Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237470 | XP_003594059.2 | 98.409 | 880 | 14 | 0 | 1 | 880 | 1 | 880 | 0.0 | 1769 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237470 | sp|Q0WPJ7|RF298_ARATH | 37.431 | 903 | 434 | 20 | 5 | 879 | 14 | 813 | 5.21e-156 | 480 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237470 | G7IFN5 | 98.409 | 880 | 14 | 0 | 1 | 880 | 1 | 880 | 0.0 | 1769 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037120 | Msa0237470 | 0.802914 | 4.474864e-49 | -8.615850e-47 |
| Msa0077450 | Msa0237470 | 0.804391 | 2.209201e-49 | -8.615850e-47 |
| Msa0083090 | Msa0237470 | 0.818650 | 1.755175e-52 | -8.615850e-47 |
| Msa0084340 | Msa0237470 | 0.807632 | 4.597854e-50 | -8.615850e-47 |
| Msa0092440 | Msa0237470 | 0.818113 | 2.321979e-52 | -8.615850e-47 |
| Msa0129550 | Msa0237470 | 0.809796 | 1.585399e-50 | -8.615850e-47 |
| Msa0138210 | Msa0237470 | 0.842390 | 2.662240e-58 | -8.615850e-47 |
| Msa0143850 | Msa0237470 | 0.802939 | 4.421555e-49 | -8.615850e-47 |
| Msa0183420 | Msa0237470 | 0.803418 | 3.519974e-49 | -8.615850e-47 |
| Msa0189110 | Msa0237470 | 0.816796 | 4.598196e-52 | -8.615850e-47 |
| Msa0195710 | Msa0237470 | 0.959681 | 1.037516e-117 | -8.615850e-47 |
| Msa0200560 | Msa0237470 | 0.809546 | 1.793634e-50 | -8.615850e-47 |
| Msa0202730 | Msa0237470 | 0.823229 | 1.549769e-53 | -8.615850e-47 |
| Msa0231240 | Msa0237470 | 0.825262 | 5.160150e-54 | -8.615850e-47 |
| Msa0237470 | Msa0249100 | 0.801250 | 9.840543e-49 | -8.615850e-47 |
| Msa0237470 | Msa0269520 | 0.807778 | 4.280728e-50 | -8.615850e-47 |
| Msa0237470 | Msa0280150 | 0.815757 | 7.851313e-52 | -8.615850e-47 |
| Msa0237470 | Msa0281640 | 0.808974 | 2.378624e-50 | -8.615850e-47 |
| Msa0237470 | Msa0308560 | 0.819485 | 1.133350e-52 | -8.615850e-47 |
| Msa0237470 | Msa0320800 | 0.809017 | 2.328945e-50 | -8.615850e-47 |
| Msa0237470 | Msa0323370 | 0.823332 | 1.466248e-53 | -8.615850e-47 |
| Msa0237470 | Msa0347950 | 0.812327 | 4.482776e-51 | -8.615850e-47 |
| Msa0237470 | Msa0347990 | 0.803948 | 2.732117e-49 | -8.615850e-47 |
| Msa0237470 | Msa0390960 | 0.813574 | 2.389340e-51 | -8.615850e-47 |
| Msa0237470 | Msa0417650 | 0.841075 | 5.919816e-58 | -8.615850e-47 |
| Msa0237470 | Msa0417730 | 0.836124 | 1.124246e-56 | -8.615850e-47 |
| Msa0237470 | Msa0621650 | 0.874999 | 4.352524e-68 | -8.615850e-47 |
