AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0235120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0235120 MtrunA17_Chr2g0283581 97.778 360 8 0 1 360 1 360 0.0 732
Msa0235120 MtrunA17_Chr4g0045951 70.765 366 99 4 1 360 1 364 0.0 536
Msa0235120 MtrunA17_Chr4g0045941 69.101 356 101 2 6 360 5 352 0.0 518
Msa0235120 MtrunA17_Chr2g0325481 64.087 323 114 2 38 359 46 367 4.41e-160 453
Msa0235120 MtrunA17_Chr4g0041011 59.155 355 139 4 7 358 12 363 4.82e-155 440
Msa0235120 MtrunA17_Chr3g0097891 56.056 355 146 4 7 358 3 350 2.01e-146 417
Msa0235120 MtrunA17_Chr2g0314801 56.918 318 133 3 42 355 33 350 4.85e-137 394
Msa0235120 MtrunA17_Chr3g0085071 55.486 319 139 3 42 358 46 363 1.30e-132 383
Msa0235120 MtrunA17_Chr5g0413851 53.846 351 155 5 12 358 12 359 4.81e-132 381
Msa0235120 MtrunA17_Chr3g0091031 54.658 322 143 3 39 358 28 348 8.17e-131 378
Msa0235120 MtrunA17_Chr3g0085081 54.294 326 146 3 35 358 24 348 1.68e-129 374
Msa0235120 MtrunA17_Chr5g0430371 52.326 344 137 6 42 359 58 400 3.05e-125 365
Msa0235120 MtrunA17_Chr3g0105301 52.239 335 143 5 42 359 43 377 2.10e-124 363
Msa0235120 MtrunA17_Chr2g0314791 47.472 356 160 9 15 358 5 345 8.91e-112 329
Msa0235120 MtrunA17_Chr1g0171171 42.781 374 186 9 6 358 9 375 2.94e-98 296
Msa0235120 MtrunA17_Chr1g0210771 42.296 331 170 6 42 358 59 382 5.19e-96 290
Msa0235120 MtrunA17_Chr7g0258851 42.274 343 173 6 42 360 248 589 9.32e-96 296
Msa0235120 MtrunA17_Chr1g0175671 40.233 343 180 6 42 360 170 511 6.81e-94 290
Msa0235120 MtrunA17_Chr4g0068111 38.144 388 205 9 5 358 67 453 3.18e-91 281
Msa0235120 MtrunA17_Chr1g0213281 39.884 346 182 8 38 358 171 515 4.23e-87 272
Msa0235120 MtrunA17_Chr5g0413271 38.393 336 184 6 42 358 145 476 1.25e-85 267
Msa0235120 MtrunA17_Chr8g0368461 39.155 355 174 8 42 358 178 528 5.30e-84 265
Msa0235120 MtrunA17_Chr4g0071391 37.243 341 191 7 42 360 109 448 8.75e-84 261
Msa0235120 MtrunA17_Chr7g0269991 39.339 333 184 7 42 358 137 467 1.02e-80 254
Msa0235120 MtrunA17_Chr4g0006991 37.101 345 186 9 42 358 86 427 1.67e-77 244
Msa0235120 MtrunA17_Chr3g0113671 37.500 344 188 9 42 358 106 449 5.77e-77 244
Msa0235120 MtrunA17_Chr5g0437291 36.888 347 189 9 42 358 165 511 3.88e-74 238
Msa0235120 MtrunA17_Chr8g0360521 36.340 388 210 10 5 359 27 410 1.25e-73 234
Msa0235120 MtrunA17_Chr3g0114101 36.628 344 191 9 42 359 89 431 1.29e-73 234
Msa0235120 MtrunA17_Chr1g0209921 49.351 231 109 6 37 262 39 266 8.57e-73 227
Msa0235120 MtrunA17_Chr3g0126021 38.261 345 187 9 34 358 121 459 9.66e-71 228
Msa0235120 MtrunA17_Chr5g0437601 34.837 399 212 11 9 359 27 425 6.45e-70 225
Msa0235120 MtrunA17_Chr2g0287901 34.540 359 207 6 22 356 81 435 1.91e-68 222
Msa0235120 MtrunA17_Chr4g0005491 34.582 347 198 10 42 359 62 408 2.84e-66 215
Msa0235120 MtrunA17_Chr7g0259711 36.023 347 193 9 39 358 88 432 6.39e-66 215
Msa0235120 MtrunA17_Chr7g0242701 34.393 346 200 9 39 358 83 427 1.20e-64 211
Msa0235120 MtrunA17_Chr4g0005481 33.811 349 203 9 35 358 101 446 1.96e-64 211
Msa0235120 MtrunA17_Chr8g0384151 31.335 367 229 7 8 359 59 417 9.45e-63 206
Msa0235120 MtrunA17_Chr7g0243301 31.675 382 230 11 7 359 31 410 2.95e-62 204
Msa0235120 MtrunA17_Chr1g0178081 30.311 386 183 10 5 358 10 341 1.98e-52 177
Msa0235120 MtrunA17_Chr2g0283851 30.194 361 212 13 35 360 48 403 9.23e-40 145
Msa0235120 MtrunA17_Chr4g0049421 28.986 345 209 11 42 354 48 388 4.80e-39 143
Msa0235120 MtrunA17_Chr6g0456691 30.352 369 216 11 26 360 60 421 1.19e-38 142
Msa0235120 MtrunA17_Chr8g0384421 31.503 346 206 13 40 358 131 472 2.19e-37 140
Msa0235120 MtrunA17_Chr6g0476041 29.155 367 199 12 38 358 163 514 2.76e-37 140
Msa0235120 MtrunA17_Chr8g0347321 29.396 364 216 13 27 358 85 439 2.24e-36 137
Msa0235120 MtrunA17_Chr1g0188191 31.180 356 198 15 38 354 230 577 2.39e-36 139
Msa0235120 MtrunA17_Chr3g0085101 53.636 110 50 1 225 333 1 110 5.74e-36 127
Msa0235120 MtrunA17_Chr6g0456681 29.752 363 194 13 41 360 63 407 8.40e-36 135
Msa0235120 MtrunA17_Chr5g0414061 30.362 359 210 14 34 358 86 438 2.09e-35 134
Msa0235120 MtrunA17_Chr4g0070341 30.460 348 205 13 41 358 131 471 4.69e-34 130
Msa0235120 MtrunA17_Chr6g0455901 30.000 370 216 16 25 358 54 416 8.78e-34 129
Msa0235120 MtrunA17_Chr5g0414091 30.372 349 209 13 42 358 85 431 4.75e-33 127
Msa0235120 MtrunA17_Chr3g0140371 28.857 350 213 12 40 358 16 360 5.27e-33 126
Msa0235120 MtrunA17_Chr6g0451321 27.793 367 231 11 22 358 95 457 3.37e-32 125
Msa0235120 MtrunA17_Chr5g0414051 27.989 368 216 14 30 358 63 420 5.65e-30 119
Msa0235120 MtrunA17_Chr7g0226991 28.771 358 218 11 34 358 49 402 5.93e-30 118
Msa0235120 MtrunA17_Chr8g0387921 27.273 352 219 12 36 354 68 415 1.08e-27 112
Msa0235120 MtrunA17_Chr8g0391481 26.648 364 230 11 28 358 13 372 2.04e-27 111
Msa0235120 MtrunA17_Chr5g0414041 28.448 348 217 12 42 358 87 433 4.95e-27 110
Msa0235120 MtrunA17_Chr7g0221271 33.333 189 94 6 6 167 22 205 1.70e-21 91.3
Msa0235120 MtrunA17_Chr7g0221291 46.067 89 47 1 42 129 79 167 3.01e-21 89.7
Msa0235120 MtrunA17_Chr1g0209931 50.000 88 40 2 272 358 8 92 8.37e-21 86.3
Msa0235120 MtrunA17_Chr5g0429211 50.602 83 40 1 87 169 187 268 1.61e-19 87.4
Msa0235120 MtrunA17_Chr2g0287931 32.000 125 71 2 101 211 2 126 3.86e-15 71.2
Msa0235120 MtrunA17_Chr5g0429191 57.778 45 10 1 316 351 1 45 8.89e-11 56.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0235120 AT1G29050.1 73.353 334 86 3 29 360 48 380 0.0 526
Msa0235120 AT2G34070.1 69.970 333 94 5 31 360 56 385 4.11e-179 502
Msa0235120 AT2G42570.1 61.774 327 124 1 34 359 39 365 3.07e-158 448
Msa0235120 AT2G31110.2 58.592 355 136 3 9 358 14 362 4.61e-153 435
Msa0235120 AT2G34070.2 71.032 252 70 3 111 360 1 251 1.32e-134 384
Msa0235120 AT3G14850.2 54.658 322 142 3 38 355 30 351 4.03e-130 377
Msa0235120 AT2G30900.1 50.549 364 168 8 2 359 9 366 1.66e-127 370
Msa0235120 AT1G78710.1 50.926 324 153 5 39 358 35 356 1.90e-123 360
Msa0235120 AT5G58600.1 50.149 335 149 6 42 358 66 400 2.15e-114 338
Msa0235120 AT2G30010.1 49.568 347 151 6 36 358 50 396 1.47e-111 331
Msa0235120 AT2G30010.2 49.568 347 151 6 36 358 93 439 1.93e-111 332
Msa0235120 AT2G31110.3 57.480 254 97 3 9 257 14 261 8.45e-103 304
Msa0235120 AT3G14850.1 54.032 248 111 2 111 355 1 248 9.67e-98 290
Msa0235120 AT2G31110.1 61.353 207 80 0 152 358 8 214 1.48e-95 283
Msa0235120 AT3G12060.1 42.857 343 171 7 42 360 196 537 1.34e-94 293
