Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314220 | XP_003593816.1 | 33.103 | 290 | 120 | 11 | 5 | 227 | 7 | 289 | 2.19e-23 | 111 |
| Msa0314220 | XP_003593816.1 | 88.704 | 301 | 27 | 3 | 210 | 509 | 1 | 295 | 1.50e-172 | 498 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314220 | sp|Q8LEJ6|FLA11_ARATH | 42.975 | 242 | 91 | 8 | 217 | 457 | 8 | 203 | 3.17e-46 | 164 |
| Msa0314220 | sp|Q8LEJ6|FLA11_ARATH | 34.742 | 213 | 92 | 9 | 8 | 188 | 6 | 203 | 5.79e-19 | 89.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314220 | G7ILU0 | 33.103 | 290 | 120 | 11 | 5 | 227 | 7 | 289 | 1.05e-23 | 111 |
| Msa0314220 | G7ILU0 | 88.704 | 301 | 27 | 3 | 210 | 509 | 1 | 295 | 7.19e-173 | 498 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0142380 | Msa0314220 | 0.875411 | 3.146347e-68 | -8.615850e-47 |
| Msa0194000 | Msa0314220 | 0.943295 | 1.557708e-102 | -8.615850e-47 |
| Msa0221820 | Msa0314220 | 0.848598 | 5.535867e-60 | -8.615850e-47 |
| Msa0235870 | Msa0314220 | 0.927057 | 1.995467e-91 | -8.615850e-47 |
| Msa0250450 | Msa0314220 | 0.813394 | 2.616727e-51 | -8.615850e-47 |
| Msa0263440 | Msa0314220 | 0.912046 | 3.049890e-83 | -8.615850e-47 |
| Msa0269380 | Msa0314220 | 0.879185 | 1.531253e-69 | -8.615850e-47 |
| Msa0288900 | Msa0314220 | 0.943725 | 7.164466e-103 | -8.615850e-47 |
| Msa0301030 | Msa0314220 | 0.913713 | 4.470858e-84 | -8.615850e-47 |
| Msa0314220 | Msa0314330 | 0.916636 | 1.403846e-85 | -8.615850e-47 |
| Msa0314220 | Msa0327020 | 0.824931 | 6.175729e-54 | -8.615850e-47 |
| Msa0314220 | Msa0338580 | 0.875766 | 2.378283e-68 | -8.615850e-47 |
| Msa0314220 | Msa0485970 | 0.834975 | 2.196101e-56 | -8.615850e-47 |
| Msa0314220 | Msa0547390 | 0.893478 | 6.054416e-75 | -8.615850e-47 |
| Msa0314220 | Msa0565260 | 0.890689 | 7.851241e-74 | -8.615850e-47 |
| Msa0314220 | Msa0580580 | 0.808439 | 3.094895e-50 | -8.615850e-47 |
| Msa0314220 | Msa0602110 | 0.893897 | 4.095770e-75 | -8.615850e-47 |
| Msa0314220 | Msa0618050 | 0.814836 | 1.257807e-51 | -8.615850e-47 |
| Msa0314220 | Msa0618600 | 0.909683 | 4.343508e-82 | -8.615850e-47 |
| Msa0314220 | Msa0643240 | 0.925663 | 1.351763e-90 | -8.615850e-47 |
| Msa0314220 | Msa0657380 | 0.931828 | 2.119368e-94 | -8.615850e-47 |
| Msa0314220 | Msa0682920 | 0.894877 | 1.631123e-75 | -8.615850e-47 |
| Msa0314220 | Msa0708510 | 0.947293 | 8.916707e-106 | -8.615850e-47 |
| Msa0314220 | Msa0792190 | 0.879665 | 1.035075e-69 | -8.615850e-47 |
| Msa0314220 | Msa1035290 | 0.804784 | 1.829560e-49 | -8.615850e-47 |
| Msa0314220 | Msa1075380 | 0.832950 | 7.056300e-56 | -8.615850e-47 |
| Msa0314220 | Msa1116460 | 0.832962 | 7.004599e-56 | -8.615850e-47 |
| Msa0314220 | Msa1199250 | 0.937960 | 1.478915e-98 | -8.615850e-47 |
| Msa0314220 | Msa1199260 | 0.823318 | 1.477789e-53 | -8.615850e-47 |
| Msa0314220 | Msa1252480 | 0.921749 | 2.397129e-88 | -8.615850e-47 |
| Msa0314220 | Msa1267350 | 0.878549 | 2.566050e-69 | -8.615850e-47 |
| Msa0314220 | Msa1293220 | 0.931920 | 1.846065e-94 | -8.615850e-47 |
| Msa0314220 | Msa1421310 | 0.830700 | 2.533671e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314220 | MtrunA17_Chr2g0284451 | 88.704 | 301 | 27 | 3 | 210 | 509 | 1 | 295 | 1.38e-176 | 498 |
| Msa0314220 | MtrunA17_Chr2g0284451 | 33.103 | 290 | 120 | 11 | 5 | 227 | 7 | 289 | 2.01e-27 | 111 |
| Msa0314220 | MtrunA17_Chr8g0379621 | 59.451 | 328 | 85 | 9 | 213 | 508 | 5 | 316 | 4.12e-111 | 332 |
| Msa0314220 | MtrunA17_Chr8g0379621 | 40.782 | 179 | 78 | 5 | 73 | 224 | 134 | 311 | 4.77e-25 | 105 |
| Msa0314220 | MtrunA17_Chr8g0379631 | 59.756 | 328 | 84 | 10 | 213 | 508 | 5 | 316 | 1.50e-110 | 330 |
| Msa0314220 | MtrunA17_Chr8g0379631 | 40.782 | 179 | 78 | 5 | 73 | 224 | 134 | 311 | 4.13e-25 | 105 |
| Msa0314220 | MtrunA17_Chr2g0284431 | 73.913 | 276 | 25 | 2 | 1 | 229 | 22 | 297 | 1.01e-102 | 310 |
| Msa0314220 | MtrunA17_Chr2g0284431 | 46.053 | 228 | 104 | 5 | 279 | 505 | 89 | 298 | 5.02e-55 | 186 |
| Msa0314220 | MtrunA17_Chr2g0284411 | 73.913 | 276 | 25 | 2 | 1 | 229 | 1 | 276 | 9.66e-99 | 299 |
| Msa0314220 | MtrunA17_Chr2g0284411 | 48.624 | 218 | 95 | 5 | 279 | 496 | 68 | 268 | 2.46e-54 | 184 |
| Msa0314220 | MtrunA17_Chr4g0026611 | 47.811 | 297 | 124 | 7 | 220 | 503 | 13 | 291 | 4.75e-68 | 220 |
| Msa0314220 | MtrunA17_Chr4g0026611 | 43.548 | 248 | 75 | 8 | 3 | 189 | 8 | 251 | 4.60e-36 | 135 |
| Msa0314220 | MtrunA17_Chr4g0029501 | 43.607 | 305 | 146 | 7 | 210 | 503 | 1 | 290 | 1.25e-67 | 219 |
| Msa0314220 | MtrunA17_Chr4g0029501 | 43.701 | 254 | 79 | 8 | 1 | 193 | 4 | 254 | 1.49e-39 | 145 |
| Msa0314220 | MtrunA17_Chr2g0326411 | 44.218 | 294 | 143 | 7 | 219 | 505 | 9 | 288 | 2.29e-65 | 213 |
| Msa0314220 | MtrunA17_Chr2g0326411 | 35.417 | 288 | 117 | 8 | 2 | 227 | 6 | 286 | 3.46e-33 | 127 |
| Msa0314220 | MtrunA17_Chr8g0379611 | 58.736 | 269 | 52 | 6 | 17 | 226 | 16 | 284 | 5.30e-64 | 211 |
| Msa0314220 | MtrunA17_Chr8g0379611 | 42.562 | 242 | 114 | 4 | 272 | 505 | 62 | 286 | 1.95e-53 | 182 |
| Msa0314220 | MtrunA17_Chr4g0029331 | 53.846 | 221 | 64 | 4 | 218 | 438 | 28 | 210 | 1.41e-63 | 208 |
| Msa0314220 | MtrunA17_Chr4g0029331 | 41.622 | 185 | 86 | 6 | 7 | 172 | 31 | 212 | 6.04e-27 | 109 |
| Msa0314220 | MtrunA17_Chr4g0029441 | 48.800 | 250 | 102 | 7 | 231 | 468 | 22 | 257 | 9.87e-63 | 206 |
| Msa0314220 | MtrunA17_Chr4g0029441 | 46.535 | 202 | 49 | 6 | 51 | 193 | 53 | 254 | 3.32e-38 | 141 |
| Msa0314220 | MtrunA17_Chr2g0326431 | 59.375 | 160 | 54 | 2 | 279 | 438 | 41 | 189 | 1.61e-57 | 191 |
| Msa0314220 | MtrunA17_Chr2g0326431 | 48.624 | 109 | 43 | 1 | 73 | 168 | 79 | 187 | 2.81e-23 | 99.0 |
| Msa0314220 | MtrunA17_Chr2g0326421 | 42.908 | 282 | 127 | 8 | 220 | 491 | 9 | 266 | 3.26e-56 | 189 |
| Msa0314220 | MtrunA17_Chr2g0326421 | 39.721 | 287 | 111 | 10 | 1 | 229 | 1 | 283 | 8.04e-36 | 134 |