| Msa0237470 | Msa0698440 | 0.831153 | 1.961121e-55 | -8.615850e-47 |
| Msa0237470 | Msa0741160 | 0.807263 | 5.505963e-50 | -8.615850e-47 |
| Msa0237470 | Msa0763890 | 0.811301 | 7.498661e-51 | -8.615850e-47 |
| Msa0237470 | Msa0763920 | 0.808112 | 3.635073e-50 | -8.615850e-47 |
| Msa0237470 | Msa0780280 | 0.834623 | 2.692664e-56 | -8.615850e-47 |
| Msa0237470 | Msa0821800 | 0.825459 | 4.633062e-54 | -8.615850e-47 |
| Msa0237470 | Msa0861830 | 0.819301 | 1.248185e-52 | -8.615850e-47 |
| Msa0237470 | Msa0981310 | 0.813011 | 3.176264e-51 | -8.615850e-47 |
| Msa0237470 | Msa1109820 | 0.806124 | 9.578214e-50 | -8.615850e-47 |
| Msa0237470 | Msa1288450 | 0.810304 | 1.231790e-50 | -8.615850e-47 |
| Msa0237470 | Msa1333730 | 0.814110 | 1.819940e-51 | -8.615850e-47 |
| Msa0237470 | Msa1360200 | 0.959069 | 4.887694e-117 | -8.615850e-47 |
| Msa0237470 | Msa1366300 | 0.805721 | 1.164174e-49 | -8.615850e-47 |
| Msa0237470 | Msa1390350 | 0.803337 | 3.657954e-49 | -8.615850e-47 |
| Msa0237470 | Msa1401460 | 0.805097 | 1.573849e-49 | -8.615850e-47 |
| Msa0237470 | Msa1433220 | 0.814794 | 1.284726e-51 | -8.615850e-47 |
| Msa0237470 | Msa1437330 | 0.803166 | 3.969149e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237470 | MtrunA17_Chr2g0286891 | 98.409 | 880 | 14 | 0 | 1 | 880 | 1 | 880 | 0.0 | 1769 |
| Msa0237470 | MtrunA17_Chr1g0196471 | 33.938 | 772 | 381 | 19 | 117 | 877 | 75 | 728 | 2.42e-110 | 355 |
| Msa0237470 | MtrunA17_Chr4g0054731 | 42.297 | 357 | 193 | 4 | 519 | 875 | 389 | 732 | 2.14e-70 | 247 |
| Msa0237470 | MtrunA17_Chr4g0054731 | 44.295 | 149 | 61 | 2 | 118 | 245 | 77 | 224 | 8.25e-31 | 130 |
| Msa0237470 | MtrunA17_Chr4g0064071 | 40.667 | 150 | 52 | 1 | 519 | 668 | 126 | 238 | 9.82e-21 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0237470 | AT4G03000.1 | 37.431 | 903 | 434 | 20 | 5 | 879 | 14 | 813 | 5.29e-157 | 480 |
| Msa0237470 | AT4G03000.2 | 37.431 | 903 | 434 | 20 | 5 | 879 | 14 | 813 | 5.29e-157 | 480 |
| Msa0237470 | AT1G03365.1 | 37.614 | 880 | 454 | 20 | 15 | 880 | 24 | 822 | 3.39e-145 | 450 |
| Msa0237470 | AT1G03365.2 | 37.614 | 880 | 454 | 20 | 15 | 880 | 24 | 822 | 3.39e-145 | 450 |
| Msa0237470 | AT4G03000.4 | 34.855 | 723 | 344 | 19 | 5 | 699 | 14 | 637 | 7.84e-95 | 312 |