Msa0235120 AT3G54260.1 43.048 374 186 11 3 358 10 374 2.96e-94 286
Msa0235120 AT5G06700.1 41.570 344 176 6 41 360 254 596 3.74e-94 293
Msa0235120 AT1G78710.2 41.667 324 130 6 39 358 28 296 2.44e-87 266
Msa0235120 AT5G20590.1 39.359 343 184 8 41 360 140 481 6.24e-87 271
Msa0235120 AT3G62390.1 37.598 383 201 9 12 358 91 471 1.16e-86 270
Msa0235120 AT2G30900.2 50.965 259 118 6 2 257 9 261 2.95e-86 262
Msa0235120 AT5G49340.1 37.978 366 194 8 25 358 77 441 3.18e-86 268
Msa0235120 AT1G60790.1 39.244 344 181 9 42 358 190 532 9.14e-83 261
Msa0235120 AT5G58600.2 52.232 224 104 3 42 262 66 289 5.47e-81 249
Msa0235120 AT5G01360.2 36.000 375 210 9 12 358 6 378 9.84e-80 249
Msa0235120 AT5G01360.1 37.971 345 184 9 42 358 92 434 1.43e-78 248
Msa0235120 AT5G19160.1 38.040 347 186 6 39 356 96 442 5.20e-77 244
Msa0235120 AT3G11030.1 38.418 354 187 11 33 359 100 449 1.31e-74 238
Msa0235120 AT3G55990.1 35.756 344 194 8 42 358 140 483 1.49e-72 234
Msa0235120 AT1G73140.1 34.656 378 210 10 14 358 32 405 3.26e-72 231
Msa0235120 AT2G40150.1 34.943 352 196 8 40 358 69 420 1.30e-71 229
Msa0235120 AT3G06080.2 36.676 349 192 10 39 360 100 446 4.39e-71 229
Msa0235120 AT2G40160.1 34.384 349 197 9 42 360 77 423 2.68e-70 226
Msa0235120 AT2G40160.2 34.402 343 195 8 42 354 77 419 3.36e-70 226
Msa0235120 AT1G48880.1 35.674 356 206 7 20 359 92 440 7.87e-70 225
Msa0235120 AT2G40320.1 36.390 349 193 10 38 359 77 423 8.00e-70 225
Msa0235120 AT3G11570.1 33.504 391 222 10 3 358 32 419 1.93e-67 219
Msa0235120 AT5G06230.2 34.000 350 202 7 37 358 16 364 8.48e-67 215
Msa0235120 AT5G06230.1 34.000 350 202 7 37 358 57 405 1.38e-66 216
Msa0235120 AT2G38320.1 32.673 404 226 12 1 358 1 404 5.57e-66 214
Msa0235120 AT5G01620.2 33.333 342 201 9 42 358 110 449 4.31e-64 211
Msa0235120 AT5G01620.1 33.333 342 201 9 42 358 110 449 4.31e-64 211
Msa0235120 AT5G01620.3 33.333 342 201 9 42 358 118 457 5.06e-64 211
Msa0235120 AT3G62390.2 34.507 284 156 6 12 265 91 374 1.01e-56 191
Msa0235120 AT2G38320.2 32.704 318 187 7 68 358 4 321 1.95e-56 187
Msa0235120 AT5G19160.2 39.004 241 132 4 39 264 96 336 4.12e-56 187
Msa0235120 AT5G20590.2 39.331 239 130 6 41 264 140 378 1.12e-55 187
Msa0235120 AT2G40160.3 35.470 234 138 5 42 262 77 310 1.30e-48 166
Msa0235120 AT3G06080.1 35.270 241 141 4 39 264 100 340 2.14e-48 167
Msa0235120 AT5G06230.3 33.735 249 144 4 37 264 57 305 5.73e-44 154
Msa0235120 AT5G64470.3 30.398 352 211 11 34 354 42 390 6.79e-44 156
Msa0235120 AT5G64470.2 30.362 359 208 12 34 354 42 396 6.62e-43 154
Msa0235120 AT2G14530.1 30.280 393 229 14 6 359 21 407 1.64e-40 147
Msa0235120 AT1G01430.1 27.642 369 225 11 26 358 85 447 1.46e-37 140
Msa0235120 AT3G02440.2 29.745 353 201 11 42 358 135 476 1.74e-37 140
Msa0235120 AT3G02440.1 29.745 353 201 11 42 358 127 468 1.83e-37 140
Msa0235120 AT1G70230.1 30.286 350 194 15 42 358 79 411 6.71e-37 138
Msa0235120 AT5G64020.1 30.447 358 202 15 42 358 57 408 3.02e-36 136
Msa0235120 AT5G51640.1 29.487 390 220 15 16 358 107 488 8.76e-36 136
Msa0235120 AT4G25360.1 28.977 352 205 12 42 354 175 520 2.27e-35 135
Msa0235120 AT4G25360.2 28.977 352 205 12 42 354 175 520 2.27e-35 135
Msa0235120 AT5G15900.1 27.366 391 244 10 5 358 22 409 3.53e-34 130
Msa0235120 AT5G15900.2 27.366 391 244 10 5 358 41 428 3.65e-34 131
Msa0235120 AT2G37720.1 29.577 355 197 13 42 358 143 482 7.04e-34 130
Msa0235120 AT3G28150.1 29.648 398 213 16 5 358 36 410 4.99e-33 127
Msa0235120 AT5G20680.6 28.919 370 224 15 18 358 98 457 1.03e-32 127
Msa0235120 AT5G20680.4 28.919 370 224 15 18 358 192 551 2.12e-32 127
Msa0235120 AT5G20680.1 28.919 370 224 15 18 358 192 551 2.12e-32 127
Msa0235120 AT5G20680.3 28.919 370 224 15 18 358 192 551 2.12e-32 127
Msa0235120 AT5G20680.5 28.919 370 224 15 18 358 192 551 2.12e-32 127
Msa0235120 AT5G20680.2 28.919 370 224 15 18 358 174 533 2.14e-32 127
Msa0235120 AT5G15890.1 28.736 348 205 11 42 358 187 522 1.22e-31 125
Msa0235120 AT4G01080.1 27.714 350 212 13 37 354 86 426 7.12e-29 116
Msa0235120 AT4G11090.1 26.575 365 212 13 37 358 74 425 1.70e-27 112
Msa0235120 AT4G23790.1 26.634 413 234 18 7 358 23 427 2.69e-27 112
Msa0235120 AT5G64470.4 28.736 261 160 8 34 270 42 300 6.81e-26 106
Msa0235120 AT5G64470.1 28.736 261 160 8 34 270 42 300 8.75e-26 106

Find 108 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATATATATTAAGATTTA+AGG 0.107054 2_2:-7906626 Msa0235120:three_prime_UTR
ACTATACCGCACACCTTATT+TGG 0.110333 2_2:-7907903 Msa0235120:CDS
TTTGAATAAATGTTAGTTAT+TGG 0.156750 2_2:-7906377 Msa0235120:three_prime_UTR
GATTGACCACTTGGGCTAAA+TGG 0.217574 2_2:-7907180 Msa0235120:CDS
CGAATTATGTCAACCAAATA+AGG 0.257968 2_2:+7907890 None:intergenic
AAAATCAAGTGTAAAATTAT+AGG 0.261207 2_2:-7906599 Msa0235120:three_prime_UTR
GGACAACTTCAACCATTATC+AGG 0.281304 2_2:-7906923 Msa0235120:CDS
CCGTTTAGTGGCATACAATA+AGG 0.283673 2_2:-7907203 Msa0235120:CDS
CTTGGTGTGGTGGGTGATAT+TGG 0.287316 2_2:+7912615 None:intergenic
CATTCAAGGCAAATCTCAAA+TGG 0.321965 2_2:-7912529 Msa0235120:exon
TTGAAAGAAGACTTTAGTTT+TGG 0.332563 2_2:+7907135 None:intergenic
TTGTTCAATATGTTACTTGA+TGG 0.341330 2_2:+7906875 None:intergenic
AGTAATGTAAGTAGCTTAAG+AGG 0.341506 2_2:-7912435 Msa0235120:CDS
CTTGGTAAGGCACATGAATC+AGG 0.346575 2_2:+7912249 None:intergenic
GGGATTGTGACAAAGGGTTT+TGG 0.350841 2_2:+7912658 None:intergenic
AATGGGTGCAATTTGTTCAT+AGG 0.370881 2_2:-7912393 Msa0235120:CDS
AAAACTAAAGTCTTCTTTCA+AGG 0.374728 2_2:-7907133 Msa0235120:CDS
AGGAGTTGGTTCCAAGTATC+AGG 0.377013 2_2:+7906713 None:intergenic
TATTTGAGGTATTGTTTGTC+AGG 0.377428 2_2:+7912282 None:intergenic
GTAATATCAAGTAGATAAAC+TGG 0.378242 2_2:+7906830 None:intergenic
TTACTAAACAAAATAAGTTC+AGG 0.384530 2_2:-7906572 Msa0235120:three_prime_UTR
AAATATATATTAAGATTTAA+GGG 0.410386 2_2:-7906625 Msa0235120:three_prime_UTR
GGTGTATTTGTGCAGGACTA+TGG 0.415902 2_2:-7907938 Msa0235120:intron
AACAATACCTCAAATACTCT+TGG 0.417652 2_2:-7912275 Msa0235120:CDS
TACCAGGATTACCTGATACT+TGG 0.421208 2_2:-7906724 Msa0235120:CDS
GCAATTTGTTCATAGGAAGT+TGG 0.421455 2_2:-7912386 Msa0235120:CDS
CGTTTAGTGGCATACAATAA+GGG 0.422401 2_2:-7907202 Msa0235120:CDS
CAATTTGTTCATAGGAAGTT+GGG 0.425464 2_2:-7912385 Msa0235120:CDS
TGCAGCCATTGGTGCTTACC+AGG 0.425703 2_2:-7906740 Msa0235120:CDS
ACAGTCTACAGTGACATTCC+AGG 0.428183 2_2:-7911618 Msa0235120:intron
ATTGACCACTTGGGCTAAAT+GGG 0.430670 2_2:-7907179 Msa0235120:CDS
