AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0194000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0194000 MtrunA17_Chr2g0284451 90.444 293 24 2 427 719 7 295 1.72e-172 495
Msa0194000 MtrunA17_Chr2g0284451 41.156 294 123 12 5 259 7 289 1.83e-46 167
Msa0194000 MtrunA17_Chr2g0284451 45.455 187 71 5 257 412 71 257 1.12e-34 134
Msa0194000 MtrunA17_Chr2g0284431 87.454 271 18 4 1 255 22 292 3.39e-130 387
Msa0194000 MtrunA17_Chr2g0284431 84.390 205 12 2 255 439 87 291 1.57e-110 337
Msa0194000 MtrunA17_Chr2g0284431 46.460 226 104 5 491 715 89 298 8.72e-54 187
Msa0194000 MtrunA17_Chr2g0284411 89.630 270 12 4 1 254 1 270 1.17e-127 380
Msa0194000 MtrunA17_Chr2g0284411 83.495 206 14 2 255 440 66 271 4.80e-110 335
Msa0194000 MtrunA17_Chr2g0284411 53.927 191 73 5 491 681 68 243 4.21e-53 184
Msa0194000 MtrunA17_Chr8g0379621 60.870 322 80 9 429 718 9 316 2.13e-108 332
Msa0194000 MtrunA17_Chr8g0379621 46.444 239 87 9 1 199 5 242 4.64e-46 166
Msa0194000 MtrunA17_Chr8g0379621 42.791 215 86 7 257 435 93 306 2.25e-36 139
Msa0194000 MtrunA17_Chr8g0379631 61.180 322 79 10 429 718 9 316 1.18e-107 330
Msa0194000 MtrunA17_Chr8g0379631 46.025 239 88 9 1 199 5 242 2.45e-44 162
Msa0194000 MtrunA17_Chr8g0379631 42.791 215 86 7 257 435 93 306 2.43e-36 139
Msa0194000 MtrunA17_Chr8g0379611 70.866 254 48 5 19 246 19 272 2.85e-88 280
Msa0194000 MtrunA17_Chr8g0379611 69.802 202 40 3 256 436 76 277 2.70e-70 232
Msa0194000 MtrunA17_Chr8g0379611 43.333 240 113 4 484 715 62 286 4.56e-52 183
Msa0194000 MtrunA17_Chr4g0026611 48.333 300 125 8 428 713 8 291 1.54e-66 221
Msa0194000 MtrunA17_Chr4g0026611 51.210 248 87 7 3 220 8 251 9.69e-59 200
Msa0194000 MtrunA17_Chr4g0026611 55.114 176 51 4 257 405 77 251 1.38e-49 176
Msa0194000 MtrunA17_Chr4g0029501 44.224 303 141 8 426 713 1 290 2.13e-65 218
Msa0194000 MtrunA17_Chr4g0029501 50.996 251 96 5 1 224 4 254 1.56e-62 211
Msa0194000 MtrunA17_Chr4g0029501 50.237 211 76 4 257 438 73 283 7.77e-53 184
Msa0194000 MtrunA17_Chr2g0326411 41.914 303 138 6 430 715 7 288 9.43e-64 214
Msa0194000 MtrunA17_Chr2g0326411 43.816 283 124 7 2 255 6 282 4.69e-57 196
Msa0194000 MtrunA17_Chr2g0326411 45.161 217 87 4 257 441 69 285 1.65e-44 161
Msa0194000 MtrunA17_Chr4g0029441 49.194 248 102 7 443 678 22 257 2.83e-61 207
Msa0194000 MtrunA17_Chr4g0029441 52.727 220 77 5 50 242 53 272 4.81e-60 204
Msa0194000 MtrunA17_Chr4g0029441 49.289 211 78 4 257 438 73 283 6.04e-52 182
Msa0194000 MtrunA17_Chr4g0029331 52.423 227 69 5 425 648 20 210 7.84e-61 205
Msa0194000 MtrunA17_Chr4g0029331 46.602 206 69 7 7 199 31 208 6.99e-41 150
Msa0194000 MtrunA17_Chr4g0029331 49.324 148 54 3 257 384 62 208 1.10e-33 130
Msa0194000 MtrunA17_Chr2g0326421 47.653 277 121 8 1 255 1 275 1.31e-56 194
Msa0194000 MtrunA17_Chr2g0326421 45.238 252 115 7 451 701 37 266 1.26e-54 189
Msa0194000 MtrunA17_Chr2g0326421 47.847 209 84 5 257 441 69 276 7.10e-44 159
Msa0194000 MtrunA17_Chr2g0326431 60.127 158 54 2 491 648 41 189 7.33e-56 191
Msa0194000 MtrunA17_Chr2g0326431 52.349 149 57 3 64 199 40 187 4.64e-38 142
Msa0194000 MtrunA17_Chr2g0326431 48.649 148 55 3 257 384 41 187 8.16e-33 127
Msa0194000 MtrunA17_Chr4g0029431 51.587 252 99 7 22 252 23 272 1.78e-50 177
Msa0194000 MtrunA17_Chr4g0029431 53.125 192 74 5 455 646 39 214 1.15e-49 175
Msa0194000 MtrunA17_Chr4g0029431 52.980 151 51 2 254 384 64 214 7.82e-37 139
Msa0194000 MtrunA17_Chr7g0263981 47.674 172 79 4 476 646 26 187 1.16e-40 149
Msa0194000 MtrunA17_Chr7g0263981 41.379 174 73 5 38 197 27 185 6.36e-28 113
Msa0194000 MtrunA17_Chr7g0263981 42.177 147 63 4 257 382 40 185 1.61e-24 103
Msa0194000 MtrunA17_Chr2g0325021 32.946 258 130 9 470 712 20 249 1.01e-25 106
Msa0194000 MtrunA17_Chr2g0325021 37.278 169 78 5 41 196 28 181 1.44e-14 74.3
Msa0194000 MtrunA17_Chr2g0325021 36.552 145 71 3 257 381 38 181 2.76e-11 64.7
Msa0194000 MtrunA17_Chr5g0448001 31.395 172 104 4 490 659 47 206 2.41e-16 79.7
Msa0194000 MtrunA17_Chr7g0246041 33.152 184 96 6 485 659 178 343 1.77e-15 79.3
Msa0194000 MtrunA17_Chr2g0296571 30.000 170 99 5 481 646 190 343 9.69e-13 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0194000 AT5G03170.1 49.738 191 82 6 478 667 26 203 3.02e-46 165
Msa0194000 AT5G03170.1 37.004 227 97 6 7 219 9 203 5.44e-31 122
Msa0194000 AT5G03170.1 42.012 169 76 4 257 404 36 203 1.35e-28 115
Msa0194000 AT5G60490.1 52.597 154 63 3 491 643 39 183 3.42e-43 157
Msa0194000 AT5G60490.1 47.518 141 62 3 64 193 38 177 2.29e-29 117
Msa0194000 AT5G60490.1 45.000 140 58 3 257 378 39 177 1.85e-25 106
Msa0194000 AT5G44130.1 38.571 210 113 4 490 698 35 229 9.65e-30 118
Msa0194000 AT5G44130.1 38.974 195 99 7 65 240 36 229 2.69e-24 103
Msa0194000 AT5G44130.1 37.436 195 95 6 257 425 36 229 1.25e-22 98.2
Msa0194000 AT2G20520.1 38.532 218 116 7 467 677 17 223 6.47e-29 116
Msa0194000 AT2G20520.1 36.364 187 96 8 49 216 19 201 6.79e-16 78.6
Msa0194000 AT2G20520.1 34.010 197 93 8 257 421 38 229 6.28e-14 72.8
Msa0194000 AT1G03870.1 33.628 226 128 5 490 714 38 242 2.60e-27 111
Msa0194000 AT1G03870.1 35.484 186 100 7 65 236 39 218 5.08e-18 84.7
Msa0194000 AT1G03870.1 33.871 186 96 6 257 421 39 218 2.47e-16 79.7
Msa0194000 AT3G46550.1 34.066 182 105 5 482 659 198 368 5.48e-18 87.4
Msa0194000 AT4G12730.1 29.534 193 119 6 531 713 218 403 8.02e-11 65.1

Find 170 sgRNAs with CRISPR-Local

Find 408 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGCTGGAGCTGGCGTGGC+AGG 0.213569 2_1:-9854915 None:intergenic
ATGTCTATGGATGGTGATTT+TGG 0.215958 2_1:-9860344 None:intergenic
CAACTTAATGTAACCACTTC+TGG 0.262903 2_1:+9860689 Msa0194000:CDS
GGGGCCCCACTTGGGGATAC+TGG 0.273802 2_1:-9860305 None:intergenic
CATATGAATGTGACTGCTTA+TGG 0.274154 2_1:+9855311 Msa0194000:CDS
CATATGAATGTGACTGCTTA+TGG 0.274154 2_1:+9858222 Msa0194000:CDS
TCACTAGCTGTGAGTTAATT+TGG 0.274822 2_1:-9857993 None:intergenic
TTGCTGGAGCTGGCGTGGCA+GGG 0.274945 2_1:-9854914 None:intergenic
TTTGAAAAGGCACTGTCTTC+TGG 0.282142 2_1:-9860515 None:intergenic
TCACCAGCTGTGAGTTAATT+TGG 0.285640 2_1:-9855082 None:intergenic
GTCTGTCACTGAGGGAATTA+AGG 0.293100 2_1:-9860553 None:intergenic
CTTGCCAGTGATAGCCCTTC+TGG 0.294408 2_1:+9855284 Msa0194000:CDS
GCCGGTGCTGTTGCTGGAGC+TGG 0.297976 2_1:-9854924 None:intergenic
TCCTTGACGGTTAATCAAAT+TGG 0.306881 2_1:-9855567 None:intergenic
AACAATGTAAATATATCAAC+TGG 0.312561 2_1:+9855335 Msa0194000:CDS
GAGGATTTGGATAATGTCTA+TGG 0.319762 2_1:-9860357 None:intergenic
