Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213150 | XP_013464351.2 | 96.330 | 218 | 7 | 1 | 1 | 217 | 1 | 218 | 1.74e-151 | 429 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213150 | sp|P49332|GSTXC_TOBAC | 68.421 | 209 | 64 | 2 | 3 | 210 | 4 | 211 | 3.11e-102 | 297 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213150 | A0A072V9X8 | 96.330 | 218 | 7 | 1 | 1 | 217 | 1 | 218 | 9.56e-152 | 429 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024650 | Msa0213150 | 0.801783 | 7.652109e-49 | -8.615850e-47 |
| Msa0120450 | Msa0213150 | 0.802276 | 6.058155e-49 | -8.615850e-47 |
| Msa0213150 | Msa0253450 | 0.874793 | 5.114971e-68 | -8.615850e-47 |
| Msa0213150 | Msa0281190 | 0.804905 | 1.725887e-49 | -8.615850e-47 |
| Msa0213150 | Msa0292250 | 0.857810 | 1.266600e-62 | -8.615850e-47 |
| Msa0213150 | Msa0299030 | 0.801802 | 7.583467e-49 | -8.615850e-47 |
| Msa0213150 | Msa0386910 | 0.809165 | 2.165765e-50 | -8.615850e-47 |
| Msa0213150 | Msa0427560 | 0.800255 | 1.570236e-48 | -8.615850e-47 |
| Msa0213150 | Msa0565180 | 0.806868 | 6.673914e-50 | -8.615850e-47 |
| Msa0213150 | Msa0567330 | 0.800195 | 1.614812e-48 | -8.615850e-47 |
| Msa0213150 | Msa0576320 | 0.803424 | 3.510137e-49 | -8.615850e-47 |
| Msa0213150 | Msa0873880 | 0.828608 | 8.178425e-55 | -8.615850e-47 |
| Msa0213150 | Msa0873940 | 0.819572 | 1.082564e-52 | -8.615850e-47 |
| Msa0213150 | Msa0896950 | 0.802516 | 5.407419e-49 | -8.615850e-47 |
| Msa0213150 | Msa0906680 | 0.820965 | 5.188754e-53 | -8.615850e-47 |
| Msa0213150 | Msa0975950 | 0.805893 | 1.071090e-49 | -8.615850e-47 |
| Msa0213150 | Msa1108560 | 0.814497 | 1.495221e-51 | -8.615850e-47 |
| Msa0213150 | Msa1157210 | 0.817011 | 4.113206e-52 | -8.615850e-47 |
| Msa0213150 | Msa1240490 | 0.811300 | 7.500084e-51 | -8.615850e-47 |
| Msa0213150 | Msa1323080 | 0.800958 | 1.128706e-48 | -8.615850e-47 |
| Msa0213150 | Msa1364190 | 0.807740 | 4.361332e-50 | -8.615850e-47 |
| Msa0213150 | Msa1368420 | 0.813510 | 2.468003e-51 | -8.615850e-47 |
| Msa0213150 | Msa1383220 | 0.816867 | 4.431898e-52 | -8.615850e-47 |
| Msa0213150 | Msa1437780 | 0.801510 | 8.703779e-49 | -8.615850e-47 |
| Msa0213150 | Msa1455360 | 0.800452 | 1.431500e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213150 | MtrunA17_Chr2g0312791 | 96.330 | 218 | 7 | 1 | 1 | 217 | 1 | 218 | 1.84e-155 | 429 |
| Msa0213150 | MtrunA17_Chr2g0312771 | 71.889 | 217 | 60 | 1 | 1 | 217 | 1 | 216 | 2.95e-119 | 338 |
| Msa0213150 | MtrunA17_Chr2g0312751 | 69.124 | 217 | 66 | 1 | 1 | 217 | 1 | 216 | 9.59e-116 | 329 |
| Msa0213150 | MtrunA17_Chr2g0312781 | 67.907 | 215 | 68 | 1 | 1 | 215 | 18 | 231 | 1.18e-111 | 319 |
| Msa0213150 | MtrunA17_Chr2g0312811 | 68.950 | 219 | 65 | 2 | 1 | 217 | 1 | 218 | 1.37e-111 | 318 |
| Msa0213150 | MtrunA17_Chr2g0312731 | 64.815 | 216 | 75 | 1 | 1 | 216 | 1 | 215 | 6.62e-107 | 306 |
| Msa0213150 | MtrunA17_Chr2g0312681 | 58.525 | 217 | 89 | 1 | 1 | 217 | 1 | 216 | 1.99e-94 | 275 |
| Msa0213150 | MtrunA17_Chr2g0312691 | 59.908 | 217 | 86 | 1 | 1 | 217 | 1 | 216 | 1.59e-93 | 273 |
| Msa0213150 | MtrunA17_Chr3g0107731 | 62.927 | 205 | 75 | 1 | 5 | 209 | 10 | 213 | 3.19e-93 | 272 |
| Msa0213150 | MtrunA17_Chr8g0357211 | 60.377 | 212 | 83 | 1 | 1 | 212 | 1 | 211 | 7.06e-91 | 266 |
| Msa0213150 | MtrunA17_Chr8g0357241 | 58.716 | 218 | 89 | 1 | 1 | 218 | 1 | 217 | 1.30e-90 | 265 |
| Msa0213150 | MtrunA17_Chr3g0107741 | 61.836 | 207 | 78 | 1 | 3 | 209 | 8 | 213 | 6.45e-90 | 263 |
| Msa0213150 | MtrunA17_Chr2g0312721 | 58.716 | 218 | 88 | 2 | 1 | 218 | 1 | 216 | 3.27e-87 | 256 |
| Msa0213150 | MtrunA17_Chr2g0312711 | 56.221 | 217 | 93 | 1 | 1 | 217 | 1 | 215 | 3.18e-86 | 254 |
| Msa0213150 | MtrunA17_Chr4g0069471 | 60.326 | 184 | 69 | 3 | 1 | 183 | 22 | 202 | 3.17e-75 | 226 |
| Msa0213150 | MtrunA17_Chr5g0433801 | 48.095 | 210 | 106 | 3 | 2 | 210 | 4 | 211 | 1.91e-66 | 204 |
| Msa0213150 | MtrunA17_Chr1g0196661 | 42.661 | 218 | 119 | 4 | 4 | 217 | 3 | 218 | 9.86e-53 | 169 |