TTGCACCCATTTGCTACTAC+TGG 0.431740 2_2:+7912405 None:intergenic
CAAGAACATGGACCGTTTAG+TGG 0.437683 2_2:-7907215 Msa0235120:CDS
GGATATGTTGACCCTGATAA+TGG 0.441283 2_2:+7906911 None:intergenic
TTAACATTGGAGGATGTAGA+TGG 0.445837 2_2:-7912815 Msa0235120:five_prime_UTR
ATCTACATCCTCCAATGTTA+AGG 0.455082 2_2:+7912817 None:intergenic
GTTCTTTGTATTCATTCCAT+TGG 0.461139 2_2:+7912787 None:intergenic
ACCCCTGTGATGATCCTTTG+TGG 0.461343 2_2:+7907768 None:intergenic
ATTAAATTCAGGATCAATGA+AGG 0.474200 2_2:+7912323 None:intergenic
ACAATAAGGGATTGACCACT+TGG 0.475609 2_2:-7907189 Msa0235120:CDS
CAGGTTTCCAAGAGTATTTG+AGG 0.480299 2_2:+7912268 None:intergenic
GCCTGCATGATCACCACTAT+AGG 0.481631 2_2:+7906769 None:intergenic
GAGCACACTAGTTTCATTCA+AGG 0.483537 2_2:-7912543 Msa0235120:five_prime_UTR
CCCCTGTGATGATCCTTTGT+GGG 0.484273 2_2:+7907769 None:intergenic
TACTAAACAAAATAAGTTCA+GGG 0.485961 2_2:-7906571 Msa0235120:three_prime_UTR
GTCGGTTCTCTTGGTGTGGT+GGG 0.486749 2_2:+7912606 None:intergenic
CCTTATTGTATGCCACTAAA+CGG 0.487673 2_2:+7907203 None:intergenic
ATTCAAGGCAAATCTCAAAT+GGG 0.493177 2_2:-7912528 Msa0235120:exon
TAGTACTTAGTCGGTTCTCT+TGG 0.493289 2_2:+7912597 None:intergenic
ACATGTAGAGTGCAGCATAT+AGG 0.498513 2_2:+7906693 None:intergenic
GGGTAAGAAGATAATGTTTG+TGG 0.503120 2_2:-7911735 Msa0235120:CDS
GGTAAGAAGATAATGTTTGT+GGG 0.504608 2_2:-7911734 Msa0235120:CDS
ATGAAACTAGTGTGCTCTTG+TGG 0.507084 2_2:+7912549 None:intergenic
GCACACCCTTCTTCCTATAG+TGG 0.508415 2_2:-7906782 Msa0235120:CDS
CAGGCAATGATTGCAGCCAT+TGG 0.512288 2_2:-7906751 Msa0235120:CDS
CCCGTGAGCCTTAACATTGG+AGG 0.516984 2_2:-7912825 None:intergenic
TTACACTTCTCTCACAACTA+AGG 0.518338 2_2:-7906811 Msa0235120:CDS
AGTCGGTTCTCTTGGTGTGG+TGG 0.523282 2_2:+7912605 None:intergenic
AGATGGGATTATATAAGAGA+TGG 0.530008 2_2:-7907250 Msa0235120:CDS
TTGTGACTTGAACAGGGGAA+AGG 0.533258 2_2:-7906975 Msa0235120:intron
TGATCACCACTATAGGAAGA+AGG 0.537215 2_2:+7906776 None:intergenic
GTAATCCTGGTAAGCACCAA+TGG 0.537271 2_2:+7906735 None:intergenic
TCCTATAGTGGTGATCATGC+AGG 0.537608 2_2:-7906770 Msa0235120:CDS
ACATTGGACTCTATTGTCGC+TGG 0.539178 2_2:-7907845 Msa0235120:CDS
TGAAACTAGTGTGCTCTTGT+GGG 0.541314 2_2:+7912550 None:intergenic
TTCCAAGTATCAGGTAATCC+TGG 0.542149 2_2:+7906722 None:intergenic
TTCAATATGTTACTTGATGG+AGG 0.553250 2_2:+7906878 None:intergenic
TTAAATTCAGGATCAATGAA+GGG 0.558381 2_2:+7912324 None:intergenic
CTTGATGGAGGTAGACCTGC+TGG 0.559776 2_2:+7906890 None:intergenic
AGGGTATATATACCTTGGTA+AGG 0.564303 2_2:+7912236 None:intergenic
TGGGTCATATATATGTATGA+TGG 0.565789 2_2:+7912569 None:intergenic
AAAAGCCAGTAGTAGCAAAT+GGG 0.567471 2_2:-7912410 Msa0235120:CDS
GATGTAGATGGTTAGACCAA+TGG 0.567920 2_2:-7912803 Msa0235120:five_prime_UTR
GACCCACAAAGGATCATCAC+AGG 0.570940 2_2:-7907771 Msa0235120:CDS
GATGGGATTATATAAGAGAT+GGG 0.572464 2_2:-7907249 Msa0235120:CDS
ATCAACCCATTTAGCCCAAG+TGG 0.578202 2_2:+7907174 None:intergenic
CGTTGGACGAGTGCTTACAT+TGG 0.580963 2_2:-7907861 Msa0235120:CDS
AATCATAGAGAGGATAAGAC+GGG 0.584204 2_2:+7912355 None:intergenic
CTTAGTCGGTTCTCTTGGTG+TGG 0.587703 2_2:+7912602 None:intergenic
GTCTTGTATGATTCATGCGT+CGG 0.589673 2_2:-7911678 Msa0235120:CDS
GTCGCTGGAAATGCATGGAA+AGG 0.589762 2_2:-7907830 Msa0235120:CDS
AGAGTGCAGCATATAGGAGT+TGG 0.590451 2_2:+7906699 None:intergenic
ATGGAAAAGTAGTACTTAGT+CGG 0.593125 2_2:+7912588 None:intergenic
TCAGGGTCAACATATCCAGC+AGG 0.593746 2_2:-7906905 Msa0235120:CDS
GACATAATTCGAGAAAACGT+TGG 0.597443 2_2:-7907878 Msa0235120:CDS
TGGAAATGCATGGAAAGGAA+TGG 0.604996 2_2:-7907825 Msa0235120:CDS
GATCACCACTATAGGAAGAA+GGG 0.614202 2_2:+7906777 None:intergenic
GTAATGTAAGTAGCTTAAGA+GGG 0.614558 2_2:-7912434 Msa0235120:CDS
GAATCATAGAGAGGATAAGA+CGG 0.618192 2_2:+7912354 None:intergenic
ATTCACTGAGTCTGAACATG+TGG 0.618824 2_2:-7911709 Msa0235120:CDS
ATGGAAAGGAATGGACATGC+TGG 0.621693 2_2:-7907816 Msa0235120:CDS
GACAACTTCAACCATTATCA+GGG 0.625022 2_2:-7906922 Msa0235120:CDS
CTGATTCATGTGCCTTACCA+AGG 0.626680 2_2:-7912248 Msa0235120:intron
CTATTGTCGCTGGAAATGCA+TGG 0.626945 2_2:-7907835 Msa0235120:CDS
TAAATTCAGGATCAATGAAG+GGG 0.628632 2_2:+7912325 None:intergenic
TGGCATTGGTGGACCCACAA+AGG 0.630583 2_2:-7907782 Msa0235120:CDS
TAACCCGTGAGCCTTAACAT+TGG 0.631583 2_2:-7912828 None:intergenic
TTTGTTCATAGGAAGTTGGG+TGG 0.640742 2_2:-7912382 Msa0235120:CDS
ACTTGAACAGGGGAAAGGAG+TGG 0.645093 2_2:-7906970 Msa0235120:intron
GGCACTTACTGATAATGAGT+AGG 0.647065 2_2:+7907103 None:intergenic
GTCTAAACTAGTCAAGAACA+TGG 0.648323 2_2:-7907227 Msa0235120:CDS
ACGAAGGAAAATGATCAACA+TGG 0.657716 2_2:+7906656 None:intergenic
TGTCAACCAAATAAGGTGTG+CGG 0.666261 2_2:+7907897 None:intergenic
CAATAAGGGATTGACCACTT+GGG 0.666755 2_2:-7907188 Msa0235120:CDS
ACCCACAAAGGATCATCACA+GGG 0.673284 2_2:-7907770 Msa0235120:CDS
GGGCAGCTTGAATCATAGAG+AGG 0.678061 2_2:+7912345 None:intergenic
TTCACTGAGTCTGAACATGT+GGG 0.711654 2_2:-7911708 Msa0235120:CDS
CCCACAAAGGATCATCACAG+GGG 0.803852 2_2:-7907769 Msa0235120:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTAATTTTTTTA+TGG - chr2_2:7910305-7910324 Msa0235120:intron 0.0%
!!! TATAATTAAAATTTTATTAA+TGG + chr2_2:7911868-7911887 None:intergenic 0.0%
!! ATCAAATAAATAAATTTAAC+TGG + chr2_2:7907092-7907111 None:intergenic 10.0%
!! TAAGAGAAAATTATTAATAA+CGG + chr2_2:7907343-7907362 None:intergenic 10.0%
!!! GTATAGTTTTTAAAAAATTA+CGG - chr2_2:7907911-7907930 Msa0235120:CDS 10.0%
!!! TCAATTTTTATTTTTATTGT+AGG + chr2_2:7908015-7908034 None:intergenic 10.0%
!!! TAAATTTGTAAATTTGATTT+TGG - chr2_2:7908073-7908092 Msa0235120:intron 10.0%
!!! ACACTGATTTTTTTATTTTT+GGG + chr2_2:7906552-7906571 None:intergenic 15.0%
!!! TATTTTTGACAATTAAATTC+AGG + chr2_2:7906878-7906897 None:intergenic 15.0%
!! GAATTTAATTGTCAAAAATA+TGG - chr2_2:7906878-7906897 Msa0235120:CDS 15.0%
!! AAGAAATTGTATAATTGTAT+TGG + chr2_2:7906989-7907008 None:intergenic 15.0%
!! TGTTTGATAGATATAAATAA+AGG + chr2_2:7907171-7907190 None:intergenic 15.0%
!! AAAATAAAATAAAGTAAACC+TGG + chr2_2:7907590-7907609 None:intergenic 15.0%
!!! AATTTGATTTTGGTTAAAAA+CGG - chr2_2:7908083-7908102 Msa0235120:intron 15.0%
!! TATTTAGTGTTATATTGTAT+TGG + chr2_2:7908420-7908439 None:intergenic 15.0%
!!! AAGAAAAGTGTATAAATAAA+GGG + chr2_2:7908484-7908503 None:intergenic 15.0%
!!! TAAGAAAAGTGTATAAATAA+AGG + chr2_2:7908485-7908504 None:intergenic 15.0%