GAACTATCCTTAGCAGCTTT+AGG 0.328798 2_1:-9855494 None:intergenic
TGATAAGGTGCTTATTCCTT+TGG 0.335490 2_1:+9858332 Msa0194000:intron
GGAGCTGGCGTGGCAGGGGC+AGG 0.344057 2_1:-9854909 None:intergenic
CAACAAACTAGCTGTATATC+AGG 0.345531 2_1:+9860778 Msa0194000:CDS
CTTGCCAGTGATAGCCCTTC+TGG 0.345918 2_1:+9858195 Msa0194000:CDS
AACAATGTGAATATATCAAC+TGG 0.346164 2_1:+9858246 Msa0194000:CDS
CCCTCATCCGATTCATCTTC+CGG 0.349916 2_1:+9854978 Msa0194000:CDS
TTAGGTGCCTTTGCCGTAGA+AGG 0.356569 2_1:-9855476 None:intergenic
TGATAAGGTGCTTATCCCTT+TGG 0.356772 2_1:+9855421 Msa0194000:intron
GCTGTTAACGCAACCGTTAC+AGG 0.357416 2_1:+9860740 Msa0194000:CDS
TACATTAAGTTGTAACCGTT+TGG 0.376789 2_1:-9860678 None:intergenic
CCTGTGAGTGTAGCATTAAC+AGG 0.382985 2_1:-9858270 None:intergenic
TGAGGTAATGAGGGGACTAA+TGG 0.391231 2_1:-9854951 None:intergenic
TCACCAGCTTGTGTTTGAAC+CGG 0.397830 2_1:-9860650 None:intergenic
CCTGCAGAAGCTTCTGGTGC+TGG 0.401485 2_1:+9860953 Msa0194000:CDS
TTCATCTGAAGATGGTGATC+AGG 0.406962 2_1:+9855514 Msa0194000:CDS
GAACTATCCTTATCAGCTTT+AGG 0.420123 2_1:-9858405 None:intergenic
GACTTGCCTGCAGAAGCTTC+TGG 0.421044 2_1:+9860947 Msa0194000:CDS
GGAGCAGGAGCTAGAGCCTT+AGG 0.421990 2_1:-9858366 None:intergenic
ACACAAACATTGTTCCTTGA+CGG 0.432040 2_1:-9855580 None:intergenic
GGAGCAGGAGCTAGAGCCTT+AGG 0.432560 2_1:-9855455 None:intergenic
TTTGGATTTCTCTAAGCCTA+AGG 0.436103 2_1:+9858350 Msa0194000:CDS
GATGAATCTCCTTTAGAAAC+CGG 0.436210 2_1:-9860866 None:intergenic
TGCTGGAGCTGGCGTGGCAG+GGG 0.436414 2_1:-9854913 None:intergenic
CTTTCTGTTGGCGTTCGCCA+AGG 0.437630 2_1:-9858095 None:intergenic
TGCGAAAAGGCACCATCATC+AGG 0.437953 2_1:-9855137 None:intergenic
GAAGTATCCGGCTTTGAGTT+GGG 0.438548 2_1:-9858067 None:intergenic
TCCTGCTCCTGCTACGGCGA+AGG 0.440885 2_1:+9858380 Msa0194000:CDS
TTAGGCGCCTTCGCCGTAGC+AGG 0.446841 2_1:-9858387 None:intergenic
ACTGTATCAGTTCTTTCTGT+TGG 0.447264 2_1:-9855196 None:intergenic
ACTGTATCAGTTCTTTCTGT+TGG 0.447264 2_1:-9858107 None:intergenic
TGGGAAAAGGCACCATCATC+AGG 0.449115 2_1:-9858048 None:intergenic
GCGGCTTTAGGTGCTGCAGC+AGG 0.450878 2_1:-9854879 None:intergenic
GCCAGCTCCAGCAACAGCAC+CGG 0.451213 2_1:+9854923 Msa0194000:CDS
TCCGGCTTTGAGTTGGGAAA+AGG 0.452280 2_1:-9858061 None:intergenic
GAGACAACTAAAGCTACTTC+TGG 0.452965 2_1:+9855539 Msa0194000:CDS
GAGACAACTAAAGCTACTTC+TGG 0.452965 2_1:+9858450 Msa0194000:CDS
TGTTTGAACCGGGTTGGTTA+AGG 0.453918 2_1:-9860639 None:intergenic
GCCTTCGCCGTAGCAGGAGC+AGG 0.456420 2_1:-9858381 None:intergenic
TAACTATTTGTGAGTTGAGT+TGG 0.460271 2_1:-9860439 None:intergenic
TCCTGCACTTGCACCTGCAC+CGG 0.461846 2_1:+9860847 Msa0194000:CDS
CACCAGCTTGTGTTTGAACC+GGG 0.466085 2_1:-9860649 None:intergenic
GATGACTTGCTTCTATCATC+AGG 0.467697 2_1:-9860893 None:intergenic
TGGGATAATACTAGGGGTGG+GGG 0.470197 2_1:-9860324 None:intergenic
CCTGTTAATGCTACACTCAC+AGG 0.472842 2_1:+9858270 Msa0194000:CDS
ACCGGTGCAGGTGCAAGTGC+AGG 0.474053 2_1:-9860848 None:intergenic
TTTGGACTTCTCTAAGCCTA+AGG 0.478601 2_1:+9855439 Msa0194000:CDS
GCCAAGGGAGTTGAAGTATC+CGG 0.481250 2_1:-9858079 None:intergenic
GCACCTGCACCGGTTTCTAA+AGG 0.482663 2_1:+9860857 Msa0194000:CDS
TTTCTGTTGGCGTTCGCCGA+GGG 0.486603 2_1:-9855183 None:intergenic
GAATCGGATGAGGGTGATTG+AGG 0.487257 2_1:-9854969 None:intergenic
TTTCTGTTGGCGTTCGCCAA+GGG 0.488696 2_1:-9858094 None:intergenic
CTGAGGGAATTAAGGAAACC+TGG 0.491886 2_1:-9860545 None:intergenic
TGAAGTATCCGGCTTTGAGT+TGG 0.493632 2_1:-9858068 None:intergenic
GCCGAGGGAATTGAAGTATC+CGG 0.494579 2_1:-9855168 None:intergenic
ACCATCCTTGCACCTGATGA+TGG 0.495059 2_1:+9858036 Msa0194000:CDS
CCTGTCAATGCTACACTCAC+AGG 0.495470 2_1:+9855359 Msa0194000:CDS
GAGTTGTGCTGAGGTGGTAG+TGG 0.496520 2_1:-9860219 None:intergenic
AGCCATGTTAGTATGACAAC+TGG 0.497715 2_1:+9860716 Msa0194000:CDS
GCAAGTGCAGGAGCTTTAGC+AGG 0.504101 2_1:-9860836 None:intergenic
GCCGGATACTTCAACTCCCT+TGG 0.504856 2_1:+9858078 Msa0194000:CDS
TGCTGTTGCTGGAGCTGGCG+TGG 0.504987 2_1:-9854919 None:intergenic
TACTTTGTGTCTGTCACTGA+GGG 0.508476 2_1:-9860561 None:intergenic
ACCATCCTCGCACCTGATGA+TGG 0.509691 2_1:+9855125 Msa0194000:CDS
AGCTTGTGTTTGAACCGGGT+TGG 0.515091 2_1:-9860645 None:intergenic
TTGGGATAATACTAGGGGTG+GGG 0.515374 2_1:-9860325 None:intergenic
CTTTCTGTTGGCGTTCGCCG+AGG 0.515455 2_1:-9855184 None:intergenic
GTCTTGACCGGAAGATGAAT+CGG 0.516491 2_1:-9854985 None:intergenic
TCCGGCTTTGAGCTGCGAAA+AGG 0.516768 2_1:-9855150 None:intergenic
GAGGGTGATTGAGGTAATGA+GGG 0.517617 2_1:-9854960 None:intergenic
TTGACGGTTAATCAAATTGG+TGG 0.520132 2_1:-9855564 None:intergenic
TCACTGGCAAGGGTCAGCAC+CGG 0.522281 2_1:-9855272 None:intergenic
TGCTGGTTATTCAAACATGA+AGG 0.522342 2_1:+9860970 Msa0194000:CDS
TCATCTGAAGATGGTGATCA+AGG 0.523011 2_1:+9858426 Msa0194000:CDS
ACACAAGTAATGTGCTTTGA+AGG 0.524778 2_1:-9858491 None:intergenic
CACTGGCAAGGGTCAGCACC+GGG 0.525133 2_1:-9855271 None:intergenic
GCCTTTGCCGTAGAAGGAGC+AGG 0.528366 2_1:-9855470 None:intergenic
ACTGTGTTGAAACCTGGTGC+TGG 0.536826 2_1:-9860272 None:intergenic
ACCGGAAGATGAATCGGATG+AGG 0.537067 2_1:-9854979 None:intergenic
CCTGTGAGTGTAGCATTGAC+AGG 0.537325 2_1:-9855359 None:intergenic
TCACTGGCAAGCGTCAGCAC+AGG 0.539371 2_1:-9858183 None:intergenic
AAAGGCACCTAAAGCTGCTA+AGG 0.539751 2_1:+9855487 Msa0194000:CDS
AAACATGAAGGGAATGTGGC+TGG 0.539849 2_1:+9860982 Msa0194000:CDS
TTGTACCAGTATCCCCAAGT+GGG 0.540353 2_1:+9860300 Msa0194000:CDS
TGAGGGTGATTGAGGTAATG+AGG 0.542427 2_1:-9854961 None:intergenic
TCCTGCTCCTTCTACGGCAA+AGG 0.542480 2_1:+9855469 Msa0194000:CDS
GAAGGCGCCTAAAGCTGATA+AGG 0.542783 2_1:+9858398 Msa0194000:CDS
TCTAGCTCCTGCTCCTGCTA+CGG 0.543999 2_1:+9858374 Msa0194000:CDS
ACCATCATCAGGTGCGAGGA+TGG 0.547005 2_1:-9855126 None:intergenic
TCATCTGAAGATGGTGATCA+GGG 0.549789 2_1:+9855515 Msa0194000:CDS
ACTTGGGGATACTGGTACAA+GGG 0.551131 2_1:-9860297 None:intergenic
GCCGGATACTTCAATTCCCT+CGG 0.551733 2_1:+9855167 Msa0194000:CDS
TCTAGCTCCTGCTCCTTCTA+CGG 0.551944 2_1:+9855463 Msa0194000:CDS
ACCATCATCAGGTGCAAGGA+TGG 0.555167 2_1:-9858037 None:intergenic
AACCCGGTTCAAACACAAGC+TGG 0.563882 2_1:+9860647 Msa0194000:CDS
TTAGGCTTAGAGAAGTCCAA+AGG 0.564111 2_1:-9855437 None:intergenic
CAGAAGGGCTATCACTGGCA+AGG 0.567443 2_1:-9855283 None:intergenic
CACTTGGGGATACTGGTACA+AGG 0.572766 2_1:-9860298 None:intergenic
AAGGATAGTTCATCTGAAGA+TGG 0.573134 2_1:+9855506 Msa0194000:CDS
CCAGCACCAGAAGCTTCTGC+AGG 0.575502 2_1:-9860953 None:intergenic
AAGGATAGTTCATCTGAAGA+TGG 0.575616 2_1:+9858417 Msa0194000:CDS