| Msa0213150 | MtrunA17_Chr4g0029341 | 42.081 | 221 | 120 | 5 | 1 | 216 | 1 | 218 | 2.44e-51 | 165 |
| Msa0213150 | MtrunA17_Chr1g0196691 | 40.183 | 219 | 124 | 5 | 4 | 217 | 28 | 244 | 1.49e-49 | 162 |
| Msa0213150 | MtrunA17_Chr8g0379581 | 39.269 | 219 | 129 | 3 | 2 | 218 | 3 | 219 | 4.18e-49 | 160 |
| Msa0213150 | MtrunA17_Chr7g0240681 | 40.952 | 210 | 119 | 4 | 3 | 209 | 6 | 213 | 2.48e-48 | 158 |
| Msa0213150 | MtrunA17_Chr5g0417011 | 37.264 | 212 | 125 | 3 | 2 | 206 | 5 | 215 | 4.65e-48 | 157 |
| Msa0213150 | MtrunA17_Chr5g0415411 | 40.278 | 216 | 121 | 3 | 2 | 209 | 3 | 218 | 5.07e-48 | 157 |
| Msa0213150 | MtrunA17_Chr1g0196721 | 42.584 | 209 | 114 | 4 | 5 | 209 | 3 | 209 | 2.02e-46 | 153 |
| Msa0213150 | MtrunA17_Chr7g0240641 | 40.476 | 210 | 121 | 3 | 3 | 210 | 6 | 213 | 3.31e-46 | 152 |
| Msa0213150 | MtrunA17_Chr3g0132581 | 42.308 | 208 | 116 | 4 | 3 | 208 | 4 | 209 | 7.18e-46 | 151 |
| Msa0213150 | MtrunA17_Chr7g0240691 | 40.758 | 211 | 118 | 5 | 3 | 209 | 36 | 243 | 8.72e-46 | 152 |
| Msa0213150 | MtrunA17_Chr7g0240631 | 39.713 | 209 | 122 | 3 | 3 | 209 | 6 | 212 | 1.83e-45 | 150 |
| Msa0213150 | MtrunA17_Chr4g0008781 | 39.171 | 217 | 126 | 4 | 3 | 216 | 7 | 220 | 1.30e-44 | 148 |
| Msa0213150 | MtrunA17_Chr1g0196711 | 41.743 | 218 | 121 | 5 | 4 | 217 | 3 | 218 | 1.95e-44 | 148 |
| Msa0213150 | MtrunA17_Chr8g0379561 | 41.000 | 200 | 114 | 3 | 4 | 201 | 6 | 203 | 2.44e-44 | 147 |
| Msa0213150 | MtrunA17_Chr7g0240581 | 40.796 | 201 | 115 | 3 | 3 | 201 | 6 | 204 | 2.17e-43 | 145 |
| Msa0213150 | MtrunA17_Chr7g0240561 | 39.713 | 209 | 122 | 3 | 3 | 209 | 6 | 212 | 2.25e-43 | 145 |
| Msa0213150 | MtrunA17_Chr4g0008791 | 38.942 | 208 | 123 | 3 | 4 | 209 | 7 | 212 | 7.33e-43 | 144 |
| Msa0213150 | MtrunA17_Chr6g0483141 | 41.624 | 197 | 109 | 4 | 18 | 211 | 17 | 210 | 7.81e-43 | 144 |
| Msa0213150 | MtrunA17_Chr1g0212301 | 41.232 | 211 | 116 | 6 | 1 | 206 | 1 | 208 | 1.49e-42 | 143 |
| Msa0213150 | MtrunA17_Chr7g0240531 | 41.627 | 209 | 118 | 4 | 3 | 209 | 6 | 212 | 6.72e-42 | 141 |
| Msa0213150 | MtrunA17_Chr7g0240541 | 41.148 | 209 | 119 | 4 | 3 | 209 | 6 | 212 | 1.23e-41 | 140 |
| Msa0213150 | MtrunA17_Chr7g0240511 | 40.991 | 222 | 112 | 5 | 3 | 217 | 6 | 215 | 2.83e-41 | 139 |
| Msa0213150 | MtrunA17_Chr1g0196771 | 38.073 | 218 | 126 | 6 | 3 | 215 | 2 | 215 | 5.11e-41 | 139 |
| Msa0213150 | MtrunA17_Chr7g0240671 | 38.647 | 207 | 123 | 4 | 1 | 207 | 1 | 203 | 5.36e-41 | 139 |
| Msa0213150 | MtrunA17_Chr7g0240551 | 41.148 | 209 | 119 | 4 | 3 | 209 | 6 | 212 | 1.53e-40 | 138 |
| Msa0213150 | MtrunA17_Chr8g0363751 | 38.498 | 213 | 121 | 4 | 3 | 206 | 4 | 215 | 2.82e-40 | 137 |
| Msa0213150 | MtrunA17_Chr7g0240611 | 38.756 | 209 | 122 | 6 | 3 | 210 | 6 | 209 | 4.38e-40 | 136 |
| Msa0213150 | MtrunA17_Chr7g0240521 | 41.294 | 201 | 114 | 3 | 3 | 201 | 13 | 211 | 1.99e-36 | 127 |
| Msa0213150 | MtrunA17_Chr7g0240661 | 37.799 | 209 | 126 | 4 | 1 | 209 | 4 | 208 | 2.45e-36 | 127 |
| Msa0213150 | MtrunA17_Chr7g0240651 | 38.278 | 209 | 121 | 5 | 3 | 209 | 6 | 208 | 7.39e-36 | 125 |
| Msa0213150 | MtrunA17_Chr8g0391631 | 42.949 | 156 | 81 | 3 | 4 | 152 | 21 | 175 | 2.27e-34 | 120 |
| Msa0213150 | MtrunA17_Chr2g0313561 | 60.274 | 73 | 29 | 0 | 47 | 119 | 1 | 73 | 1.28e-29 | 105 |
| Msa0213150 | MtrunA17_Chr4g0076691 | 30.588 | 170 | 102 | 4 | 4 | 160 | 15 | 181 | 2.31e-13 | 66.6 |
| Msa0213150 | MtrunA17_Chr4g0076681 | 29.240 | 171 | 105 | 5 | 3 | 160 | 14 | 181 | 4.45e-12 | 63.2 |
| Msa0213150 | MtrunA17_Chr1g0181861 | 29.897 | 194 | 116 | 9 | 14 | 199 | 37 | 218 | 2.38e-11 | 61.2 |
| Msa0213150 | MtrunA17_Chr7g0263221 | 29.064 | 203 | 130 | 9 | 11 | 208 | 33 | 226 | 4.22e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0213150 | AT1G78380.1 | 63.134 | 217 | 79 | 1 | 1 | 217 | 1 | 216 | 2.17e-100 | 290 |
| Msa0213150 | AT1G17180.1 | 61.290 | 217 | 83 | 1 | 1 | 217 | 1 | 216 | 7.90e-99 | 286 |
| Msa0213150 | AT1G78340.1 | 61.722 | 209 | 79 | 1 | 1 | 209 | 1 | 208 | 6.52e-96 | 279 |
| Msa0213150 | AT1G78370.1 | 60.000 | 215 | 85 | 1 | 1 | 215 | 1 | 214 | 5.35e-94 | 274 |
