Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0253450 | KEH38386.1 | 95.429 | 175 | 3 | 2 | 1 | 170 | 47 | 221 | 1.58e-115 | 336 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0253450 | sp|P49332|GSTXC_TOBAC | 67.429 | 175 | 51 | 3 | 1 | 170 | 48 | 221 | 1.14e-81 | 243 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0253450 | A0A072V9X8 | 95.429 | 175 | 3 | 2 | 1 | 170 | 47 | 221 | 7.53e-116 | 336 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0063540 | Msa0253450 | 0.804173 | 2.452686e-49 | -8.615850e-47 |
| Msa0073110 | Msa0253450 | 0.810483 | 1.126972e-50 | -8.615850e-47 |
| Msa0106540 | Msa0253450 | 0.800830 | 1.198726e-48 | -8.615850e-47 |
| Msa0140270 | Msa0253450 | 0.800813 | 1.208419e-48 | -8.615850e-47 |
| Msa0163340 | Msa0253450 | 0.806420 | 8.296310e-50 | -8.615850e-47 |
| Msa0190890 | Msa0253450 | 0.809800 | 1.582050e-50 | -8.615850e-47 |
| Msa0209060 | Msa0253450 | 0.811596 | 6.467742e-51 | -8.615850e-47 |
| Msa0213150 | Msa0253450 | 0.874793 | 5.114971e-68 | -8.615850e-47 |
| Msa0220090 | Msa0253450 | 0.810689 | 1.017549e-50 | -8.615850e-47 |
| Msa0238110 | Msa0253450 | 0.803366 | 3.606959e-49 | -8.615850e-47 |
| Msa0253450 | Msa0261400 | 0.820739 | 5.851242e-53 | -8.615850e-47 |
| Msa0253450 | Msa0288540 | 0.807907 | 4.018034e-50 | -8.615850e-47 |
| Msa0253450 | Msa0292250 | 0.833585 | 4.902245e-56 | -8.615850e-47 |
| Msa0253450 | Msa0299030 | 0.802827 | 4.662618e-49 | -8.615850e-47 |
| Msa0253450 | Msa0326770 | 0.815125 | 1.085210e-51 | -8.615850e-47 |
| Msa0253450 | Msa0328100 | 0.806261 | 8.963469e-50 | -8.615850e-47 |
| Msa0253450 | Msa0349930 | 0.812684 | 3.745128e-51 | -8.615850e-47 |
| Msa0253450 | Msa0357550 | 0.800673 | 1.290432e-48 | -8.615850e-47 |
| Msa0253450 | Msa0366510 | 0.808041 | 3.763756e-50 | -8.615850e-47 |
| Msa0253450 | Msa0379480 | 0.816653 | 4.948516e-52 | -8.615850e-47 |
| Msa0253450 | Msa0386910 | 0.809764 | 1.610139e-50 | -8.615850e-47 |
| Msa0253450 | Msa0414480 | 0.821096 | 4.841833e-53 | -8.615850e-47 |
| Msa0253450 | Msa0425950 | 0.810754 | 9.850548e-51 | -8.615850e-47 |
| Msa0253450 | Msa0426030 | 0.806536 | 7.841589e-50 | -8.615850e-47 |
| Msa0253450 | Msa0472390 | 0.803977 | 2.694642e-49 | -8.615850e-47 |
| Msa0253450 | Msa0496070 | 0.805691 | 1.181546e-49 | -8.615850e-47 |
| Msa0253450 | Msa0523720 | 0.812192 | 4.796508e-51 | -8.615850e-47 |
| Msa0253450 | Msa0530990 | 0.806885 | 6.619499e-50 | -8.615850e-47 |
| Msa0253450 | Msa0549170 | 0.801293 | 9.641060e-49 | -8.615850e-47 |
| Msa0253450 | Msa0554660 | 0.806220 | 9.141489e-50 | -8.615850e-47 |
| Msa0253450 | Msa0567330 | 0.805452 | 1.326196e-49 | -8.615850e-47 |
| Msa0253450 | Msa0567570 | 0.802417 | 5.666810e-49 | -8.615850e-47 |
| Msa0253450 | Msa0576320 | 0.806433 | 8.247244e-50 | -8.615850e-47 |
| Msa0253450 | Msa0616300 | 0.810644 | 1.040251e-50 | -8.615850e-47 |
| Msa0253450 | Msa0629720 | 0.809723 | 1.643495e-50 | -8.615850e-47 |
| Msa0253450 | Msa0643840 | 0.809498 | 1.837268e-50 | -8.615850e-47 |
| Msa0253450 | Msa0645370 | 0.807116 | 5.914832e-50 | -8.615850e-47 |
| Msa0253450 | Msa0655800 | 0.810626 | 1.049851e-50 | -8.615850e-47 |
| Msa0253450 | Msa0667600 | 0.818729 | 1.683501e-52 | -8.615850e-47 |
| Msa0253450 | Msa0685080 | 0.800269 | 1.559963e-48 | -8.615850e-47 |
| Msa0253450 | Msa0715220 | 0.809353 | 1.973241e-50 | -8.615850e-47 |
| Msa0253450 | Msa0768670 | 0.806316 | 8.727172e-50 | -8.615850e-47 |
| Msa0253450 | Msa0768720 | 0.804845 | 1.776574e-49 | -8.615850e-47 |
| Msa0253450 | Msa0814160 | 0.807966 | 3.903970e-50 | -8.615850e-47 |
| Msa0253450 | Msa0814230 | 0.827874 | 1.229090e-54 | -8.615850e-47 |
| Msa0253450 | Msa0869660 | 0.817544 | 3.121655e-52 | -8.615850e-47 |
| Msa0253450 | Msa0873880 | 0.832464 | 9.314262e-56 | -8.615850e-47 |
| Msa0253450 | Msa0896920 | 0.807328 | 5.334775e-50 | -8.615850e-47 |
| Msa0253450 | Msa0896950 | 0.815097 | 1.100935e-51 | -8.615850e-47 |
| Msa0253450 | Msa0898970 | 0.806371 | 8.499844e-50 | -8.615850e-47 |
| Msa0253450 | Msa0903020 | 0.828913 | 6.901354e-55 | -8.615850e-47 |
| Msa0253450 | Msa0913550 | 0.845081 | 5.071477e-59 | -8.615850e-47 |