TGTGTAAACTGTTCCTGTAA+CGG 0.577811 2_1:-9860753 None:intergenic
CAACCAAATTAACTCACAGC+TGG 0.580266 2_1:+9855079 Msa0194000:CDS
TCTCCTTTAGAAACCGGTGC+AGG 0.582465 2_1:-9860860 None:intergenic
CGCCAGTTGTCATACTAACA+TGG 0.584465 2_1:-9860718 None:intergenic
AAGCAAGTCATCATCATCAA+AGG 0.585762 2_1:+9860904 Msa0194000:CDS
GAGCCTTGTGGAGATTGAAC+TGG 0.585816 2_1:-9860245 None:intergenic
AACATGGCTACCACCAGAAG+TGG 0.588263 2_1:-9860702 None:intergenic
TTTGGGATAATACTAGGGGT+GGG 0.590604 2_1:-9860326 None:intergenic
AAGCTGGTGATGATGCCAAA+CGG 0.591660 2_1:+9860663 Msa0194000:CDS
CAAGGCTCTACACCAGCACC+AGG 0.592984 2_1:+9860260 Msa0194000:CDS
CTGTTAATGCTACACTCACA+GGG 0.594530 2_1:+9858271 Msa0194000:CDS
ACCAATTTGATTAACCGTCA+AGG 0.597144 2_1:+9855566 Msa0194000:CDS
AGGTGGTAGTGGAATAGTAG+AGG 0.597674 2_1:-9860208 None:intergenic
AATTTGGTTGATGATTTGTG+TGG 0.598675 2_1:-9855066 None:intergenic
AATTTGGTTGATGATTTGTG+TGG 0.598675 2_1:-9857977 None:intergenic
ATAACCAGAAGGGCTATCAC+TGG 0.599004 2_1:-9855288 None:intergenic
ATAACCAGAAGGGCTATCAC+TGG 0.599004 2_1:-9858199 None:intergenic
TGGTGAGAGTTGTGCTGAGG+TGG 0.600028 2_1:-9860225 None:intergenic
TCATCAGATTCTAGCAGTGG+TGG 0.601527 2_1:+9860476 Msa0194000:CDS
GTTCGAGATTGAGATGAATG+AGG 0.603007 2_1:-9860609 None:intergenic
CACTGGCAAGCGTCAGCACA+GGG 0.603008 2_1:-9858182 None:intergenic
GCAGGAAGCACAAGATCAAG+AGG 0.606292 2_1:-9860818 None:intergenic
TAGGCTTAGAGAAGTCCAAA+GGG 0.607637 2_1:-9855436 None:intergenic
CCGGAAGATGAATCGGATGA+GGG 0.610068 2_1:-9854978 None:intergenic
AGAAGGGCTATCACTGGCAA+GGG 0.612516 2_1:-9855282 None:intergenic
CTGTCAATGCTACACTCACA+GGG 0.613277 2_1:+9855360 Msa0194000:CDS
AGGCACCATCATCAGGTGCA+AGG 0.615621 2_1:-9858041 None:intergenic
TCATCATCAGATTCTAGCAG+TGG 0.623234 2_1:+9860473 Msa0194000:CDS
AGGGGAACTGTGTTGAAACC+TGG 0.625049 2_1:-9860278 None:intergenic
ATTCAAACATGAAGGGAATG+TGG 0.627234 2_1:+9860978 Msa0194000:CDS
CTTCGACACCTTAACCAACC+CGG 0.629726 2_1:+9860631 Msa0194000:CDS
GCTGGTTATTCAAACATGAA+GGG 0.633452 2_1:+9860971 Msa0194000:CDS
CTTGTACCAGTATCCCCAAG+TGG 0.637536 2_1:+9860299 Msa0194000:CDS
CTTGGGGATACTGGTACAAG+GGG 0.638164 2_1:-9860296 None:intergenic
TGTACCAGTATCCCCAAGTG+GGG 0.638673 2_1:+9860301 Msa0194000:CDS
AGCTGTATATCAGGTTGACA+AGG 0.639083 2_1:+9860787 Msa0194000:CDS
ATTTGGATAATGTCTATGGA+TGG 0.646970 2_1:-9860353 None:intergenic
CATTCATATGATAACCAGAA+GGG 0.647322 2_1:-9855298 None:intergenic
CATTCATATGATAACCAGAA+GGG 0.647322 2_1:-9858209 None:intergenic
AGCAGGTGATTGAGCTGTAG+TGG 0.649922 2_1:-9854862 None:intergenic
CTACTTTGTGTCTGTCACTG+AGG 0.651942 2_1:-9860562 None:intergenic
TTAGGCTTAGAGAAATCCAA+AGG 0.655336 2_1:-9858348 None:intergenic
GGTGCTGGTGTAGAGCCTTG+TGG 0.655706 2_1:-9860257 None:intergenic
CTTAATGTAACCACTTCTGG+TGG 0.658842 2_1:+9860692 Msa0194000:CDS
AGGCACCATCATCAGGTGCG+AGG 0.662037 2_1:-9855130 None:intergenic
AGGGTGATTGAGGTAATGAG+GGG 0.663044 2_1:-9854959 None:intergenic
ACATTCATATGATAACCAGA+AGG 0.665867 2_1:-9855299 None:intergenic
ACATTCATATGATAACCAGA+AGG 0.665867 2_1:-9858210 None:intergenic
AGATGAATGAGGAAAGTGTG+TGG 0.666640 2_1:-9860598 None:intergenic
AACTGGTGAGAGTTGTGCTG+AGG 0.689213 2_1:-9860228 None:intergenic
TCACCAGTTCAATCTCCACA+AGG 0.696002 2_1:+9860242 Msa0194000:CDS
ACAATGTGAATATATCAACT+GGG 0.700774 2_1:+9858247 Msa0194000:CDS
ACAATGTAAATATATCAACT+GGG 0.703213 2_1:+9855336 Msa0194000:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAATTTCAATGTTTA+TGG - chr2_1:9856641-9856660 None:intergenic 10.0%
!! TTTAATATATACAGTTATAT+TGG + chr2_1:9858751-9858770 Msa0194000:intron 10.0%
!!! TATCTTTTAAAAGATTTATT+TGG + chr2_1:9859011-9859030 Msa0194000:intron 10.0%
!!! TTCAAATTTTACTTTGAATA+TGG + chr2_1:9856093-9856112 Msa0194000:intron 15.0%
!!! TTTAAGGTTTTTATATATGT+TGG - chr2_1:9858945-9858964 None:intergenic 15.0%
!! AAAGATCAAAAATATGTTTA+AGG - chr2_1:9858961-9858980 None:intergenic 15.0%
!! CAAAATATACTATACATATT+TGG + chr2_1:9859389-9859408 Msa0194000:intron 15.0%
!! AAAATTATCATATAATGTAC+TGG + chr2_1:9859891-9859910 Msa0194000:intron 15.0%
!!! CAACATTTTTTATATCAATT+AGG - chr2_1:9859960-9859979 None:intergenic 15.0%
!! AACAATGTAAATATATCAAC+TGG + chr2_1:9855335-9855354 Msa0194000:CDS 20.0%
!! ACAATGTAAATATATCAACT+GGG + chr2_1:9855336-9855355 Msa0194000:CDS 20.0%
!!! AAGCAAAAAAAACATTGTTT+TGG + chr2_1:9855802-9855821 Msa0194000:intron 20.0%
!!! AATTTTACTTTGAATATGGA+TGG + chr2_1:9856097-9856116 Msa0194000:intron 20.0%
!!! GTTTTCTGATAAATGTAAAA+CGG + chr2_1:9856535-9856554 Msa0194000:intron 20.0%
!!! TGTTCTTAACTTATTTTATC+AGG + chr2_1:9856901-9856920 Msa0194000:intron 20.0%
!! TAGGGTGATAAATTATAATT+TGG + chr2_1:9857279-9857298 Msa0194000:intron 20.0%
!! ATATGATATGATGAAAAAGT+TGG + chr2_1:9857474-9857493 Msa0194000:intron 20.0%
!! ACTACTTAATAGTACTTAAT+TGG - chr2_1:9857597-9857616 None:intergenic 20.0%
!! TTTGGAAAGATATAAATGAT+AGG - chr2_1:9857673-9857692 None:intergenic 20.0%
!!! TTTTGTTTTTGTATTGTCAT+GGG + chr2_1:9858615-9858634 Msa0194000:intron 20.0%
!!! TTTTACATGAAGAAAAAATC+AGG - chr2_1:9858682-9858701 None:intergenic 20.0%
!! TTTATATATGTTGGAGTAAA+TGG - chr2_1:9858936-9858955 None:intergenic 20.0%
!! AATTAAAAGAATTGAGCAAA+AGG - chr2_1:9859069-9859088 None:intergenic 20.0%
!!! TACCAAAACCTTTAAATTTT+TGG - chr2_1:9859473-9859492 None:intergenic 20.0%
!!! CTATAAATTATCTTCTAAAG+TGG - chr2_1:9859608-9859627 None:intergenic 20.0%
!!! TGATTATTTTCTTTTCTTTC+TGG + chr2_1:9859634-9859653 Msa0194000:intron 20.0%
!!! TGAATGATTTAGCTTTTCTT+AGG - chr2_1:9855022-9855041 None:intergenic 25.0%
!!! ATGTTTGTGTCTTTTTTTGT+TGG + chr2_1:9855593-9855612 Msa0194000:CDS 25.0%
!!! GTTTTGTTTTGTATTGTCAT+GGG + chr2_1:9855712-9855731 Msa0194000:intron 25.0%
!! GCTTTTACATGAATAAAATC+AGG - chr2_1:9855786-9855805 None:intergenic 25.0%
! AATCTTGTTAGAAAGTAAAC+TGG - chr2_1:9856060-9856079 None:intergenic 25.0%
!!! TTCTCTCTAAGACAAATAAA+AGG - chr2_1:9856150-9856169 None:intergenic 25.0%
! TATTTGTCTTAGAGAGAAAA+TGG + chr2_1:9856152-9856171 Msa0194000:intron 25.0%
! AAACATTAGAGAAGACATAA+TGG - chr2_1:9856282-9856301 None:intergenic 25.0%
!! TACATTCTGATTTTTCACAA+TGG + chr2_1:9856579-9856598 Msa0194000:intron 25.0%
!! ACATTCTGATTTTTCACAAT+GGG + chr2_1:9856580-9856599 Msa0194000:intron 25.0%
! AAGTATGTCCCAAAATTAAA+TGG + chr2_1:9856668-9856687 Msa0194000:intron 25.0%
!!! GGTAAACTCCATTTAATTTT+GGG - chr2_1:9856679-9856698 None:intergenic 25.0%
!!! TGGTAAACTCCATTTAATTT+TGG - chr2_1:9856680-9856699 None:intergenic 25.0%