!!! TATTTTTTTTTATAAAGGGA+TGG - chr2_2:7909350-7909369 Msa0235120:intron 15.0%
!!! TCATTACTCATTTTAATTTT+GGG + chr2_2:7909739-7909758 None:intergenic 15.0%
!!! TAAGTTGAAATTAATATTGA+TGG - chr2_2:7910025-7910044 Msa0235120:intron 15.0%
!! TGAATAATTCTTTGATTAAA+AGG + chr2_2:7910059-7910078 None:intergenic 15.0%
!! AATAAAATAGCAATAAACAT+TGG + chr2_2:7910116-7910135 None:intergenic 15.0%
!! TGAAGATTAATATAATGAAA+TGG - chr2_2:7910493-7910512 Msa0235120:intron 15.0%
!! GAAGATTAATATAATGAAAT+GGG - chr2_2:7910494-7910513 Msa0235120:intron 15.0%
!!! AAAAAATTAAGCATTGAAAA+TGG + chr2_2:7910543-7910562 None:intergenic 15.0%
!!! TTCAATGCTTAATTTTTTAT+CGG - chr2_2:7910545-7910564 Msa0235120:intron 15.0%
!!! CATCTAAAATTTAAGATATT+AGG + chr2_2:7910687-7910706 None:intergenic 15.0%
!!! CTAATATCTTAAATTTTAGA+TGG - chr2_2:7910685-7910704 Msa0235120:intron 15.0%
!!! GTAATTTATATAGTTCTTTT+GGG + chr2_2:7911552-7911571 None:intergenic 15.0%
!!! AGTAATTTATATAGTTCTTT+TGG + chr2_2:7911553-7911572 None:intergenic 15.0%
!! CTATATAAATTACTTTCTAA+CGG - chr2_2:7911559-7911578 Msa0235120:intron 15.0%
!!! AATTTTATTAATGGAAGTAT+CGG + chr2_2:7911859-7911878 None:intergenic 15.0%
!! AAGAAAAAAAAAACATTACT+TGG - chr2_2:7911890-7911909 Msa0235120:intron 15.0%
!!! TTAATTTATTTTCAGCATTA+TGG + chr2_2:7912174-7912193 None:intergenic 15.0%
!! AAAATCAAGTGTAAAATTAT+AGG - chr2_2:7912588-7912607 Msa0235120:five_prime_UTR 15.0%
!! TATTAAAAAATTACTTTACG+AGG - chr2_2:7912654-7912673 Msa0235120:five_prime_UTR 15.0%
!! ATTAAAAAATTACTTTACGA+GGG - chr2_2:7912655-7912674 Msa0235120:five_prime_UTR 15.0%
!! TTTGAATAAATGTTAGTTAT+TGG - chr2_2:7912810-7912829 Msa0235120:five_prime_UTR 15.0%
!!! ATTGAAGAGATTGTTTTTAT+GGG + chr2_2:7906468-7906487 None:intergenic 20.0%
!!! AATTGAAGAGATTGTTTTTA+TGG + chr2_2:7906469-7906488 None:intergenic 20.0%
!!! GACACTGATTTTTTTATTTT+TGG + chr2_2:7906553-7906572 None:intergenic 20.0%
!! TAATCTAAGAAACATGATAT+TGG + chr2_2:7907017-7907036 None:intergenic 20.0%
!! AAAAACATACACATGATATT+TGG + chr2_2:7907795-7907814 None:intergenic 20.0%
!! AAAAATATCATGTGTATGTT+TGG - chr2_2:7907828-7907847 Msa0235120:CDS 20.0%
!! TGTTTGAATACATTTAATCA+AGG - chr2_2:7908130-7908149 Msa0235120:intron 20.0%
!! TATTTGAATACATTTAATCC+AGG - chr2_2:7908229-7908248 Msa0235120:intron 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG + chr2_2:7908350-7908369 None:intergenic 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG + chr2_2:7908386-7908405 None:intergenic 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG + chr2_2:7908387-7908406 None:intergenic 20.0%
!!! AGAAAAGTGTATAAATAAAG+GGG + chr2_2:7908483-7908502 None:intergenic 20.0%
!!! TAAAAGTTTGTGTTACTTAT+AGG + chr2_2:7908699-7908718 None:intergenic 20.0%
!! CAAGAAATATATAAATCGAA+AGG - chr2_2:7908755-7908774 Msa0235120:intron 20.0%
!!! TTTGATTAGTTGAGATATAA+GGG + chr2_2:7909253-7909272 None:intergenic 20.0%
!!! TTTTGATTAGTTGAGATATA+AGG + chr2_2:7909254-7909273 None:intergenic 20.0%
!!! TTGATTTTTGAATTGTTGAT+TGG + chr2_2:7909463-7909482 None:intergenic 20.0%
!!! TTTCTCAACTTTATTTTTTG+TGG + chr2_2:7909510-7909529 None:intergenic 20.0%
!! TGAATTAAATCATATGTGAT+CGG + chr2_2:7909584-7909603 None:intergenic 20.0%
!!! CATTACTCATTTTAATTTTG+GGG + chr2_2:7909738-7909757 None:intergenic 20.0%
!!! GTCATTACTCATTTTAATTT+TGG + chr2_2:7909740-7909759 None:intergenic 20.0%
!! TGTTTCATAATTTCATACTA+CGG + chr2_2:7909970-7909989 None:intergenic 20.0%
!! TAATTCTTTGATTAAAAGGT+AGG + chr2_2:7910055-7910074 None:intergenic 20.0%
!!! ATAAAAACAGCATTTTCAAA+AGG + chr2_2:7910347-7910366 None:intergenic 20.0%
!!! TCAATGCTTAATTTTTTATC+GGG - chr2_2:7910546-7910565 Msa0235120:intron 20.0%
!! TTATCGGGTAAAATTTATAT+AGG - chr2_2:7910561-7910580 Msa0235120:intron 20.0%
!!! TTTTGGGTAAAATATACTAT+AGG + chr2_2:7910796-7910815 None:intergenic 20.0%
!!! ACAATACACATTTTAAGATT+AGG + chr2_2:7910951-7910970 None:intergenic 20.0%
!! TATTCATTCGTTATATGTAA+AGG + chr2_2:7911023-7911042 None:intergenic 20.0%
!! TATTAAAGAGTGATAACATT+TGG - chr2_2:7911222-7911241 Msa0235120:intron 20.0%
!!! TTTGTTTTTTGGTGAATAAA+TGG + chr2_2:7911604-7911623 None:intergenic 20.0%
!!! TCGTGATTTTGTAAATATTA+CGG - chr2_2:7911734-7911753 Msa0235120:CDS 20.0%
!! CATTATGGAATATACAAAAA+TGG + chr2_2:7912159-7912178 None:intergenic 20.0%
!! TTACTAAACAAAATAAGTTC+AGG - chr2_2:7912615-7912634 Msa0235120:five_prime_UTR 20.0%
!! TACTAAACAAAATAAGTTCA+GGG - chr2_2:7912616-7912635 Msa0235120:five_prime_UTR 20.0%
!! TTAAAAAATTACTTTACGAG+GGG - chr2_2:7912656-7912675 Msa0235120:five_prime_UTR 20.0%
!!! TTGAAGAGATTGTTTTTATG+GGG + chr2_2:7906467-7906486 None:intergenic 25.0%
! TTAAATTCAGGATCAATGAA+GGG + chr2_2:7906866-7906885 None:intergenic 25.0%
! ATTAAATTCAGGATCAATGA+AGG + chr2_2:7906867-7906886 None:intergenic 25.0%
! TAAGAAACATGATATTGGTA+TGG + chr2_2:7907012-7907031 None:intergenic 25.0%
! TAAATTTAACTGGCTGATAT+TGG + chr2_2:7907082-7907101 None:intergenic 25.0%
! TCAAATCTTATATGAGAAAG+TGG - chr2_2:7907133-7907152 Msa0235120:CDS 25.0%
! TGATAGATATAAATAAAGGC+TGG + chr2_2:7907167-7907186 None:intergenic 25.0%
! TATCAAACACAAATACTACT+TGG - chr2_2:7907182-7907201 Msa0235120:CDS 25.0%
!! TTTTGTATTAGTGTTGTGTT+TGG - chr2_2:7907283-7907302 Msa0235120:intron 25.0%
! TCTTTGTCTTCTTTCTAATT+TGG - chr2_2:7907617-7907636 Msa0235120:intron 25.0%
! TAAAGAAACAAACAAGGAAA+TGG + chr2_2:7907702-7907721 None:intergenic 25.0%
!!! AGAATTTTGAAGAGTATGTT+TGG + chr2_2:7907969-7907988 None:intergenic 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG + chr2_2:7908351-7908370 None:intergenic 25.0%
! TATTGAAAATTGAAATGGGT+CGG + chr2_2:7908382-7908401 None:intergenic 25.0%
! TGTTTGAATACATTTAATCC+AGG - chr2_2:7908567-7908586 Msa0235120:intron 25.0%
! TTGACATAAACTAACTTTAG+TGG + chr2_2:7908594-7908613 None:intergenic 25.0%
! TTAGTTTATGTCAAAACTGT+TGG - chr2_2:7908600-7908619 Msa0235120:intron 25.0%
!!! TTAGTGTGTGTTTAGTTTTA+AGG + chr2_2:7908643-7908662 None:intergenic 25.0%
!!! ATTTATACACTAGTCACTTT+TGG - chr2_2:7908731-7908750 Msa0235120:intron 25.0%
!!! TTTATACACTAGTCACTTTT+GGG - chr2_2:7908732-7908751 Msa0235120:intron 25.0%
! ATTGAAGAGTAAAACTTGTA+TGG + chr2_2:7908993-7909012 None:intergenic 25.0%
! AATGTATAAAAGCAAGAGTT+AGG - chr2_2:7909018-7909037 Msa0235120:intron 25.0%
!! TTGATTAGTTGAGATATAAG+GGG + chr2_2:7909252-7909271 None:intergenic 25.0%
! CATTCGATCAGATATTATAT+CGG + chr2_2:7909549-7909568 None:intergenic 25.0%