| Msa0237470 | AT4G03000.6 | 34.855 | 723 | 344 | 19 | 5 | 699 | 14 | 637 | 7.84e-95 | 312 |
| Msa0237470 | AT4G03000.3 | 34.855 | 723 | 344 | 19 | 5 | 699 | 14 | 637 | 2.41e-94 | 312 |
| Msa0237470 | AT4G03000.5 | 34.855 | 723 | 344 | 19 | 5 | 699 | 14 | 637 | 4.95e-94 | 312 |
| Msa0237470 | AT2G35330.2 | 41.341 | 358 | 192 | 5 | 522 | 875 | 363 | 706 | 5.09e-73 | 254 |
| Msa0237470 | AT2G35330.2 | 43.038 | 158 | 76 | 4 | 118 | 264 | 71 | 225 | 6.69e-29 | 124 |
| Msa0237470 | AT2G35330.1 | 41.341 | 358 | 192 | 5 | 522 | 875 | 390 | 733 | 5.47e-73 | 255 |
| Msa0237470 | AT2G35330.1 | 43.038 | 158 | 76 | 4 | 118 | 264 | 98 | 252 | 9.81e-29 | 124 |
| Msa0237470 | AT1G32530.1 | 36.798 | 356 | 207 | 5 | 524 | 875 | 365 | 706 | 1.45e-50 | 190 |
| Msa0237470 | AT1G32530.1 | 39.259 | 135 | 75 | 1 | 118 | 245 | 69 | 203 | 3.52e-24 | 109 |
Find 202 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGCACTCTTTAAGTTTA+TGG | 0.104247 | 2_2:+10639820 | None:intergenic |
| TATATTCCCAATTGCTTATA+AGG | 0.172965 | 2_2:-10642212 | None:intergenic |
| GTCGAAATTACCCCATGTTT+TGG | 0.242112 | 2_2:-10640853 | Msa0237470:CDS |
| TTGATTTGTTTGCAGCTAAA+TGG | 0.242428 | 2_2:-10641046 | Msa0237470:intron |
| TCGCTGCATAAACTACTTAA+AGG | 0.246936 | 2_2:+10640286 | None:intergenic |
| GATCTGAATGCATTATTCTA+TGG | 0.247944 | 2_2:+10637800 | None:intergenic |
| CCCATGATTGAAACTTCATT+TGG | 0.283994 | 2_2:+10639060 | None:intergenic |
| AGAAGTTGAACGACTTAAAA+AGG | 0.284434 | 2_2:-10639297 | Msa0237470:CDS |
| TAGCTTCAAGGACACGAAAA+AGG | 0.285731 | 2_2:-10638147 | Msa0237470:CDS |
| TCGGTTTCTGTTCAAGAAAA+AGG | 0.294425 | 2_2:-10640985 | Msa0237470:CDS |
| TGCAAGATTGTCCTTCTTGC+AGG | 0.326643 | 2_2:-10637923 | Msa0237470:CDS |
| TTCAGGGCTGATCCACCTTT+AGG | 0.327941 | 2_2:-10640943 | Msa0237470:CDS |
| TTAATAGCCTTATAAGCAAT+TGG | 0.329372 | 2_2:+10642205 | None:intergenic |
| TGAAGATGGTTCCGAGGGTT+CGG | 0.332368 | 2_2:-10639436 | Msa0237470:CDS |
| CAATTTGATCCTCTCCTCCT+TGG | 0.339110 | 2_2:+10638304 | None:intergenic |
| AGAATAATGCATTCAGATCT+TGG | 0.340113 | 2_2:-10637796 | Msa0237470:three_prime_UTR |
| GTCCATTATTAGATGAGAAA+TGG | 0.349080 | 2_2:+10639744 | None:intergenic |
| CAGGGGAGATTGAGAGGTTC+CGG | 0.352299 | 2_2:+10640042 | None:intergenic |
| TTGTGCTATGTGTTGAGCTT+GGG | 0.352708 | 2_2:+10642176 | None:intergenic |
| ACCCATTTCTCATCTAATAA+TGG | 0.356305 | 2_2:-10639746 | Msa0237470:CDS |