| Msa0253450 | Msa0946010 | 0.809950 | 1.468684e-50 | -8.615850e-47 |
| Msa0253450 | Msa0946310 | 0.809939 | 1.476829e-50 | -8.615850e-47 |
| Msa0253450 | Msa0951150 | 0.836785 | 7.632505e-57 | -8.615850e-47 |
| Msa0253450 | Msa0959220 | 0.802448 | 5.583349e-49 | -8.615850e-47 |
| Msa0253450 | Msa0987640 | 0.825044 | 5.809937e-54 | -8.615850e-47 |
| Msa0253450 | Msa0990490 | 0.826426 | 2.731096e-54 | -8.615850e-47 |
| Msa0253450 | Msa1006220 | 0.803960 | 2.716486e-49 | -8.615850e-47 |
| Msa0253450 | Msa1030320 | 0.818848 | 1.582011e-52 | -8.615850e-47 |
| Msa0253450 | Msa1071230 | 0.806432 | 8.250516e-50 | -8.615850e-47 |
| Msa0253450 | Msa1079820 | 0.809241 | 2.085274e-50 | -8.615850e-47 |
| Msa0253450 | Msa1108560 | 0.805978 | 1.028048e-49 | -8.615850e-47 |
| Msa0253450 | Msa1157210 | 0.815649 | 8.295769e-52 | -8.615850e-47 |
| Msa0253450 | Msa1167960 | 0.806814 | 6.853029e-50 | -8.615850e-47 |
| Msa0253450 | Msa1205770 | 0.800073 | 1.710337e-48 | -8.615850e-47 |
| Msa0253450 | Msa1233640 | 0.807224 | 5.611996e-50 | -8.615850e-47 |
| Msa0253450 | Msa1269050 | 0.818929 | 1.516702e-52 | -8.615850e-47 |
| Msa0253450 | Msa1297850 | 0.800903 | 1.158225e-48 | -8.615850e-47 |
| Msa0253450 | Msa1323080 | 0.817090 | 3.949992e-52 | -8.615850e-47 |
| Msa0253450 | Msa1368420 | 0.807513 | 4.871954e-50 | -8.615850e-47 |
| Msa0253450 | Msa1380740 | 0.801072 | 1.070136e-48 | -8.615850e-47 |
| Msa0253450 | Msa1383220 | 0.805237 | 1.470761e-49 | -8.615850e-47 |
| Msa0253450 | Msa1407810 | 0.803711 | 3.059316e-49 | -8.615850e-47 |
| Msa0253450 | Msa1437780 | 0.804595 | 2.003693e-49 | -8.615850e-47 |
| Msa0253450 | Msa1445900 | 0.819714 | 1.004428e-52 | -8.615850e-47 |
| Msa0253450 | Msa1455360 | 0.801831 | 7.477524e-49 | -8.615850e-47 |
| Msa0253450 | Msa1459610 | 0.814957 | 1.182605e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0253450 | MtrunA17_Chr2g0312791 | 95.429 | 175 | 3 | 2 | 1 | 170 | 47 | 221 | 1.45e-119 | 336 |
| Msa0253450 | MtrunA17_Chr2g0312771 | 72.414 | 174 | 43 | 2 | 1 | 170 | 47 | 219 | 1.27e-93 | 271 |
| Msa0253450 | MtrunA17_Chr2g0312751 | 68.966 | 174 | 49 | 2 | 1 | 170 | 47 | 219 | 1.10e-90 | 263 |
| Msa0253450 | MtrunA17_Chr2g0312811 | 71.839 | 174 | 44 | 2 | 1 | 170 | 49 | 221 | 4.49e-90 | 262 |
| Msa0253450 | MtrunA17_Chr2g0312781 | 68.023 | 172 | 49 | 3 | 1 | 168 | 64 | 233 | 9.86e-86 | 251 |
| Msa0253450 | MtrunA17_Chr2g0312731 | 65.517 | 174 | 55 | 2 | 1 | 170 | 47 | 219 | 2.86e-84 | 247 |
| Msa0253450 | MtrunA17_Chr3g0107731 | 62.069 | 174 | 61 | 2 | 1 | 170 | 52 | 224 | 2.06e-75 | 225 |
| Msa0253450 | MtrunA17_Chr2g0312681 | 56.069 | 173 | 71 | 2 | 1 | 169 | 47 | 218 | 2.06e-72 | 217 |
| Msa0253450 | MtrunA17_Chr2g0312691 | 58.960 | 173 | 66 | 2 | 1 | 169 | 47 | 218 | 2.97e-71 | 214 |
| Msa0253450 | MtrunA17_Chr3g0107741 | 63.190 | 163 | 55 | 2 | 1 | 159 | 52 | 213 | 9.52e-71 | 213 |
| Msa0253450 | MtrunA17_Chr8g0357211 | 61.446 | 166 | 59 | 2 | 1 | 162 | 47 | 211 | 4.00e-70 | 211 |
| Msa0253450 | MtrunA17_Chr8g0357241 | 59.649 | 171 | 64 | 2 | 1 | 167 | 47 | 216 | 8.69e-70 | 210 |
| Msa0253450 | MtrunA17_Chr2g0312711 | 56.725 | 171 | 72 | 1 | 1 | 169 | 47 | 217 | 2.90e-67 | 204 |
| Msa0253450 | MtrunA17_Chr2g0312721 | 58.537 | 164 | 63 | 2 | 1 | 160 | 47 | 209 | 1.72e-64 | 197 |
| Msa0253450 | MtrunA17_Chr4g0069471 | 62.044 | 137 | 45 | 3 | 1 | 133 | 69 | 202 | 4.26e-58 | 180 |
| Msa0253450 | MtrunA17_Chr5g0433801 | 47.977 | 173 | 84 | 3 | 2 | 170 | 51 | 221 | 1.48e-53 | 169 |
| Msa0253450 | MtrunA17_Chr1g0196661 | 40.462 | 173 | 95 | 4 | 2 | 167 | 47 | 218 | 1.09e-38 | 131 |
| Msa0253450 | MtrunA17_Chr1g0196691 | 40.805 | 174 | 94 | 5 | 2 | 167 | 72 | 244 | 7.58e-38 | 130 |
| Msa0253450 | MtrunA17_Chr7g0240681 | 40.000 | 165 | 90 | 4 | 2 | 159 | 51 | 213 | 3.58e-36 | 125 |
| Msa0253450 | MtrunA17_Chr6g0483141 | 41.212 | 165 | 91 | 3 | 2 | 161 | 47 | 210 | 7.38e-36 | 124 |
| Msa0253450 | MtrunA17_Chr7g0240581 | 43.590 | 156 | 80 | 4 | 2 | 151 | 51 | 204 | 8.71e-36 | 124 |
| Msa0253450 | MtrunA17_Chr1g0196721 | 41.818 | 165 | 88 | 4 | 2 | 159 | 46 | 209 | 5.93e-35 | 122 |