! CCTTATCTTATCAAAATCTT+TGG + chr2_2:7909682-7909701 None:intergenic 25.0%
!!! CCAAAGATTTTGATAAGATA+AGG - chr2_2:7909679-7909698 Msa0235120:intron 25.0%
! TGAACACCTAATAATAAAGA+GGG + chr2_2:7909833-7909852 None:intergenic 25.0%
! ATGAACACCTAATAATAAAG+AGG + chr2_2:7909834-7909853 None:intergenic 25.0%
! TTATTAGGTGTTCATTATGT+TGG - chr2_2:7909839-7909858 Msa0235120:intron 25.0%
! TAATGTTGACAAGTCATAAA+TGG + chr2_2:7909935-7909954 None:intergenic 25.0%
! GTTGTAATTGCATACAAATT+TGG - chr2_2:7909997-7910016 Msa0235120:intron 25.0%
!!! CTATGATTTGTCATTTTCTT+AGG + chr2_2:7910089-7910108 None:intergenic 25.0%
! AGATGTTCCAAAATATTTCA+TGG - chr2_2:7910181-7910200 Msa0235120:intron 25.0%
!! ATCTAAGCCATGAAATATTT+TGG + chr2_2:7910191-7910210 None:intergenic 25.0%
!! AATATACTATAGGTCCTTTT+GGG + chr2_2:7910786-7910805 None:intergenic 25.0%
!! AAATATACTATAGGTCCTTT+TGG + chr2_2:7910787-7910806 None:intergenic 25.0%
!!! CACATTTTAAGATTAGGTAA+GGG + chr2_2:7910945-7910964 None:intergenic 25.0%
!!! ACACATTTTAAGATTAGGTA+AGG + chr2_2:7910946-7910965 None:intergenic 25.0%
!!! AGTGTACATACTTTGTTTTT+TGG + chr2_2:7911615-7911634 None:intergenic 25.0%
!!! ACTATGTTTACAGTTTTGAT+TGG - chr2_2:7911632-7911651 Msa0235120:CDS 25.0%
!!! CTATGTTTACAGTTTTGATT+GGG - chr2_2:7911633-7911652 Msa0235120:CDS 25.0%
!! TACTTTTATCATGTTCAGAT+GGG - chr2_2:7911921-7911940 Msa0235120:intron 25.0%
!!! TTGAAAGAAGACTTTAGTTT+TGG + chr2_2:7912055-7912074 None:intergenic 25.0%
! AAAACTAAAGTCTTCTTTCA+AGG - chr2_2:7912054-7912073 Msa0235120:intron 25.0%
! ACACAAAACTATTGAATAGA+AGG + chr2_2:7912108-7912127 None:intergenic 25.0%
!! TAATATTTTGTGACTTGAAC+AGG - chr2_2:7912205-7912224 Msa0235120:intron 25.0%
!! AATATTTTGTGACTTGAACA+GGG - chr2_2:7912206-7912225 Msa0235120:intron 25.0%
!! TTGTTCAATATGTTACTTGA+TGG + chr2_2:7912315-7912334 None:intergenic 25.0%
! GTAATATCAAGTAGATAAAC+TGG + chr2_2:7912360-7912379 None:intergenic 25.0%
!! ATATATTTTCCAAGTAACGA+AGG + chr2_2:7912550-7912569 None:intergenic 25.0%
GTTCTTTGTATTCATTCCAT+TGG + chr2_2:7906403-7906422 None:intergenic 30.0%
!!! ATTTTTGGGATTGTGACAAA+GGG + chr2_2:7906538-7906557 None:intergenic 30.0%
!!! TATTTTTGGGATTGTGACAA+AGG + chr2_2:7906539-7906558 None:intergenic 30.0%
ATGGAAAAGTAGTACTTAGT+CGG + chr2_2:7906602-7906621 None:intergenic 30.0%
TGGGTCATATATATGTATGA+TGG + chr2_2:7906621-7906640 None:intergenic 30.0%
ATTCAAGGCAAATCTCAAAT+GGG - chr2_2:7906659-7906678 Msa0235120:three_prime_UTR 30.0%
!! CTTTTTCATCAACTTCTACT+TGG - chr2_2:7906716-7906735 Msa0235120:CDS 30.0%
AGTAATGTAAGTAGCTTAAG+AGG - chr2_2:7906752-7906771 Msa0235120:CDS 30.0%
GTAATGTAAGTAGCTTAAGA+GGG - chr2_2:7906753-7906772 Msa0235120:CDS 30.0%
! CAATTTGTTCATAGGAAGTT+GGG - chr2_2:7906802-7906821 Msa0235120:CDS 30.0%
TAAATTCAGGATCAATGAAG+GGG + chr2_2:7906865-7906884 None:intergenic 30.0%
!! TATTTGAGGTATTGTTTGTC+AGG + chr2_2:7906908-7906927 None:intergenic 30.0%
AACAATACCTCAAATACTCT+TGG - chr2_2:7906912-7906931 Msa0235120:CDS 30.0%
! GTATTGGTACATAAATGTGA+GGG + chr2_2:7906973-7906992 None:intergenic 30.0%
! TGTATTGGTACATAAATGTG+AGG + chr2_2:7906974-7906993 None:intergenic 30.0%
AGATTTGAACTAAGACACTA+AGG + chr2_2:7907121-7907140 None:intergenic 30.0%
ACACAAATACTACTTGGATT+AGG - chr2_2:7907188-7907207 Msa0235120:CDS 30.0%
GTAATCATATATGTTAGTGC+CGG + chr2_2:7907243-7907262 None:intergenic 30.0%
! GGAAAGATTTTCTGAACAAA+TGG - chr2_2:7907427-7907446 Msa0235120:intron 30.0%
! AAGATTTTCTGAACAAATGG+AGG - chr2_2:7907430-7907449 Msa0235120:intron 30.0%
! AGATTTTCTGAACAAATGGA+GGG - chr2_2:7907431-7907450 Msa0235120:intron 30.0%
GGTAAGAAGATAATGTTTGT+GGG - chr2_2:7907453-7907472 Msa0235120:intron 30.0%
GCAACATAAAGAAACAAACA+AGG + chr2_2:7907708-7907727 None:intergenic 30.0%
!! ATACACATGATATTTGGTGT+TGG + chr2_2:7907789-7907808 None:intergenic 30.0%
CATGTGTATGTTTGGTATTA+CGG - chr2_2:7907836-7907855 Msa0235120:CDS 30.0%
! TTTGAAGAGTATGTTTGGTA+TGG + chr2_2:7907964-7907983 None:intergenic 30.0%
!! GATTCACTTTTGGTTAAAAG+CGG - chr2_2:7908181-7908200 Msa0235120:intron 30.0%
! GAAGTTTATGTCAAAAGTGT+TGG - chr2_2:7908258-7908277 Msa0235120:intron 30.0%
!!! AAAAGTGTTGGATTCACTTT+TGG - chr2_2:7908270-7908289 Msa0235120:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG + chr2_2:7908476-7908495 None:intergenic 30.0%
TTTGTGTGAAAAACCAAAGT+AGG - chr2_2:7908506-7908525 Msa0235120:intron 30.0%
! AAAACTGTTGGATTCACTTT+TGG - chr2_2:7908612-7908631 Msa0235120:intron 30.0%
TAGTGTGAGCAAAACTTATA+TGG - chr2_2:7908895-7908914 Msa0235120:intron 30.0%
GGTCACATGCATAAATAATT+TGG + chr2_2:7908972-7908991 None:intergenic 30.0%
TACATGTCCACTATATTCTT+GGG + chr2_2:7909089-7909108 None:intergenic 30.0%
! AAAGTGAAGATTCTTTTGCT+TGG - chr2_2:7909430-7909449 Msa0235120:intron 30.0%
TAAAGTTGAGAAAACATCTC+AGG - chr2_2:7909517-7909536 Msa0235120:intron 30.0%
GAACACCTAATAATAAAGAG+GGG + chr2_2:7909832-7909851 None:intergenic 30.0%
GTAATTGCATACAAATTTGG+CGG - chr2_2:7910000-7910019 Msa0235120:intron 30.0%
! TCTAAAATCCTAATTATGGC+GGG + chr2_2:7910153-7910172 None:intergenic 30.0%
! GTCTAAAATCCTAATTATGG+CGG + chr2_2:7910154-7910173 None:intergenic 30.0%
! GGAGTCTAAAATCCTAATTA+TGG + chr2_2:7910157-7910176 None:intergenic 30.0%
! TAATTAGGATTTTAGACTCC+TGG - chr2_2:7910157-7910176 Msa0235120:intron 30.0%
!!! AATATTTTGGAACATCTACC+AGG + chr2_2:7910178-7910197 None:intergenic 30.0%
TATGAGATTAATCTTCGAGT+TGG - chr2_2:7910223-7910242 Msa0235120:intron 30.0%
AAAGTGAAAAAGAGATTCCA+TGG - chr2_2:7910409-7910428 Msa0235120:intron 30.0%
AAGTGAAAAAGAGATTCCAT+GGG - chr2_2:7910410-7910429 Msa0235120:intron 30.0%
TCTGTCAATACAGTAAGATA+AGG - chr2_2:7910459-7910478 Msa0235120:intron 30.0%
! TATAGGTGTAATTTTCGAAG+TGG - chr2_2:7910578-7910597 Msa0235120:intron 30.0%
GTGAGATATGTTTGTTTAAG+TGG - chr2_2:7910600-7910619 Msa0235120:intron 30.0%
!!! CGCTTTCAACACTTTTTTTT+GGG + chr2_2:7910812-7910831 None:intergenic 30.0%
!!! ACGCTTTCAACACTTTTTTT+TGG + chr2_2:7910813-7910832 None:intergenic 30.0%
AAAAACACGGTTAAACAACT+AGG + chr2_2:7911062-7911081 None:intergenic 30.0%
ATTTCAGACTTCATCGAATA+GGG + chr2_2:7911087-7911106 None:intergenic 30.0%
! AGTCAAATATCACGTTTTGA+CGG - chr2_2:7911128-7911147 Msa0235120:intron 30.0%
! TGCATTATGTTGTTTGTTAG+TGG - chr2_2:7911160-7911179 Msa0235120:intron 30.0%
TGTTATCACTCTTTAATAGC+TGG + chr2_2:7911220-7911239 None:intergenic 30.0%