| Msa0213150 | AT1G17170.1 | 60.829 | 217 | 83 | 2 | 1 | 217 | 1 | 215 | 1.53e-93 | 273 |
| Msa0213150 | AT1G78360.1 | 61.187 | 219 | 82 | 3 | 1 | 218 | 1 | 217 | 4.90e-93 | 271 |
| Msa0213150 | AT1G78320.1 | 58.605 | 215 | 88 | 1 | 1 | 215 | 1 | 214 | 3.09e-91 | 267 |
| Msa0213150 | AT1G53680.1 | 57.488 | 207 | 87 | 1 | 3 | 208 | 6 | 212 | 8.83e-87 | 256 |
| Msa0213150 | AT1G17190.1 | 53.488 | 215 | 99 | 1 | 3 | 217 | 4 | 217 | 2.31e-82 | 244 |
| Msa0213150 | AT3G43800.1 | 51.152 | 217 | 101 | 4 | 3 | 215 | 4 | 219 | 5.35e-77 | 231 |
| Msa0213150 | AT1G78320.2 | 50.233 | 215 | 79 | 2 | 1 | 215 | 1 | 187 | 1.33e-69 | 211 |
| Msa0213150 | AT2G29420.1 | 43.836 | 219 | 119 | 4 | 2 | 218 | 7 | 223 | 1.37e-55 | 177 |
| Msa0213150 | AT3G09270.1 | 42.512 | 207 | 115 | 3 | 3 | 206 | 5 | 210 | 4.52e-50 | 162 |
| Msa0213150 | AT1G10360.1 | 42.326 | 215 | 117 | 3 | 2 | 209 | 3 | 217 | 6.46e-50 | 162 |
| Msa0213150 | AT1G59700.1 | 41.743 | 218 | 119 | 4 | 3 | 212 | 5 | 222 | 8.98e-47 | 154 |
| Msa0213150 | AT2G29490.1 | 39.336 | 211 | 119 | 6 | 3 | 208 | 6 | 212 | 3.94e-46 | 152 |
| Msa0213150 | AT1G10370.1 | 40.930 | 215 | 120 | 3 | 2 | 209 | 3 | 217 | 5.93e-46 | 152 |
| Msa0213150 | AT2G29480.1 | 39.336 | 211 | 119 | 6 | 3 | 208 | 6 | 212 | 1.50e-44 | 149 |
| Msa0213150 | AT1G27130.1 | 38.140 | 215 | 125 | 3 | 3 | 209 | 5 | 219 | 5.15e-44 | 147 |
| Msa0213150 | AT2G29440.1 | 38.182 | 220 | 127 | 6 | 3 | 217 | 5 | 220 | 7.73e-44 | 147 |
| Msa0213150 | AT1G74590.1 | 37.500 | 200 | 118 | 3 | 3 | 196 | 6 | 204 | 2.23e-43 | 145 |
| Msa0213150 | AT2G29450.1 | 38.208 | 212 | 125 | 4 | 3 | 210 | 5 | 214 | 1.69e-42 | 143 |
| Msa0213150 | AT2G29460.1 | 37.273 | 220 | 129 | 6 | 3 | 217 | 6 | 221 | 1.84e-42 | 143 |
| Msa0213150 | AT1G59670.1 | 39.908 | 218 | 123 | 4 | 3 | 212 | 5 | 222 | 3.05e-42 | 143 |
| Msa0213150 | AT1G27140.1 | 37.327 | 217 | 127 | 3 | 3 | 210 | 5 | 221 | 6.50e-42 | 142 |
| Msa0213150 | AT1G69930.1 | 38.389 | 211 | 124 | 3 | 5 | 209 | 13 | 223 | 7.35e-42 | 142 |
| Msa0213150 | AT5G62480.1 | 37.387 | 222 | 124 | 5 | 1 | 210 | 5 | 223 | 1.67e-41 | 141 |
| Msa0213150 | AT2G29470.1 | 36.530 | 219 | 129 | 7 | 5 | 217 | 8 | 222 | 9.08e-41 | 139 |
| Msa0213150 | AT1G69920.1 | 34.389 | 221 | 134 | 4 | 5 | 217 | 35 | 252 | 1.20e-35 | 126 |
| Msa0213150 | AT5G62480.2 | 30.180 | 222 | 114 | 6 | 1 | 210 | 5 | 197 | 1.15e-23 | 94.4 |
| Msa0213150 | AT5G62480.3 | 30.455 | 220 | 111 | 6 | 3 | 210 | 7 | 196 | 1.33e-23 | 94.4 |
Find 57 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTACTTAATGCAATTTCTTT+AGG | 0.154698 | 2_1:+55757448 | None:intergenic |
| CTGGGAGACAAGGCTTATTT+TGG | 0.162898 | 2_1:-55757669 | Msa0213150:CDS |
| TGAGAGCACAAGCTAGATTT+TGG | 0.184304 | 2_1:-55758471 | Msa0213150:CDS |
| TACTTAATGCAATTTCTTTA+GGG | 0.241317 | 2_1:+55757449 | None:intergenic |
| CATATCTATGAATTCCTTCT+TGG | 0.269924 | 2_1:+55757713 | None:intergenic |
| TTTGAAACATATGAGAAGTT+TGG | 0.284132 | 2_1:-55757594 | Msa0213150:CDS |
| ATTACAAGTGACTCACAAAT+AGG | 0.297067 | 2_1:+55758556 | None:intergenic |
| GGTTTCTGGATAAGTCCTTA+TGG | 0.328976 | 2_1:-55758718 | Msa0213150:CDS |
| AGTTCATTGAATGGGCTAAT+AGG | 0.359818 | 2_1:-55757542 | Msa0213150:CDS |
| CATAGATATGCTCAAATTGT+TGG | 0.364566 | 2_1:-55757700 | Msa0213150:CDS |
| AAGCTGGAAGGAAAGTTTAT+AGG | 0.375912 | 2_1:-55757764 | Msa0213150:CDS |
| AAGAATAGCCCTTGCTGAAA+AGG | 0.396907 | 2_1:-55758686 | Msa0213150:CDS |
| TTGCCATTGTGGATTAGAAC+CGG | 0.405758 | 2_1:+55758580 | None:intergenic |
| CACAAATAGGTTTGCCATTG+TGG | 0.406278 | 2_1:+55758569 | None:intergenic |
| ATAGAGATGCAAGGGAGAAT+TGG | 0.406692 | 2_1:-55758642 | Msa0213150:CDS |
| ATTAGCCCATTCAATGAACT+TGG | 0.407359 | 2_1:+55757545 | None:intergenic |
| TCGTAGACCTTATGCTGGTT+AGG | 0.419263 | 2_1:+55757486 | None:intergenic |
| TTGAGTATATTGATGAGGTT+TGG | 0.428745 | 2_1:-55758531 | Msa0213150:CDS |
| AAAATCTAGCTTGTGCTCTC+AGG | 0.436530 | 2_1:+55758473 | None:intergenic |
| TGGAGGAGACAGACTTGGTT+TGG | 0.440850 | 2_1:-55757649 | Msa0213150:CDS |