| Msa0314220 | MtrunA17_Chr4g0029431 | 52.577 | 194 | 74 | 5 | 243 | 436 | 39 | 214 | 1.18e-50 | 174 |
| Msa0314220 | MtrunA17_Chr4g0029431 | 44.330 | 194 | 58 | 5 | 23 | 168 | 23 | 214 | 3.23e-34 | 130 |
| Msa0314220 | MtrunA17_Chr7g0263981 | 47.126 | 174 | 79 | 4 | 264 | 436 | 26 | 187 | 2.53e-41 | 149 |
| Msa0314220 | MtrunA17_Chr7g0263981 | 44.444 | 108 | 46 | 3 | 73 | 166 | 78 | 185 | 9.61e-17 | 80.1 |
| Msa0314220 | MtrunA17_Chr2g0325021 | 31.923 | 260 | 132 | 9 | 258 | 502 | 20 | 249 | 3.53e-26 | 107 |
| Msa0314220 | MtrunA17_Chr2g0325021 | 41.346 | 104 | 48 | 2 | 75 | 165 | 78 | 181 | 2.07e-14 | 73.2 |
| Msa0314220 | MtrunA17_Chr5g0448001 | 31.034 | 174 | 104 | 4 | 278 | 449 | 47 | 206 | 3.69e-16 | 78.6 |
| Msa0314220 | MtrunA17_Chr7g0246041 | 32.796 | 186 | 96 | 6 | 273 | 449 | 178 | 343 | 3.92e-15 | 77.4 |
| Msa0314220 | MtrunA17_Chr2g0296571 | 29.651 | 172 | 99 | 5 | 269 | 436 | 190 | 343 | 1.53e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0314220 | AT5G03170.1 | 42.975 | 242 | 91 | 8 | 217 | 457 | 8 | 203 | 3.22e-47 | 164 |
| Msa0314220 | AT5G03170.1 | 34.742 | 213 | 92 | 9 | 8 | 188 | 6 | 203 | 5.89e-20 | 89.7 |
| Msa0314220 | AT5G60490.1 | 51.923 | 156 | 63 | 3 | 279 | 433 | 39 | 183 | 3.07e-44 | 156 |
| Msa0314220 | AT5G60490.1 | 53.271 | 107 | 36 | 3 | 73 | 165 | 77 | 183 | 1.22e-22 | 97.4 |
| Msa0314220 | AT5G44130.1 | 37.089 | 213 | 114 | 4 | 278 | 488 | 35 | 229 | 9.45e-30 | 117 |
| Msa0314220 | AT5G44130.1 | 37.179 | 156 | 79 | 5 | 73 | 209 | 74 | 229 | 2.55e-15 | 76.3 |
| Msa0314220 | AT2G20520.1 | 38.182 | 220 | 116 | 7 | 255 | 467 | 17 | 223 | 2.97e-29 | 115 |
| Msa0314220 | AT2G20520.1 | 37.975 | 158 | 69 | 7 | 73 | 205 | 76 | 229 | 2.96e-12 | 67.0 |
| Msa0314220 | AT1G03870.1 | 33.333 | 228 | 128 | 5 | 278 | 504 | 38 | 242 | 2.68e-27 | 110 |
| Msa0314220 | AT1G03870.1 | 37.415 | 147 | 73 | 5 | 73 | 205 | 77 | 218 | 3.81e-13 | 69.7 |
| Msa0314220 | AT3G46550.1 | 33.696 | 184 | 105 | 5 | 270 | 449 | 198 | 368 | 4.34e-18 | 87.0 |
| Msa0314220 | AT4G12730.1 | 29.534 | 193 | 119 | 6 | 321 | 503 | 218 | 403 | 8.07e-11 | 64.3 |
| Msa0314220 | AT3G60900.1 | 33.333 | 126 | 83 | 1 | 326 | 451 | 223 | 347 | 9.76e-11 | 64.3 |
Find 128 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTCTATGGATGGTGATTT+TGG | 0.215958 | 2_4:-9883835 | None:intergenic |
| CAAATAAATGTGACTGCTTA+TGG | 0.258483 | 2_4:+9881625 | Msa0314220:CDS |
| CAACTTAATGTAACCACTTC+TGG | 0.262903 | 2_4:+9884186 | Msa0314220:CDS |
| GGGGCCCCACTTGGGGATAC+TGG | 0.273802 | 2_4:-9883796 | None:intergenic |
| TTTGAAAAGGCACTGTCTTC+TGG | 0.282142 | 2_4:-9884012 | None:intergenic |
| GTTGCAGGAGCTGGTGTGGC+AGG | 0.289751 | 2_4:-9881229 | None:intergenic |
| GTCTGTCACTGAGGGAATTA+AGG | 0.293100 | 2_4:-9884050 | None:intergenic |
| GTTTCAGGAGCTGGTGTGGC+AGG | 0.295696 | 2_4:+9879655 | None:intergenic |
| GAGGATTTGGATAATGTCTA+TGG | 0.319762 | 2_4:-9883848 | None:intergenic |
| CTGGCTAGTGATAGCCCTTC+TGG | 0.326211 | 2_4:+9881598 | Msa0314220:CDS |
| TGATAAGGTGCTTATTCCTT+TGG | 0.333318 | 2_4:+9881735 | Msa0314220:CDS |
| GGAGCTGGTGTGGCAGGGGC+AGG | 0.337086 | 2_4:-9881223 | None:intergenic |
| GGAGCTGGTGTGGCAGGGGC+AGG | 0.341461 | 2_4:+9879661 | None:intergenic |
| CAACAAACTAGCTGTATATC+AGG | 0.345531 | 2_4:+9884275 | Msa0314220:CDS |
| AACAATTTGATTAGCCTTCA+AGG | 0.346115 | 2_4:+9881880 | Msa0314220:CDS |
| GCTGGTGCTGTTGCAGGAGC+TGG | 0.349087 | 2_4:-9881238 | None:intergenic |
| TGTGAATATTTCAACTGTTT+CGG | 0.354592 | 2_4:+9881654 | Msa0314220:CDS |
| GCTGTTAACGCAACCGTTAC+AGG | 0.357416 | 2_4:+9884237 | Msa0314220:CDS |
| TACATTAAGTTGTAACCGTT+TGG | 0.376789 | 2_4:-9884175 | None:intergenic |
| TCACCAGCTTGTGTTTGAAC+CGG | 0.397830 | 2_4:-9884147 | None:intergenic |
| CCTGCAGAAGCTTCTGGTGC+TGG | 0.401485 | 2_4:+9884450 | Msa0314220:CDS |
| GAACTATCCTTATCAGCTTT+AGG | 0.420123 | 2_4:-9881808 | None:intergenic |
| GACTTGCCTGCAGAAGCTTC+TGG | 0.421044 | 2_4:+9884444 | Msa0314220:CDS |
| GGAGCAGGAGCTAGAGCCTT+AGG | 0.421990 | 2_4:-9881769 | None:intergenic |
| TGGGAAAAGGCACCGTCATC+AGG | 0.426159 | 2_4:-9881451 | None:intergenic |
| TTGAGGTAATGAAGGGACTA+AGG | 0.430182 | 2_4:-9881266 | None:intergenic |
| GAGTCAACTAAAGCTACTTC+TGG | 0.430524 | 2_4:+9881853 | Msa0314220:CDS |
| TTGCAGGAGCTGGTGTGGCA+GGG | 0.432662 | 2_4:-9881228 | None:intergenic |
| AAACAAATATTGTTCCTTGA+AGG | 0.435858 | 2_4:-9881894 | None:intergenic |
| GATGAATCTCCTTTAGAAAC+CGG | 0.436210 | 2_4:-9884363 | None:intergenic |
| TTCAGGAGCTGGTGTGGCAG+GGG | 0.436553 | 2_4:+9879657 | None:intergenic |
| CTTTCTGTTGGCGTTCGCCA+AGG | 0.437630 | 2_4:-9881498 | None:intergenic |
| GAGGTATCCGGCTTTGAGTT+GGG | 0.438548 | 2_4:-9881470 | None:intergenic |
| TCCTGCTCCTGCTACGGCGA+AGG | 0.440885 | 2_4:+9881783 | Msa0314220:CDS |
| TGCAGGAGCTGGTGTGGCAG+GGG | 0.444125 | 2_4:-9881227 | None:intergenic |
| TTAGGCGCCTTCGCCGTAGC+AGG | 0.446841 | 2_4:-9881790 | None:intergenic |
| ACTGTATCAGTTCTTTCTGT+TGG | 0.447264 | 2_4:-9881510 | None:intergenic |
| TTTGGACTTCTCTAAGCCTA+AGG | 0.449583 | 2_4:+9881753 | Msa0314220:CDS |
| TGTTTGAACCGGGTTGGTTA+AGG | 0.453918 | 2_4:-9884136 | None:intergenic |
| TGCTATATATCATGTTGATA+AGG | 0.455547 | 2_4:+9881720 | Msa0314220:CDS |
| GCCTTCGCCGTAGCAGGAGC+AGG | 0.456420 | 2_4:-9881784 | None:intergenic |
| TTTCAGGAGCTGGTGTGGCA+GGG | 0.457824 | 2_4:+9879656 | None:intergenic |
| TAACTATTTGTGAGTTGAGT+TGG | 0.460271 | 2_4:-9883930 | None:intergenic |
| TCCTGCACTTGCACCTGCAC+CGG | 0.461846 | 2_4:+9884344 | Msa0314220:CDS |
| CACCAGCTTGTGTTTGAACC+GGG | 0.466085 | 2_4:-9884146 | None:intergenic |
| GATGACTTGCTTCTATCATC+AGG | 0.467697 | 2_4:-9884390 | None:intergenic |
| CCCTCATCGGATTCTTCGTC+CGG | 0.469506 | 2_4:+9881292 | Msa0314220:CDS |
| TGGGATAATACTAGGGGTGG+GGG | 0.470197 | 2_4:-9883815 | None:intergenic |
| GCCAAGGGAGTTGAGGTATC+CGG | 0.470562 | 2_4:-9881482 | None:intergenic |