| CCATGATTGAAACTTCATTT+GGG | 0.356844 | 2_2:+10639061 | None:intergenic |
| TCAGGGCTGATCCACCTTTA+GGG | 0.358652 | 2_2:-10640942 | Msa0237470:CDS |
| GTAGAAATAAGAGAAAATTC+AGG | 0.361206 | 2_2:-10640960 | Msa0237470:CDS |
| GAATTACATCTTGGCCGAAT+TGG | 0.379171 | 2_2:-10640416 | Msa0237470:CDS |
| GAATCAGAAATCGTTGTTAC+AGG | 0.382061 | 2_2:-10639036 | Msa0237470:CDS |
| TCAAATTCGCGGTGGACTCT+TGG | 0.382780 | 2_2:-10640119 | Msa0237470:CDS |
| TTAAGACCCGGCATCTGTTA+TGG | 0.386085 | 2_2:-10640550 | Msa0237470:CDS |
| GAAGATGGTTCCGAGGGTTC+GGG | 0.388461 | 2_2:-10639435 | Msa0237470:CDS |
| CTTGCATTCCCTGCTTCTCA+TGG | 0.393218 | 2_2:+10637940 | None:intergenic |
| GTTTGTCAATCTTCTTCAAT+CGG | 0.395767 | 2_2:-10642042 | Msa0237470:five_prime_UTR |
| TCTCTTTCATTGTCTTCAAA+AGG | 0.400450 | 2_2:-10639581 | Msa0237470:CDS |
| CAAGGAGGAGAGGATCAAAT+TGG | 0.404486 | 2_2:-10638303 | Msa0237470:CDS |
| GACAAGTCATCTAATGCTTC+CGG | 0.404497 | 2_2:-10640061 | Msa0237470:CDS |
| TCTGTAGCTGATAATGCATC+TGG | 0.405226 | 2_2:+10639614 | None:intergenic |
| GATTTCTCAGATTGAGTGCC+TGG | 0.408635 | 2_2:+10640160 | None:intergenic |
| TAGAATCCAGGCTAAATGTT+GGG | 0.410933 | 2_2:+10639714 | None:intergenic |
| AGGCTAAATGTTGGGGTAGA+TGG | 0.414356 | 2_2:+10639722 | None:intergenic |
| TTCTGAGATGGAAAATGCCT+TGG | 0.415309 | 2_2:-10639237 | Msa0237470:CDS |
| ATTGTATAACTGAGATTTAG+AGG | 0.422013 | 2_2:-10641723 | Msa0237470:intron |
| GGACTACTGACTGCTGGTAT+AGG | 0.422320 | 2_2:+10639638 | None:intergenic |
| CTGCAGTTTCATCTGAGGTC+AGG | 0.425266 | 2_2:-10640750 | Msa0237470:CDS |
| TTTGTGCTATGTGTTGAGCT+TGG | 0.430969 | 2_2:+10642175 | None:intergenic |
| CAGCAGAGAATTCATAACTT+AGG | 0.431980 | 2_2:+10640881 | None:intergenic |
| TTCTTGCAGGAGCCCCATCC+AGG | 0.433423 | 2_2:-10637910 | Msa0237470:CDS |
| TAACAGTCAAATGTCTTCTT+CGG | 0.438296 | 2_2:-10641004 | Msa0237470:CDS |
| TAATAGCCTTATAAGCAATT+GGG | 0.440927 | 2_2:+10642206 | None:intergenic |
| AGATGAGTTGATTCTGAAGA+TGG | 0.442092 | 2_2:-10639450 | Msa0237470:CDS |
| CCCAAATGAAGTTTCAATCA+TGG | 0.443366 | 2_2:-10639061 | Msa0237470:CDS |
| AAGCTATGCCGGTAGCTTCA+AGG | 0.448095 | 2_2:-10638159 | Msa0237470:CDS |
| ATGCATTCAGATCTTGGATC+TGG | 0.448154 | 2_2:-10637790 | Msa0237470:three_prime_UTR |
| CGCTGCATAAACTACTTAAA+GGG | 0.448414 | 2_2:+10640287 | None:intergenic |