| GGCACTCAATCTCTATATTG+AGG | 0.449276 | 2_1:+55757568 | None:intergenic |
| GTTTCAAACCAACTGTAGAA+TGG | 0.455904 | 2_1:+55757609 | None:intergenic |
| TTTCAAACCAACTGTAGAAT+GGG | 0.460044 | 2_1:+55757610 | None:intergenic |
| ATTCTTGCTCTCATTCCATA+AGG | 0.463260 | 2_1:+55758703 | None:intergenic |
| GGCTGACTATGTTGATAAAA+CGG | 0.464640 | 2_1:-55758449 | Msa0213150:intron |
| CAAATTGTTGGAGAAACAGC+TGG | 0.465628 | 2_1:-55757688 | Msa0213150:CDS |
| CCCTAGTCCCATTCTACAGT+TGG | 0.473896 | 2_1:-55757617 | Msa0213150:CDS |
| GTGCCCCAAGTTCATTGAAT+GGG | 0.489598 | 2_1:-55757550 | Msa0213150:CDS |
| GTCTCTTCCTAACCAGCATA+AGG | 0.491160 | 2_1:-55757493 | Msa0213150:CDS |
| AGAATAGCCCTTGCTGAAAA+GGG | 0.508196 | 2_1:-55758685 | Msa0213150:CDS |
| AGTGCCCCAAGTTCATTGAA+TGG | 0.509213 | 2_1:-55757551 | Msa0213150:CDS |
| GGGTTCATTTGTAGAAGATA+AGG | 0.510488 | 2_1:+55758619 | None:intergenic |
| TTAGCCCATTCAATGAACTT+GGG | 0.515536 | 2_1:+55757546 | None:intergenic |
| AGAACAAGAAGCTGCCAAGA+AGG | 0.534444 | 2_1:-55757727 | Msa0213150:CDS |
| TGTCAATAGATATATGAAGC+TGG | 0.543339 | 2_1:-55757780 | Msa0213150:intron |
| GTATATTGATGAGGTTTGGA+AGG | 0.548215 | 2_1:-55758527 | Msa0213150:CDS |
| GTTCATAGATAGAGATGCAA+GGG | 0.548817 | 2_1:-55758650 | Msa0213150:CDS |
| TGCCATTGTGGATTAGAACC+GGG | 0.551246 | 2_1:+55758581 | None:intergenic |
| CTAGCTTGTGCTCTCAGGTA+GGG | 0.551544 | 2_1:+55758478 | None:intergenic |
| CTACCAAGTCATGGCTGATG+AGG | 0.563594 | 2_1:-55758752 | None:intergenic |
| CCAAGTCATGGCTGATGAGG+TGG | 0.571685 | 2_1:-55758749 | None:intergenic |
| TCTAGCTTGTGCTCTCAGGT+AGG | 0.573698 | 2_1:+55758477 | None:intergenic |
| TAGCCCATTCAATGAACTTG+GGG | 0.580169 | 2_1:+55757547 | None:intergenic |
| CCCGGTTCACAAGAAAATCC+CGG | 0.589293 | 2_1:-55758599 | Msa0213150:CDS |
| GGAGAAACAGCTGGGAGACA+AGG | 0.589733 | 2_1:-55757679 | Msa0213150:CDS |
| AATAGATATATGAAGCTGGA+AGG | 0.589985 | 2_1:-55757776 | Msa0213150:intron |
| CCAACTGTAGAATGGGACTA+GGG | 0.601552 | 2_1:+55757617 | None:intergenic |
| ATGCTGGTTAGGAAGAGACT+TGG | 0.605348 | 2_1:+55757497 | None:intergenic |
| GCTCTCAGGTAGGGATCAGA+AGG | 0.607625 | 2_1:+55758487 | None:intergenic |
| AGTTCATAGATAGAGATGCA+AGG | 0.614971 | 2_1:-55758651 | Msa0213150:CDS |
| ACCAACTGTAGAATGGGACT+AGG | 0.615269 | 2_1:+55757616 | None:intergenic |
| TGAACTCGTAGACCTTATGC+TGG | 0.626524 | 2_1:+55757481 | None:intergenic |
| AAATTGTTGGAGAAACAGCT+GGG | 0.647590 | 2_1:-55757687 | Msa0213150:CDS |
| TTATCTTCTACAAATGAACC+CGG | 0.663975 | 2_1:-55758617 | Msa0213150:CDS |
| TAGGGATCAGAAGGCAACAA+CGG | 0.667696 | 2_1:+55758496 | None:intergenic |
| AATTGTTGAGTATATTGATG+AGG | 0.670411 | 2_1:-55758536 | Msa0213150:CDS |
| ATCCCGGTTCTAATCCACAA+TGG | 0.688019 | 2_1:-55758583 | Msa0213150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATCAATTTTGATATTTAAT+CGG | - | chr2_1:55757899-55757918 | Msa0213150:intron | 10.0% |
| !! | AAAAAATAATAAATATTGGA+TGG | + | chr2_1:55758011-55758030 | None:intergenic | 10.0% |
| !!! | TATCAATTTTGATATTTAAT+CGG | - | chr2_1:55757899-55757918 | Msa0213150:intron | 10.0% |
| !! | AAAAAATAATAAATATTGGA+TGG | + | chr2_1:55758011-55758030 | None:intergenic | 10.0% |
| !!! | TTTCTTTAATTTTTTTAGAG+AGG | - | chr2_1:55758030-55758049 | Msa0213150:intron | 15.0% |
| !! | TGGATTAAAAATTTATTGAA+TGG | - | chr2_1:55758185-55758204 | Msa0213150:intron | 15.0% |
| !! | GGATTAAAAATTTATTGAAT+GGG | - | chr2_1:55758186-55758205 | Msa0213150:intron | 15.0% |
| !!! | TTTCTTTAATTTTTTTAGAG+AGG | - | chr2_1:55758030-55758049 | Msa0213150:intron | 15.0% |
| !! | TGGATTAAAAATTTATTGAA+TGG | - | chr2_1:55758185-55758204 | Msa0213150:intron | 15.0% |
| !! | GGATTAAAAATTTATTGAAT+GGG | - | chr2_1:55758186-55758205 | Msa0213150:intron | 15.0% |
| !!! | TTTAATTTTTTTAGAGAGGA+AGG | - | chr2_1:55758034-55758053 | Msa0213150:intron | 20.0% |
| !! | AATGTAATTTGATATTGAGT+AGG | + | chr2_1:55758223-55758242 | None:intergenic | 20.0% |
| !! | TACTCAATATCAAATTACAT+TGG | - | chr2_1:55758222-55758241 | Msa0213150:intron | 20.0% |