| ACCGGTGCAGGTGCAAGTGC+AGG | 0.474053 | 2_4:-9884345 | None:intergenic |
| TCCGGCTTTGAGTTGGGAAA+AGG | 0.474368 | 2_4:-9881464 | None:intergenic |
| GCACCTGCACCGGTTTCTAA+AGG | 0.482663 | 2_4:+9884354 | Msa0314220:CDS |
| GAGGGTGATTGAGGTAATGA+AGG | 0.486966 | 2_4:-9881274 | None:intergenic |
| TTTCTGTTGGCGTTCGCCAA+GGG | 0.488696 | 2_4:-9881497 | None:intergenic |
| GGGGCTTTAGGTGCTGCAGC+AGG | 0.491705 | 2_4:+9879691 | Msa0314220:five_prime_UTR |
| TGGGCTTTAGGTGCTGCAGC+AGG | 0.491705 | 2_4:-9881193 | None:intergenic |
| CTGAGGGAATTAAGGAAACC+TGG | 0.491886 | 2_4:-9884042 | None:intergenic |
| TGCTGTTGCAGGAGCTGGTG+TGG | 0.496022 | 2_4:-9881233 | None:intergenic |
| GAGTTGTGCTGAGGTGGTAG+TGG | 0.496520 | 2_4:-9883710 | None:intergenic |
| AGCCATGTTAGTATGACAAC+TGG | 0.497715 | 2_4:+9884213 | Msa0314220:CDS |
| GCAAGTGCAGGAGCTTTAGC+AGG | 0.504101 | 2_4:-9884333 | None:intergenic |
| TGAGGTATCCGGCTTTGAGT+TGG | 0.505906 | 2_4:-9881471 | None:intergenic |
| AAATATGAACAGGTAATACT+AGG | 0.507707 | 2_4:-9881144 | None:intergenic |
| TACTTTGTGTCTGTCACTGA+GGG | 0.508476 | 2_4:-9884058 | None:intergenic |
| AGCTTGTGTTTGAACCGGGT+TGG | 0.515091 | 2_4:-9884142 | None:intergenic |
| TTGGGATAATACTAGGGGTG+GGG | 0.515374 | 2_4:-9883816 | None:intergenic |
| TGCTGGTTATTCAAACATGA+AGG | 0.522342 | 2_4:+9884467 | Msa0314220:CDS |
| TCATCTGAAGATGGTGATCA+AGG | 0.523011 | 2_4:+9881829 | Msa0314220:CDS |
| GCCGGATACCTCAACTCCCT+TGG | 0.523856 | 2_4:+9881481 | Msa0314220:CDS |
| TCACTAGCCAGTGTCAGCAC+AGG | 0.524006 | 2_4:-9881586 | None:intergenic |
| GAATCCGATGAGGGTGATTG+AGG | 0.532961 | 2_4:-9881283 | None:intergenic |
| TGAGGTAATGAAGGGACTAA+GGG | 0.535742 | 2_4:-9881265 | None:intergenic |
| ACTGTGTTGAAACCTGGTGC+TGG | 0.536826 | 2_4:-9883763 | None:intergenic |
| AAACATGAAGGGAATGTGGC+TGG | 0.539849 | 2_4:+9884479 | Msa0314220:CDS |
| TTGTACCAGTATCCCCAAGT+GGG | 0.540353 | 2_4:+9883791 | Msa0314220:CDS |
| TGCTGCAGCACCTAAAGCCC+AGG | 0.541455 | 2_4:+9881195 | Msa0314220:CDS |
| GCCATCCTTGCACCTGATGA+CGG | 0.541665 | 2_4:+9881439 | Msa0314220:intron |
| GAAGGCGCCTAAAGCTGATA+AGG | 0.542783 | 2_4:+9881801 | Msa0314220:CDS |
| TCTAGCTCCTGCTCCTGCTA+CGG | 0.543999 | 2_4:+9881777 | Msa0314220:CDS |
| ACCGTCATCAGGTGCAAGGA+TGG | 0.544385 | 2_4:-9881440 | None:intergenic |
| TGCTGTTTCAGGAGCTGGTG+TGG | 0.544400 | 2_4:+9879651 | None:intergenic |
| ACTTGGGGATACTGGTACAA+GGG | 0.551131 | 2_4:-9883788 | None:intergenic |
| ATTACCTCAATCACCCTCAT+CGG | 0.563203 | 2_4:+9881279 | Msa0314220:CDS |
| AACCCGGTTCAAACACAAGC+TGG | 0.563882 | 2_4:+9884144 | Msa0314220:CDS |
| CACTTGGGGATACTGGTACA+AGG | 0.572766 | 2_4:-9883789 | None:intergenic |
| CCAGCACCAGAAGCTTCTGC+AGG | 0.575502 | 2_4:-9884450 | None:intergenic |
| AAGGATAGTTCATCTGAAGA+TGG | 0.575616 | 2_4:+9881820 | Msa0314220:CDS |
| TGTGTAAACTGTTCCTGTAA+CGG | 0.577811 | 2_4:-9884250 | None:intergenic |
| CACTAGCCAGTGTCAGCACA+GGG | 0.581566 | 2_4:-9881585 | None:intergenic |
| TCTCCTTTAGAAACCGGTGC+AGG | 0.582465 | 2_4:-9884357 | None:intergenic |
| TAGCAACCCTGTGCTGACAC+TGG | 0.583096 | 2_4:+9881579 | Msa0314220:CDS |
| CATTTATTTGATAACCAGAA+GGG | 0.584454 | 2_4:-9881612 | None:intergenic |
| CGCCAGTTGTCATACTAACA+TGG | 0.584465 | 2_4:-9884215 | None:intergenic |
| AAGCAAGTCATCATCATCAA+AGG | 0.585762 | 2_4:+9884401 | Msa0314220:CDS |
| GAGCCTTGTGGAGATTGAAC+TGG | 0.585816 | 2_4:-9883736 | None:intergenic |
| ACATTTATTTGATAACCAGA+AGG | 0.586082 | 2_4:-9881613 | None:intergenic |
| AACATGGCTACCACCAGAAG+TGG | 0.588263 | 2_4:-9884199 | None:intergenic |
| TTTGGGATAATACTAGGGGT+GGG | 0.590604 | 2_4:-9883817 | None:intergenic |
| AGGGTGATTGAGGTAATGAA+GGG | 0.591055 | 2_4:-9881273 | None:intergenic |
| AAGCTGGTGATGATGCCAAA+CGG | 0.591660 | 2_4:+9884160 | Msa0314220:CDS |
| GGCGTTCGCCAAGGGAGTTG+AGG | 0.592554 | 2_4:-9881489 | None:intergenic |
| CAAGGCTCTACACCAGCACC+AGG | 0.592984 | 2_4:+9883751 | Msa0314220:CDS |
| AGGTGGTAGTGGAATAGTAG+AGG | 0.597674 | 2_4:-9883699 | None:intergenic |
| TGGTGAGAGTTGTGCTGAGG+TGG | 0.600028 | 2_4:-9883716 | None:intergenic |
| TCATCAGATTCTAGCAGTGG+TGG | 0.601527 | 2_4:+9883973 | Msa0314220:CDS |
| GTTCGAGATTGAGATGAATG+AGG | 0.603007 | 2_4:-9884106 | None:intergenic |
| GCAGGAAGCACAAGATCAAG+AGG | 0.606292 | 2_4:-9884315 | None:intergenic |
| AGGTGATTGAGCTGAAGTAG+TGG | 0.615321 | 2_4:-9881173 | None:intergenic |
| AGGCACCGTCATCAGGTGCA+AGG | 0.615621 | 2_4:-9881444 | None:intergenic |
| TTAGGCTTAGAGAAGTCCAA+AGG | 0.622631 | 2_4:-9881751 | None:intergenic |
| TCATCATCAGATTCTAGCAG+TGG | 0.623234 | 2_4:+9883970 | Msa0314220:CDS |
| AGGGGAACTGTGTTGAAACC+TGG | 0.625049 | 2_4:-9883769 | None:intergenic |
| ATTCAAACATGAAGGGAATG+TGG | 0.627234 | 2_4:+9884475 | Msa0314220:CDS |
| CTTCGACACCTTAACCAACC+CGG | 0.629726 | 2_4:+9884128 | Msa0314220:CDS |
| GCTGGTTATTCAAACATGAA+GGG | 0.633452 | 2_4:+9884468 | Msa0314220:CDS |
| CTTGTACCAGTATCCCCAAG+TGG | 0.637536 | 2_4:+9883790 | Msa0314220:CDS |
| CTTGGGGATACTGGTACAAG+GGG | 0.638164 | 2_4:-9883787 | None:intergenic |
| TGTACCAGTATCCCCAAGTG+GGG | 0.638673 | 2_4:+9883792 | Msa0314220:CDS |
| AGCTGTATATCAGGTTGACA+AGG | 0.639083 | 2_4:+9884284 | Msa0314220:CDS |
| ATTTGGATAATGTCTATGGA+TGG | 0.646970 | 2_4:-9883844 | None:intergenic |
| CTACTTTGTGTCTGTCACTG+AGG | 0.651942 | 2_4:-9884059 | None:intergenic |
| GGTGCTGGTGTAGAGCCTTG+TGG | 0.655706 | 2_4:-9883748 | None:intergenic |
| CTTAATGTAACCACTTCTGG+TGG | 0.658842 | 2_4:+9884189 | Msa0314220:CDS |
| ACCGGACGAAGAATCCGATG+AGG | 0.663646 | 2_4:-9881293 | None:intergenic |
| AGATGAATGAGGAAAGTGTG+TGG | 0.666640 | 2_4:-9884095 | None:intergenic |
| CCGGACGAAGAATCCGATGA+GGG | 0.669297 | 2_4:-9881292 | None:intergenic |
| AACTGGTGAGAGTTGTGCTG+AGG | 0.689213 | 2_4:-9883719 | None:intergenic |