!!! TGTTCTAAAGTTACTTTTTG+CGG + chr2_1:9856820-9856839 Msa0194000:intron 25.0%
!!! CTTAACTTATTTTATCAGGT+CGG + chr2_1:9856905-9856924 Msa0194000:intron 25.0%
!! AAGAAAATAGTATTGAAGAG+AGG - chr2_1:9857123-9857142 None:intergenic 25.0%
! TAGTTTAGGTAGAAAGAAAA+GGG - chr2_1:9857507-9857526 None:intergenic 25.0%
! TTAGTTTAGGTAGAAAGAAA+AGG - chr2_1:9857508-9857527 None:intergenic 25.0%
!!! CTAGTTAGTTTATCTGTTTT+TGG - chr2_1:9857691-9857710 None:intergenic 25.0%
! AGATATGAACAGTTAATACT+AGG - chr2_1:9857744-9857763 None:intergenic 25.0%
!!! TGAATGATTTAGCTTTTCTT+AGG - chr2_1:9855022-9855041 None:intergenic 25.0%
! AACAATGTGAATATATCAAC+TGG + chr2_1:9858246-9858265 Msa0194000:CDS 25.0%
! ACAATGTGAATATATCAACT+GGG + chr2_1:9858247-9858266 Msa0194000:CDS 25.0%
! TGCTATATATCATGTTGATA+AGG + chr2_1:9858317-9858336 Msa0194000:intron 25.0%
!!! GTTTTGTTTTTGTATTGTCA+TGG + chr2_1:9858614-9858633 Msa0194000:intron 25.0%
!! TCATGTAAAAACAAAAGCAT+TGG + chr2_1:9858692-9858711 Msa0194000:intron 25.0%
! TTATACGTTAATCAACACTA+AGG + chr2_1:9858890-9858909 Msa0194000:intron 25.0%
!! CTTTAACTCAAAACTCATTT+TGG + chr2_1:9858983-9859002 Msa0194000:intron 25.0%
! GTATAACATTGAGAAGATAA+AGG - chr2_1:9859038-9859057 None:intergenic 25.0%
! CATGCTTATGAATACAAATT+AGG - chr2_1:9859167-9859186 None:intergenic 25.0%
! TTAGAAATTAACCCAAAAAG+TGG - chr2_1:9859236-9859255 None:intergenic 25.0%
! TACTTGATATGTGATTTGAT+TGG + chr2_1:9859273-9859292 Msa0194000:intron 25.0%
!! ATGAAAAAGTTTTACACTCT+AGG + chr2_1:9859296-9859315 Msa0194000:intron 25.0%
! AGTCTTCACCAAAAATTTAA+AGG + chr2_1:9859462-9859481 Msa0194000:intron 25.0%
!! CACCAAAAATTTAAAGGTTT+TGG + chr2_1:9859468-9859487 Msa0194000:intron 25.0%
! ACAATCAATTATTTGATGCA+AGG - chr2_1:9859724-9859743 None:intergenic 25.0%
! TTATATGATTAAAGGAATGC+AGG - chr2_1:9859802-9859821 None:intergenic 25.0%
!! TTGAATGTTGATTAGTGTTT+AGG - chr2_1:9860119-9860138 None:intergenic 25.0%
!!! TTTTTGCTTTTTTGAGGATT+TGG - chr2_1:9860373-9860392 None:intergenic 25.0%
!!! AGAATCTTTTTGCTTTTTTG+AGG - chr2_1:9860379-9860398 None:intergenic 25.0%
!! AATTTGGTTGATGATTTGTG+TGG - chr2_1:9855069-9855088 None:intergenic 30.0%
CATTCATATGATAACCAGAA+GGG - chr2_1:9855301-9855320 None:intergenic 30.0%
ACATTCATATGATAACCAGA+AGG - chr2_1:9855302-9855321 None:intergenic 30.0%
TGCTATATACCATGTTGATA+AGG + chr2_1:9855406-9855425 Msa0194000:intron 30.0%
!!! GGTTTTGTTTTGTATTGTCA+TGG + chr2_1:9855711-9855730 Msa0194000:intron 30.0%
TAGAATAGACCTTATAGTGA+AGG + chr2_1:9855891-9855910 Msa0194000:intron 30.0%
GTAGACTGCTTATATAGATA+AGG - chr2_1:9856393-9856412 None:intergenic 30.0%
TCTGATAAATGTAAAACGGT+TGG + chr2_1:9856539-9856558 Msa0194000:intron 30.0%
GTGAAAAATCAGAATGTAGA+TGG - chr2_1:9856577-9856596 None:intergenic 30.0%
GAAACTAAGAAGAGAGAAAT+AGG + chr2_1:9856762-9856781 Msa0194000:intron 30.0%
GAATGTTCTTAAAGCTTATG+AGG - chr2_1:9856857-9856876 None:intergenic 30.0%
! TCGCAATTGAAGTATTTCTT+TGG + chr2_1:9856930-9856949 Msa0194000:intron 30.0%
!!! GTCATGATTTTTTTCTGCAT+TGG - chr2_1:9857015-9857034 None:intergenic 30.0%
!!! AATTTTAGAATCCTGCATTG+TGG + chr2_1:9857056-9857075 Msa0194000:intron 30.0%
TCTTAACTACTTACTGATCT+AGG + chr2_1:9857139-9857158 Msa0194000:intron 30.0%
GGTATAATGAACATAGTTTG+TGG + chr2_1:9857160-9857179 Msa0194000:intron 30.0%
TAACATCTAATCTGAGAGTA+TGG + chr2_1:9857184-9857203 Msa0194000:intron 30.0%
ATGAACTATGAAGCAAACAT+TGG - chr2_1:9857221-9857240 None:intergenic 30.0%
TTTGTCAGACAATGTCAATT+AGG + chr2_1:9857260-9857279 Msa0194000:intron 30.0%
TTGTCAGACAATGTCAATTA+GGG + chr2_1:9857261-9857280 Msa0194000:intron 30.0%
ATCTGTCTAGGTATAAGAAA+AGG - chr2_1:9857311-9857330 None:intergenic 30.0%
TATGAAAATGTGGTTGGAAA+AGG - chr2_1:9857342-9857361 None:intergenic 30.0%
ATGTGTGTGATATGAAAATG+TGG - chr2_1:9857352-9857371 None:intergenic 30.0%
AGTTTAGGTAGAAAGAAAAG+GGG - chr2_1:9857506-9857525 None:intergenic 30.0%
! ATTGATGCAAGGTTTAGTTT+AGG - chr2_1:9857521-9857540 None:intergenic 30.0%
!!! GAATGGTTTGCTTTTTATTG+AGG - chr2_1:9857550-9857569 None:intergenic 30.0%
!! AATTTGGTTGATGATTTGTG+TGG - chr2_1:9855069-9855088 None:intergenic 30.0%
CATTCATATGATAACCAGAA+GGG - chr2_1:9855301-9855320 None:intergenic 30.0%
ACATTCATATGATAACCAGA+AGG - chr2_1:9855302-9855321 None:intergenic 30.0%
GACAATACAAAAACAAAACC+AGG - chr2_1:9858613-9858632 None:intergenic 30.0%
!!! AACAAAAGCATTGGTTGTTT+TGG + chr2_1:9858701-9858720 Msa0194000:intron 30.0%
!! TTATATTGGCTTCTAGTAAC+TGG + chr2_1:9858765-9858784 Msa0194000:intron 30.0%
! AGATCAAATCTAAAACCTTG+CGG + chr2_1:9858843-9858862 Msa0194000:intron 30.0%
TAGCCGTTAACTATATTATG+TGG + chr2_1:9859100-9859119 Msa0194000:intron 30.0%
GTGCCACATAATATAGTTAA+CGG - chr2_1:9859106-9859125 None:intergenic 30.0%
TTATAGAATTCAAGTGTGAG+TGG - chr2_1:9859557-9859576 None:intergenic 30.0%
!!! TTTCTTTTCTTTCTGGTTGA+TGG + chr2_1:9859641-9859660 Msa0194000:intron 30.0%
! ATGAAAGTATGGTTGGAAAA+GGG - chr2_1:9859697-9859716 None:intergenic 30.0%
! TATGAAAGTATGGTTGGAAA+AGG - chr2_1:9859698-9859717 None:intergenic 30.0%
! AGGATATATGAAAGTATGGT+TGG - chr2_1:9859704-9859723 None:intergenic 30.0%
TGCAAGGATATATGAAAGTA+TGG - chr2_1:9859708-9859727 None:intergenic 30.0%
GTAGCAAATAATAACTGTCA+GGG - chr2_1:9859938-9859957 None:intergenic 30.0%
! GTGAAAGGTTTAGTTTAGTT+AGG - chr2_1:9860000-9860019 None:intergenic 30.0%
! CTTTTATTGAGGATTCTCAT+TGG - chr2_1:9860022-9860041 None:intergenic 30.0%
TTTATTTGTGTCCTTATGTG+AGG - chr2_1:9860065-9860084 None:intergenic 30.0%
AATTAGTAGCTGTAGAATTG+AGG - chr2_1:9860183-9860202 None:intergenic 30.0%
!!! TGATTTTGGGATAATACTAG+GGG - chr2_1:9860333-9860352 None:intergenic 30.0%
!!! GTGATTTTGGGATAATACTA+GGG - chr2_1:9860334-9860353 None:intergenic 30.0%
ATTTGGATAATGTCTATGGA+TGG - chr2_1:9860356-9860375 None:intergenic 30.0%
! TAACTATTTGTGAGTTGAGT+TGG - chr2_1:9860442-9860461 None:intergenic 30.0%
! TACATTAAGTTGTAACCGTT+TGG - chr2_1:9860681-9860700 None:intergenic 30.0%
!!! GATTTTGATGATGTCTTGAC+CGG - chr2_1:9855000-9855019 None:intergenic 35.0%
!!! TTTGTGTGGTTTTGAGCAAA+CGG - chr2_1:9855055-9855074 None:intergenic 35.0%
ACTGTATCAGTTCTTTCTGT+TGG - chr2_1:9855199-9855218 None:intergenic 35.0%
CATATGAATGTGACTGCTTA+TGG + chr2_1:9855311-9855330 Msa0194000:CDS 35.0%
AAGGATAGTTCATCTGAAGA+TGG + chr2_1:9855506-9855525 Msa0194000:CDS 35.0%
TTGACGGTTAATCAAATTGG+TGG - chr2_1:9855567-9855586 None:intergenic 35.0%
ACCAATTTGATTAACCGTCA+AGG + chr2_1:9855566-9855585 Msa0194000:CDS 35.0%