| Msa0253450 | MtrunA17_Chr7g0240561 | 41.818 | 165 | 88 | 4 | 2 | 160 | 51 | 213 | 8.65e-35 | 121 |
| Msa0253450 | MtrunA17_Chr7g0240541 | 44.512 | 164 | 83 | 5 | 2 | 159 | 51 | 212 | 1.35e-34 | 120 |
| Msa0253450 | MtrunA17_Chr4g0029341 | 39.884 | 173 | 94 | 5 | 2 | 166 | 48 | 218 | 1.72e-34 | 120 |
| Msa0253450 | MtrunA17_Chr8g0379561 | 42.308 | 156 | 84 | 3 | 1 | 151 | 49 | 203 | 1.81e-34 | 120 |
| Msa0253450 | MtrunA17_Chr5g0415411 | 42.197 | 173 | 82 | 6 | 2 | 159 | 49 | 218 | 2.29e-34 | 120 |
| Msa0253450 | MtrunA17_Chr7g0240641 | 41.818 | 165 | 88 | 4 | 2 | 160 | 51 | 213 | 3.26e-34 | 120 |
| Msa0253450 | MtrunA17_Chr7g0240551 | 44.512 | 164 | 83 | 5 | 2 | 159 | 51 | 212 | 5.39e-34 | 119 |
| Msa0253450 | MtrunA17_Chr4g0008781 | 39.535 | 172 | 94 | 5 | 2 | 166 | 52 | 220 | 8.82e-34 | 119 |
| Msa0253450 | MtrunA17_Chr7g0240691 | 40.000 | 165 | 90 | 4 | 2 | 159 | 81 | 243 | 9.15e-34 | 119 |
| Msa0253450 | MtrunA17_Chr7g0240531 | 44.512 | 164 | 83 | 5 | 2 | 159 | 51 | 212 | 9.24e-34 | 119 |
| Msa0253450 | MtrunA17_Chr8g0379581 | 40.373 | 161 | 90 | 3 | 1 | 156 | 48 | 207 | 1.02e-33 | 119 |
| Msa0253450 | MtrunA17_Chr7g0240631 | 40.854 | 164 | 89 | 4 | 2 | 159 | 51 | 212 | 1.21e-33 | 118 |
| Msa0253450 | MtrunA17_Chr7g0240511 | 42.442 | 172 | 88 | 5 | 2 | 168 | 51 | 216 | 1.79e-33 | 118 |
| Msa0253450 | MtrunA17_Chr5g0417011 | 36.145 | 166 | 94 | 4 | 2 | 156 | 51 | 215 | 1.08e-32 | 116 |
| Msa0253450 | MtrunA17_Chr1g0196711 | 40.462 | 173 | 95 | 5 | 2 | 167 | 47 | 218 | 2.19e-32 | 115 |
| Msa0253450 | MtrunA17_Chr1g0196771 | 38.824 | 170 | 97 | 5 | 2 | 165 | 47 | 215 | 2.37e-32 | 115 |
| Msa0253450 | MtrunA17_Chr3g0132581 | 42.593 | 162 | 87 | 4 | 2 | 158 | 49 | 209 | 4.31e-31 | 112 |
| Msa0253450 | MtrunA17_Chr7g0240611 | 39.634 | 164 | 89 | 6 | 2 | 160 | 51 | 209 | 6.51e-31 | 111 |
| Msa0253450 | MtrunA17_Chr8g0363751 | 38.182 | 165 | 92 | 2 | 2 | 156 | 51 | 215 | 1.37e-30 | 110 |
| Msa0253450 | MtrunA17_Chr7g0240671 | 39.375 | 160 | 89 | 5 | 2 | 157 | 48 | 203 | 3.27e-30 | 109 |
| Msa0253450 | MtrunA17_Chr4g0008791 | 38.415 | 164 | 93 | 4 | 2 | 159 | 51 | 212 | 5.62e-30 | 109 |
| Msa0253450 | MtrunA17_Chr1g0212301 | 40.244 | 164 | 87 | 6 | 2 | 156 | 47 | 208 | 4.95e-29 | 106 |
| Msa0253450 | MtrunA17_Chr7g0240521 | 43.590 | 156 | 80 | 4 | 2 | 151 | 58 | 211 | 2.48e-28 | 105 |
| Msa0253450 | MtrunA17_Chr2g0313561 | 57.534 | 73 | 27 | 1 | 1 | 69 | 1 | 73 | 1.52e-27 | 98.6 |
| Msa0253450 | MtrunA17_Chr7g0240661 | 40.123 | 162 | 89 | 5 | 2 | 159 | 51 | 208 | 2.08e-27 | 102 |
| Msa0253450 | MtrunA17_Chr7g0240651 | 40.244 | 164 | 86 | 6 | 2 | 159 | 51 | 208 | 1.40e-26 | 100 |
| Msa0253450 | MtrunA17_Chr8g0391631 | 43.119 | 109 | 54 | 1 | 2 | 102 | 67 | 175 | 1.05e-24 | 94.4 |
| Msa0253450 | MtrunA17_Chr1g0181861 | 30.405 | 148 | 93 | 5 | 6 | 149 | 77 | 218 | 1.48e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0253450 | AT1G17180.1 | 63.218 | 174 | 59 | 2 | 1 | 170 | 47 | 219 | 1.50e-79 | 235 |
| Msa0253450 | AT1G78380.1 | 63.158 | 171 | 58 | 2 | 1 | 167 | 47 | 216 | 1.19e-75 | 226 |
| Msa0253450 | AT1G17170.1 | 60.920 | 174 | 62 | 3 | 1 | 170 | 47 | 218 | 2.99e-74 | 222 |
| Msa0253450 | AT1G78370.1 | 61.310 | 168 | 60 | 2 | 2 | 165 | 48 | 214 | 1.72e-73 | 220 |
| Msa0253450 | AT1G78340.1 | 61.350 | 163 | 58 | 2 | 1 | 159 | 47 | 208 | 1.07e-71 | 215 |
| Msa0253450 | AT1G78360.1 | 59.770 | 174 | 65 | 2 | 1 | 170 | 48 | 220 | 1.30e-71 | 215 |
| Msa0253450 | AT1G78320.1 | 60.116 | 173 | 65 | 2 | 1 | 169 | 47 | 219 | 4.88e-71 | 214 |
| Msa0253450 | AT1G53680.1 | 55.172 | 174 | 73 | 1 | 2 | 170 | 51 | 224 | 2.22e-69 | 210 |
| Msa0253450 | AT1G17190.1 | 54.651 | 172 | 73 | 2 | 1 | 168 | 48 | 218 | 8.60e-65 | 198 |
| Msa0253450 | AT3G43800.1 | 53.801 | 171 | 71 | 4 | 2 | 165 | 50 | 219 | 1.10e-63 | 195 |
| Msa0253450 | AT1G78320.2 | 49.711 | 173 | 56 | 3 | 1 | 169 | 47 | 192 | 2.27e-49 | 158 |
| Msa0253450 | AT2G29420.1 | 42.045 | 176 | 94 | 5 | 1 | 170 | 52 | 225 | 3.63e-38 | 130 |
| Msa0253450 | AT1G10360.1 | 42.604 | 169 | 86 | 4 | 2 | 159 | 49 | 217 | 6.69e-37 | 127 |