| TCACCAGTTCAATCTCCACA+AGG | 0.696002 | 2_4:+9883733 | Msa0314220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAAAGTTTTTAGAAATAT+TGG | + | chr2_4:9882459-9882478 | Msa0314220:intron | 10.0% |
| !! | CAATAAATTATCAATGATTA+TGG | - | chr2_4:9880156-9880175 | None:intergenic | 15.0% |
| !!! | CATAATCATTGATAATTTAT+TGG | + | chr2_4:9880154-9880173 | Msa0314220:intron | 15.0% |
| !! | TAATTATTAAAAGATTATGC+AGG | - | chr2_4:9880905-9880924 | None:intergenic | 15.0% |
| !!! | ATTAAACTCCATTTAATTTT+GGG | - | chr2_4:9883184-9883203 | None:intergenic | 15.0% |
| !!! | AATTAAACTCCATTTAATTT+TGG | - | chr2_4:9883185-9883204 | None:intergenic | 15.0% |
| !! | AAATTAAATGGAGTTTAATT+TGG | + | chr2_4:9883185-9883204 | Msa0314220:intron | 15.0% |
| !! | AAAATTATCATATAATGTAC+TGG | + | chr2_4:9883382-9883401 | Msa0314220:intron | 15.0% |
| !!! | CAACATTTTTTATATCAATT+AGG | - | chr2_4:9883451-9883470 | None:intergenic | 15.0% |
| !!! | GGTAAACTCTATTTAATTTT+GGG | - | chr2_4:9880204-9880223 | None:intergenic | 20.0% |
| !!! | TGGTAAACTCTATTTAATTT+TGG | - | chr2_4:9880205-9880224 | None:intergenic | 20.0% |
| !!! | TTCTAAATTTTTTTCTGCAT+TGG | - | chr2_4:9880467-9880486 | None:intergenic | 20.0% |
| !!! | AAAAAATTTAGAATCCTTCA+TGG | + | chr2_4:9880474-9880493 | Msa0314220:intron | 20.0% |
| !!! | AAAAATTTAGAATCCTTCAT+GGG | + | chr2_4:9880475-9880494 | Msa0314220:intron | 20.0% |
| !! | ATGAAAATATGATTGGAAAA+GGG | - | chr2_4:9880791-9880810 | None:intergenic | 20.0% |
| !! | TATGAAAATATGATTGGAAA+AGG | - | chr2_4:9880792-9880811 | None:intergenic | 20.0% |
| !! | TAGTTTAGTTAGAAAGAAAA+GGG | - | chr2_4:9881017-9881036 | None:intergenic | 20.0% |
| !! | TTAGTTTAGTTAGAAAGAAA+AGG | - | chr2_4:9881018-9881037 | None:intergenic | 20.0% |
| !!! | TTTTTCCTTTTTATTGTCTT+AGG | + | chr2_4:9882371-9882390 | Msa0314220:intron | 20.0% |
| !!! | TTTTCCTTTTTATTGTCTTA+GGG | + | chr2_4:9882372-9882391 | Msa0314220:intron | 20.0% |
| !!! | GTTTTCTGATAAATGTAAAA+TGG | + | chr2_4:9882969-9882988 | Msa0314220:intron | 20.0% |
| !! | NNNNCTTTACAACAATATGT+TGG | - | chr2_4:9883241-9883260 | None:intergenic | 20.0% |
| ! | AAACATTAGAGAAGACATAA+TGG | - | chr2_4:9879888-9879907 | None:intergenic | 25.0% |
| ! | GTATTTAGTTATTCATGCAT+TGG | - | chr2_4:9880277-9880296 | None:intergenic | 25.0% |
| ! | GTAACTTTAGCACATAAATT+TGG | - | chr2_4:9880302-9880321 | None:intergenic | 25.0% |
| ! | GAATGTTCTTAAATCTTATG+AGG | - | chr2_4:9880345-9880364 | None:intergenic | 25.0% |
| !! | GAACATTCACATATTTTACA+AGG | + | chr2_4:9880357-9880376 | Msa0314220:intron | 25.0% |
| ! | CTAATCTTAGAATATGCTAT+TGG | + | chr2_4:9880619-9880638 | Msa0314220:intron | 25.0% |
| ! | TTAATTACCAAATCTTTGTC+AGG | + | chr2_4:9880675-9880694 | Msa0314220:intron | 25.0% |
| !! | TGATTATTTCCTTTTCTTTC+TGG | + | chr2_4:9880728-9880747 | Msa0314220:intron | 25.0% |
| ! | TGAAAATATGATTGGAAAAG+GGG | - | chr2_4:9880790-9880809 | None:intergenic | 25.0% |
| ! | GTGTGATATGAAAATATGAT+TGG | - | chr2_4:9880798-9880817 | None:intergenic | 25.0% |
| ! | AGTTTAGTTAGAAAGAAAAG+GGG | - | chr2_4:9881016-9881035 | None:intergenic | 25.0% |
| ! | CTAGATAGTTTATCTGTATT+TGG | - | chr2_4:9881094-9881113 | None:intergenic | 25.0% |
| ! | AAATATGAACAGGTAATACT+AGG | - | chr2_4:9881147-9881166 | None:intergenic | 25.0% |
| ! | GTGGTAAAAAAAATATGAAC+AGG | - | chr2_4:9881157-9881176 | None:intergenic | 25.0% |
| !! | CATTTATTTGATAACCAGAA+GGG | - | chr2_4:9881615-9881634 | None:intergenic | 25.0% |
| !! | ACATTTATTTGATAACCAGA+AGG | - | chr2_4:9881616-9881635 | None:intergenic | 25.0% |
| ! | TGTGAATATTTCAACTGTTT+CGG | + | chr2_4:9881654-9881673 | Msa0314220:CDS | 25.0% |
| ! | TGCTATATATCATGTTGATA+AGG | + | chr2_4:9881720-9881739 | Msa0314220:CDS | 25.0% |
| ! | AAACAAATATTGTTCCTTGA+AGG | - | chr2_4:9881897-9881916 | None:intergenic | 25.0% |
| !!! | TGTTTTGTTTTGTATTGTCA+TGG | + | chr2_4:9882017-9882036 | Msa0314220:intron | 25.0% |
| !!! | GTTTTGTTTTGTATTGTCAT+GGG | + | chr2_4:9882018-9882037 | Msa0314220:intron | 25.0% |
| !! | CATTCCTGATTTTATTCATT+TGG | + | chr2_4:9882086-9882105 | Msa0314220:intron | 25.0% |
| ! | TTCACCAAATGAATAAAATC+AGG | - | chr2_4:9882093-9882112 | None:intergenic | 25.0% |
| ! | AATCTTGTTAGAAAGTAAAC+AGG | - | chr2_4:9882289-9882308 | None:intergenic | 25.0% |
| ! | GATTTCACTTTGTATATGAA+TGG | + | chr2_4:9882325-9882344 | Msa0314220:intron | 25.0% |
| ! | AAACATTAGAGAAGACATAA+TGG | - | chr2_4:9879888-9879907 | None:intergenic | 25.0% |
| ! | ACCTATTATATTAACCAACA+TGG | + | chr2_4:9882744-9882763 | Msa0314220:intron | 25.0% |
| !! | TCCATGTTGGTTAATATAAT+AGG | - | chr2_4:9882748-9882767 | None:intergenic | 25.0% |
| ! | TTATCAGTGAAAATGAAAAC+AGG | + | chr2_4:9882835-9882854 | Msa0314220:intron | 25.0% |
| ! | TCTGATAAATGTAAAATGGT+TGG | + | chr2_4:9882973-9882992 | Msa0314220:intron | 25.0% |
| ! | GAAAAAATGAGAATGTAGAT+TGG | - | chr2_4:9883011-9883030 | None:intergenic | 25.0% |
| !!! | ACATTCTCATTTTTTCACAA+TGG | + | chr2_4:9883015-9883034 | Msa0314220:intron | 25.0% |
| !!! | CATTCTCATTTTTTCACAAT+GGG | + | chr2_4:9883016-9883035 | Msa0314220:intron | 25.0% |
| ! | TAAAAAGTTCTCAGTGTTTA+TGG | - | chr2_4:9883136-9883155 | None:intergenic | 25.0% |
| ! | AAGTATGTCCCAAAATTAAA+TGG | + | chr2_4:9880193-9880212 | Msa0314220:intron | 25.0% |
| !! | TTGAATGTTGATTAGTGTTT+AGG | - | chr2_4:9883610-9883629 | None:intergenic | 25.0% |
| !!! | TTTTTGCTTTTTTGAGGATT+TGG | - | chr2_4:9883864-9883883 | None:intergenic | 25.0% |
| !!! | AGAATCTTTTTGCTTTTTTG+AGG | - | chr2_4:9883870-9883889 | None:intergenic | 25.0% |
| CTCTCTTAGTCAAAACATAA+TGG | - | chr2_4:9879755-9879774 | None:intergenic | 30.0% | |
| TCAGTCTGCTTATATAGATA+AGG | - | chr2_4:9879981-9880000 | None:intergenic | 30.0% | |
| TATCAATTGATCCATTACCA+AGG | - | chr2_4:9880022-9880041 | None:intergenic | 30.0% | |
| ATAGATAGAAAGCTCTATGA+TGG | + | chr2_4:9880039-9880058 | Msa0314220:intron | 30.0% | |