| !!! | TTTAATTTTTTTAGAGAGGA+AGG | - | chr2_1:55758034-55758053 | Msa0213150:intron | 20.0% |
| !! | AATGTAATTTGATATTGAGT+AGG | + | chr2_1:55758223-55758242 | None:intergenic | 20.0% |
| !! | TACTCAATATCAAATTACAT+TGG | - | chr2_1:55758222-55758241 | Msa0213150:intron | 20.0% |
| ! | AATTGTTGAGTATATTGATG+AGG | - | chr2_1:55757658-55757677 | Msa0213150:CDS | 25.0% |
| ! | TGTAGGCAAAAATAAGTTAT+TGG | + | chr2_1:55758144-55758163 | None:intergenic | 25.0% |
| !! | CGAATTTTGTAAAAATGTGT+AGG | + | chr2_1:55758161-55758180 | None:intergenic | 25.0% |
| !! | ATTTTTACAAAATTCGTCGT+TGG | - | chr2_1:55758165-55758184 | Msa0213150:intron | 25.0% |
| ! | TTTATTGAATGGGTCTAATA+AGG | - | chr2_1:55758196-55758215 | Msa0213150:intron | 25.0% |
| !!! | TGTTGTTTCCAACTAATTTT+GGG | - | chr2_1:55758378-55758397 | Msa0213150:intron | 25.0% |
| ! | AATTAACACCCAAAATTAGT+TGG | + | chr2_1:55758389-55758408 | None:intergenic | 25.0% |
| ! | AAAGTTTATAGGACCAAAAA+AGG | - | chr2_1:55758441-55758460 | Msa0213150:intron | 25.0% |
| !! | TTTGAAACATATGAGAAGTT+TGG | - | chr2_1:55758600-55758619 | Msa0213150:CDS | 25.0% |
| ! | AATTGTTGAGTATATTGATG+AGG | - | chr2_1:55757658-55757677 | Msa0213150:CDS | 25.0% |
| ! | TGTAGGCAAAAATAAGTTAT+TGG | + | chr2_1:55758144-55758163 | None:intergenic | 25.0% |
| !! | CGAATTTTGTAAAAATGTGT+AGG | + | chr2_1:55758161-55758180 | None:intergenic | 25.0% |
| !! | ATTTTTACAAAATTCGTCGT+TGG | - | chr2_1:55758165-55758184 | Msa0213150:intron | 25.0% |
| ! | TTTATTGAATGGGTCTAATA+AGG | - | chr2_1:55758196-55758215 | Msa0213150:intron | 25.0% |
| !!! | TGTTGTTTCCAACTAATTTT+GGG | - | chr2_1:55758378-55758397 | Msa0213150:intron | 25.0% |
| ! | AATTAACACCCAAAATTAGT+TGG | + | chr2_1:55758389-55758408 | None:intergenic | 25.0% |
| ! | AAAGTTTATAGGACCAAAAA+AGG | - | chr2_1:55758441-55758460 | Msa0213150:intron | 25.0% |
| !! | TTTGAAACATATGAGAAGTT+TGG | - | chr2_1:55758600-55758619 | Msa0213150:CDS | 25.0% |
| TTATCTTCTACAAATGAACC+CGG | - | chr2_1:55757577-55757596 | Msa0213150:CDS | 30.0% | |
| ATTACAAGTGACTCACAAAT+AGG | + | chr2_1:55757641-55757660 | None:intergenic | 30.0% | |
| TTGAGTATATTGATGAGGTT+TGG | - | chr2_1:55757663-55757682 | Msa0213150:CDS | 30.0% | |
| GATATTTAATCGGTTGAGTT+AGG | - | chr2_1:55757909-55757928 | Msa0213150:intron | 30.0% | |
| ! | CTTTCATCGATCTCTATTTT+AGG | - | chr2_1:55757973-55757992 | Msa0213150:intron | 30.0% |
| !!! | TCGATCTCTATTTTAGGTTT+TGG | - | chr2_1:55757979-55757998 | Msa0213150:intron | 30.0% |
| !! | CCTTACTACTTTTAGTGAAA+TGG | + | chr2_1:55758318-55758337 | None:intergenic | 30.0% |
| CCATTTCACTAAAAGTAGTA+AGG | - | chr2_1:55758315-55758334 | Msa0213150:intron | 30.0% | |
| !!! | GTGTTGTTTCCAACTAATTT+TGG | - | chr2_1:55758377-55758396 | Msa0213150:intron | 30.0% |
| TGTCAATAGATATATGAAGC+TGG | - | chr2_1:55758414-55758433 | Msa0213150:intron | 30.0% | |
| AATAGATATATGAAGCTGGA+AGG | - | chr2_1:55758418-55758437 | Msa0213150:intron | 30.0% | |
| !!! | TTCTTGTTCTTCTCCTTTTT+TGG | + | chr2_1:55758457-55758476 | None:intergenic | 30.0% |
| CATATCTATGAATTCCTTCT+TGG | + | chr2_1:55758484-55758503 | None:intergenic | 30.0% | |
| CATAGATATGCTCAAATTGT+TGG | - | chr2_1:55758494-55758513 | Msa0213150:CDS | 30.0% | |
| TTTCAAACCAACTGTAGAAT+GGG | + | chr2_1:55758587-55758606 | None:intergenic | 30.0% | |
| TTATCTTCTACAAATGAACC+CGG | - | chr2_1:55757577-55757596 | Msa0213150:CDS | 30.0% | |
| ATTACAAGTGACTCACAAAT+AGG | + | chr2_1:55757641-55757660 | None:intergenic | 30.0% | |
| TTGAGTATATTGATGAGGTT+TGG | - | chr2_1:55757663-55757682 | Msa0213150:CDS | 30.0% | |
| GATATTTAATCGGTTGAGTT+AGG | - | chr2_1:55757909-55757928 | Msa0213150:intron | 30.0% | |
| ! | CTTTCATCGATCTCTATTTT+AGG | - | chr2_1:55757973-55757992 | Msa0213150:intron | 30.0% |
| !!! | TCGATCTCTATTTTAGGTTT+TGG | - | chr2_1:55757979-55757998 | Msa0213150:intron | 30.0% |
| !! | CCTTACTACTTTTAGTGAAA+TGG | + | chr2_1:55758318-55758337 | None:intergenic | 30.0% |
| CCATTTCACTAAAAGTAGTA+AGG | - | chr2_1:55758315-55758334 | Msa0213150:intron | 30.0% | |