| Msa0253450 | AT3G09270.1 | 43.210 | 162 | 83 | 3 | 2 | 156 | 51 | 210 | 7.85e-37 | 127 |
| Msa0253450 | AT1G59700.1 | 41.279 | 172 | 90 | 4 | 2 | 162 | 51 | 222 | 4.65e-34 | 120 |
| Msa0253450 | AT1G10370.1 | 41.420 | 169 | 88 | 4 | 2 | 159 | 49 | 217 | 1.18e-32 | 116 |
| Msa0253450 | AT1G59670.1 | 39.412 | 170 | 92 | 5 | 2 | 160 | 51 | 220 | 6.85e-31 | 112 |
| Msa0253450 | AT1G27140.1 | 37.278 | 169 | 96 | 3 | 2 | 160 | 53 | 221 | 2.47e-30 | 110 |
| Msa0253450 | AT5G62480.1 | 39.429 | 175 | 87 | 6 | 2 | 160 | 52 | 223 | 3.49e-30 | 110 |
| Msa0253450 | AT1G69930.1 | 39.286 | 168 | 92 | 5 | 2 | 159 | 56 | 223 | 1.70e-29 | 108 |
| Msa0253450 | AT2G29490.1 | 36.527 | 167 | 93 | 6 | 1 | 158 | 50 | 212 | 3.11e-29 | 107 |
| Msa0253450 | AT2G29440.1 | 36.364 | 176 | 99 | 6 | 1 | 167 | 49 | 220 | 1.12e-28 | 106 |
| Msa0253450 | AT1G74590.1 | 36.129 | 155 | 90 | 3 | 1 | 146 | 50 | 204 | 1.27e-28 | 106 |
| Msa0253450 | AT1G27130.1 | 35.714 | 168 | 98 | 3 | 2 | 159 | 52 | 219 | 1.58e-28 | 105 |
| Msa0253450 | AT2G29480.1 | 36.527 | 167 | 93 | 6 | 1 | 158 | 50 | 212 | 5.55e-28 | 104 |
| Msa0253450 | AT2G29470.1 | 33.333 | 174 | 107 | 5 | 1 | 167 | 51 | 222 | 2.56e-27 | 102 |
| Msa0253450 | AT2G29450.1 | 38.365 | 159 | 88 | 6 | 1 | 151 | 49 | 205 | 4.26e-27 | 102 |
| Msa0253450 | AT2G29460.1 | 34.659 | 176 | 102 | 6 | 1 | 167 | 50 | 221 | 4.31e-27 | 102 |
| Msa0253450 | AT1G69920.1 | 34.444 | 180 | 101 | 5 | 2 | 169 | 80 | 254 | 5.78e-25 | 97.4 |
| Msa0253450 | AT5G62480.3 | 30.286 | 175 | 76 | 7 | 2 | 160 | 52 | 196 | 2.03e-12 | 63.2 |
Find 47 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGGAGACAAGGCTTATTT+TGG | 0.162898 | 2_2:-45290978 | Msa0253450:CDS |
| AGAGAGCACAAGCTAGATTT+TGG | 0.186476 | 2_2:-45291740 | Msa0253450:CDS |
| ACTTAATGCCTAATTTCTTT+AGG | 0.190935 | 2_2:+45290757 | None:intergenic |
| CTTAATGCCTAATTTCTTTA+GGG | 0.237574 | 2_2:+45290758 | None:intergenic |
| CATATCTATGAATTCCTTCT+TGG | 0.269924 | 2_2:+45291022 | None:intergenic |
| TTTGAAACATATGAGAAGTT+TGG | 0.284132 | 2_2:-45290903 | Msa0253450:CDS |
| ATTACAAGTGACTCACAAAT+AGG | 0.297067 | 2_2:+45291825 | None:intergenic |
| AGTTCATTGAATGGGCTAAT+AGG | 0.359818 | 2_2:-45290851 | Msa0253450:CDS |
| CATAGATATGCTCAAATTGT+TGG | 0.364566 | 2_2:-45291009 | Msa0253450:CDS |
| AAGCTGGAAGGAAAGTTTAT+AGG | 0.375912 | 2_2:-45291073 | Msa0253450:CDS |
| GCAGATGCCCTAAAGAAATT+AGG | 0.402688 | 2_2:-45290765 | Msa0253450:CDS |
| TTGCCATTGTGGATTAGAAC+CGG | 0.405758 | 2_2:+45291849 | None:intergenic |
| CACAAATAGGTTTGCCATTG+TGG | 0.406278 | 2_2:+45291838 | None:intergenic |
| ATTAGCCCATTCAATGAACT+TGG | 0.407359 | 2_2:+45290854 | None:intergenic |
| AAAATCTAGCTTGTGCTCTC+TGG | 0.411980 | 2_2:+45291742 | None:intergenic |
| TCGTAGACCTTATGCTGGTT+AGG | 0.419263 | 2_2:+45290795 | None:intergenic |
| TTGAGTATATTGATGAGGTT+TGG | 0.428745 | 2_2:-45291800 | Msa0253450:CDS |
| TGGAGGAGACAGACTTGGTT+TGG | 0.440850 | 2_2:-45290958 | Msa0253450:CDS |
| GGCACTCAATCTCTATATTG+AGG | 0.449276 | 2_2:+45290877 | None:intergenic |
| GTTTCAAACCAACTGTAGAA+TGG | 0.455904 | 2_2:+45290918 | None:intergenic |
| TTTCAAACCAACTGTAGAAT+GGG | 0.460044 | 2_2:+45290919 | None:intergenic |
| CAAATTGTTGGAGAAACAGC+TGG | 0.465628 | 2_2:-45290997 | Msa0253450:CDS |
| CCCTAGTCCCATTCTACAGT+TGG | 0.473896 | 2_2:-45290926 | Msa0253450:CDS |
| GTGCCCCAAGTTCATTGAAT+GGG | 0.489598 | 2_2:-45290859 | Msa0253450:CDS |
| GTCTCTTCCTAACCAGCATA+AGG | 0.491160 | 2_2:-45290802 | Msa0253450:CDS |
| AGTGCCCCAAGTTCATTGAA+TGG | 0.509213 | 2_2:-45290860 | Msa0253450:CDS |
| TTAGCCCATTCAATGAACTT+GGG | 0.515536 | 2_2:+45290855 | None:intergenic |
| CTAGCTTGTGCTCTCTGGTA+GGG | 0.530129 | 2_2:+45291747 | None:intergenic |
| AGAACAAGAAGCTGCCAAGA+AGG | 0.534444 | 2_2:-45291036 | Msa0253450:CDS |
| TGTCAATAGATATATGAAGC+TGG | 0.543339 | 2_2:-45291089 | Msa0253450:intron |
| GTATATTGATGAGGTTTGGA+AGG | 0.548215 | 2_2:-45291796 | Msa0253450:CDS |
| TGCCATTGTGGATTAGAACC+GGG | 0.551246 | 2_2:+45291850 | None:intergenic |
| TCTAGCTTGTGCTCTCTGGT+AGG | 0.552026 | 2_2:+45291746 | None:intergenic |
| TAGCCCATTCAATGAACTTG+GGG | 0.580169 | 2_2:+45290856 | None:intergenic |