TCCTTGACGGTTAATCAAAT+TGG - chr2_1:9855570-9855589 None:intergenic 35.0%
ACACAAACATTGTTCCTTGA+CGG - chr2_1:9855583-9855602 None:intergenic 35.0%
!! ATGTGTTGGTCTTCATCAAA+TGG - chr2_1:9855642-9855661 None:intergenic 35.0%
ATGAAGACCAACACATTTGA+AGG + chr2_1:9855646-9855665 Msa0194000:intron 35.0%
ATAACAGCCTTCAAATGTGT+TGG - chr2_1:9855656-9855675 None:intergenic 35.0%
TTCTTGTGCTCTTTCTTTCT+TGG + chr2_1:9855690-9855709 Msa0194000:intron 35.0%
! TGTTTTGTATTGTCATGGGA+TGG + chr2_1:9855716-9855735 Msa0194000:intron 35.0%
! GTTTTGTATTGTCATGGGAT+GGG + chr2_1:9855717-9855736 Msa0194000:intron 35.0%
AGAGATAGTCCTTCACTATA+AGG - chr2_1:9855903-9855922 None:intergenic 35.0%
ATAGTGAAGGACTATCTCTT+TGG + chr2_1:9855904-9855923 Msa0194000:intron 35.0%
TTACTTTGAATATGGATGGC+TGG + chr2_1:9856101-9856120 Msa0194000:intron 35.0%
GACTGCTTATATAGATAAGG+CGG - chr2_1:9856390-9856409 None:intergenic 35.0%
TTATGAACGAATTAGCTCCT+TGG + chr2_1:9856417-9856436 Msa0194000:intron 35.0%
GAGTCAAAGTATGCAATCAA+TGG - chr2_1:9856700-9856719 None:intergenic 35.0%
GATTGCATACTTTGACTCTA+CGG + chr2_1:9856702-9856721 Msa0194000:intron 35.0%
GTGACATTACAACAATGTGT+CGG - chr2_1:9856986-9857005 None:intergenic 35.0%
! CTAATCTGAGAGTATGGTAT+TGG + chr2_1:9857190-9857209 Msa0194000:intron 35.0%
!! CTGACAAAGATTTGGTGATA+TGG - chr2_1:9857248-9857267 None:intergenic 35.0%
GACATTGTCTGACAAAGATT+TGG - chr2_1:9857256-9857275 None:intergenic 35.0%
GTGTGATATGAAAATGTGGT+TGG - chr2_1:9857348-9857367 None:intergenic 35.0%
!! TTAATTGGTGACCTTTTGTG+AGG - chr2_1:9857582-9857601 None:intergenic 35.0%
TAATGAAGGGACTAATGGTT+TGG - chr2_1:9857860-9857879 None:intergenic 35.0%
TCACTAGCTGTGAGTTAATT+TGG - chr2_1:9857996-9858015 None:intergenic 35.0%
CAGCTAGTGACAACAAAAAA+TGG + chr2_1:9858006-9858025 Msa0194000:CDS 35.0%
CTAGTGACAACAAAAAATGG+TGG + chr2_1:9858009-9858028 Msa0194000:CDS 35.0%
ACTGTATCAGTTCTTTCTGT+TGG - chr2_1:9855199-9855218 None:intergenic 35.0%
CATATGAATGTGACTGCTTA+TGG + chr2_1:9855311-9855330 Msa0194000:CDS 35.0%
! TGATAAGGTGCTTATTCCTT+TGG + chr2_1:9858332-9858351 Msa0194000:intron 35.0%
TTAGGCTTAGAGAAATCCAA+AGG - chr2_1:9858351-9858370 None:intergenic 35.0%
TTTGGATTTCTCTAAGCCTA+AGG + chr2_1:9858350-9858369 Msa0194000:CDS 35.0%
GAACTATCCTTATCAGCTTT+AGG - chr2_1:9858408-9858427 None:intergenic 35.0%
AAGGATAGTTCATCTGAAGA+TGG + chr2_1:9855506-9855525 Msa0194000:CDS 35.0%
ACACAAGTAATGTGCTTTGA+AGG - chr2_1:9858494-9858513 None:intergenic 35.0%
ATGAAGACCAACACATTTGA+AGG + chr2_1:9855646-9855665 Msa0194000:intron 35.0%
ATAACAGCCTTCAAATGTGT+TGG - chr2_1:9855656-9855675 None:intergenic 35.0%
TATTGTGTTCTTTACTCTCC+TGG + chr2_1:9858592-9858611 Msa0194000:intron 35.0%
TGGGAGGGTCTTAAAATTAT+CGG + chr2_1:9858820-9858839 Msa0194000:intron 35.0%
GCGTCATTGTATGATTTGAT+TGG - chr2_1:9859214-9859233 None:intergenic 35.0%
!!! ATACAATGACGCCACTTTTT+GGG + chr2_1:9859222-9859241 Msa0194000:intron 35.0%
! TGAAAGTATGGTTGGAAAAG+GGG - chr2_1:9859696-9859715 None:intergenic 35.0%
GGTAGCAAATAATAACTGTC+AGG - chr2_1:9859939-9859958 None:intergenic 35.0%
!!! GGTGATTTTGGGATAATACT+AGG - chr2_1:9860335-9860354 None:intergenic 35.0%
! TGTCTATGGATGGTGATTTT+GGG - chr2_1:9860346-9860365 None:intergenic 35.0%
! ATGTCTATGGATGGTGATTT+TGG - chr2_1:9860347-9860366 None:intergenic 35.0%
GAGGATTTGGATAATGTCTA+TGG - chr2_1:9860360-9860379 None:intergenic 35.0%
!!! ACTGAGTTGTTTTGAGAAGA+CGG - chr2_1:9860412-9860431 None:intergenic 35.0%
!!! ACCTGGTTTGAGTTTTGAAA+AGG - chr2_1:9860531-9860550 None:intergenic 35.0%
CAACTTAATGTAACCACTTC+TGG + chr2_1:9860689-9860708 Msa0194000:CDS 35.0%
TGTGTAAACTGTTCCTGTAA+CGG - chr2_1:9860756-9860775 None:intergenic 35.0%
CAACAAACTAGCTGTATATC+AGG + chr2_1:9860778-9860797 Msa0194000:CDS 35.0%
! GATGAATCTCCTTTAGAAAC+CGG - chr2_1:9860869-9860888 None:intergenic 35.0%
AAGCAAGTCATCATCATCAA+AGG + chr2_1:9860904-9860923 Msa0194000:CDS 35.0%
! TGCTGGTTATTCAAACATGA+AGG + chr2_1:9860970-9860989 Msa0194000:CDS 35.0%
GCTGGTTATTCAAACATGAA+GGG + chr2_1:9860971-9860990 Msa0194000:CDS 35.0%
ATTCAAACATGAAGGGAATG+TGG + chr2_1:9860978-9860997 Msa0194000:CDS 35.0%
CAACCAAATTAACTCACAGC+TGG + chr2_1:9855079-9855098 Msa0194000:CDS 40.0%
TCACCAGCTGTGAGTTAATT+TGG - chr2_1:9855085-9855104 None:intergenic 40.0%
CAGCTGGTGACAACAAAAAA+CGG + chr2_1:9855095-9855114 Msa0194000:CDS 40.0%
!! TTTTGATTCGCTTAGCAACC+CGG + chr2_1:9855253-9855272 Msa0194000:CDS 40.0%
GGATAAGCACCTTATCAACA+TGG - chr2_1:9855418-9855437 None:intergenic 40.0%
! TGATAAGGTGCTTATCCCTT+TGG + chr2_1:9855421-9855440 Msa0194000:intron 40.0%
TAGGCTTAGAGAAGTCCAAA+GGG - chr2_1:9855439-9855458 None:intergenic 40.0%
TTAGGCTTAGAGAAGTCCAA+AGG - chr2_1:9855440-9855459 None:intergenic 40.0%
TTTGGACTTCTCTAAGCCTA+AGG + chr2_1:9855439-9855458 Msa0194000:CDS 40.0%
GAACTATCCTTAGCAGCTTT+AGG - chr2_1:9855497-9855516 None:intergenic 40.0%
TTCATCTGAAGATGGTGATC+AGG + chr2_1:9855514-9855533 Msa0194000:CDS 40.0%
TCATCTGAAGATGGTGATCA+GGG + chr2_1:9855515-9855534 Msa0194000:CDS 40.0%
GAGACAACTAAAGCTACTTC+TGG + chr2_1:9855539-9855558 Msa0194000:CDS 40.0%
TCAATAGTTGATCCTCAAGC+TGG + chr2_1:9855942-9855961 Msa0194000:intron 40.0%
AAAAAATGTCTGCCAGCTTG+AGG - chr2_1:9855957-9855976 None:intergenic 40.0%
GCACGAACTAGTTATAGAGA+AGG - chr2_1:9855998-9856017 None:intergenic 40.0%
GTTCGTGCTTAATTGTGCAA+TGG + chr2_1:9856010-9856029 Msa0194000:intron 40.0%
TGTGCTATAATGTTGAGCCA+AGG + chr2_1:9856359-9856378 Msa0194000:intron 40.0%
TGCTTCTTTCCTCTGCTATA+CGG - chr2_1:9856613-9856632 None:intergenic 40.0%
TCCTTTGTGGATCAGTTCTT+AGG - chr2_1:9856956-9856975 None:intergenic 40.0%
TATAAGAGCAACCACAATGC+AGG - chr2_1:9857070-9857089 None:intergenic 40.0%
!! TCTGAGAGTATGGTATTGGT+AGG + chr2_1:9857194-9857213 Msa0194000:intron 40.0%
AAGGAGCTATTGATCTGTCT+AGG - chr2_1:9857323-9857342 None:intergenic 40.0%
TGACAGTAGAGATTTGACAG+TGG - chr2_1:9857437-9857456 None:intergenic 40.0%
TGAGGATGCTAATTGATGCA+AGG - chr2_1:9857532-9857551 None:intergenic 40.0%
! TGACCTTTTGTGAGGAATGA+GGG - chr2_1:9857574-9857593 None:intergenic 40.0%
GAGTGTTTGATGTGTAGTGT+AGG - chr2_1:9857633-9857652 None:intergenic 40.0%
TGAGGTAATGAAGGGACTAA+TGG - chr2_1:9857865-9857884 None:intergenic 40.0%
AGGGTGATTGAGGTAATGAA+GGG - chr2_1:9857873-9857892 None:intergenic 40.0%
!!! TTTGTGTGGTTTTGAGCAAG+CGG - chr2_1:9857966-9857985 None:intergenic 40.0%
CTGTTAATGCTACACTCACA+GGG + chr2_1:9858271-9858290 Msa0194000:CDS 40.0%
TCATCTGAAGATGGTGATCA+AGG + chr2_1:9855515-9855534 Msa0194000:CDS 40.0%