| TATAAACATAAGCAAGGCAG+TGG | 0.448971 | 2_2:-10639798 | Msa0237470:CDS |
| ACAGAAATTCGCTCCTGGAT+GGG | 0.450372 | 2_2:+10637897 | None:intergenic |
| TGTCTCATGGACTTGTCATA+TGG | 0.455279 | 2_2:+10639494 | None:intergenic |
| TTGAAGACAATGAAAGAGAA+AGG | 0.455334 | 2_2:+10639585 | None:intergenic |
| CAGAAATTCGCTCCTGGATG+GGG | 0.459004 | 2_2:+10637898 | None:intergenic |
| CGAGCTTCAGAATTACATCT+TGG | 0.459109 | 2_2:-10640425 | Msa0237470:CDS |
| CACCGCGTCTATTTCAGAAC+TGG | 0.460689 | 2_2:-10638102 | Msa0237470:CDS |
| GGCTGCTCGTCGACTGAGTA+AGG | 0.463847 | 2_2:-10639357 | Msa0237470:CDS |
| TTGAAGAACGCAAACCAATT+CGG | 0.464489 | 2_2:+10640402 | None:intergenic |
| TTTGTCAATCTTCTTCAATC+GGG | 0.466422 | 2_2:-10642041 | Msa0237470:intron |
| TTGAGTCCCATGGCGCTGAT+TGG | 0.468361 | 2_2:-10640696 | Msa0237470:CDS |
| ACTTGTTATTACAGCAGATA+GGG | 0.468592 | 2_2:+10639543 | None:intergenic |
| TATCGGACATACGGGTCTAA+AGG | 0.468738 | 2_2:-10639923 | Msa0237470:CDS |
| TCCATTATTAGATGAGAAAT+GGG | 0.470325 | 2_2:+10639745 | None:intergenic |
| ATCGGACATACGGGTCTAAA+GGG | 0.472374 | 2_2:-10639922 | Msa0237470:CDS |
| CAATGAGCTCCATGAGAAGC+AGG | 0.473165 | 2_2:-10637949 | Msa0237470:CDS |
| ATCTACCCCAACATTTAGCC+TGG | 0.474786 | 2_2:-10639720 | Msa0237470:CDS |
| AAAATGTGGGATTGTTAGAA+AGG | 0.475135 | 2_2:-10640011 | Msa0237470:CDS |
| GATGGCTTGAAGCTCGACCT+TGG | 0.477990 | 2_2:-10640784 | Msa0237470:CDS |
| TTTCGTGTCCTTGAAGCTAC+CGG | 0.478278 | 2_2:+10638151 | None:intergenic |
| TGGTTTGAGTGGTTTAATCC+TGG | 0.479762 | 2_2:-10639876 | Msa0237470:CDS |
| CCCTCTTGGTGCTACTCGAA+TGG | 0.480575 | 2_2:+10639987 | None:intergenic |
| GGAATTGAATTACAAGGACT+TGG | 0.484319 | 2_2:+10640184 | None:intergenic |
| GATCAAATTGGAAGCGGAGA+AGG | 0.484375 | 2_2:-10638291 | Msa0237470:CDS |
| GACTTGTTATTACAGCAGAT+AGG | 0.486606 | 2_2:+10639542 | None:intergenic |
| TTTGCGTTCTTCAAGAGGTT+AGG | 0.489276 | 2_2:-10640393 | Msa0237470:CDS |
| GTTAGCCACGGTTGTTCTGA+TGG | 0.489726 | 2_2:-10640802 | Msa0237470:CDS |
| TTCTGAAATAGACGCGGTGT+GGG | 0.490115 | 2_2:+10638106 | None:intergenic |
| GGCAAATCAAAAGGTGATGC+AGG | 0.491344 | 2_2:-10639378 | Msa0237470:CDS |
| GACAGAGTGGGCAAATCAAA+AGG | 0.495082 | 2_2:-10639387 | Msa0237470:CDS |
| TCTGAGATGGAAAATGCCTT+GGG | 0.495498 | 2_2:-10639236 | Msa0237470:CDS |