| CCCGGTTCACAAGAAAATCC+CGG | 0.589293 | 2_2:-45291868 | Msa0253450:CDS |
| GGAGAAACAGCTGGGAGACA+AGG | 0.589733 | 2_2:-45290988 | Msa0253450:CDS |
| AATAGATATATGAAGCTGGA+AGG | 0.589985 | 2_2:-45291085 | Msa0253450:intron |
| CCAACTGTAGAATGGGACTA+GGG | 0.601552 | 2_2:+45290926 | None:intergenic |
| GCTCTCTGGTAGGGATCAGA+AGG | 0.603013 | 2_2:+45291756 | None:intergenic |
| ATGCTGGTTAGGAAGAGACT+TGG | 0.605348 | 2_2:+45290806 | None:intergenic |
| ACCAACTGTAGAATGGGACT+AGG | 0.615269 | 2_2:+45290925 | None:intergenic |
| TGAACTCGTAGACCTTATGC+TGG | 0.626524 | 2_2:+45290790 | None:intergenic |
| AAATTGTTGGAGAAACAGCT+GGG | 0.647590 | 2_2:-45290996 | Msa0253450:CDS |
| TTATCTTCTACAAATGAACC+CGG | 0.663975 | 2_2:-45291886 | None:intergenic |
| AATTGTTGAGTATATTGATG+AGG | 0.670411 | 2_2:-45291805 | Msa0253450:CDS |
| TAGGGATCAGAAGGCAACAA+CGG | 0.683708 | 2_2:+45291765 | None:intergenic |
| ATCCCGGTTCTAATCCACAA+TGG | 0.688019 | 2_2:-45291852 | Msa0253450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATCAATTTTGATATTTAAT+TGG | - | chr2_2:45291066-45291085 | Msa0253450:CDS | 10.0% |
| !! | AAGAAACAAATAATAAATAT+TGG | + | chr2_2:45291182-45291201 | None:intergenic | 10.0% |
| !!! | TTTCTTTAATTTTTTTAAAG+AGG | - | chr2_2:45291196-45291215 | Msa0253450:intron | 10.0% |
| !!! | TATCAATTTTGATATTTAAT+TGG | - | chr2_2:45291066-45291085 | Msa0253450:CDS | 10.0% |
| !! | AAGAAACAAATAATAAATAT+TGG | + | chr2_2:45291182-45291201 | None:intergenic | 10.0% |
| !!! | TTTCTTTAATTTTTTTAAAG+AGG | - | chr2_2:45291196-45291215 | Msa0253450:intron | 10.0% |
| !! | AACAAATAATAAATATTGGA+TGG | + | chr2_2:45291178-45291197 | None:intergenic | 15.0% |
| !!! | TTTAATTTTTTTAAAGAGGA+AGG | - | chr2_2:45291200-45291219 | Msa0253450:intron | 15.0% |
| !! | AACAAATAATAAATATTGGA+TGG | + | chr2_2:45291178-45291197 | None:intergenic | 15.0% |
| !!! | TTTAATTTTTTTAAAGAGGA+AGG | - | chr2_2:45291200-45291219 | Msa0253450:intron | 15.0% |
| !! | AATGTAATTTGATATTGAGT+AGG | + | chr2_2:45291350-45291369 | None:intergenic | 20.0% |
| !! | TACTCAATATCAAATTACAT+TGG | - | chr2_2:45291349-45291368 | Msa0253450:intron | 20.0% |
| !! | AATGTAATTTGATATTGAGT+AGG | + | chr2_2:45291350-45291369 | None:intergenic | 20.0% |
| !! | TACTCAATATCAAATTACAT+TGG | - | chr2_2:45291349-45291368 | Msa0253450:intron | 20.0% |
| ! | AATTGTTGAGTATATTGATG+AGG | - | chr2_2:45290823-45290842 | Msa0253450:CDS | 25.0% |
| ! | GATATTTAATTGGTTGAGTT+AGG | - | chr2_2:45291076-45291095 | Msa0253450:CDS | 25.0% |
| !! | CTTTCATCAATCTCTATTTT+AGG | - | chr2_2:45291140-45291159 | Msa0253450:intron | 25.0% |
| !!! | TCAATCTCTATTTTAGGTTT+TGG | - | chr2_2:45291146-45291165 | Msa0253450:intron | 25.0% |
| ! | TGTAGGCAAAAATAAGTTAT+TGG | + | chr2_2:45291305-45291324 | None:intergenic | 25.0% |
| !! | ATTTTTGCCTACATATTGAA+TGG | - | chr2_2:45291312-45291331 | Msa0253450:intron | 25.0% |
| !! | TTTTTGCCTACATATTGAAT+GGG | - | chr2_2:45291313-45291332 | Msa0253450:intron | 25.0% |
| !!! | TGTTGTTTCCAACTAATTTT+GGG | - | chr2_2:45291503-45291522 | Msa0253450:intron | 25.0% |
| ! | AATTAACACCCAAAATTAGT+TGG | + | chr2_2:45291514-45291533 | None:intergenic | 25.0% |
| ! | AAAGTTTATAGGACCAAAAA+AGG | - | chr2_2:45291566-45291585 | Msa0253450:intron | 25.0% |
| !! | TTTGAAACATATGAGAAGTT+TGG | - | chr2_2:45291725-45291744 | Msa0253450:intron | 25.0% |
| ! | CTTAATGCCTAATTTCTTTA+GGG | + | chr2_2:45291873-45291892 | None:intergenic | 25.0% |
| ! | ACTTAATGCCTAATTTCTTT+AGG | + | chr2_2:45291874-45291893 | None:intergenic | 25.0% |
| ! | AATTGTTGAGTATATTGATG+AGG | - | chr2_2:45290823-45290842 | Msa0253450:CDS | 25.0% |
| ! | GATATTTAATTGGTTGAGTT+AGG | - | chr2_2:45291076-45291095 | Msa0253450:CDS | 25.0% |
| !! | CTTTCATCAATCTCTATTTT+AGG | - | chr2_2:45291140-45291159 | Msa0253450:intron | 25.0% |
| !!! | TCAATCTCTATTTTAGGTTT+TGG | - | chr2_2:45291146-45291165 | Msa0253450:intron | 25.0% |
| ! | TGTAGGCAAAAATAAGTTAT+TGG | + | chr2_2:45291305-45291324 | None:intergenic | 25.0% |
| !! | ATTTTTGCCTACATATTGAA+TGG | - | chr2_2:45291312-45291331 | Msa0253450:intron | 25.0% |