| !!! | GTGTTGTTTCCAACTAATTT+TGG | - | chr2_1:55758377-55758396 | Msa0213150:intron | 30.0% |
| TGTCAATAGATATATGAAGC+TGG | - | chr2_1:55758414-55758433 | Msa0213150:intron | 30.0% | |
| AATAGATATATGAAGCTGGA+AGG | - | chr2_1:55758418-55758437 | Msa0213150:intron | 30.0% | |
| !!! | TTCTTGTTCTTCTCCTTTTT+TGG | + | chr2_1:55758457-55758476 | None:intergenic | 30.0% |
| CATATCTATGAATTCCTTCT+TGG | + | chr2_1:55758484-55758503 | None:intergenic | 30.0% | |
| CATAGATATGCTCAAATTGT+TGG | - | chr2_1:55758494-55758513 | Msa0213150:CDS | 30.0% | |
| TTTCAAACCAACTGTAGAAT+GGG | + | chr2_1:55758587-55758606 | None:intergenic | 30.0% | |
| ATTCTTGCTCTCATTCCATA+AGG | + | chr2_1:55757494-55757513 | None:intergenic | 35.0% | |
| AGTTCATAGATAGAGATGCA+AGG | - | chr2_1:55757543-55757562 | Msa0213150:CDS | 35.0% | |
| GTTCATAGATAGAGATGCAA+GGG | - | chr2_1:55757544-55757563 | Msa0213150:CDS | 35.0% | |
| GGGTTCATTTGTAGAAGATA+AGG | + | chr2_1:55757578-55757597 | None:intergenic | 35.0% | |
| GTATATTGATGAGGTTTGGA+AGG | - | chr2_1:55757667-55757686 | Msa0213150:CDS | 35.0% | |
| ! | GGCTGACTATGTTGATAAAA+CGG | - | chr2_1:55757745-55757764 | Msa0213150:CDS | 35.0% |
| TTGAAACTCACATACACAAG+TGG | - | chr2_1:55757849-55757868 | Msa0213150:intron | 35.0% | |
| !!! | CTCTATTTTAGGTTTTGGTG+TGG | - | chr2_1:55757984-55758003 | Msa0213150:intron | 35.0% |
| GAGAAGACATCAAATTACGT+TGG | - | chr2_1:55758095-55758114 | Msa0213150:intron | 35.0% | |
| AAGCTGGAAGGAAAGTTTAT+AGG | - | chr2_1:55758430-55758449 | Msa0213150:intron | 35.0% | |
| AAATTGTTGGAGAAACAGCT+GGG | - | chr2_1:55758507-55758526 | Msa0213150:CDS | 35.0% | |
| GTTTCAAACCAACTGTAGAA+TGG | + | chr2_1:55758588-55758607 | None:intergenic | 35.0% | |
| TTAGCCCATTCAATGAACTT+GGG | + | chr2_1:55758651-55758670 | None:intergenic | 35.0% | |
| ATTAGCCCATTCAATGAACT+TGG | + | chr2_1:55758652-55758671 | None:intergenic | 35.0% | |
| !! | AGTTCATTGAATGGGCTAAT+AGG | - | chr2_1:55758652-55758671 | Msa0213150:CDS | 35.0% |
| ATTCTTGCTCTCATTCCATA+AGG | + | chr2_1:55757494-55757513 | None:intergenic | 35.0% | |
| AGTTCATAGATAGAGATGCA+AGG | - | chr2_1:55757543-55757562 | Msa0213150:CDS | 35.0% | |
| GTTCATAGATAGAGATGCAA+GGG | - | chr2_1:55757544-55757563 | Msa0213150:CDS | 35.0% | |
| GGGTTCATTTGTAGAAGATA+AGG | + | chr2_1:55757578-55757597 | None:intergenic | 35.0% | |
| GTATATTGATGAGGTTTGGA+AGG | - | chr2_1:55757667-55757686 | Msa0213150:CDS | 35.0% | |
| ! | GGCTGACTATGTTGATAAAA+CGG | - | chr2_1:55757745-55757764 | Msa0213150:CDS | 35.0% |
| TTGAAACTCACATACACAAG+TGG | - | chr2_1:55757849-55757868 | Msa0213150:intron | 35.0% | |
| !!! | CTCTATTTTAGGTTTTGGTG+TGG | - | chr2_1:55757984-55758003 | Msa0213150:intron | 35.0% |
| GAGAAGACATCAAATTACGT+TGG | - | chr2_1:55758095-55758114 | Msa0213150:intron | 35.0% | |
| AAGCTGGAAGGAAAGTTTAT+AGG | - | chr2_1:55758430-55758449 | Msa0213150:intron | 35.0% | |
| AAATTGTTGGAGAAACAGCT+GGG | - | chr2_1:55758507-55758526 | Msa0213150:CDS | 35.0% | |
| GTTTCAAACCAACTGTAGAA+TGG | + | chr2_1:55758588-55758607 | None:intergenic | 35.0% | |
| TTAGCCCATTCAATGAACTT+GGG | + | chr2_1:55758651-55758670 | None:intergenic | 35.0% | |
| ATTAGCCCATTCAATGAACT+TGG | + | chr2_1:55758652-55758671 | None:intergenic | 35.0% | |
| !! | AGTTCATTGAATGGGCTAAT+AGG | - | chr2_1:55758652-55758671 | Msa0213150:CDS | 35.0% |
| !!! | AGGTGGTTTTGTTAGGTTTC+TGG | - | chr2_1:55757462-55757481 | Msa0213150:CDS | 40.0% |
| ! | GGTTTCTGGATAAGTCCTTA+TGG | - | chr2_1:55757476-55757495 | Msa0213150:CDS | 40.0% |
| AAGAATAGCCCTTGCTGAAA+AGG | - | chr2_1:55757508-55757527 | Msa0213150:CDS | 40.0% | |
| AGAATAGCCCTTGCTGAAAA+GGG | - | chr2_1:55757509-55757528 | Msa0213150:CDS | 40.0% | |
| ATAGAGATGCAAGGGAGAAT+TGG | - | chr2_1:55757552-55757571 | Msa0213150:CDS | 40.0% | |
| !! | TTGCCATTGTGGATTAGAAC+CGG | + | chr2_1:55757617-55757636 | None:intergenic | 40.0% |
| CACAAATAGGTTTGCCATTG+TGG | + | chr2_1:55757628-55757647 | None:intergenic | 40.0% | |
| ! | AAAATCTAGCTTGTGCTCTC+AGG | + | chr2_1:55757724-55757743 | None:intergenic | 40.0% |