CGAATTATGTCAACCAAATA+AGG + chr2_2:7911300-7911319 None:intergenic 30.0%
CAAACATACTGTTACTAGTT+AGG + chr2_2:7911515-7911534 None:intergenic 30.0%
CTAACTAGTAACAGTATGTT+TGG - chr2_2:7911513-7911532 Msa0235120:intron 30.0%
! AAGCATACACGTAAAGTATT+AGG + chr2_2:7911677-7911696 None:intergenic 30.0%
TAATACTTTACGTGTATGCT+TGG - chr2_2:7911676-7911695 Msa0235120:CDS 30.0%
!! CTACTTTTATCATGTTCAGA+TGG - chr2_2:7911920-7911939 Msa0235120:intron 30.0%
AGATGGGATTATATAAGAGA+TGG - chr2_2:7911937-7911956 Msa0235120:intron 30.0%
GATGGGATTATATAAGAGAT+GGG - chr2_2:7911938-7911957 Msa0235120:intron 30.0%
!!! AAGAAGACTTTAGTTTTGGT+AGG + chr2_2:7912051-7912070 None:intergenic 30.0%
! ATATTTTGTGACTTGAACAG+GGG - chr2_2:7912207-7912226 Msa0235120:intron 30.0%
CAACCAAAAAATAGTTGTAG+TGG - chr2_2:7912243-7912262 Msa0235120:intron 30.0%
!!! TGTCCACTACAACTATTTTT+TGG + chr2_2:7912249-7912268 None:intergenic 30.0%
! TTCAATATGTTACTTGATGG+AGG + chr2_2:7912312-7912331 None:intergenic 30.0%
ATCTACATCCTCCAATGTTA+AGG + chr2_2:7906373-7906392 None:intergenic 35.0%
TTAACATTGGAGGATGTAGA+TGG - chr2_2:7906372-7906391 Msa0235120:three_prime_UTR 35.0%
CATTCAAGGCAAATCTCAAA+TGG - chr2_2:7906658-7906677 Msa0235120:three_prime_UTR 35.0%
AAAAAGCCAGTAGTAGCAAA+TGG - chr2_2:7906776-7906795 Msa0235120:CDS 35.0%
AAAAGCCAGTAGTAGCAAAT+GGG - chr2_2:7906777-7906796 Msa0235120:CDS 35.0%
! AATGGGTGCAATTTGTTCAT+AGG - chr2_2:7906794-7906813 Msa0235120:CDS 35.0%
! GCAATTTGTTCATAGGAAGT+TGG - chr2_2:7906801-7906820 Msa0235120:CDS 35.0%
AATCATAGAGAGGATAAGAC+GGG + chr2_2:7906835-7906854 None:intergenic 35.0%
GAATCATAGAGAGGATAAGA+CGG + chr2_2:7906836-7906855 None:intergenic 35.0%
AGGGTATATATACCTTGGTA+AGG + chr2_2:7906954-7906973 None:intergenic 35.0%
! ATGTGAGGGTATATATACCT+TGG + chr2_2:7906959-7906978 None:intergenic 35.0%
ATTAGGCGTGCTATAATGTT+GGG - chr2_2:7907205-7907224 Msa0235120:CDS 35.0%
TGTTGGGTACATATTGTTTC+CGG - chr2_2:7907221-7907240 Msa0235120:CDS 35.0%
AATGAACACAAACTCAGACA+CGG + chr2_2:7907312-7907331 None:intergenic 35.0%
!!! TTGTGTGTGTGTAGTTTTGA+CGG - chr2_2:7907405-7907424 Msa0235120:intron 35.0%
! GATTTTCTGAACAAATGGAG+GGG - chr2_2:7907432-7907451 Msa0235120:intron 35.0%
GGGTAAGAAGATAATGTTTG+TGG - chr2_2:7907452-7907471 Msa0235120:intron 35.0%
!! AAAAAGCTGGTCTTTGCATT+GGG + chr2_2:7907537-7907556 None:intergenic 35.0%
!! TAAAAAGCTGGTCTTTGCAT+TGG + chr2_2:7907538-7907557 None:intergenic 35.0%
! ATGCAAAGACCAGCTTTTTA+AGG - chr2_2:7907538-7907557 Msa0235120:intron 35.0%
TGGTGCATGATTCATTTCAT+TGG - chr2_2:7907637-7907656 Msa0235120:intron 35.0%
CGGTAGTTATGTCTGAATTA+CGG - chr2_2:7907856-7907875 Msa0235120:CDS 35.0%
! AAACGTGTTGGATTCACTTT+TGG - chr2_2:7908171-7908190 Msa0235120:intron 35.0%
!!! TTGGATTCACTTTTGGCTTT+TGG - chr2_2:7908277-7908296 Msa0235120:intron 35.0%
AGAAAATGGGTCAGTTATTC+CGG + chr2_2:7908337-7908356 None:intergenic 35.0%
!! TGAAATGGGTCGGTTATTTT+GGG + chr2_2:7908372-7908391 None:intergenic 35.0%
! TTGAAATGGGTCGGTTATTT+TGG + chr2_2:7908373-7908392 None:intergenic 35.0%
CCAAAGTAGGTCAATTATAC+CGG - chr2_2:7908519-7908538 Msa0235120:intron 35.0%
CAAAGTAGGTCAATTATACC+GGG - chr2_2:7908520-7908539 Msa0235120:intron 35.0%
! TAAACTAACTTTAGTGGACC+TGG + chr2_2:7908588-7908607 None:intergenic 35.0%
GTACATGTCCACTATATTCT+TGG + chr2_2:7909090-7909109 None:intergenic 35.0%
GTGCATCAATTTGAAAATGG+AGG + chr2_2:7909112-7909131 None:intergenic 35.0%
ACGGTGCATCAATTTGAAAA+TGG + chr2_2:7909115-7909134 None:intergenic 35.0%
!!! GCTACTTTTGAAGAGTTTCA+TGG - chr2_2:7909406-7909425 Msa0235120:intron 35.0%
AATGAGTAATGACTTATCCC+TGG - chr2_2:7909747-7909766 Msa0235120:intron 35.0%
AGGATCCCCTCTTTATTATT+AGG - chr2_2:7909824-7909843 Msa0235120:intron 35.0%
TCGAAGATTAATCTCATAGC+GGG + chr2_2:7910221-7910240 None:intergenic 35.0%
CTCGAAGATTAATCTCATAG+CGG + chr2_2:7910222-7910241 None:intergenic 35.0%
! ACTATGAGTGGATTCATTGT+TGG - chr2_2:7910636-7910655 Msa0235120:intron 35.0%
!!! GTAGTGTTCCACTTTTTTGA+TGG - chr2_2:7910712-7910731 Msa0235120:intron 35.0%
!!! TTCCACTTTTTTGATGGTCT+TGG - chr2_2:7910718-7910737 Msa0235120:intron 35.0%
ATCCAAGACCATCAAAAAAG+TGG + chr2_2:7910723-7910742 None:intergenic 35.0%
! GGTCTTGGATCATTAGTTTA+CGG - chr2_2:7910733-7910752 Msa0235120:intron 35.0%
! ATCATTAGTTTACGGCTCTA+AGG - chr2_2:7910741-7910760 Msa0235120:intron 35.0%
! TCATTAGTTTACGGCTCTAA+GGG - chr2_2:7910742-7910761 Msa0235120:intron 35.0%
!! GAAAGCGTTAGAGTGAATAT+CGG - chr2_2:7910825-7910844 Msa0235120:intron 35.0%
TAAGATTAGGTAAGGGATCA+TGG + chr2_2:7910938-7910957 None:intergenic 35.0%
ATCGAATAGGGTCAAAAACA+CGG + chr2_2:7911075-7911094 None:intergenic 35.0%
GATTTCAGACTTCATCGAAT+AGG + chr2_2:7911088-7911107 None:intergenic 35.0%
! ATGAAGTCTGAAATCCGTTA+GGG - chr2_2:7911093-7911112 Msa0235120:intron 35.0%
ACGTGATATTTGACTGACAA+GGG + chr2_2:7911123-7911142 None:intergenic 35.0%
AACGTGATATTTGACTGACA+AGG + chr2_2:7911124-7911143 None:intergenic 35.0%
TGGTATTAAATTGCATCGCA+TGG + chr2_2:7911200-7911219 None:intergenic 35.0%
!! AGAGTGATAACATTTGGTGT+TGG - chr2_2:7911228-7911247 Msa0235120:intron 35.0%
GACATAATTCGAGAAAACGT+TGG - chr2_2:7911309-7911328 Msa0235120:intron 35.0%
TACATATGTGGTAGCAATTG+CGG - chr2_2:7911804-7911823 Msa0235120:intron 35.0%
GTCTAAACTAGTCAAGAACA+TGG - chr2_2:7911960-7911979 Msa0235120:intron 35.0%
CCTTATTGTATGCCACTAAA+CGG + chr2_2:7911987-7912006 None:intergenic 35.0%
CGTTTAGTGGCATACAATAA+GGG - chr2_2:7911985-7912004 Msa0235120:intron 35.0%
GACAACTTCAACCATTATCA+GGG - chr2_2:7912265-7912284 Msa0235120:CDS 35.0%
TTACACTTCTCTCACAACTA+AGG - chr2_2:7912376-7912395 Msa0235120:CDS 35.0%
ACGAAGGAAAATGATCAACA+TGG + chr2_2:7912534-7912553 None:intergenic 35.0%
! GATCATTTTCCTTCGTTACT+TGG - chr2_2:7912538-7912557 Msa0235120:five_prime_UTR 35.0%
GATGTAGATGGTTAGACCAA+TGG - chr2_2:7906384-7906403 Msa0235120:three_prime_UTR 40.0%
!!! TTGTGACAAAGGGTTTTGGA+TGG + chr2_2:7906528-7906547 None:intergenic 40.0%
! TAGTACTTAGTCGGTTCTCT+TGG + chr2_2:7906593-7906612 None:intergenic 40.0%
TGAAACTAGTGTGCTCTTGT+GGG + chr2_2:7906640-7906659 None:intergenic 40.0%
ATGAAACTAGTGTGCTCTTG+TGG + chr2_2:7906641-7906660 None:intergenic 40.0%
! GAGCACACTAGTTTCATTCA+AGG - chr2_2:7906644-7906663 Msa0235120:three_prime_UTR 40.0%
TTTGTTCATAGGAAGTTGGG+TGG - chr2_2:7906805-7906824 Msa0235120:CDS 40.0%
!! CAGGTTTCCAAGAGTATTTG+AGG + chr2_2:7906922-7906941 None:intergenic 40.0%