| !! | TTTTTGCCTACATATTGAAT+GGG | - | chr2_2:45291313-45291332 | Msa0253450:intron | 25.0% |
| !!! | TGTTGTTTCCAACTAATTTT+GGG | - | chr2_2:45291503-45291522 | Msa0253450:intron | 25.0% |
| ! | AATTAACACCCAAAATTAGT+TGG | + | chr2_2:45291514-45291533 | None:intergenic | 25.0% |
| ! | AAAGTTTATAGGACCAAAAA+AGG | - | chr2_2:45291566-45291585 | Msa0253450:intron | 25.0% |
| !! | TTTGAAACATATGAGAAGTT+TGG | - | chr2_2:45291725-45291744 | Msa0253450:intron | 25.0% |
| ! | CTTAATGCCTAATTTCTTTA+GGG | + | chr2_2:45291873-45291892 | None:intergenic | 25.0% |
| ! | ACTTAATGCCTAATTTCTTT+AGG | + | chr2_2:45291874-45291893 | None:intergenic | 25.0% |
| ATTACAAGTGACTCACAAAT+AGG | + | chr2_2:45290806-45290825 | None:intergenic | 30.0% | |
| TTGAGTATATTGATGAGGTT+TGG | - | chr2_2:45290828-45290847 | Msa0253450:CDS | 30.0% | |
| GAGAAGACATCAAATTACAT+TGG | - | chr2_2:45291257-45291276 | Msa0253450:intron | 30.0% | |
| ATTAGACCCATTCAATATGT+AGG | + | chr2_2:45291322-45291341 | None:intergenic | 30.0% | |
| CATATTGAATGGGTCTAATA+TGG | - | chr2_2:45291323-45291342 | Msa0253450:intron | 30.0% | |
| !! | CCTTACTACTTTTAGTGAAA+TGG | + | chr2_2:45291445-45291464 | None:intergenic | 30.0% |
| CCATTTCACTAAAAGTAGTA+AGG | - | chr2_2:45291442-45291461 | Msa0253450:intron | 30.0% | |
| !!! | GTGTTGTTTCCAACTAATTT+TGG | - | chr2_2:45291502-45291521 | Msa0253450:intron | 30.0% |
| TGTCAATAGATATATGAAGC+TGG | - | chr2_2:45291539-45291558 | Msa0253450:intron | 30.0% | |
| AATAGATATATGAAGCTGGA+AGG | - | chr2_2:45291543-45291562 | Msa0253450:intron | 30.0% | |
| !!! | TTCTTGTTCTTCTCCTTTTT+TGG | + | chr2_2:45291582-45291601 | None:intergenic | 30.0% |
| CATATCTATGAATTCCTTCT+TGG | + | chr2_2:45291609-45291628 | None:intergenic | 30.0% | |
| CATAGATATGCTCAAATTGT+TGG | - | chr2_2:45291619-45291638 | Msa0253450:intron | 30.0% | |
| TTTCAAACCAACTGTAGAAT+GGG | + | chr2_2:45291712-45291731 | None:intergenic | 30.0% | |
| ATTACAAGTGACTCACAAAT+AGG | + | chr2_2:45290806-45290825 | None:intergenic | 30.0% | |
| TTGAGTATATTGATGAGGTT+TGG | - | chr2_2:45290828-45290847 | Msa0253450:CDS | 30.0% | |
| GAGAAGACATCAAATTACAT+TGG | - | chr2_2:45291257-45291276 | Msa0253450:intron | 30.0% | |
| ATTAGACCCATTCAATATGT+AGG | + | chr2_2:45291322-45291341 | None:intergenic | 30.0% | |
| CATATTGAATGGGTCTAATA+TGG | - | chr2_2:45291323-45291342 | Msa0253450:intron | 30.0% | |
| !! | CCTTACTACTTTTAGTGAAA+TGG | + | chr2_2:45291445-45291464 | None:intergenic | 30.0% |
| CCATTTCACTAAAAGTAGTA+AGG | - | chr2_2:45291442-45291461 | Msa0253450:intron | 30.0% | |
| !!! | GTGTTGTTTCCAACTAATTT+TGG | - | chr2_2:45291502-45291521 | Msa0253450:intron | 30.0% |
| TGTCAATAGATATATGAAGC+TGG | - | chr2_2:45291539-45291558 | Msa0253450:intron | 30.0% | |
| AATAGATATATGAAGCTGGA+AGG | - | chr2_2:45291543-45291562 | Msa0253450:intron | 30.0% | |
| !!! | TTCTTGTTCTTCTCCTTTTT+TGG | + | chr2_2:45291582-45291601 | None:intergenic | 30.0% |
| CATATCTATGAATTCCTTCT+TGG | + | chr2_2:45291609-45291628 | None:intergenic | 30.0% | |
| CATAGATATGCTCAAATTGT+TGG | - | chr2_2:45291619-45291638 | Msa0253450:intron | 30.0% | |
| TTTCAAACCAACTGTAGAAT+GGG | + | chr2_2:45291712-45291731 | None:intergenic | 30.0% | |
| GTATATTGATGAGGTTTGGA+AGG | - | chr2_2:45290832-45290851 | Msa0253450:CDS | 35.0% | |
| ! | GGCTGACTATGTTGATAAAA+CGG | - | chr2_2:45290910-45290929 | Msa0253450:CDS | 35.0% |
| TTGAAACTCACATACACAAG+TGG | - | chr2_2:45291016-45291035 | Msa0253450:CDS | 35.0% | |
| !!! | CTCTATTTTAGGTTTTGGTG+TGG | - | chr2_2:45291151-45291170 | Msa0253450:intron | 35.0% |
| AAGCTGGAAGGAAAGTTTAT+AGG | - | chr2_2:45291555-45291574 | Msa0253450:intron | 35.0% | |
| AAATTGTTGGAGAAACAGCT+GGG | - | chr2_2:45291632-45291651 | Msa0253450:intron | 35.0% | |
| GTTTCAAACCAACTGTAGAA+TGG | + | chr2_2:45291713-45291732 | None:intergenic | 35.0% | |
| TTAGCCCATTCAATGAACTT+GGG | + | chr2_2:45291776-45291795 | None:intergenic | 35.0% | |
| ATTAGCCCATTCAATGAACT+TGG | + | chr2_2:45291777-45291796 | None:intergenic | 35.0% | |
| !! | AGTTCATTGAATGGGCTAAT+AGG | - | chr2_2:45291777-45291796 | Msa0253450:CDS | 35.0% |
| GTATATTGATGAGGTTTGGA+AGG | - | chr2_2:45290832-45290851 | Msa0253450:CDS | 35.0% | |
