTTCATGTCTCAACAAAAACAATGGCAGCAGCAATGTGGAAAGAACACCAGCTGGATTACTCTATGTAAGACAGTGGAACAACATGCAATATGTTTCTACAGCAGCATTTCTACTCACAGTTTACTCTGATTTTCTCCAAAGTGAGAATCAAAAGATCAATTGCCAAGATGGGATTGTGGGCCATGATGAAATTCTCAATTTTGCCAAGTCACAAGTTGATTACATTTTGGGCCAAAATCCACTTAACATGAGTTACTTAGTGGGATATGGGCCTAAGTACCCCAAAAGGGTGCATCATAGAGGTGCATCCATTGTATCATATAGAGAGAATAAAGGGTTCATAGGGTGCACACAAGGGTATGATAATTGGTATGGTGTCCAAGAACCAAATCCTAATATTTTGGTTGGAGCTTTGGTAGGAGGACCTGATAATCTAGACAATTTTGAGGATCAAAGGAACAATTATGTGCAAACTGAGGCTTGCACATATAATACTGCACCATTAGTGGGAGTTTTTGCAAAATTCATGCAAAGAGGGAATAGAAGGTTGGTTCATGATTCTGATTCACTTTTAGTTGCTTCCTTTTAA

Protein sequence

>Msa1445190

MKNERQQQHHRASKIPRFKHHCHIFLFILFTLFSITQSFDYADALSKSLLYFEAQRSGRLPYNQRVNWRHHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWSAIEFRQEIVEAGELGHVMEAIKWGTDYFIKAHTSPNVGDGDTDHYCWQRPEDMTTSRQAFKIDEKNPGSDLAGETSAAMAAASIVFRKTNPHYSQLLLHHAQQLFEFGDKYRGKYDGSVGVVKSYYASVSGYMDELLWGAMWLYKATDKQEYFDYIISNAHTFGGIGWSITEFSWDVKYAGLQFLMDAKHNKHADLLEQYKSKAEYYICSCLNKNNGSSNVERTPAGLLYVRQWNNMQYVSTAAFLLTVYSDFLQSENQKINCQDGIVGHDEILNFAKSQVDYILGQNPLNMSYLVGYGPKYPKRVHHRGASIVSYRENKGFIGCTQGYDNWYGVQEPNPNILVGALVGGPDNLDNFEDQRNNYVQTEACTYNTAPLVGVFAKFMQRGNRRLVHDSDSLLVASF*