GATTAGGCGTGCTATAATGT+TGG - chr2_2:7907204-7907223 Msa0235120:CDS 40.0%
!!! TGTGTGTGTGTAGTTTTGAC+GGG - chr2_2:7907406-7907425 Msa0235120:intron 40.0%
ATTCACTGAGTCTGAACATG+TGG - chr2_2:7907478-7907497 Msa0235120:intron 40.0%
TTCACTGAGTCTGAACATGT+GGG - chr2_2:7907479-7907498 Msa0235120:intron 40.0%
GTCTTGTATGATTCATGCGT+CGG - chr2_2:7907509-7907528 Msa0235120:intron 40.0%
TGCTTCTCTCCTTAAAAAGC+TGG + chr2_2:7907550-7907569 None:intergenic 40.0%
AACGCATGGCGTAAATGAAA+AGG + chr2_2:7907730-7907749 None:intergenic 40.0%
! TTTTCATTTACGCCATGCGT+TGG - chr2_2:7907729-7907748 Msa0235120:intron 40.0%
ATACTTGAAGAACCAACGCA+TGG + chr2_2:7907744-7907763 None:intergenic 40.0%
! AGTGTTTCTGCAAATCATGG+TGG + chr2_2:7907886-7907905 None:intergenic 40.0%
! CGTAGTGTTTCTGCAAATCA+TGG + chr2_2:7907889-7907908 None:intergenic 40.0%
! TGGTGGATATGCTAGAATCA+TGG + chr2_2:7907944-7907963 None:intergenic 40.0%
! GAAGAGTATGTTTGGTATGG+TGG + chr2_2:7907961-7907980 None:intergenic 40.0%
CAAGTCTATGTCAAACGTGT+TGG - chr2_2:7908159-7908178 Msa0235120:intron 40.0%
GACATAAACTTCAGTAGACC+TGG + chr2_2:7908250-7908269 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG + chr2_2:7908336-7908355 None:intergenic 40.0%
CCGGTATAATTGACCTACTT+TGG + chr2_2:7908522-7908541 None:intergenic 40.0%
TCAATGGCCCAAGAATATAG+TGG - chr2_2:7909079-7909098 Msa0235120:intron 40.0%
!! GCATTAGCACTTAGCTTTGT+GGG + chr2_2:7909197-7909216 None:intergenic 40.0%
!! AGCATTAGCACTTAGCTTTG+TGG + chr2_2:7909198-7909217 None:intergenic 40.0%
TCCAACTTGTAATCACAGGT+TGG + chr2_2:7909801-7909820 None:intergenic 40.0%
! AACCTGTGATTACAAGTTGG+AGG - chr2_2:7909800-7909819 Msa0235120:intron 40.0%
! ACCTGTGATTACAAGTTGGA+GGG - chr2_2:7909801-7909820 Msa0235120:intron 40.0%
GACTTGTCAACATTATTCCG+TGG - chr2_2:7909940-7909959 Msa0235120:intron 40.0%
TGTCAACATTATTCCGTGGA+TGG - chr2_2:7909944-7909963 Msa0235120:intron 40.0%
CTTTCTAACCCGCCATAATT+AGG - chr2_2:7910142-7910161 Msa0235120:intron 40.0%
!! TTAATCTTCGAGTTGGCAGT+AGG - chr2_2:7910230-7910249 Msa0235120:intron 40.0%
AAAAAGAGATTCCATGGGAC+AGG - chr2_2:7910415-7910434 Msa0235120:intron 40.0%
AAAGATTCAAACCTGTCCCA+TGG + chr2_2:7910429-7910448 None:intergenic 40.0%
AATCCACTCATAGTCGATGT+TGG + chr2_2:7910630-7910649 None:intergenic 40.0%
!! CATTAGTTTACGGCTCTAAG+GGG - chr2_2:7910743-7910762 Msa0235120:intron 40.0%
! ATACTATAGGTCCTTTTGGG+AGG + chr2_2:7910783-7910802 None:intergenic 40.0%
ATTAGGTAAGGGATCATGGT+AGG + chr2_2:7910934-7910953 None:intergenic 40.0%
! GATGAAGTCTGAAATCCGTT+AGG - chr2_2:7911092-7911111 Msa0235120:intron 40.0%
ACTATACCGCACACCTTATT+TGG - chr2_2:7911284-7911303 Msa0235120:intron 40.0%
TGTCAACCAAATAAGGTGTG+CGG + chr2_2:7911293-7911312 None:intergenic 40.0%
TGGAAATGCATGGAAAGGAA+TGG - chr2_2:7911362-7911381 Msa0235120:intron 40.0%
!!! ACATGCTGGTTTTCAACTCA+TGG - chr2_2:7911385-7911404 Msa0235120:intron 40.0%
! TGGTTTTCAACTCATGGCAT+TGG - chr2_2:7911391-7911410 Msa0235120:intron 40.0%
!! TTTTCAACTCATGGCATTGG+TGG - chr2_2:7911394-7911413 Msa0235120:intron 40.0%
TACGTGTATGCTTGGTATCA+CGG - chr2_2:7911684-7911703 Msa0235120:CDS 40.0%
CGGTGGATATGTTAAAAGCA+CGG + chr2_2:7911767-7911786 None:intergenic 40.0%
GTAGCCTATGTTTGGTATCA+CGG + chr2_2:7911787-7911806 None:intergenic 40.0%
CCACATATGTAGCCTATGTT+TGG + chr2_2:7911795-7911814 None:intergenic 40.0%
CCAAACATAGGCTACATATG+TGG - chr2_2:7911792-7911811 Msa0235120:intron 40.0%
!! AATGGAAGTATCGGTCTACA+TGG + chr2_2:7911850-7911869 None:intergenic 40.0%
CCGTTTAGTGGCATACAATA+AGG - chr2_2:7911984-7912003 Msa0235120:intron 40.0%
ACAATAAGGGATTGACCACT+TGG - chr2_2:7911998-7912017 Msa0235120:intron 40.0%
CAATAAGGGATTGACCACTT+GGG - chr2_2:7911999-7912018 Msa0235120:intron 40.0%
ATTGACCACTTGGGCTAAAT+GGG - chr2_2:7912008-7912027 Msa0235120:intron 40.0%
! GGCACTTACTGATAATGAGT+AGG + chr2_2:7912087-7912106 None:intergenic 40.0%
GGACAACTTCAACCATTATC+AGG - chr2_2:7912264-7912283 Msa0235120:CDS 40.0%
GGATATGTTGACCCTGATAA+TGG + chr2_2:7912279-7912298 None:intergenic 40.0%
GATCACCACTATAGGAAGAA+GGG + chr2_2:7912413-7912432 None:intergenic 40.0%
TGATCACCACTATAGGAAGA+AGG + chr2_2:7912414-7912433 None:intergenic 40.0%
TACCAGGATTACCTGATACT+TGG - chr2_2:7912463-7912482 Msa0235120:CDS 40.0%
TTCCAAGTATCAGGTAATCC+TGG + chr2_2:7912468-7912487 None:intergenic 40.0%
ACATGTAGAGTGCAGCATAT+AGG + chr2_2:7912497-7912516 None:intergenic 40.0%
! GGGATTGTGACAAAGGGTTT+TGG + chr2_2:7906532-7906551 None:intergenic 45.0%
! TTGCACCCATTTGCTACTAC+TGG + chr2_2:7906785-7906804 None:intergenic 45.0%
CTTGGTAAGGCACATGAATC+AGG + chr2_2:7906941-7906960 None:intergenic 45.0%
CTGATTCATGTGCCTTACCA+AGG - chr2_2:7906939-7906958 Msa0235120:CDS 45.0%
ACAGTCTACAGTGACATTCC+AGG - chr2_2:7907569-7907588 Msa0235120:intron 45.0%
ATTATATACTCCCTCCGTCC+CGG - chr2_2:7908315-7908334 Msa0235120:intron 45.0%
GTAGGTCAATTATACCGGGA+CGG - chr2_2:7908524-7908543 Msa0235120:intron 45.0%
ATTTCATACTACCTCCGTCC+CGG + chr2_2:7908541-7908560 None:intergenic 45.0%
ACTTATCCCTGGAAGTTGAC+AGG - chr2_2:7909758-7909777 Msa0235120:intron 45.0%
! CTTGTAATCACAGGTTGGCA+TGG + chr2_2:7909796-7909815 None:intergenic 45.0%
GCCAACCTGTGATTACAAGT+TGG - chr2_2:7909797-7909816 Msa0235120:intron 45.0%
TCCCTCCAACTTGTAATCAC+AGG + chr2_2:7909805-7909824 None:intergenic 45.0%
! TGTGATTACAAGTTGGAGGG+AGG - chr2_2:7909804-7909823 Msa0235120:intron 45.0%
TTTCATACTACGGCCATCCA+CGG + chr2_2:7909960-7909979 None:intergenic 45.0%
! TGTCCAACATCGACTATGAG+TGG - chr2_2:7910624-7910643 Msa0235120:intron 45.0%
! AGTCTGAAATCCGTTAGGGT+CGG - chr2_2:7911097-7911116 Msa0235120:intron 45.0%
!! TGGTGTTGGTGTATTTGTGC+AGG - chr2_2:7911242-7911261 Msa0235120:intron 45.0%
GGTGTATTTGTGCAGGACTA+TGG - chr2_2:7911249-7911268 Msa0235120:intron 45.0%
ACATTGGACTCTATTGTCGC+TGG - chr2_2:7911342-7911361 Msa0235120:intron 45.0%
CTATTGTCGCTGGAAATGCA+TGG - chr2_2:7911352-7911371 Msa0235120:intron 45.0%
ATGGAAAGGAATGGACATGC+TGG - chr2_2:7911371-7911390 Msa0235120:intron 45.0%
ACCCACAAAGGATCATCACA+GGG - chr2_2:7911417-7911436 Msa0235120:intron 45.0%
TTGATTGGGATGCGATTGCA+TGG - chr2_2:7911647-7911666 Msa0235120:CDS 45.0%
TCCACCGTGATACCAAACAT+AGG - chr2_2:7911780-7911799 Msa0235120:intron 45.0%
CAAGAACATGGACCGTTTAG+TGG - chr2_2:7911972-7911991 Msa0235120:intron 45.0%
GATTGACCACTTGGGCTAAA+TGG - chr2_2:7912007-7912026 Msa0235120:intron 45.0%
ATCAACCCATTTAGCCCAAG+TGG + chr2_2:7912016-7912035 None:intergenic 45.0%