| ! | GGCTGACTATGTTGATAAAA+CGG | - | chr2_2:45290910-45290929 | Msa0253450:CDS | 35.0% |
| TTGAAACTCACATACACAAG+TGG | - | chr2_2:45291016-45291035 | Msa0253450:CDS | 35.0% | |
| !!! | CTCTATTTTAGGTTTTGGTG+TGG | - | chr2_2:45291151-45291170 | Msa0253450:intron | 35.0% |
| AAGCTGGAAGGAAAGTTTAT+AGG | - | chr2_2:45291555-45291574 | Msa0253450:intron | 35.0% | |
| AAATTGTTGGAGAAACAGCT+GGG | - | chr2_2:45291632-45291651 | Msa0253450:intron | 35.0% | |
| GTTTCAAACCAACTGTAGAA+TGG | + | chr2_2:45291713-45291732 | None:intergenic | 35.0% | |
| TTAGCCCATTCAATGAACTT+GGG | + | chr2_2:45291776-45291795 | None:intergenic | 35.0% | |
| ATTAGCCCATTCAATGAACT+TGG | + | chr2_2:45291777-45291796 | None:intergenic | 35.0% | |
| !! | AGTTCATTGAATGGGCTAAT+AGG | - | chr2_2:45291777-45291796 | Msa0253450:CDS | 35.0% |
| !! | TTGCCATTGTGGATTAGAAC+CGG | + | chr2_2:45290782-45290801 | None:intergenic | 40.0% |
| CACAAATAGGTTTGCCATTG+TGG | + | chr2_2:45290793-45290812 | None:intergenic | 40.0% | |
| ! | AAAATCTAGCTTGTGCTCTC+TGG | + | chr2_2:45290889-45290908 | None:intergenic | 40.0% |
| !! | AGAGAGCACAAGCTAGATTT+TGG | - | chr2_2:45290888-45290907 | Msa0253450:CDS | 40.0% |
| !! | GAGAGCACAAGCTAGATTTT+GGG | - | chr2_2:45290889-45290908 | Msa0253450:CDS | 40.0% |
| AACTCACATACACAAGTGGA+AGG | - | chr2_2:45291020-45291039 | Msa0253450:CDS | 40.0% | |
| CAAATTGTTGGAGAAACAGC+TGG | - | chr2_2:45291631-45291650 | Msa0253450:intron | 40.0% | |
| !! | TATTTTGGAGGAGACAGACT+TGG | - | chr2_2:45291665-45291684 | Msa0253450:intron | 40.0% |
| GGCACTCAATCTCTATATTG+AGG | + | chr2_2:45291754-45291773 | None:intergenic | 40.0% | |
| TAGCCCATTCAATGAACTTG+GGG | + | chr2_2:45291775-45291794 | None:intergenic | 40.0% | |
| GCAGATGCCCTAAAGAAATT+AGG | - | chr2_2:45291863-45291882 | Msa0253450:CDS | 40.0% | |
| !! | TTGCCATTGTGGATTAGAAC+CGG | + | chr2_2:45290782-45290801 | None:intergenic | 40.0% |
| CACAAATAGGTTTGCCATTG+TGG | + | chr2_2:45290793-45290812 | None:intergenic | 40.0% | |
| ! | AAAATCTAGCTTGTGCTCTC+TGG | + | chr2_2:45290889-45290908 | None:intergenic | 40.0% |
| !! | AGAGAGCACAAGCTAGATTT+TGG | - | chr2_2:45290888-45290907 | Msa0253450:CDS | 40.0% |
| !! | GAGAGCACAAGCTAGATTTT+GGG | - | chr2_2:45290889-45290908 | Msa0253450:CDS | 40.0% |
| AACTCACATACACAAGTGGA+AGG | - | chr2_2:45291020-45291039 | Msa0253450:CDS | 40.0% | |
| CAAATTGTTGGAGAAACAGC+TGG | - | chr2_2:45291631-45291650 | Msa0253450:intron | 40.0% | |
| !! | TATTTTGGAGGAGACAGACT+TGG | - | chr2_2:45291665-45291684 | Msa0253450:intron | 40.0% |
| GGCACTCAATCTCTATATTG+AGG | + | chr2_2:45291754-45291773 | None:intergenic | 40.0% | |
| TAGCCCATTCAATGAACTTG+GGG | + | chr2_2:45291775-45291794 | None:intergenic | 40.0% | |
| GCAGATGCCCTAAAGAAATT+AGG | - | chr2_2:45291863-45291882 | Msa0253450:CDS | 40.0% | |
| ! | ACCGGGATTTTCTTGTGAAC+CGG | + | chr2_2:45290764-45290783 | None:intergenic | 45.0% |
| ! | ATCCCGGTTCTAATCCACAA+TGG | - | chr2_2:45290776-45290795 | Msa0253450:CDS | 45.0% |
| !! | TGCCATTGTGGATTAGAACC+GGG | + | chr2_2:45290781-45290800 | None:intergenic | 45.0% |
| TAGGGATCAGAAGGCAACAA+CGG | + | chr2_2:45290866-45290885 | None:intergenic | 45.0% | |
| CACATACACAAGTGGAAGGA+CGG | - | chr2_2:45291024-45291043 | Msa0253450:CDS | 45.0% | |
| ACATACACAAGTGGAAGGAC+GGG | - | chr2_2:45291025-45291044 | Msa0253450:CDS | 45.0% | |
| AGAACAAGAAGCTGCCAAGA+AGG | - | chr2_2:45291592-45291611 | Msa0253450:intron | 45.0% | |
| ! | CTGGGAGACAAGGCTTATTT+TGG | - | chr2_2:45291650-45291669 | Msa0253450:intron | 45.0% |
| !!! | GGAGACAAGGCTTATTTTGG+AGG | - | chr2_2:45291653-45291672 | Msa0253450:intron | 45.0% |
| CCAACTGTAGAATGGGACTA+GGG | + | chr2_2:45291705-45291724 | None:intergenic | 45.0% | |
| ACCAACTGTAGAATGGGACT+AGG | + | chr2_2:45291706-45291725 | None:intergenic | 45.0% | |
| AGTGCCCCAAGTTCATTGAA+TGG | - | chr2_2:45291768-45291787 | Msa0253450:CDS | 45.0% | |
| GTGCCCCAAGTTCATTGAAT+GGG | - | chr2_2:45291769-45291788 | Msa0253450:CDS | 45.0% | |
| ! | ATGCTGGTTAGGAAGAGACT+TGG | + | chr2_2:45291825-45291844 | None:intergenic | 45.0% |
| GTCTCTTCCTAACCAGCATA+AGG | - | chr2_2:45291826-45291845 | Msa0253450:CDS | 45.0% | |