| TAGATAGAAAGCTCTATGAT+GGG | + | chr2_4:9880040-9880059 | Msa0314220:intron | 30.0% | |
| ACCTATTAGATTAACCAACA+TGG | + | chr2_4:9880095-9880114 | Msa0314220:intron | 30.0% | |
| ! | TCCATGTTGGTTAATCTAAT+AGG | - | chr2_4:9880099-9880118 | None:intergenic | 30.0% |
| !!! | TGTGCTAAAGTTACTTTTTG+AGG | + | chr2_4:9880308-9880327 | Msa0314220:intron | 30.0% |
| GTGAATTTACAACAGTATGT+CGG | - | chr2_4:9880438-9880457 | None:intergenic | 30.0% | |
| ! | AGATTTGGTAATTAAGACTG+AGG | - | chr2_4:9880670-9880689 | None:intergenic | 30.0% |
| TTTCATCACATCTTAAGAGT+TGG | - | chr2_4:9880840-9880859 | None:intergenic | 30.0% | |
| TGATTAATTAGTTGTGAGAG+TGG | - | chr2_4:9880952-9880971 | None:intergenic | 30.0% | |
| !!! | AATTTTGATGATGTCTTGAC+CGG | - | chr2_4:9881314-9881333 | None:intergenic | 30.0% |
| !! | AATTTGGTTGATGATTTGTG+TGG | - | chr2_4:9881383-9881402 | None:intergenic | 30.0% |
| CAAATAAATGTGACTGCTTA+TGG | + | chr2_4:9881625-9881644 | Msa0314220:CDS | 30.0% | |
| !! | AACAATTTGATTAGCCTTCA+AGG | + | chr2_4:9881880-9881899 | Msa0314220:CDS | 30.0% |
| ATGAAGACCAATACATTTGA+AGG | + | chr2_4:9881951-9881970 | Msa0314220:intron | 30.0% | |
| ATAACAGCCTTCAAATGTAT+TGG | - | chr2_4:9881961-9881980 | None:intergenic | 30.0% | |
| GTTCTATTGTGTTCTTTACT+CGG | + | chr2_4:9881991-9882010 | Msa0314220:intron | 30.0% | |
| ATAGTGAATTACTCTCTCTT+TGG | + | chr2_4:9882188-9882207 | Msa0314220:intron | 30.0% | |
| GCACAAAATAGTTATAGAGA+AGG | - | chr2_4:9882235-9882254 | None:intergenic | 30.0% | |
| GACATACTTGATGAAACTAA+GGG | + | chr2_4:9882263-9882282 | Msa0314220:intron | 30.0% | |
| TTCTCCCTAAGACAATAAAA+AGG | - | chr2_4:9882379-9882398 | None:intergenic | 30.0% | |
| GTAGACTGCATATATAGATA+AGG | - | chr2_4:9882625-9882644 | None:intergenic | 30.0% | |
| TTATGAACGAATTAGTTCCT+TGG | + | chr2_4:9882654-9882673 | Msa0314220:intron | 30.0% | |
| TATAGATTGATCCAATACCA+AGG | - | chr2_4:9882674-9882693 | None:intergenic | 30.0% | |
| TAGATAGAAAGCTCTATGAT+TGG | + | chr2_4:9880040-9880059 | Msa0314220:intron | 30.0% | |
| ACTGATAAAATGATGAGTTG+AGG | - | chr2_4:9882823-9882842 | None:intergenic | 30.0% | |
| ! | ATTTAGCATTTGCTCACTTT+TGG | - | chr2_4:9882866-9882885 | None:intergenic | 30.0% |
| AATACATCCAAACAACAATC+AGG | - | chr2_4:9883071-9883090 | None:intergenic | 30.0% | |
| ! | AAACACTGAGAACTTTTTAG+CGG | + | chr2_4:9883137-9883156 | Msa0314220:intron | 30.0% |
| GTAGCAAATAATAACTGTCA+GGG | - | chr2_4:9883429-9883448 | None:intergenic | 30.0% | |
| ! | GTGAAAGGTTTAGTTTAGTT+AGG | - | chr2_4:9883491-9883510 | None:intergenic | 30.0% |
| ! | CTTTTATTGAGGATTCTCAT+TGG | - | chr2_4:9883513-9883532 | None:intergenic | 30.0% |
| TTTATTTGTGTCCTTATGTG+AGG | - | chr2_4:9883556-9883575 | None:intergenic | 30.0% | |
| AATTAGTAGCTGTAGAATTG+AGG | - | chr2_4:9883674-9883693 | None:intergenic | 30.0% | |
| !!! | TGATTTTGGGATAATACTAG+GGG | - | chr2_4:9883824-9883843 | None:intergenic | 30.0% |
| !!! | GTGATTTTGGGATAATACTA+GGG | - | chr2_4:9883825-9883844 | None:intergenic | 30.0% |
| ATTTGGATAATGTCTATGGA+TGG | - | chr2_4:9883847-9883866 | None:intergenic | 30.0% | |
| ! | TAACTATTTGTGAGTTGAGT+TGG | - | chr2_4:9883933-9883952 | None:intergenic | 30.0% |
| ! | TACATTAAGTTGTAACCGTT+TGG | - | chr2_4:9884178-9884197 | None:intergenic | 30.0% |
| ACTAAGAGAGAACACTAAGA+GGG | + | chr2_4:9879765-9879784 | Msa0314220:intron | 35.0% | |
| TTATGAACGAATTAGCTCCT+TGG | + | chr2_4:9880002-9880021 | Msa0314220:intron | 35.0% | |
| GAGTCAAATTACGCAATCAA+TGG | - | chr2_4:9880225-9880244 | None:intergenic | 35.0% | |
| GATTGCGTAATTTGACTCTA+CGG | + | chr2_4:9880227-9880246 | Msa0314220:intron | 35.0% | |
| CCAAAGAAATACTTCGATTG+TGG | - | chr2_4:9880385-9880404 | None:intergenic | 35.0% | |
| ! | CCACAATCGAAGTATTTCTT+TGG | + | chr2_4:9880382-9880401 | Msa0314220:intron | 35.0% |
| !!! | TTTGTGTGGTTTTGAGCAAA+CGG | - | chr2_4:9881369-9881388 | None:intergenic | 35.0% |
| ACTGTATCAGTTCTTTCTGT+TGG | - | chr2_4:9881513-9881532 | None:intergenic | 35.0% | |
| ! | TGATAAGGTGCTTATTCCTT+TGG | + | chr2_4:9881735-9881754 | Msa0314220:CDS | 35.0% |
| GAACTATCCTTATCAGCTTT+AGG | - | chr2_4:9881811-9881830 | None:intergenic | 35.0% | |
| AAGGATAGTTCATCTGAAGA+TGG | + | chr2_4:9881820-9881839 | Msa0314220:CDS | 35.0% | |
| GGTTAATGCAGCAACAAAAA+TGG | - | chr2_4:9881920-9881939 | None:intergenic | 35.0% | |
| ! | TGTTTTGTATTGTCATGGGA+TGG | + | chr2_4:9882022-9882041 | Msa0314220:intron | 35.0% |
| ! | GTTTTGTATTGTCATGGGAT+GGG | + | chr2_4:9882023-9882042 | Msa0314220:intron | 35.0% |
| CGACATACTTGATGAAACTA+AGG | + | chr2_4:9882262-9882281 | Msa0314220:intron | 35.0% | |
| TGAATGGCTAGAATGACATT+TGG | + | chr2_4:9882341-9882360 | Msa0314220:intron | 35.0% | |
| TTATTGTCTTAGGGAGAAGA+CGG | + | chr2_4:9882381-9882400 | Msa0314220:intron | 35.0% | |
| GACTGCATATATAGATAAGG+CGG | - | chr2_4:9882622-9882641 | None:intergenic | 35.0% | |
| ACGAATTAGTTCCTTGGTAT+TGG | + | chr2_4:9882660-9882679 | Msa0314220:intron | 35.0% | |
| AAGCTCTATGATTGGAAACT+AGG | + | chr2_4:9882700-9882719 | Msa0314220:intron | 35.0% | |
| CTATGATTGGAAACTAGGTT+AGG | + | chr2_4:9882705-9882724 | Msa0314220:intron | 35.0% | |
| ATTGGAAACTAGGTTAGGTT+CGG | + | chr2_4:9882710-9882729 | Msa0314220:intron | 35.0% | |
| ! | GGAGAGTAGATGCAATTTTT+CGG | + | chr2_4:9882765-9882784 | Msa0314220:intron | 35.0% |
| !! | TTTTTCGGCAAAATGACTAC+AGG | + | chr2_4:9882780-9882799 | Msa0314220:intron | 35.0% |
| ! | AAGAAGTCCTGATTGTTGTT+TGG | + | chr2_4:9883061-9883080 | Msa0314220:intron | 35.0% |
| GGTAGCAAATAATAACTGTC+AGG | - | chr2_4:9883430-9883449 | None:intergenic | 35.0% | |
| !!! | GGTGATTTTGGGATAATACT+AGG | - | chr2_4:9883826-9883845 | None:intergenic | 35.0% |
| ! | TGTCTATGGATGGTGATTTT+GGG | - | chr2_4:9883837-9883856 | None:intergenic | 35.0% |