| !! | TGAGAGCACAAGCTAGATTT+TGG | - | chr2_1:55757723-55757742 | Msa0213150:CDS | 40.0% |
| !! | GAGAGCACAAGCTAGATTTT+GGG | - | chr2_1:55757724-55757743 | Msa0213150:CDS | 40.0% |
| AACTCACATACACAAGTGGA+AGG | - | chr2_1:55757853-55757872 | Msa0213150:intron | 40.0% | |
| CAAATTGTTGGAGAAACAGC+TGG | - | chr2_1:55758506-55758525 | Msa0213150:CDS | 40.0% | |
| !! | TATTTTGGAGGAGACAGACT+TGG | - | chr2_1:55758540-55758559 | Msa0213150:CDS | 40.0% |
| GGCACTCAATCTCTATATTG+AGG | + | chr2_1:55758629-55758648 | None:intergenic | 40.0% | |
| TAGCCCATTCAATGAACTTG+GGG | + | chr2_1:55758650-55758669 | None:intergenic | 40.0% | |
| !!! | AGGTGGTTTTGTTAGGTTTC+TGG | - | chr2_1:55757462-55757481 | Msa0213150:CDS | 40.0% |
| ! | GGTTTCTGGATAAGTCCTTA+TGG | - | chr2_1:55757476-55757495 | Msa0213150:CDS | 40.0% |
| AAGAATAGCCCTTGCTGAAA+AGG | - | chr2_1:55757508-55757527 | Msa0213150:CDS | 40.0% | |
| AGAATAGCCCTTGCTGAAAA+GGG | - | chr2_1:55757509-55757528 | Msa0213150:CDS | 40.0% | |
| ATAGAGATGCAAGGGAGAAT+TGG | - | chr2_1:55757552-55757571 | Msa0213150:CDS | 40.0% | |
| !! | TTGCCATTGTGGATTAGAAC+CGG | + | chr2_1:55757617-55757636 | None:intergenic | 40.0% |
| CACAAATAGGTTTGCCATTG+TGG | + | chr2_1:55757628-55757647 | None:intergenic | 40.0% | |
| ! | AAAATCTAGCTTGTGCTCTC+AGG | + | chr2_1:55757724-55757743 | None:intergenic | 40.0% |
| !! | TGAGAGCACAAGCTAGATTT+TGG | - | chr2_1:55757723-55757742 | Msa0213150:CDS | 40.0% |
| !! | GAGAGCACAAGCTAGATTTT+GGG | - | chr2_1:55757724-55757743 | Msa0213150:CDS | 40.0% |
| AACTCACATACACAAGTGGA+AGG | - | chr2_1:55757853-55757872 | Msa0213150:intron | 40.0% | |
| CAAATTGTTGGAGAAACAGC+TGG | - | chr2_1:55758506-55758525 | Msa0213150:CDS | 40.0% | |
| !! | TATTTTGGAGGAGACAGACT+TGG | - | chr2_1:55758540-55758559 | Msa0213150:CDS | 40.0% |
| GGCACTCAATCTCTATATTG+AGG | + | chr2_1:55758629-55758648 | None:intergenic | 40.0% | |
| TAGCCCATTCAATGAACTTG+GGG | + | chr2_1:55758650-55758669 | None:intergenic | 40.0% | |
| !!! | GCTGATGAGGTGGTTTTGTT+AGG | - | chr2_1:55757455-55757474 | Msa0213150:CDS | 45.0% |
| ! | CTTGACACCCTTTTCAGCAA+GGG | + | chr2_1:55757519-55757538 | None:intergenic | 45.0% |
| ! | ACTTGACACCCTTTTCAGCA+AGG | + | chr2_1:55757520-55757539 | None:intergenic | 45.0% |
| ! | ACCGGGATTTTCTTGTGAAC+CGG | + | chr2_1:55757599-55757618 | None:intergenic | 45.0% |
| ! | ATCCCGGTTCTAATCCACAA+TGG | - | chr2_1:55757611-55757630 | Msa0213150:CDS | 45.0% |
| !! | TGCCATTGTGGATTAGAACC+GGG | + | chr2_1:55757616-55757635 | None:intergenic | 45.0% |
| TAGGGATCAGAAGGCAACAA+CGG | + | chr2_1:55757701-55757720 | None:intergenic | 45.0% | |
| CACATACACAAGTGGAAGGA+CGG | - | chr2_1:55757857-55757876 | Msa0213150:intron | 45.0% | |
| ACATACACAAGTGGAAGGAC+GGG | - | chr2_1:55757858-55757877 | Msa0213150:intron | 45.0% | |
| AGAACAAGAAGCTGCCAAGA+AGG | - | chr2_1:55758467-55758486 | Msa0213150:CDS | 45.0% | |
| ! | CTGGGAGACAAGGCTTATTT+TGG | - | chr2_1:55758525-55758544 | Msa0213150:CDS | 45.0% |
| !!! | GGAGACAAGGCTTATTTTGG+AGG | - | chr2_1:55758528-55758547 | Msa0213150:CDS | 45.0% |
| CCAACTGTAGAATGGGACTA+GGG | + | chr2_1:55758580-55758599 | None:intergenic | 45.0% | |
| ACCAACTGTAGAATGGGACT+AGG | + | chr2_1:55758581-55758600 | None:intergenic | 45.0% | |
| AGTGCCCCAAGTTCATTGAA+TGG | - | chr2_1:55758643-55758662 | Msa0213150:CDS | 45.0% | |
| GTGCCCCAAGTTCATTGAAT+GGG | - | chr2_1:55758644-55758663 | Msa0213150:CDS | 45.0% | |
| ! | ATGCTGGTTAGGAAGAGACT+TGG | + | chr2_1:55758700-55758719 | None:intergenic | 45.0% |
| GTCTCTTCCTAACCAGCATA+AGG | - | chr2_1:55758701-55758720 | Msa0213150:CDS | 45.0% | |
| ! | TCGTAGACCTTATGCTGGTT+AGG | + | chr2_1:55758711-55758730 | None:intergenic | 45.0% |
| TGAACTCGTAGACCTTATGC+TGG | + | chr2_1:55758716-55758735 | None:intergenic | 45.0% | |
| !!! | GCTGATGAGGTGGTTTTGTT+AGG | - | chr2_1:55757455-55757474 | Msa0213150:CDS | 45.0% |
| ! | CTTGACACCCTTTTCAGCAA+GGG | + | chr2_1:55757519-55757538 | None:intergenic | 45.0% |
| ! | ACTTGACACCCTTTTCAGCA+AGG | + | chr2_1:55757520-55757539 | None:intergenic | 45.0% |