| CACAGAAATTCGCTCCTGGA+TGG | 0.502512 | 2_2:+10637896 | None:intergenic |
| CTCTTACTTGACTCCCCTAA+AGG | 0.502873 | 2_2:+10640928 | None:intergenic |
| TAGAAATAAGAGAAAATTCA+GGG | 0.503963 | 2_2:-10640959 | Msa0237470:CDS |
| TGCAAAATGAACTTCAAGAA+TGG | 0.504403 | 2_2:-10639409 | Msa0237470:CDS |
| ATCACAGGCTAAACGGCGGC+AGG | 0.504970 | 2_2:-10638408 | Msa0237470:intron |
| CAGGGCTGATCCACCTTTAG+GGG | 0.505454 | 2_2:-10640941 | Msa0237470:CDS |
| GAACGGAGGAGGTGTGAAAC+GGG | 0.507987 | 2_2:-10638054 | Msa0237470:CDS |
| ATATATTACTTTCAATGCAA+AGG | 0.510068 | 2_2:-10637753 | Msa0237470:three_prime_UTR |
| ATCTGAATGCATTATTCTAT+GGG | 0.513965 | 2_2:+10637801 | None:intergenic |
| CTGACCTCAGATGAAACTGC+AGG | 0.516905 | 2_2:+10640751 | None:intergenic |
| ATCACTCCAATCAGCGCCAT+GGG | 0.517228 | 2_2:+10640690 | None:intergenic |
| CCAAATGAAGTTTCAATCAT+GGG | 0.518136 | 2_2:-10639060 | Msa0237470:CDS |
| CTTCTAATTCCTCCTTAGGC+TGG | 0.519710 | 2_2:+10640722 | None:intergenic |
| GAGGAGGTGTGAAACGGGAA+AGG | 0.521023 | 2_2:-10638049 | Msa0237470:CDS |
| GGAATCGATGGAAGCTATGC+CGG | 0.523339 | 2_2:-10638170 | Msa0237470:CDS |
| GAAAATGCCTTGGGTAAAGC+AGG | 0.524830 | 2_2:-10639227 | Msa0237470:CDS |
| AACGCACAGAAATTCGCTCC+TGG | 0.525525 | 2_2:+10637892 | None:intergenic |
| AGGAGGTGTGAAACGGGAAA+GGG | 0.525773 | 2_2:-10638048 | Msa0237470:CDS |
| TTTGCATCCATAACAGATGC+CGG | 0.526633 | 2_2:+10640543 | None:intergenic |
| TTGCAGCTAAATGGCATCAC+TGG | 0.527853 | 2_2:-10641037 | Msa0237470:intron |
| GGAGTGCGTGATGTGCCTTT+CGG | 0.528749 | 2_2:-10638027 | Msa0237470:CDS |
| CTGTAGCTGATAATGCATCT+GGG | 0.529420 | 2_2:+10639615 | None:intergenic |
| AGTTTATGCAGCGATGGCAT+TGG | 0.532146 | 2_2:-10640277 | Msa0237470:CDS |
| TCACATAGTAGTAGTTGTGT+GGG | 0.533038 | 2_2:-10639521 | Msa0237470:CDS |
| TGAACGGAGGAGGTGTGAAA+CGG | 0.533156 | 2_2:-10638055 | Msa0237470:CDS |
| TGCAGCGATGGCATTGGTGA+TGG | 0.533644 | 2_2:-10640271 | Msa0237470:CDS |
| ATTTCTCAGATTGAGTGCCT+GGG | 0.536057 | 2_2:+10640161 | None:intergenic |
| CTAGAATCCAGGCTAAATGT+TGG | 0.536588 | 2_2:+10639713 | None:intergenic |
| TTAAATAACTTCTCTATGAA+CGG | 0.538843 | 2_2:-10638071 | Msa0237470:CDS |
| CACTGAAGATGTTGCTACAA+AGG | 0.538959 | 2_2:-10640578 | Msa0237470:CDS |
| GGAAAGCTGAGTGGTTTGAG+TGG | 0.539286 | 2_2:-10639887 | Msa0237470:CDS |
| TTGGGGCAACCATTGTCTCA+TGG | 0.541430 | 2_2:+10639481 | None:intergenic |