| ! | ATGTCTATGGATGGTGATTT+TGG | - | chr2_4:9883838-9883857 | None:intergenic | 35.0% |
| GAGGATTTGGATAATGTCTA+TGG | - | chr2_4:9883851-9883870 | None:intergenic | 35.0% | |
| !!! | ACTGAGTTGTTTTGAGAAGA+CGG | - | chr2_4:9883903-9883922 | None:intergenic | 35.0% |
| !!! | ACCTGGTTTGAGTTTTGAAA+AGG | - | chr2_4:9884028-9884047 | None:intergenic | 35.0% |
| CAACTTAATGTAACCACTTC+TGG | + | chr2_4:9884186-9884205 | Msa0314220:CDS | 35.0% | |
| TGTGTAAACTGTTCCTGTAA+CGG | - | chr2_4:9884253-9884272 | None:intergenic | 35.0% | |
| CAACAAACTAGCTGTATATC+AGG | + | chr2_4:9884275-9884294 | Msa0314220:CDS | 35.0% | |
| ! | GATGAATCTCCTTTAGAAAC+CGG | - | chr2_4:9884366-9884385 | None:intergenic | 35.0% |
| AAGCAAGTCATCATCATCAA+AGG | + | chr2_4:9884401-9884420 | Msa0314220:CDS | 35.0% | |
| ! | TGCTGGTTATTCAAACATGA+AGG | + | chr2_4:9884467-9884486 | Msa0314220:CDS | 35.0% |
| GCTGGTTATTCAAACATGAA+GGG | + | chr2_4:9884468-9884487 | Msa0314220:CDS | 35.0% | |
| ATTCAAACATGAAGGGAATG+TGG | + | chr2_4:9884475-9884494 | Msa0314220:CDS | 35.0% | |
| GACTAAGAGAGAACACTAAG+AGG | + | chr2_4:9879764-9879783 | Msa0314220:intron | 40.0% | |
| GCTTATATAGATAAGGCCCT+TGG | - | chr2_4:9879974-9879993 | None:intergenic | 40.0% | |
| ACGAATTAGCTCCTTGGTAA+TGG | + | chr2_4:9880008-9880027 | Msa0314220:intron | 40.0% | |
| TGATGGGAAACTATCACGTT+AGG | + | chr2_4:9880056-9880075 | Msa0314220:intron | 40.0% | |
| GGAAACTATCACGTTAGGTT+TGG | + | chr2_4:9880061-9880080 | Msa0314220:intron | 40.0% | |
| ATGCATTGGAGATGCTCTAA+AGG | - | chr2_4:9880263-9880282 | None:intergenic | 40.0% | |
| GTCTTTAGTACGTACAGTTC+AGG | + | chr2_4:9880566-9880585 | Msa0314220:intron | 40.0% | |
| GACATTGCCTGACAAAGATT+TGG | - | chr2_4:9880685-9880704 | None:intergenic | 40.0% | |
| ! | TTTGTCAGGCAATGTCACTT+AGG | + | chr2_4:9880689-9880708 | Msa0314220:intron | 40.0% |
| ! | TTGTCAGGCAATGTCACTTA+GGG | + | chr2_4:9880690-9880709 | Msa0314220:intron | 40.0% |
| !! | TTCCTTTTCTTTCTGGTCGA+TGG | + | chr2_4:9880735-9880754 | Msa0314220:intron | 40.0% |
| TTCCATCGACCAGAAAGAAA+AGG | - | chr2_4:9880740-9880759 | None:intergenic | 40.0% | |
| TGAGAGTGGATATTTGACAG+TGG | - | chr2_4:9880938-9880957 | None:intergenic | 40.0% | |
| TGCTATGAGTGTTTGATGCA+AGG | - | chr2_4:9881042-9881061 | None:intergenic | 40.0% | |
| TGAGGTAATGAAGGGACTAA+GGG | - | chr2_4:9881268-9881287 | None:intergenic | 40.0% | |
| TTGAGGTAATGAAGGGACTA+AGG | - | chr2_4:9881269-9881288 | None:intergenic | 40.0% | |
| AGGGTGATTGAGGTAATGAA+GGG | - | chr2_4:9881276-9881295 | None:intergenic | 40.0% | |
| ATTACCTCAATCACCCTCAT+CGG | + | chr2_4:9881279-9881298 | Msa0314220:CDS | 40.0% | |
| CAACCAAATTAACTCACAGC+TGG | + | chr2_4:9881393-9881412 | Msa0314220:intron | 40.0% | |
| TCACCAGCTGTGAGTTAATT+TGG | - | chr2_4:9881399-9881418 | None:intergenic | 40.0% | |
| CAGCTGGTGACAACAAAAAA+CGG | + | chr2_4:9881409-9881428 | Msa0314220:intron | 40.0% | |
| ATACACAATCCCTATGAGTG+TGG | - | chr2_4:9881686-9881705 | None:intergenic | 40.0% | |
| TTAGGCTTAGAGAAGTCCAA+AGG | - | chr2_4:9881754-9881773 | None:intergenic | 40.0% | |
| TTTGGACTTCTCTAAGCCTA+AGG | + | chr2_4:9881753-9881772 | Msa0314220:CDS | 40.0% | |
| TCATCTGAAGATGGTGATCA+AGG | + | chr2_4:9881829-9881848 | Msa0314220:CDS | 40.0% | |
| GAGTCAACTAAAGCTACTTC+TGG | + | chr2_4:9881853-9881872 | Msa0314220:CDS | 40.0% | |
| TGGTCTTCATCAACTGAACA+TGG | - | chr2_4:9881941-9881960 | None:intergenic | 40.0% | |
| GTGAATTACTCTCTCTTTGG+AGG | + | chr2_4:9882191-9882210 | Msa0314220:intron | 40.0% | |
| ATTGCATCTACTCTCCATGT+TGG | - | chr2_4:9882761-9882780 | None:intergenic | 40.0% | |
| GACTTCTTTCCTCTGCTATA+AGG | - | chr2_4:9883049-9883068 | None:intergenic | 40.0% | |
| !! | ATGGAGTTTAATTTGGCCGA+AGG | + | chr2_4:9883192-9883211 | Msa0314220:intron | 40.0% |
| TGTTGGAAGAGTTTCCTTTG+CGG | - | chr2_4:9883224-9883243 | None:intergenic | 40.0% | |
| GGACATAAGAAAGGTAAGCT+AGG | - | chr2_4:9883408-9883427 | None:intergenic | 40.0% | |
| AACTGTCAGGGACATAAGAA+AGG | - | chr2_4:9883417-9883436 | None:intergenic | 40.0% | |
| TGAGGATTCTCATTGGTGAA+AGG | - | chr2_4:9883506-9883525 | None:intergenic | 40.0% | |
| !!! | GAAGGGATTGGCTTTTATTG+AGG | - | chr2_4:9883524-9883543 | None:intergenic | 40.0% |
| TGTCCTTATGTGAGGAATGA+GGG | - | chr2_4:9883548-9883567 | None:intergenic | 40.0% | |
| ! | TTTGGGATAATACTAGGGGT+GGG | - | chr2_4:9883820-9883839 | None:intergenic | 40.0% |
| !!! | TTTTGGGATAATACTAGGGG+TGG | - | chr2_4:9883821-9883840 | None:intergenic | 40.0% |
| TCATCATCAGATTCTAGCAG+TGG | + | chr2_4:9883970-9883989 | Msa0314220:CDS | 40.0% | |
| !! | TTTGAAAAGGCACTGTCTTC+TGG | - | chr2_4:9884015-9884034 | None:intergenic | 40.0% |
| ! | GCCTTTTCAAAACTCAAACC+AGG | + | chr2_4:9884024-9884043 | Msa0314220:CDS | 40.0% |
| TACTTTGTGTCTGTCACTGA+GGG | - | chr2_4:9884061-9884080 | None:intergenic | 40.0% | |
| ! | AGATGAATGAGGAAAGTGTG+TGG | - | chr2_4:9884098-9884117 | None:intergenic | 40.0% |
| GTTCGAGATTGAGATGAATG+AGG | - | chr2_4:9884109-9884128 | None:intergenic | 40.0% | |
| CTTAATGTAACCACTTCTGG+TGG | + | chr2_4:9884189-9884208 | Msa0314220:CDS | 40.0% | |
| AGCCATGTTAGTATGACAAC+TGG | + | chr2_4:9884213-9884232 | Msa0314220:CDS | 40.0% | |
| !! | AGCTGTATATCAGGTTGACA+AGG | + | chr2_4:9884284-9884303 | Msa0314220:CDS | 40.0% |
| !! | GATGACTTGCTTCTATCATC+AGG | - | chr2_4:9884393-9884412 | None:intergenic | 40.0% |
| AGGTGATTGAGCTGAAGTAG+TGG | + | chr2_4:9879711-9879730 | Msa0314220:intron | 45.0% | |
| TGTGCAACAATGTTGAGCCA+AGG | + | chr2_4:9879954-9879973 | Msa0314220:intron | 45.0% | |
| GTGCAACAATGTTGAGCCAA+GGG | + | chr2_4:9879955-9879974 | Msa0314220:intron | 45.0% | |
| ! | TCCTTTGCGGATCGATTCTT+AGG | - | chr2_4:9880408-9880427 | None:intergenic | 45.0% |
| TGTCGGAAGAGTTTCCTTTG+CGG | - | chr2_4:9880421-9880440 | None:intergenic | 45.0% | |
| TGTAAGAGCAACTCCCATGA+AGG | - | chr2_4:9880491-9880510 | None:intergenic | 45.0% | |