| ! | ACCGGGATTTTCTTGTGAAC+CGG | + | chr2_1:55757599-55757618 | None:intergenic | 45.0% |
| ! | ATCCCGGTTCTAATCCACAA+TGG | - | chr2_1:55757611-55757630 | Msa0213150:CDS | 45.0% |
| !! | TGCCATTGTGGATTAGAACC+GGG | + | chr2_1:55757616-55757635 | None:intergenic | 45.0% |
| TAGGGATCAGAAGGCAACAA+CGG | + | chr2_1:55757701-55757720 | None:intergenic | 45.0% | |
| CACATACACAAGTGGAAGGA+CGG | - | chr2_1:55757857-55757876 | Msa0213150:intron | 45.0% | |
| ACATACACAAGTGGAAGGAC+GGG | - | chr2_1:55757858-55757877 | Msa0213150:intron | 45.0% | |
| AGAACAAGAAGCTGCCAAGA+AGG | - | chr2_1:55758467-55758486 | Msa0213150:CDS | 45.0% | |
| ! | CTGGGAGACAAGGCTTATTT+TGG | - | chr2_1:55758525-55758544 | Msa0213150:CDS | 45.0% |
| !!! | GGAGACAAGGCTTATTTTGG+AGG | - | chr2_1:55758528-55758547 | Msa0213150:CDS | 45.0% |
| CCAACTGTAGAATGGGACTA+GGG | + | chr2_1:55758580-55758599 | None:intergenic | 45.0% | |
| ACCAACTGTAGAATGGGACT+AGG | + | chr2_1:55758581-55758600 | None:intergenic | 45.0% | |
| AGTGCCCCAAGTTCATTGAA+TGG | - | chr2_1:55758643-55758662 | Msa0213150:CDS | 45.0% | |
| GTGCCCCAAGTTCATTGAAT+GGG | - | chr2_1:55758644-55758663 | Msa0213150:CDS | 45.0% | |
| ! | ATGCTGGTTAGGAAGAGACT+TGG | + | chr2_1:55758700-55758719 | None:intergenic | 45.0% |
| GTCTCTTCCTAACCAGCATA+AGG | - | chr2_1:55758701-55758720 | Msa0213150:CDS | 45.0% | |
| ! | TCGTAGACCTTATGCTGGTT+AGG | + | chr2_1:55758711-55758730 | None:intergenic | 45.0% |
| TGAACTCGTAGACCTTATGC+TGG | + | chr2_1:55758716-55758735 | None:intergenic | 45.0% | |
| !! | AGAAAAAAAATAATAAATAT+TGG | + | chr2_1:55758015-55758034 | None:intergenic | 5.0% |
| !! | AGAAAAAAAATAATAAATAT+TGG | + | chr2_1:55758015-55758034 | None:intergenic | 5.0% |
| ! | CCGGGATTTTCTTGTGAACC+GGG | + | chr2_1:55757598-55757617 | None:intergenic | 50.0% |
| CCCGGTTCACAAGAAAATCC+CGG | - | chr2_1:55757595-55757614 | Msa0213150:CDS | 50.0% | |
| ! | CTAGCTTGTGCTCTCAGGTA+GGG | + | chr2_1:55757719-55757738 | None:intergenic | 50.0% |
| ! | TCTAGCTTGTGCTCTCAGGT+AGG | + | chr2_1:55757720-55757739 | None:intergenic | 50.0% |
| ! | TGGAGGAGACAGACTTGGTT+TGG | - | chr2_1:55758545-55758564 | Msa0213150:CDS | 50.0% |
| CCCTAGTCCCATTCTACAGT+TGG | - | chr2_1:55758577-55758596 | Msa0213150:CDS | 50.0% | |
| ! | CCGGGATTTTCTTGTGAACC+GGG | + | chr2_1:55757598-55757617 | None:intergenic | 50.0% |
| CCCGGTTCACAAGAAAATCC+CGG | - | chr2_1:55757595-55757614 | Msa0213150:CDS | 50.0% | |
| ! | CTAGCTTGTGCTCTCAGGTA+GGG | + | chr2_1:55757719-55757738 | None:intergenic | 50.0% |
| ! | TCTAGCTTGTGCTCTCAGGT+AGG | + | chr2_1:55757720-55757739 | None:intergenic | 50.0% |
| ! | TGGAGGAGACAGACTTGGTT+TGG | - | chr2_1:55758545-55758564 | Msa0213150:CDS | 50.0% |
| CCCTAGTCCCATTCTACAGT+TGG | - | chr2_1:55758577-55758596 | Msa0213150:CDS | 50.0% | |
| GCTCTCAGGTAGGGATCAGA+AGG | + | chr2_1:55757710-55757729 | None:intergenic | 55.0% | |
| TACACAAGTGGAAGGACGGG+TGG | - | chr2_1:55757861-55757880 | Msa0213150:intron | 55.0% | |
| GGAGAAACAGCTGGGAGACA+AGG | - | chr2_1:55758515-55758534 | Msa0213150:CDS | 55.0% | |
| GCTCTCAGGTAGGGATCAGA+AGG | + | chr2_1:55757710-55757729 | None:intergenic | 55.0% | |
| TACACAAGTGGAAGGACGGG+TGG | - | chr2_1:55757861-55757880 | Msa0213150:intron | 55.0% | |
| GGAGAAACAGCTGGGAGACA+AGG | - | chr2_1:55758515-55758534 | Msa0213150:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 55757452 | 55758764 | 55757452 | ID=Msa0213150;Name=Msa0213150 |
| chr2_1 | mRNA | 55757452 | 55758764 | 55757452 | ID=Msa0213150-mRNA-1;Parent=Msa0213150;Name=Msa0213150-mRNA-1;_AED=0.30;_eAED=0.30;_QI=0|0|0|1|1|1|2|0|218 |
| chr2_1 | exon | 55758450 | 55758764 | 55758450 | ID=Msa0213150-mRNA-1:exon:15484;Parent=Msa0213150-mRNA-1 |
| chr2_1 | exon | 55757452 | 55757793 | 55757452 | ID=Msa0213150-mRNA-1:exon:15483;Parent=Msa0213150-mRNA-1 |
| chr2_1 | CDS | 55758450 | 55758764 | 55758450 | ID=Msa0213150-mRNA-1:cds;Parent=Msa0213150-mRNA-1 |
| chr2_1 | CDS | 55757452 | 55757793 | 55757452 | ID=Msa0213150-mRNA-1:cds;Parent=Msa0213150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