GAGACAACTAAAGCTACTTC+TGG + chr2_1:9855539-9855558 Msa0194000:CDS 40.0%
TGGTCTTCATCAACTGAACA+TGG - chr2_1:9858538-9858557 None:intergenic 40.0%
!!! GCATTGGTTGTTTTGGTGAA+AGG + chr2_1:9858708-9858727 Msa0194000:intron 40.0%
CTCATATATCAAATGCCGCA+AGG - chr2_1:9858861-9858880 None:intergenic 40.0%
TGAAGAAGAAGACGAAGACA+TGG - chr2_1:9859139-9859158 None:intergenic 40.0%
!!! CATACAATGACGCCACTTTT+TGG + chr2_1:9859221-9859240 Msa0194000:intron 40.0%
!! GGGGTATTGATCTGTATAGA+GGG - chr2_1:9859676-9859695 None:intergenic 40.0%
! GAAAGTATGGTTGGAAAAGG+GGG - chr2_1:9859695-9859714 None:intergenic 40.0%
GGACATAAGAAAGGTAAGCT+AGG - chr2_1:9859917-9859936 None:intergenic 40.0%
AACTGTCAGGGACATAAGAA+AGG - chr2_1:9859926-9859945 None:intergenic 40.0%
TGAGGATTCTCATTGGTGAA+AGG - chr2_1:9860015-9860034 None:intergenic 40.0%
!!! GAAGGGATTGGCTTTTATTG+AGG - chr2_1:9860033-9860052 None:intergenic 40.0%
TGTCCTTATGTGAGGAATGA+GGG - chr2_1:9860057-9860076 None:intergenic 40.0%
! TTTGGGATAATACTAGGGGT+GGG - chr2_1:9860329-9860348 None:intergenic 40.0%
!!! TTTTGGGATAATACTAGGGG+TGG - chr2_1:9860330-9860349 None:intergenic 40.0%
TCATCATCAGATTCTAGCAG+TGG + chr2_1:9860473-9860492 Msa0194000:CDS 40.0%
!! TTTGAAAAGGCACTGTCTTC+TGG - chr2_1:9860518-9860537 None:intergenic 40.0%
! GCCTTTTCAAAACTCAAACC+AGG + chr2_1:9860527-9860546 Msa0194000:CDS 40.0%
TACTTTGTGTCTGTCACTGA+GGG - chr2_1:9860564-9860583 None:intergenic 40.0%
! AGATGAATGAGGAAAGTGTG+TGG - chr2_1:9860601-9860620 None:intergenic 40.0%
GTTCGAGATTGAGATGAATG+AGG - chr2_1:9860612-9860631 None:intergenic 40.0%
CTTAATGTAACCACTTCTGG+TGG + chr2_1:9860692-9860711 Msa0194000:CDS 40.0%
AGCCATGTTAGTATGACAAC+TGG + chr2_1:9860716-9860735 Msa0194000:CDS 40.0%
!! AGCTGTATATCAGGTTGACA+AGG + chr2_1:9860787-9860806 Msa0194000:CDS 40.0%
!! GATGACTTGCTTCTATCATC+AGG - chr2_1:9860896-9860915 None:intergenic 40.0%
TGAGGTAATGAGGGGACTAA+TGG - chr2_1:9854954-9854973 None:intergenic 45.0%
AGGGTGATTGAGGTAATGAG+GGG - chr2_1:9854962-9854981 None:intergenic 45.0%
GAGGGTGATTGAGGTAATGA+GGG - chr2_1:9854963-9854982 None:intergenic 45.0%
TGAGGGTGATTGAGGTAATG+AGG - chr2_1:9854964-9854983 None:intergenic 45.0%
GTCTTGACCGGAAGATGAAT+CGG - chr2_1:9854988-9855007 None:intergenic 45.0%
CTGGTGACAACAAAAAACGG+TGG + chr2_1:9855098-9855117 Msa0194000:CDS 45.0%
TTTGAGCTCGAGACGTAAAC+AGG - chr2_1:9855233-9855252 None:intergenic 45.0%
ATAACCAGAAGGGCTATCAC+TGG - chr2_1:9855291-9855310 None:intergenic 45.0%
CTGTCAATGCTACACTCACA+GGG + chr2_1:9855360-9855379 Msa0194000:CDS 45.0%
!! AAAGGCACCTAAAGCTGCTA+AGG + chr2_1:9855487-9855506 Msa0194000:CDS 45.0%
TGTATTGTCATGGGATGGGA+TGG + chr2_1:9855721-9855740 Msa0194000:intron 45.0%
GTATTGTCATGGGATGGGAT+GGG + chr2_1:9855722-9855741 Msa0194000:intron 45.0%
GTGAAGGACTATCTCTTTGG+AGG + chr2_1:9855907-9855926 Msa0194000:intron 45.0%
ACGAATTAGCTCCTTGGTGA+TGG + chr2_1:9856423-9856442 Msa0194000:intron 45.0%
CATAGATCGATCCATCACCA+AGG - chr2_1:9856437-9856456 None:intergenic 45.0%
TACGGAACAATGCGTCCTTT+AGG + chr2_1:9856720-9856739 Msa0194000:intron 45.0%
ACGGAACAATGCGTCCTTTA+GGG + chr2_1:9856721-9856740 Msa0194000:intron 45.0%
CACAACCAAACACACCCTAA+AGG - chr2_1:9856738-9856757 None:intergenic 45.0%
GCCTAAGAACTGATCCACAA+AGG + chr2_1:9856952-9856971 Msa0194000:intron 45.0%
TGTCGGAAGAGTTTCCTTTG+TGG - chr2_1:9856969-9856988 None:intergenic 45.0%
TTGTGAGGAATGAGGGAGAA+TGG - chr2_1:9857567-9857586 None:intergenic 45.0%
TCTCCCTCATTCCTCACAAA+AGG + chr2_1:9857568-9857587 Msa0194000:intron 45.0%
! GTGACCTTTTGTGAGGAATG+AGG - chr2_1:9857575-9857594 None:intergenic 45.0%
AGGTGATTGAGCTGAAGTAG+TGG - chr2_1:9857773-9857792 None:intergenic 45.0%
!! GAAGGGACTAATGGTTTGGT+TGG - chr2_1:9857856-9857875 None:intergenic 45.0%
GAGGGTGATTGAGGTAATGA+AGG - chr2_1:9854963-9854982 None:intergenic 45.0%
GAATCAGATGAGGGTGATTG+AGG - chr2_1:9857883-9857902 None:intergenic 45.0%
CCTGACGAAGAATCAGATGA+GGG - chr2_1:9857892-9857911 None:intergenic 45.0%
ACCTGACGAAGAATCAGATG+AGG - chr2_1:9857893-9857912 None:intergenic 45.0%
!! GAAGTATCCGGCTTTGAGTT+GGG - chr2_1:9858070-9858089 None:intergenic 45.0%
!! TGAAGTATCCGGCTTTGAGT+TGG - chr2_1:9858071-9858090 None:intergenic 45.0%
TTTGAGCTCGAGACGTAAAC+AGG - chr2_1:9855233-9855252 None:intergenic 45.0%
ATAACCAGAAGGGCTATCAC+TGG - chr2_1:9855291-9855310 None:intergenic 45.0%
CCTGTGAGTGTAGCATTAAC+AGG - chr2_1:9858273-9858292 None:intergenic 45.0%
CCTGTTAATGCTACACTCAC+AGG + chr2_1:9858270-9858289 Msa0194000:CDS 45.0%
GGTTGCTGCAGCAACAAAAA+GGG - chr2_1:9858517-9858536 None:intergenic 45.0%
TGGTTGCTGCAGCAACAAAA+AGG - chr2_1:9858518-9858537 None:intergenic 45.0%
!! GGGGGTATTGATCTGTATAG+AGG - chr2_1:9859677-9859696 None:intergenic 45.0%
ATGTGAGGAATGAGGGAGAA+GGG - chr2_1:9860050-9860069 None:intergenic 45.0%
TATGTGAGGAATGAGGGAGA+AGG - chr2_1:9860051-9860070 None:intergenic 45.0%
TCTCCCTCATTCCTCACATA+AGG + chr2_1:9860051-9860070 Msa0194000:intron 45.0%
GTGTCCTTATGTGAGGAATG+AGG - chr2_1:9860058-9860077 None:intergenic 45.0%
!! AGGTGGTAGTGGAATAGTAG+AGG - chr2_1:9860211-9860230 None:intergenic 45.0%
TCACCAGTTCAATCTCCACA+AGG + chr2_1:9860242-9860261 Msa0194000:CDS 45.0%
ACTTGGGGATACTGGTACAA+GGG - chr2_1:9860300-9860319 None:intergenic 45.0%
TTGTACCAGTATCCCCAAGT+GGG + chr2_1:9860300-9860319 Msa0194000:CDS 45.0%
TTGGGATAATACTAGGGGTG+GGG - chr2_1:9860328-9860347 None:intergenic 45.0%
TCATCAGATTCTAGCAGTGG+TGG + chr2_1:9860476-9860495 Msa0194000:CDS 45.0%
CTGAGGGAATTAAGGAAACC+TGG - chr2_1:9860548-9860567 None:intergenic 45.0%
GTCTGTCACTGAGGGAATTA+AGG - chr2_1:9860556-9860575 None:intergenic 45.0%
CTACTTTGTGTCTGTCACTG+AGG - chr2_1:9860565-9860584 None:intergenic 45.0%
!! TGTTTGAACCGGGTTGGTTA+AGG - chr2_1:9860642-9860661 None:intergenic 45.0%
TCACCAGCTTGTGTTTGAAC+CGG - chr2_1:9860653-9860672 None:intergenic 45.0%
! AAGCTGGTGATGATGCCAAA+CGG + chr2_1:9860663-9860682 Msa0194000:CDS 45.0%
CGCCAGTTGTCATACTAACA+TGG - chr2_1:9860721-9860740 None:intergenic 45.0%
AAACATGAAGGGAATGTGGC+TGG + chr2_1:9860982-9861001 Msa0194000:CDS 45.0%
!!! ATGTGGCTGGCTCTTGTTTT+TGG + chr2_1:9860995-9861014 Msa0194000:CDS 45.0%
!!! TGTGGCTGGCTCTTGTTTTT+GGG + chr2_1:9860996-9861015 Msa0194000:CDS 45.0%
!! TTTGGGATGGTTTTGCTTGC+TGG + chr2_1:9861013-9861032 Msa0194000:CDS 45.0%
!! TAATAATATTATATGATTAA+AGG - chr2_1:9859810-9859829 None:intergenic 5.0%
AGCAGGTGATTGAGCTGTAG+TGG - chr2_1:9854865-9854884 None:intergenic 50.0%