| GGGGCTATTGATCTGTATAG+AGG | - | chr2_4:9880771-9880790 | None:intergenic | 45.0% | |
| AGGTGATTGAGCTGAAGTAG+TGG | - | chr2_4:9879711-9879730 | None:intergenic | 45.0% | |
| GAGGGTGATTGAGGTAATGA+AGG | - | chr2_4:9881277-9881296 | None:intergenic | 45.0% | |
| CTGGTGACAACAAAAAACGG+TGG | + | chr2_4:9881412-9881431 | Msa0314220:intron | 45.0% | |
| TCGGTTAATGCCACACTCAT+AGG | + | chr2_4:9881673-9881692 | Msa0314220:intron | 45.0% | |
| CGGTTAATGCCACACTCATA+GGG | + | chr2_4:9881674-9881693 | Msa0314220:intron | 45.0% | |
| TGTATTGTCATGGGATGGGA+TGG | + | chr2_4:9882027-9882046 | Msa0314220:intron | 45.0% | |
| GTATTGTCATGGGATGGGAT+GGG | + | chr2_4:9882028-9882047 | Msa0314220:intron | 45.0% | |
| ! | ATAGATAAGGCGGAGCATCT+TGG | - | chr2_4:9882612-9882631 | None:intergenic | 45.0% |
| !! | AACTTTTTAGCGGTGACAGC+AGG | + | chr2_4:9883147-9883166 | Msa0314220:intron | 45.0% |
| ATGTGAGGAATGAGGGAGAA+GGG | - | chr2_4:9883541-9883560 | None:intergenic | 45.0% | |
| TATGTGAGGAATGAGGGAGA+AGG | - | chr2_4:9883542-9883561 | None:intergenic | 45.0% | |
| TCTCCCTCATTCCTCACATA+AGG | + | chr2_4:9883542-9883561 | Msa0314220:intron | 45.0% | |
| GTGTCCTTATGTGAGGAATG+AGG | - | chr2_4:9883549-9883568 | None:intergenic | 45.0% | |
| !! | AGGTGGTAGTGGAATAGTAG+AGG | - | chr2_4:9883702-9883721 | None:intergenic | 45.0% |
| TCACCAGTTCAATCTCCACA+AGG | + | chr2_4:9883733-9883752 | Msa0314220:CDS | 45.0% | |
| ACTTGGGGATACTGGTACAA+GGG | - | chr2_4:9883791-9883810 | None:intergenic | 45.0% | |
| TTGTACCAGTATCCCCAAGT+GGG | + | chr2_4:9883791-9883810 | Msa0314220:CDS | 45.0% | |
| TTGGGATAATACTAGGGGTG+GGG | - | chr2_4:9883819-9883838 | None:intergenic | 45.0% | |
| TCATCAGATTCTAGCAGTGG+TGG | + | chr2_4:9883973-9883992 | Msa0314220:CDS | 45.0% | |
| CTGAGGGAATTAAGGAAACC+TGG | - | chr2_4:9884045-9884064 | None:intergenic | 45.0% | |
| GTCTGTCACTGAGGGAATTA+AGG | - | chr2_4:9884053-9884072 | None:intergenic | 45.0% | |
| CTACTTTGTGTCTGTCACTG+AGG | - | chr2_4:9884062-9884081 | None:intergenic | 45.0% | |
| !! | TGTTTGAACCGGGTTGGTTA+AGG | - | chr2_4:9884139-9884158 | None:intergenic | 45.0% |
| TCACCAGCTTGTGTTTGAAC+CGG | - | chr2_4:9884150-9884169 | None:intergenic | 45.0% | |
| ! | AAGCTGGTGATGATGCCAAA+CGG | + | chr2_4:9884160-9884179 | Msa0314220:CDS | 45.0% |
| CGCCAGTTGTCATACTAACA+TGG | - | chr2_4:9884218-9884237 | None:intergenic | 45.0% | |
| AAACATGAAGGGAATGTGGC+TGG | + | chr2_4:9884479-9884498 | Msa0314220:CDS | 45.0% | |
| !!! | ATGTGGCTGGCTCTTGTTTT+TGG | + | chr2_4:9884492-9884511 | Msa0314220:CDS | 45.0% |
| !!! | TGTGGCTGGCTCTTGTTTTT+GGG | + | chr2_4:9884493-9884512 | Msa0314220:CDS | 45.0% |
| !! | TTTGGGATGGTTTTGCTTGC+TGG | + | chr2_4:9884510-9884529 | Msa0314220:CDS | 45.0% |
| !!! | GCAGGATTTTCTGGGGCTTT+AGG | + | chr2_4:9879679-9879698 | Msa0314220:five_prime_UTR | 50.0% |
| CTTGCATCTGCTCTCCATGT+TGG | - | chr2_4:9880112-9880131 | None:intergenic | 50.0% | |
| GCCTAAGAATCGATCCGCAA+AGG | + | chr2_4:9880404-9880423 | Msa0314220:intron | 50.0% | |
| ! | GCAGGTTTTTCCTGGGCTTT+AGG | - | chr2_4:9881208-9881227 | None:intergenic | 50.0% |
| ! | GAAGGGACTAAGGGTTTTGC+TGG | - | chr2_4:9881259-9881278 | None:intergenic | 50.0% |
| GAATCCGATGAGGGTGATTG+AGG | - | chr2_4:9881286-9881305 | None:intergenic | 50.0% | |
| ! | GCCTTTTCCCAACTCAAAGC+CGG | + | chr2_4:9881463-9881482 | Msa0314220:CDS | 50.0% |
| !! | TCCGGCTTTGAGTTGGGAAA+AGG | - | chr2_4:9881467-9881486 | None:intergenic | 50.0% |
| !! | GAGGTATCCGGCTTTGAGTT+GGG | - | chr2_4:9881473-9881492 | None:intergenic | 50.0% |
| !! | TGAGGTATCCGGCTTTGAGT+TGG | - | chr2_4:9881474-9881493 | None:intergenic | 50.0% |
| TTTCTGTTGGCGTTCGCCAA+GGG | - | chr2_4:9881500-9881519 | None:intergenic | 50.0% | |
| !! | GAAGGCGCCTAAAGCTGATA+AGG | + | chr2_4:9881801-9881820 | Msa0314220:CDS | 50.0% |
| GGCTTGAGACCTTATAGCAG+AGG | + | chr2_4:9883037-9883056 | Msa0314220:intron | 50.0% | |
| TCCTTTGCGGATCGATCCTT+CGG | - | chr2_4:9883211-9883230 | None:intergenic | 50.0% | |
| AGGAATGAGGGAGAAGGGAT+TGG | - | chr2_4:9883536-9883555 | None:intergenic | 50.0% | |
| AACTGGTGAGAGTTGTGCTG+AGG | - | chr2_4:9883722-9883741 | None:intergenic | 50.0% | |
| ! | GAGCCTTGTGGAGATTGAAC+TGG | - | chr2_4:9883739-9883758 | None:intergenic | 50.0% |
| ACTGTGTTGAAACCTGGTGC+TGG | - | chr2_4:9883766-9883785 | None:intergenic | 50.0% | |
| AGGGGAACTGTGTTGAAACC+TGG | - | chr2_4:9883772-9883791 | None:intergenic | 50.0% | |
| CTTGGGGATACTGGTACAAG+GGG | - | chr2_4:9883790-9883809 | None:intergenic | 50.0% | |
| CACTTGGGGATACTGGTACA+AGG | - | chr2_4:9883792-9883811 | None:intergenic | 50.0% | |
| CTTGTACCAGTATCCCCAAG+TGG | + | chr2_4:9883790-9883809 | Msa0314220:CDS | 50.0% | |
| TGTACCAGTATCCCCAAGTG+GGG | + | chr2_4:9883792-9883811 | Msa0314220:CDS | 50.0% | |
| TGGGATAATACTAGGGGTGG+GGG | - | chr2_4:9883818-9883837 | None:intergenic | 50.0% | |
| CTTCGACACCTTAACCAACC+CGG | + | chr2_4:9884128-9884147 | Msa0314220:CDS | 50.0% | |
| AGCTTGTGTTTGAACCGGGT+TGG | - | chr2_4:9884145-9884164 | None:intergenic | 50.0% | |
| AACCCGGTTCAAACACAAGC+TGG | + | chr2_4:9884144-9884163 | Msa0314220:CDS | 50.0% | |
| CACCAGCTTGTGTTTGAACC+GGG | - | chr2_4:9884149-9884168 | None:intergenic | 50.0% | |
| AACATGGCTACCACCAGAAG+TGG | - | chr2_4:9884202-9884221 | None:intergenic | 50.0% | |
| GCTGTTAACGCAACCGTTAC+AGG | + | chr2_4:9884237-9884256 | Msa0314220:CDS | 50.0% | |
| ! | GCAGGAAGCACAAGATCAAG+AGG | - | chr2_4:9884318-9884337 | None:intergenic | 50.0% |
| ! | TCTCCTTTAGAAACCGGTGC+AGG | - | chr2_4:9884360-9884379 | None:intergenic | 50.0% |
| !!! | GCTGGCTCTTGTTTTTGGGA+TGG | + | chr2_4:9884497-9884516 | Msa0314220:CDS | 50.0% |
| ! | TGGCAGGGGCAGGATTTTCT+GGG | + | chr2_4:9879671-9879690 | Msa0314220:five_prime_UTR | 55.0% |
| !!! | GGTTTTGCTGGTGCTGTTGC+AGG | - | chr2_4:9881247-9881266 | None:intergenic | 55.0% |