| ! | TCGTAGACCTTATGCTGGTT+AGG | + | chr2_2:45291836-45291855 | None:intergenic | 45.0% |
| TGAACTCGTAGACCTTATGC+TGG | + | chr2_2:45291841-45291860 | None:intergenic | 45.0% | |
| ! | ACCGGGATTTTCTTGTGAAC+CGG | + | chr2_2:45290764-45290783 | None:intergenic | 45.0% |
| ! | ATCCCGGTTCTAATCCACAA+TGG | - | chr2_2:45290776-45290795 | Msa0253450:CDS | 45.0% |
| !! | TGCCATTGTGGATTAGAACC+GGG | + | chr2_2:45290781-45290800 | None:intergenic | 45.0% |
| TAGGGATCAGAAGGCAACAA+CGG | + | chr2_2:45290866-45290885 | None:intergenic | 45.0% | |
| CACATACACAAGTGGAAGGA+CGG | - | chr2_2:45291024-45291043 | Msa0253450:CDS | 45.0% | |
| ACATACACAAGTGGAAGGAC+GGG | - | chr2_2:45291025-45291044 | Msa0253450:CDS | 45.0% | |
| AGAACAAGAAGCTGCCAAGA+AGG | - | chr2_2:45291592-45291611 | Msa0253450:intron | 45.0% | |
| ! | CTGGGAGACAAGGCTTATTT+TGG | - | chr2_2:45291650-45291669 | Msa0253450:intron | 45.0% |
| !!! | GGAGACAAGGCTTATTTTGG+AGG | - | chr2_2:45291653-45291672 | Msa0253450:intron | 45.0% |
| CCAACTGTAGAATGGGACTA+GGG | + | chr2_2:45291705-45291724 | None:intergenic | 45.0% | |
| ACCAACTGTAGAATGGGACT+AGG | + | chr2_2:45291706-45291725 | None:intergenic | 45.0% | |
| AGTGCCCCAAGTTCATTGAA+TGG | - | chr2_2:45291768-45291787 | Msa0253450:CDS | 45.0% | |
| GTGCCCCAAGTTCATTGAAT+GGG | - | chr2_2:45291769-45291788 | Msa0253450:CDS | 45.0% | |
| ! | ATGCTGGTTAGGAAGAGACT+TGG | + | chr2_2:45291825-45291844 | None:intergenic | 45.0% |
| GTCTCTTCCTAACCAGCATA+AGG | - | chr2_2:45291826-45291845 | Msa0253450:CDS | 45.0% | |
| ! | TCGTAGACCTTATGCTGGTT+AGG | + | chr2_2:45291836-45291855 | None:intergenic | 45.0% |
| TGAACTCGTAGACCTTATGC+TGG | + | chr2_2:45291841-45291860 | None:intergenic | 45.0% | |
| ! | CCGGGATTTTCTTGTGAACC+GGG | + | chr2_2:45290763-45290782 | None:intergenic | 50.0% |
| CCCGGTTCACAAGAAAATCC+CGG | - | chr2_2:45290760-45290779 | Msa0253450:CDS | 50.0% | |
| ! | CTAGCTTGTGCTCTCTGGTA+GGG | + | chr2_2:45290884-45290903 | None:intergenic | 50.0% |
| ! | TCTAGCTTGTGCTCTCTGGT+AGG | + | chr2_2:45290885-45290904 | None:intergenic | 50.0% |
| ! | TGGAGGAGACAGACTTGGTT+TGG | - | chr2_2:45291670-45291689 | Msa0253450:intron | 50.0% |
| CCCTAGTCCCATTCTACAGT+TGG | - | chr2_2:45291702-45291721 | Msa0253450:intron | 50.0% | |
| ! | CCGGGATTTTCTTGTGAACC+GGG | + | chr2_2:45290763-45290782 | None:intergenic | 50.0% |
| CCCGGTTCACAAGAAAATCC+CGG | - | chr2_2:45290760-45290779 | Msa0253450:CDS | 50.0% | |
| ! | CTAGCTTGTGCTCTCTGGTA+GGG | + | chr2_2:45290884-45290903 | None:intergenic | 50.0% |
| ! | TCTAGCTTGTGCTCTCTGGT+AGG | + | chr2_2:45290885-45290904 | None:intergenic | 50.0% |
| ! | TGGAGGAGACAGACTTGGTT+TGG | - | chr2_2:45291670-45291689 | Msa0253450:intron | 50.0% |
| CCCTAGTCCCATTCTACAGT+TGG | - | chr2_2:45291702-45291721 | Msa0253450:intron | 50.0% | |
| GCTCTCTGGTAGGGATCAGA+AGG | + | chr2_2:45290875-45290894 | None:intergenic | 55.0% | |
| TACACAAGTGGAAGGACGGG+TGG | - | chr2_2:45291028-45291047 | Msa0253450:CDS | 55.0% | |
| GGAGAAACAGCTGGGAGACA+AGG | - | chr2_2:45291640-45291659 | Msa0253450:intron | 55.0% | |
| GCTCTCTGGTAGGGATCAGA+AGG | + | chr2_2:45290875-45290894 | None:intergenic | 55.0% | |
| TACACAAGTGGAAGGACGGG+TGG | - | chr2_2:45291028-45291047 | Msa0253450:CDS | 55.0% | |
| GGAGAAACAGCTGGGAGACA+AGG | - | chr2_2:45291640-45291659 | Msa0253450:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 45290755 | 45291895 | 45290755 | ID=Msa0253450;Name=Msa0253450 |
| chr2_2 | mRNA | 45290755 | 45291895 | 45290755 | ID=Msa0253450-mRNA-1;Parent=Msa0253450;Name=Msa0253450-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|0|0|1|1|1|2|0|170 |
| chr2_2 | exon | 45291731 | 45291895 | 45291731 | ID=Msa0253450-mRNA-1:exon:13992;Parent=Msa0253450-mRNA-1 |
| chr2_2 | exon | 45290755 | 45291102 | 45290755 | ID=Msa0253450-mRNA-1:exon:13991;Parent=Msa0253450-mRNA-1 |
| chr2_2 | CDS | 45291731 | 45291895 | 45291731 | ID=Msa0253450-mRNA-1:cds;Parent=Msa0253450-mRNA-1 |
| chr2_2 | CDS | 45290755 | 45291102 | 45290755 | ID=Msa0253450-mRNA-1:cds;Parent=Msa0253450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