!! GAGGGGACTAATGGTTTTGC+CGG - chr2_1:9854945-9854964 None:intergenic 50.0%
GAATCGGATGAGGGTGATTG+AGG - chr2_1:9854972-9854991 None:intergenic 50.0%
CCGGAAGATGAATCGGATGA+GGG - chr2_1:9854981-9855000 None:intergenic 50.0%
CCCTCATCCGATTCATCTTC+CGG + chr2_1:9854978-9854997 Msa0194000:CDS 50.0%
ACCGGAAGATGAATCGGATG+AGG - chr2_1:9854982-9855001 None:intergenic 50.0%
!! TGCGAAAAGGCACCATCATC+AGG - chr2_1:9855140-9855159 None:intergenic 50.0%
GCCGGATACTTCAATTCCCT+CGG + chr2_1:9855167-9855186 Msa0194000:CDS 50.0%
! GCCGAGGGAATTGAAGTATC+CGG - chr2_1:9855171-9855190 None:intergenic 50.0%
AGAAGGGCTATCACTGGCAA+GGG - chr2_1:9855285-9855304 None:intergenic 50.0%
!! CCTGTGAGTGTAGCATTGAC+AGG - chr2_1:9855362-9855381 None:intergenic 50.0%
CCTGTCAATGCTACACTCAC+AGG + chr2_1:9855359-9855378 Msa0194000:CDS 50.0%
! TCTAGCTCCTGCTCCTTCTA+CGG + chr2_1:9855463-9855482 Msa0194000:CDS 50.0%
TTAGGTGCCTTTGCCGTAGA+AGG - chr2_1:9855479-9855498 None:intergenic 50.0%
TGGATGGCTGGAATGACATC+TGG + chr2_1:9856113-9856132 Msa0194000:intron 50.0%
!! TGCGTCCTTTAGGGTGTGTT+TGG + chr2_1:9856730-9856749 Msa0194000:intron 50.0%
CCCTCATCTGATTCTTCGTC+AGG + chr2_1:9857889-9857908 Msa0194000:intron 50.0%
ACCATCCTTGCACCTGATGA+TGG + chr2_1:9858036-9858055 Msa0194000:CDS 50.0%
ACCATCATCAGGTGCAAGGA+TGG - chr2_1:9858040-9858059 None:intergenic 50.0%
!! TGGGAAAAGGCACCATCATC+AGG - chr2_1:9858051-9858070 None:intergenic 50.0%
! GCCTTTTCCCAACTCAAAGC+CGG + chr2_1:9858060-9858079 Msa0194000:CDS 50.0%
!! TCCGGCTTTGAGTTGGGAAA+AGG - chr2_1:9858064-9858083 None:intergenic 50.0%
! GCCAAGGGAGTTGAAGTATC+CGG - chr2_1:9858082-9858101 None:intergenic 50.0%
TTTCTGTTGGCGTTCGCCAA+GGG - chr2_1:9858097-9858116 None:intergenic 50.0%
!! GAAGGCGCCTAAAGCTGATA+AGG + chr2_1:9858398-9858417 Msa0194000:CDS 50.0%
AGGAATGAGGGAGAAGGGAT+TGG - chr2_1:9860045-9860064 None:intergenic 50.0%
AACTGGTGAGAGTTGTGCTG+AGG - chr2_1:9860231-9860250 None:intergenic 50.0%
! GAGCCTTGTGGAGATTGAAC+TGG - chr2_1:9860248-9860267 None:intergenic 50.0%
ACTGTGTTGAAACCTGGTGC+TGG - chr2_1:9860275-9860294 None:intergenic 50.0%
AGGGGAACTGTGTTGAAACC+TGG - chr2_1:9860281-9860300 None:intergenic 50.0%
CTTGGGGATACTGGTACAAG+GGG - chr2_1:9860299-9860318 None:intergenic 50.0%
CACTTGGGGATACTGGTACA+AGG - chr2_1:9860301-9860320 None:intergenic 50.0%
CTTGTACCAGTATCCCCAAG+TGG + chr2_1:9860299-9860318 Msa0194000:CDS 50.0%
TGTACCAGTATCCCCAAGTG+GGG + chr2_1:9860301-9860320 Msa0194000:CDS 50.0%
TGGGATAATACTAGGGGTGG+GGG - chr2_1:9860327-9860346 None:intergenic 50.0%
CTTCGACACCTTAACCAACC+CGG + chr2_1:9860631-9860650 Msa0194000:CDS 50.0%
AGCTTGTGTTTGAACCGGGT+TGG - chr2_1:9860648-9860667 None:intergenic 50.0%
AACCCGGTTCAAACACAAGC+TGG + chr2_1:9860647-9860666 Msa0194000:CDS 50.0%
CACCAGCTTGTGTTTGAACC+GGG - chr2_1:9860652-9860671 None:intergenic 50.0%
AACATGGCTACCACCAGAAG+TGG - chr2_1:9860705-9860724 None:intergenic 50.0%
GCTGTTAACGCAACCGTTAC+AGG + chr2_1:9860740-9860759 Msa0194000:CDS 50.0%
! GCAGGAAGCACAAGATCAAG+AGG - chr2_1:9860821-9860840 None:intergenic 50.0%
! TCTCCTTTAGAAACCGGTGC+AGG - chr2_1:9860863-9860882 None:intergenic 50.0%
!!! GCTGGCTCTTGTTTTTGGGA+TGG + chr2_1:9861000-9861019 Msa0194000:CDS 50.0%
! GCAGGTTTTGCTGCGGCTTT+AGG - chr2_1:9854894-9854913 None:intergenic 55.0%
ACCATCCTCGCACCTGATGA+TGG + chr2_1:9855125-9855144 Msa0194000:CDS 55.0%
ACCATCATCAGGTGCGAGGA+TGG - chr2_1:9855129-9855148 None:intergenic 55.0%
! GCCTTTTCGCAGCTCAAAGC+CGG + chr2_1:9855149-9855168 Msa0194000:CDS 55.0%
!! TCCGGCTTTGAGCTGCGAAA+AGG - chr2_1:9855153-9855172 None:intergenic 55.0%
TTTCTGTTGGCGTTCGCCGA+GGG - chr2_1:9855186-9855205 None:intergenic 55.0%
CAGAAGGGCTATCACTGGCA+AGG - chr2_1:9855286-9855305 None:intergenic 55.0%
CTTGCCAGTGATAGCCCTTC+TGG + chr2_1:9855284-9855303 Msa0194000:CDS 55.0%
TCCTGCTCCTTCTACGGCAA+AGG + chr2_1:9855469-9855488 Msa0194000:CDS 55.0%
TAGATAAGGCGGCGCATCCT+TGG - chr2_1:9856379-9856398 None:intergenic 55.0%
GGCTTGAGACCGTATAGCAG+AGG + chr2_1:9856601-9856620 Msa0194000:intron 55.0%
!! GGTTTGGTTGGTGCTGTTGC+AGG - chr2_1:9857844-9857863 None:intergenic 55.0%
AGGCACCATCATCAGGTGCA+AGG - chr2_1:9858044-9858063 None:intergenic 55.0%
GCCGGATACTTCAACTCCCT+TGG + chr2_1:9858078-9858097 Msa0194000:CDS 55.0%
CTTTCTGTTGGCGTTCGCCA+AGG - chr2_1:9858098-9858117 None:intergenic 55.0%
CTTGCCAGTGATAGCCCTTC+TGG + chr2_1:9855284-9855303 Msa0194000:CDS 55.0%
! TCTAGCTCCTGCTCCTGCTA+CGG + chr2_1:9858374-9858393 Msa0194000:CDS 55.0%
GAGTTGTGCTGAGGTGGTAG+TGG - chr2_1:9860222-9860241 None:intergenic 55.0%
TGGTGAGAGTTGTGCTGAGG+TGG - chr2_1:9860228-9860247 None:intergenic 55.0%
! GCAAGTGCAGGAGCTTTAGC+AGG - chr2_1:9860839-9860858 None:intergenic 55.0%
!! GCACCTGCACCGGTTTCTAA+AGG + chr2_1:9860857-9860876 Msa0194000:CDS 55.0%
GACTTGCCTGCAGAAGCTTC+TGG + chr2_1:9860947-9860966 Msa0194000:CDS 55.0%
!!! GGTTTTGCCGGTGCTGTTGC+TGG - chr2_1:9854933-9854952 None:intergenic 60.0%
AGGCACCATCATCAGGTGCG+AGG - chr2_1:9855133-9855152 None:intergenic 60.0%
CTTTCTGTTGGCGTTCGCCG+AGG - chr2_1:9855187-9855206 None:intergenic 60.0%
TCACTGGCAAGGGTCAGCAC+CGG - chr2_1:9855275-9855294 None:intergenic 60.0%
GGAGCAGGAGCTAGAGCCTT+AGG - chr2_1:9855458-9855477 None:intergenic 60.0%
GCCTTTGCCGTAGAAGGAGC+AGG - chr2_1:9855473-9855492 None:intergenic 60.0%
TGCTGCAGCACCTAAAGCCC+CGG + chr2_1:9857792-9857811 Msa0194000:intron 60.0%
TGTTGCAGGAGCTGGTGTGG+CGG - chr2_1:9857830-9857849 None:intergenic 60.0%
TGCTGTTGCAGGAGCTGGTG+TGG - chr2_1:9857833-9857852 None:intergenic 60.0%
!! GTTGGTGCTGTTGCAGGAGC+TGG - chr2_1:9857838-9857857 None:intergenic 60.0%
CACTGGCAAGCGTCAGCACA+GGG - chr2_1:9858185-9858204 None:intergenic 60.0%
TCACTGGCAAGCGTCAGCAC+AGG - chr2_1:9858186-9858205 None:intergenic 60.0%
GGAGCAGGAGCTAGAGCCTT+AGG - chr2_1:9855458-9855477 None:intergenic 60.0%
!! GGTGCTGGTGTAGAGCCTTG+TGG - chr2_1:9860260-9860279 None:intergenic 60.0%
CAAGGCTCTACACCAGCACC+AGG + chr2_1:9860260-9860279 Msa0194000:CDS 60.0%
TCCTGCACTTGCACCTGCAC+CGG + chr2_1:9860847-9860866 Msa0194000:CDS 60.0%
CCAGCACCAGAAGCTTCTGC+AGG - chr2_1:9860956-9860975 None:intergenic 60.0%
CCTGCAGAAGCTTCTGGTGC+TGG + chr2_1:9860953-9860972 Msa0194000:CDS 60.0%
!! GCGGCTTTAGGTGCTGCAGC+AGG - chr2_1:9854882-9854901 None:intergenic 65.0%
! GGCAGGGGCAGGTTTTGCTG+CGG - chr2_1:9854901-9854920 None:intergenic 65.0%
TTGCTGGAGCTGGCGTGGCA+GGG - chr2_1:9854917-9854936 None:intergenic 65.0%
TGCTGTTGCTGGAGCTGGCG+TGG - chr2_1:9854922-9854941 None:intergenic 65.0%