| CCGGACGAAGAATCCGATGA+GGG | - | chr2_4:9881295-9881314 | None:intergenic | 55.0% | |
| CCCTCATCGGATTCTTCGTC+CGG | + | chr2_4:9881292-9881311 | Msa0314220:CDS | 55.0% | |
| ACCGGACGAAGAATCCGATG+AGG | - | chr2_4:9881296-9881315 | None:intergenic | 55.0% | |
| GCCATCCTTGCACCTGATGA+CGG | + | chr2_4:9881439-9881458 | Msa0314220:intron | 55.0% | |
| ACCGTCATCAGGTGCAAGGA+TGG | - | chr2_4:9881443-9881462 | None:intergenic | 55.0% | |
| !! | TGGGAAAAGGCACCGTCATC+AGG | - | chr2_4:9881454-9881473 | None:intergenic | 55.0% |
| ! | GCCAAGGGAGTTGAGGTATC+CGG | - | chr2_4:9881485-9881504 | None:intergenic | 55.0% |
| CTTTCTGTTGGCGTTCGCCA+AGG | - | chr2_4:9881501-9881520 | None:intergenic | 55.0% | |
| ! | TAGCAACCCTGTGCTGACAC+TGG | + | chr2_4:9881579-9881598 | Msa0314220:CDS | 55.0% |
| CACTAGCCAGTGTCAGCACA+GGG | - | chr2_4:9881588-9881607 | None:intergenic | 55.0% | |
| TCACTAGCCAGTGTCAGCAC+AGG | - | chr2_4:9881589-9881608 | None:intergenic | 55.0% | |
| CTGGCTAGTGATAGCCCTTC+TGG | + | chr2_4:9881598-9881617 | Msa0314220:CDS | 55.0% | |
| ! | TCTAGCTCCTGCTCCTGCTA+CGG | + | chr2_4:9881777-9881796 | Msa0314220:CDS | 55.0% |
| GAGTTGTGCTGAGGTGGTAG+TGG | - | chr2_4:9883713-9883732 | None:intergenic | 55.0% | |
| TGGTGAGAGTTGTGCTGAGG+TGG | - | chr2_4:9883719-9883738 | None:intergenic | 55.0% | |
| ! | GCAAGTGCAGGAGCTTTAGC+AGG | - | chr2_4:9884336-9884355 | None:intergenic | 55.0% |
| !! | GCACCTGCACCGGTTTCTAA+AGG | + | chr2_4:9884354-9884373 | Msa0314220:CDS | 55.0% |
| GACTTGCCTGCAGAAGCTTC+TGG | + | chr2_4:9884444-9884463 | Msa0314220:CDS | 55.0% | |
| ! | GTGGCAGGGGCAGGATTTTC+TGG | + | chr2_4:9879670-9879689 | Msa0314220:five_prime_UTR | 60.0% |
| ! | GGCAGGGGCAGGATTTTCTG+GGG | + | chr2_4:9879672-9879691 | Msa0314220:five_prime_UTR | 60.0% |
| !! | TGGGCTTTAGGTGCTGCAGC+AGG | - | chr2_4:9881196-9881215 | None:intergenic | 60.0% |
| TGCTGCAGCACCTAAAGCCC+AGG | + | chr2_4:9881195-9881214 | Msa0314220:CDS | 60.0% | |
| ! | GGCAGGGGCAGGTTTTTCCT+GGG | - | chr2_4:9881215-9881234 | None:intergenic | 60.0% |
| ! | TGGCAGGGGCAGGTTTTTCC+TGG | - | chr2_4:9881216-9881235 | None:intergenic | 60.0% |
| TTGCAGGAGCTGGTGTGGCA+GGG | - | chr2_4:9881231-9881250 | None:intergenic | 60.0% | |
| TGCTGTTGCAGGAGCTGGTG+TGG | - | chr2_4:9881236-9881255 | None:intergenic | 60.0% | |
| ! | AGGCACCGTCATCAGGTGCA+AGG | - | chr2_4:9881447-9881466 | None:intergenic | 60.0% |
| GCCGGATACCTCAACTCCCT+TGG | + | chr2_4:9881481-9881500 | Msa0314220:CDS | 60.0% | |
| GGAGCAGGAGCTAGAGCCTT+AGG | - | chr2_4:9881772-9881791 | None:intergenic | 60.0% | |
| GCCGAAGGATCGATCCGCAA+AGG | + | chr2_4:9883207-9883226 | Msa0314220:intron | 60.0% | |
| !! | GGTGCTGGTGTAGAGCCTTG+TGG | - | chr2_4:9883751-9883770 | None:intergenic | 60.0% |
| CAAGGCTCTACACCAGCACC+AGG | + | chr2_4:9883751-9883770 | Msa0314220:CDS | 60.0% | |
| TCCTGCACTTGCACCTGCAC+CGG | + | chr2_4:9884344-9884363 | Msa0314220:CDS | 60.0% | |
| CCAGCACCAGAAGCTTCTGC+AGG | - | chr2_4:9884453-9884472 | None:intergenic | 60.0% | |
| CCTGCAGAAGCTTCTGGTGC+TGG | + | chr2_4:9884450-9884469 | Msa0314220:CDS | 60.0% | |
| !! | GGGGCTTTAGGTGCTGCAGC+AGG | + | chr2_4:9879691-9879710 | Msa0314220:five_prime_UTR | 65.0% |
| TGCAGGAGCTGGTGTGGCAG+GGG | - | chr2_4:9881230-9881249 | None:intergenic | 65.0% | |
| GTTGCAGGAGCTGGTGTGGC+AGG | - | chr2_4:9881232-9881251 | None:intergenic | 65.0% | |
| !! | GCTGGTGCTGTTGCAGGAGC+TGG | - | chr2_4:9881241-9881260 | None:intergenic | 65.0% |
| GGCGTTCGCCAAGGGAGTTG+AGG | - | chr2_4:9881492-9881511 | None:intergenic | 65.0% | |
| TCCTGCTCCTGCTACGGCGA+AGG | + | chr2_4:9881783-9881802 | Msa0314220:CDS | 65.0% | |
| TTAGGCGCCTTCGCCGTAGC+AGG | - | chr2_4:9881793-9881812 | None:intergenic | 65.0% | |
| ACCGGTGCAGGTGCAAGTGC+AGG | - | chr2_4:9884348-9884367 | None:intergenic | 65.0% | |
| GCCTTCGCCGTAGCAGGAGC+AGG | - | chr2_4:9881787-9881806 | None:intergenic | 70.0% | |
| GGGGCCCCACTTGGGGATAC+TGG | - | chr2_4:9883799-9883818 | None:intergenic | 70.0% | |
| TAGGGGTGGGGGCCCCACTT+GGG | - | chr2_4:9883807-9883826 | None:intergenic | 70.0% | |
| GGAGCTGGTGTGGCAGGGGC+AGG | - | chr2_4:9881226-9881245 | None:intergenic | 75.0% | |
| AGGGGTGGGGGCCCCACTTG+GGG | - | chr2_4:9883806-9883825 | None:intergenic | 75.0% | |
| CTAGGGGTGGGGGCCCCACT+TGG | - | chr2_4:9883808-9883827 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 9879662 | 9884545 | 9879662 | ID=Msa0314220;Name=Msa0314220 |
| chr2_4 | mRNA | 9879662 | 9884545 | 9879662 | ID=Msa0314220-mRNA-1;Parent=Msa0314220;Name=Msa0314220-mRNA-1;_AED=0.08;_eAED=0.08;_QI=68|0|0|0.8|0.25|0.2|5|0|509 |
| chr2_4 | exon | 9879662 | 9879712 | 9879662 | ID=Msa0314220-mRNA-1:exon:3781;Parent=Msa0314220-mRNA-1 |
| chr2_4 | exon | 9881101 | 9881337 | 9881101 | ID=Msa0314220-mRNA-1:exon:3782;Parent=Msa0314220-mRNA-1 |
| chr2_4 | exon | 9881440 | 9881675 | 9881440 | ID=Msa0314220-mRNA-1:exon:3783;Parent=Msa0314220-mRNA-1 |
| chr2_4 | exon | 9881715 | 9881924 | 9881715 | ID=Msa0314220-mRNA-1:exon:3784;Parent=Msa0314220-mRNA-1 |
| chr2_4 | exon | 9883685 | 9884545 | 9883685 | ID=Msa0314220-mRNA-1:exon:3785;Parent=Msa0314220-mRNA-1 |
| chr2_4 | five_prime_UTR | 9879662 | 9879712 | 9879662 | ID=Msa0314220-mRNA-1:five_prime_utr;Parent=Msa0314220-mRNA-1 |
| chr2_4 | five_prime_UTR | 9881101 | 9881117 | 9881101 | ID=Msa0314220-mRNA-1:five_prime_utr;Parent=Msa0314220-mRNA-1 |
| chr2_4 | CDS | 9881118 | 9881337 | 9881118 | ID=Msa0314220-mRNA-1:cds;Parent=Msa0314220-mRNA-1 |
| chr2_4 | CDS | 9881440 | 9881675 | 9881440 | ID=Msa0314220-mRNA-1:cds;Parent=Msa0314220-mRNA-1 |
| chr2_4 | CDS | 9881715 | 9881924 | 9881715 | ID=Msa0314220-mRNA-1:cds;Parent=Msa0314220-mRNA-1 |
| chr2_4 | CDS | 9883685 | 9884545 | 9883685 | ID=Msa0314220-mRNA-1:cds;Parent=Msa0314220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