TTGTGACTTGAACAGGGGAA+AGG - chr2_2:7912212-7912231 Msa0235120:intron 45.0%
TCCTATAGTGGTGATCATGC+AGG - chr2_2:7912417-7912436 Msa0235120:CDS 45.0%
GTAATCCTGGTAAGCACCAA+TGG + chr2_2:7912455-7912474 None:intergenic 45.0%
! AGGAGTTGGTTCCAAGTATC+AGG + chr2_2:7912477-7912496 None:intergenic 45.0%
AGAGTGCAGCATATAGGAGT+TGG + chr2_2:7912491-7912510 None:intergenic 45.0%
!!! TAAAAATAAAAATTGATTTT+TGG - chr2_2:7908019-7908038 Msa0235120:intron 5.0%
!! AATATATTATATAAATTCAA+TGG - chr2_2:7909063-7909082 Msa0235120:intron 5.0%
!!! TATCATATTTTTTTTTATAA+AGG - chr2_2:7909345-7909364 Msa0235120:intron 5.0%
!!! ATCATATTTTTTTTTATAAA+GGG - chr2_2:7909346-7909365 Msa0235120:intron 5.0%
!! AAAATATATATTAAGATTTA+AGG - chr2_2:7912561-7912580 Msa0235120:five_prime_UTR 5.0%
!! AAATATATATTAAGATTTAA+GGG - chr2_2:7912562-7912581 Msa0235120:five_prime_UTR 5.0%
!! CTTGGTGTGGTGGGTGATAT+TGG + chr2_2:7906575-7906594 None:intergenic 50.0%
! CTTAGTCGGTTCTCTTGGTG+TGG + chr2_2:7906588-7906607 None:intergenic 50.0%
GGGCAGCTTGAATCATAGAG+AGG + chr2_2:7906845-7906864 None:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG + chr2_2:7908332-7908351 None:intergenic 50.0%
CTCCTTGCAGCTGCACTTTA+CGG + chr2_2:7909134-7909153 None:intergenic 50.0%
TCACAGCCTGTCAACTTCCA+GGG + chr2_2:7909767-7909786 None:intergenic 50.0%
TGGAAGTTGACAGGCTGTGA+GGG - chr2_2:7909767-7909786 Msa0235120:intron 50.0%
!! ATAGGTCCTTTTGGGAGGCA+GGG + chr2_2:7910778-7910797 None:intergenic 50.0%
!! TATAGGTCCTTTTGGGAGGC+AGG + chr2_2:7910779-7910798 None:intergenic 50.0%
AAACAACTAGGACTCGCGAG+AGG + chr2_2:7911050-7911069 None:intergenic 50.0%
CGTTGGACGAGTGCTTACAT+TGG - chr2_2:7911326-7911345 Msa0235120:intron 50.0%
GTCGCTGGAAATGCATGGAA+AGG - chr2_2:7911357-7911376 Msa0235120:intron 50.0%
GACCCACAAAGGATCATCAC+AGG - chr2_2:7911416-7911435 Msa0235120:intron 50.0%
CCCCTGTGATGATCCTTTGT+GGG + chr2_2:7911421-7911440 None:intergenic 50.0%
CCCACAAAGGATCATCACAG+GGG - chr2_2:7911418-7911437 Msa0235120:intron 50.0%
ACCCCTGTGATGATCCTTTG+TGG + chr2_2:7911422-7911441 None:intergenic 50.0%
GCCTATGTTTGGTATCACGG+TGG + chr2_2:7911784-7911803 None:intergenic 50.0%
ACTTGAACAGGGGAAAGGAG+TGG - chr2_2:7912217-7912236 Msa0235120:intron 50.0%
TCAGGGTCAACATATCCAGC+AGG - chr2_2:7912282-7912301 Msa0235120:CDS 50.0%
GCACACCCTTCTTCCTATAG+TGG - chr2_2:7912405-7912424 Msa0235120:CDS 50.0%
GCCTGCATGATCACCACTAT+AGG + chr2_2:7912421-7912440 None:intergenic 50.0%
CAGGCAATGATTGCAGCCAT+TGG - chr2_2:7912436-7912455 Msa0235120:CDS 50.0%
! GTCGGTTCTCTTGGTGTGGT+GGG + chr2_2:7906584-7906603 None:intergenic 55.0%
! AGTCGGTTCTCTTGGTGTGG+TGG + chr2_2:7906585-7906604 None:intergenic 55.0%
GTCAGTTATTCCGGGACGGA+GGG + chr2_2:7908328-7908347 None:intergenic 55.0%
GGTCAATTATACCGGGACGG+AGG - chr2_2:7908527-7908546 Msa0235120:intron 55.0%
CACCGTAAAGTGCAGCTGCA+AGG - chr2_2:7909129-7909148 Msa0235120:intron 55.0%
CTCACAGCCTGTCAACTTCC+AGG + chr2_2:7909768-7909787 None:intergenic 55.0%
CTGGAAGTTGACAGGCTGTG+AGG - chr2_2:7909766-7909785 Msa0235120:intron 55.0%
!! TGGCATTGGTGGACCCACAA+AGG - chr2_2:7911405-7911424 Msa0235120:intron 55.0%
CTTGATGGAGGTAGACCTGC+TGG + chr2_2:7912300-7912319 None:intergenic 55.0%
! TGCAGCCATTGGTGCTTACC+AGG - chr2_2:7912447-7912466 Msa0235120:CDS 55.0%
GGTCAGTTATTCCGGGACGG+AGG + chr2_2:7908329-7908348 None:intergenic 60.0%
CTGTCTCCCTGCCTCCCAAA+AGG - chr2_2:7910769-7910788 Msa0235120:intron 60.0%
CTGACAAGGGCCGACCCTAA+CGG + chr2_2:7911110-7911129 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 7906370 7912839 7906370 ID=Msa0235120;Name=Msa0235120
chr2_2 mRNA 7906370 7912839 7906370 ID=Msa0235120-mRNA-1;Parent=Msa0235120;Name=Msa0235120-mRNA-1;_AED=0.08;_eAED=0.08;_QI=307|1|1|1|1|1|5|321|360
chr2_2 exon 7906370 7906982 7906370 ID=Msa0235120-mRNA-1:exon:3460;Parent=Msa0235120-mRNA-1
chr2_2 exon 7907112 7907270 7907112 ID=Msa0235120-mRNA-1:exon:3459;Parent=Msa0235120-mRNA-1
chr2_2 exon 7907770 7907945 7907770 ID=Msa0235120-mRNA-1:exon:3458;Parent=Msa0235120-mRNA-1
chr2_2 exon 7911619 7911790 7911619 ID=Msa0235120-mRNA-1:exon:3457;Parent=Msa0235120-mRNA-1
chr2_2 exon 7912249 7912839 7912249 ID=Msa0235120-mRNA-1:exon:3456;Parent=Msa0235120-mRNA-1
chr2_2 five_prime_UTR 7912533 7912839 7912533 ID=Msa0235120-mRNA-1:five_prime_utr;Parent=Msa0235120-mRNA-1
chr2_2 CDS 7912249 7912532 7912249 ID=Msa0235120-mRNA-1:cds;Parent=Msa0235120-mRNA-1
chr2_2 CDS 7911619 7911790 7911619 ID=Msa0235120-mRNA-1:cds;Parent=Msa0235120-mRNA-1
chr2_2 CDS 7907770 7907945 7907770 ID=Msa0235120-mRNA-1:cds;Parent=Msa0235120-mRNA-1
chr2_2 CDS 7907112 7907270 7907112 ID=Msa0235120-mRNA-1:cds;Parent=Msa0235120-mRNA-1
chr2_2 CDS 7906691 7906982 7906691 ID=Msa0235120-mRNA-1:cds;Parent=Msa0235120-mRNA-1
chr2_2 three_prime_UTR 7906370 7906690 7906370 ID=Msa0235120-mRNA-1:three_prime_utr;Parent=Msa0235120-mRNA-1
Gene Sequence

>Msa0235120

ATGGGTTTCAGAGCAATTACTCTGCTTCTTCTATTCTCTCTTTTTCATCAACTTCTACTTGGTGAAGCAAAGTTCAGTAATGTAAGTAGCTTAAGAGGGAAAAAGCCAGTAGTAGCAAATGGGTGCAATTTGTTCATAGGAAGTTGGGTGGTTGACCCGTCTTATCCTCTCTATGATTCAAGCTGCCCCTTCATTGATCCTGAATTTAATTGTCAAAAATATGGAAGACCTGACAAACAATACCTCAAATACTCTTGGAAACCTGATTCATGTGCCTTACCAAGTTTTGACGGGAAAGATTTTCTGAACAAATGGAGGGGTAAGAAGATAATGTTTGTGGGTGATTCACTGAGTCTGAACATGTGGGAATCACTGTCTTGTATGATTCATGCGTCGGTGCCCAATGCAAAGACCAGCTTTTTAAGGAGAGAAGCACAGTCTACAGTGACATTCCAGGACTATGGAGTAACTATACAACTATACCGCACACCTTATTTGGTTGACATAATTCGAGAAAACGTTGGACGAGTGCTTACATTGGACTCTATTGTCGCTGGAAATGCATGGAAAGGAATGGACATGCTGGTTTTCAACTCATGGCATTGGTGGACCCACAAAGGATCATCACAGGGATGGGATTATATAAGAGATGGGTCTAAACTAGTCAAGAACATGGACCGTTTAGTGGCATACAATAAGGGATTGACCACTTGGGCTAAATGGGTTGATCTCAATGTTGATCCTACCAAAACTAAAGTCTTCTTTCAAGGCGTTTCTCCTACTCATTATCAGGGAAAGGAGTGGAATCAACCAAAAAATAGTTGTAGTGGACAACTTCAACCATTATCAGGGTCAACATATCCAGCAGGTCTACCTCCATCAAGTAACATATTGAACAATGTATTGAAGAGTATGAAAACACCAGTTTATCTACTTGATATTACACTTCTCTCACAACTAAGGAAAGATGCACACCCTTCTTCCTATAGTGGTGATCATGCAGGCAATGATTGCAGCCATTGGTGCTTACCAGGATTACCTGATACTTGGAACCAACTCCTATATGCTGCACTCTACATGTGA
Protein sequence

>Msa0235120

MGFRAITLLLLFSLFHQLLLGEAKFSNVSSLRGKKPVVANGCNLFIGSWVVDPSYPLYDSSCPFIDPEFNCQKYGRPDKQYLKYSWKPDSCALPSFDGKDFLNKWRGKKIMFVGDSLSLNMWESLSCMIHASVPNAKTSFLRREAQSTVTFQDYGVTIQLYRTPYLVDIIRENVGRVLTLDSIVAGNAWKGMDMLVFNSWHWWTHKGSSQGWDYIRDGSKLVKNMDRLVAYNKGLTTWAKWVDLNVDPTKTKVFFQGVSPTHYQGKEWNQPKNSCSGQLQPLSGSTYPAGLPPSSNILNNVLKSMKTPVYLLDITLLSQLRKDAHPSSYSGDHAGNDCSHWCLPGLPDTWNQLLYAALYM*