GCCAGCTCCAGCAACAGCAC+CGG + chr2_1:9854923-9854942 Msa0194000:CDS 65.0%
CACTGGCAAGGGTCAGCACC+GGG - chr2_1:9855274-9855293 None:intergenic 65.0%
!! GGGGCTTTAGGTGCTGCAGC+AGG - chr2_1:9857793-9857812 None:intergenic 65.0%
! GCGGGTTTTGCCGGGGCTTT+AGG - chr2_1:9857805-9857824 None:intergenic 65.0%
TTGCAGGAGCTGGTGTGGCG+GGG - chr2_1:9857828-9857847 None:intergenic 65.0%
GTTGCAGGAGCTGGTGTGGC+GGG - chr2_1:9857829-9857848 None:intergenic 65.0%
TCCTGCTCCTGCTACGGCGA+AGG + chr2_1:9858380-9858399 Msa0194000:CDS 65.0%
TTAGGCGCCTTCGCCGTAGC+AGG - chr2_1:9858390-9858409 None:intergenic 65.0%
ACCGGTGCAGGTGCAAGTGC+AGG - chr2_1:9860851-9860870 None:intergenic 65.0%
TGCTGGAGCTGGCGTGGCAG+GGG - chr2_1:9854916-9854935 None:intergenic 70.0%
GTTGCTGGAGCTGGCGTGGC+AGG - chr2_1:9854918-9854937 None:intergenic 70.0%
!! GCCGGTGCTGTTGCTGGAGC+TGG - chr2_1:9854927-9854946 None:intergenic 70.0%
TGCAGGAGCTGGTGTGGCGG+GGG - chr2_1:9857827-9857846 None:intergenic 70.0%
GCCTTCGCCGTAGCAGGAGC+AGG - chr2_1:9858384-9858403 None:intergenic 70.0%
GGGGCCCCACTTGGGGATAC+TGG - chr2_1:9860308-9860327 None:intergenic 70.0%
TAGGGGTGGGGGCCCCACTT+GGG - chr2_1:9860316-9860335 None:intergenic 70.0%
!! TGGCGGGGGCGGGTTTTGCC+GGG - chr2_1:9857813-9857832 None:intergenic 75.0%
!! GTGGCGGGGGCGGGTTTTGC+CGG - chr2_1:9857814-9857833 None:intergenic 75.0%
! AGGAGCTGGTGTGGCGGGGG+CGG - chr2_1:9857824-9857843 None:intergenic 75.0%
AGGGGTGGGGGCCCCACTTG+GGG - chr2_1:9860315-9860334 None:intergenic 75.0%
CTAGGGGTGGGGGCCCCACT+TGG - chr2_1:9860317-9860336 None:intergenic 75.0%
! GGAGCTGGCGTGGCAGGGGC+AGG - chr2_1:9854912-9854931 None:intergenic 80.0%
!!! GGCGGGGGCGGGTTTTGCCG+GGG - chr2_1:9857812-9857831 None:intergenic 80.0%
!! GGAGCTGGTGTGGCGGGGGC+GGG - chr2_1:9857823-9857842 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 9854807 9861051 9854807 ID=Msa0194000;Name=Msa0194000
chr2_1 mRNA 9854807 9861051 9854807 ID=Msa0194000-mRNA-1;Parent=Msa0194000;Name=Msa0194000-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|0|0|8|0|719
chr2_1 exon 9854807 9854999 9854807 ID=Msa0194000-mRNA-1:exon:4503;Parent=Msa0194000-mRNA-1
chr2_1 exon 9855006 9855216 9855006 ID=Msa0194000-mRNA-1:exon:4504;Parent=Msa0194000-mRNA-1
chr2_1 exon 9855247 9855418 9855247 ID=Msa0194000-mRNA-1:exon:4505;Parent=Msa0194000-mRNA-1
chr2_1 exon 9855428 9855614 9855428 ID=Msa0194000-mRNA-1:exon:4506;Parent=Msa0194000-mRNA-1
chr2_1 exon 9857911 9858127 9857911 ID=Msa0194000-mRNA-1:exon:4507;Parent=Msa0194000-mRNA-1
chr2_1 exon 9858179 9858329 9858179 ID=Msa0194000-mRNA-1:exon:4508;Parent=Msa0194000-mRNA-1
chr2_1 exon 9858339 9858509 9858339 ID=Msa0194000-mRNA-1:exon:4509;Parent=Msa0194000-mRNA-1
chr2_1 exon 9860194 9861051 9860194 ID=Msa0194000-mRNA-1:exon:4510;Parent=Msa0194000-mRNA-1
chr2_1 CDS 9854807 9854999 9854807 ID=Msa0194000-mRNA-1:cds;Parent=Msa0194000-mRNA-1
chr2_1 CDS 9855006 9855216 9855006 ID=Msa0194000-mRNA-1:cds;Parent=Msa0194000-mRNA-1
chr2_1 CDS 9855247 9855418 9855247 ID=Msa0194000-mRNA-1:cds;Parent=Msa0194000-mRNA-1
chr2_1 CDS 9855428 9855614 9855428 ID=Msa0194000-mRNA-1:cds;Parent=Msa0194000-mRNA-1
chr2_1 CDS 9857911 9858127 9857911 ID=Msa0194000-mRNA-1:cds;Parent=Msa0194000-mRNA-1
chr2_1 CDS 9858179 9858329 9858179 ID=Msa0194000-mRNA-1:cds;Parent=Msa0194000-mRNA-1
chr2_1 CDS 9858339 9858509 9858339 ID=Msa0194000-mRNA-1:cds;Parent=Msa0194000-mRNA-1
chr2_1 CDS 9860194 9861051 9860194 ID=Msa0194000-mRNA-1:cds;Parent=Msa0194000-mRNA-1
Gene Sequence

>Msa0194000

ATGAAGCAAATCATCTTCTTCACACTCTTAGTACTTTTTGCTCATGTCTTTTTTACCACTACAGCTCAATCACCTGCTGCAGCACCTAAAGCCGCAGCAAAACCTGCCCCTGCCACGCCAGCTCCAGCAACAGCACCGGCAAAACCATTAGTCCCCTCATTACCTCAATCACCCTCATCCGATTCATCTTCCGACATCATCAAAATCCTAAGAAAAGCTAAATCATTCAACACACTAATCCGTTTGCTCAAAACCACACAAATCATCAACCAAATTAACTCACAGCTGGTGACAACAAAAAACGGTGGTTTAACCATCCTCGCACCTGATGATGGTGCCTTTTCGCAGCTCAAAGCCGGATACTTCAATTCCCTCGGCGAACGCCAACAGAAAGAACTGATACACTCAAATTTTGATTCGCTTAGCAACCCGGTGCTGACCCTTGCCAGTGATAGCCCTTCTGGTTATCATATGAATGTGACTGCTTATGGAAACAATGTAAATATATCAACTGGGCCTGTCAATGCTACACTCACAGGGATTGTTTATTCTGATAAGACACTTGCTATATACCATGTGCTTATCCCTTTGGACTTCTCTAAGCCTAAGGCTCTAGCTCCTGCTCCTTCTACGGCAAAGGCACCTAAAGCTGCTAAGGATAGTTCATCTGAAGATGGTGATCAGGGAGAGACAACTAAAGCTACTTCTGGTGCCACCAATTTGATTAACCGTCAAGGAACAATGTTTGTGTCTTTTTTTGTTGGTCAAGACATCATCAAAATCCTAAGAAAAGCTAAATCATTCAACACTCTAATCCGCTTGCTCAAAACCACACAAATCATCAACCAAATTAACTCACAGCTAGTGACAACAAAAAATGGTGGTTTAACCATCCTTGCACCTGATGATGGTGCCTTTTCCCAACTCAAAGCCGGATACTTCAACTCCCTTGGCGAACGCCAACAGAAAGAACTGATACACAACCCTGTGCTGACGCTTGCCAGTGATAGCCCTTCTGGTTATCATATGAATGTGACTGCTTATGGAAACAATGTGAATATATCAACTGGGCCTGTTAATGCTACACTCACAGGGATTGTTTATTCTGATAAGACGCTTGCTATATATCATGTGCTTATTCCTTTGGATTTCTCTAAGCCTAAGGCTCTAGCTCCTGCTCCTGCTACGGCGAAGGCGCCTAAAGCTGATAAGGATAGTTCATCTGAAGATGGTGATCAAGGAGAGACAACTAAAGCTACTTCTGGTGCAAACAATTTGATTCACCTTCAAAGCACATTACTTCTACTAATTCTAATCCTCTACTATTCCACTACCACCTCAGCACAACTCTCACCAGTTCAATCTCCACAAGGCTCTACACCAGCACCAGGTTTCAACACAGTTCCCCTTGTACCAGTATCCCCAAGTGGGGCCCCCACCCCTAGTATTATCCCAAAATCACCATCCATAGACATTATCCAAATCCTCAAAAAAGCAAAAAGATTCTCAGTTCTTATCCGTCTTCTCAAAACAACTCAGTTAATAAACCAACTCAACTCACAAATAGTTACATCATCATCATCATCATCAGATTCTAGCAGTGGTGGCTTAACTCTTTTTGCACCAGAAGACAGTGCCTTTTCAAAACTCAAACCAGGTTTCCTTAATTCCCTCAGTGACAGACACAAAGTAGAACTATTACAATTCCACACACTTTCCTCATTCATCTCAATCTCGAACTTCGACACCTTAACCAACCCGGTTCAAACACAAGCTGGTGATGATGCCAAACGGTTACAACTTAATGTAACCACTTCTGGTGGTAGCCATGTTAGTATGACAACTGGCGCTGTTAACGCAACCGTTACAGGAACAGTTTACACAGACAACAAACTAGCTGTATATCAGGTTGACAAGGTTCTTGTTCCTCTTGATCTTGTGCTTCCTGCTAAAGCTCCTGCACTTGCACCTGCACCGGTTTCTAAAGGAGATTCATCTAAGCCTGATGATAGAAGCAAGTCATCATCATCAAAGGATGATGATGATGAGAATAATGACTTGCCTGCAGAAGCTTCTGGTGCTGGTTATTCAAACATGAAGGGAATGTGGCTGGCTCTTGTTTTTGGGATGGTTTTGCTTGCTGGTGAAGCAATGCTATGA
Protein sequence

>Msa0194000

MKQIIFFTLLVLFAHVFFTTTAQSPAAAPKAAAKPAPATPAPATAPAKPLVPSLPQSPSSDSSSDIIKILRKAKSFNTLIRLLKTTQIINQINSQLVTTKNGGLTILAPDDGAFSQLKAGYFNSLGERQQKELIHSNFDSLSNPVLTLASDSPSGYHMNVTAYGNNVNISTGPVNATLTGIVYSDKTLAIYHVLIPLDFSKPKALAPAPSTAKAPKAAKDSSSEDGDQGETTKATSGATNLINRQGTMFVSFFVGQDIIKILRKAKSFNTLIRLLKTTQIINQINSQLVTTKNGGLTILAPDDGAFSQLKAGYFNSLGERQQKELIHNPVLTLASDSPSGYHMNVTAYGNNVNISTGPVNATLTGIVYSDKTLAIYHVLIPLDFSKPKALAPAPATAKAPKADKDSSSEDGDQGETTKATSGANNLIHLQSTLLLLILILYYSTTTSAQLSPVQSPQGSTPAPGFNTVPLVPVSPSGAPTPSIIPKSPSIDIIQILKKAKRFSVLIRLLKTTQLINQLNSQIVTSSSSSSDSSSGGLTLFAPEDSAFSKLKPGFLNSLSDRHKVELLQFHTLSSFISISNFDTLTNPVQTQAGDDAKRLQLNVTTSGGSHVSMTTGAVNATVTGTVYTDNKLAVYQVDKVLVPLDLVLPAKAPALAPAPVSKGDSSKPDDRSKSSSSKDDDDENNDLPAEASGAGYSNMKGMWLALVFGMVLLAGEAML*