| AAGAGAACAAATTGAGGAGT+CGG | 0.541615 | 2_2:-10638333 | Msa0237470:CDS |
| TGTGCTATGTGTTGAGCTTG+GGG | 0.543136 | 2_2:+10642177 | None:intergenic |
| GCTGTGACTTGCCCAAAACA+TGG | 0.543592 | 2_2:+10640841 | None:intergenic |
| AAATAGTATCACTAGAATCC+AGG | 0.544420 | 2_2:+10639702 | None:intergenic |
| GGTCAGGCTTAGCCAGCCTA+AGG | 0.548390 | 2_2:-10640734 | Msa0237470:CDS |
| AACAGAAGAACTTCTCTCCA+TGG | 0.554042 | 2_2:-10638375 | Msa0237470:CDS |
| TGAGGAGTCGGCTAGAACCA+AGG | 0.554113 | 2_2:-10638321 | Msa0237470:CDS |
| TTGTAGCAGGGGAGATTGAG+AGG | 0.555103 | 2_2:+10640036 | None:intergenic |
| AAAAGAAAGAGAACAAATTG+AGG | 0.556625 | 2_2:-10638339 | Msa0237470:CDS |
| AACTTCTCTATGAACGGAGG+AGG | 0.562509 | 2_2:-10638065 | Msa0237470:CDS |
| ATTGGTTTGCGTTCTTCAAG+AGG | 0.562855 | 2_2:-10640398 | Msa0237470:CDS |
| AGGCTGAGCTTAAGACACTA+AGG | 0.563919 | 2_2:-10639331 | Msa0237470:CDS |
| CTGTGACTTGCCCAAAACAT+GGG | 0.565277 | 2_2:+10640842 | None:intergenic |
| AGTGCAAGCGGAGCAATTCG+AGG | 0.565932 | 2_2:-10638952 | Msa0237470:intron |
| TTGCATCCATAACAGATGCC+GGG | 0.569511 | 2_2:+10640544 | None:intergenic |
| ACCACTTCTAATTCCTCCTT+AGG | 0.570887 | 2_2:+10640718 | None:intergenic |
| GTCACATAGTAGTAGTTGTG+TGG | 0.572984 | 2_2:-10639522 | Msa0237470:CDS |
| GGAGAGGATCAAATTGGAAG+CGG | 0.573756 | 2_2:-10638297 | Msa0237470:CDS |
| CGGCTAGAACCAAGGAGGAG+AGG | 0.575165 | 2_2:-10638313 | Msa0237470:CDS |
| TTAAAATAGTGCTCTCGTGA+AGG | 0.587307 | 2_2:+10640457 | None:intergenic |
| GATCACTCCAATCAGCGCCA+TGG | 0.587469 | 2_2:+10640689 | None:intergenic |
| TGCAGTACGGAAGCTCGAGA+TGG | 0.587948 | 2_2:-10639180 | Msa0237470:CDS |
| TTAGAAGTGGTTGAGTCCCA+TGG | 0.588976 | 2_2:-10640706 | Msa0237470:CDS |
| CTTGTTATTACAGCAGATAG+GGG | 0.590136 | 2_2:+10639544 | None:intergenic |
| TTGTCCACCTGCTTTACCCA+AGG | 0.591973 | 2_2:+10639220 | None:intergenic |
| TGGATGGGGCTCCTGCAAGA+AGG | 0.592363 | 2_2:+10637912 | None:intergenic |
| TGCTGCATTGAGGAAAGAGA+TGG | 0.592537 | 2_2:-10639153 | Msa0237470:CDS |
| TTAAGTAGTTTATGCAGCGA+TGG | 0.592929 | 2_2:-10640283 | Msa0237470:CDS |
| CAGGCTTAGCCAGCCTAAGG+AGG | 0.593792 | 2_2:-10640731 | Msa0237470:CDS |
| ATCAGCAACAAACTTTCAAG+AGG | 0.595207 | 2_2:-10639105 | Msa0237470:CDS |
| AAAGCAAGCCGAAGTGCAAG+CGG | 0.595548 | 2_2:-10638964 | Msa0237470:CDS |
| GACTTGTGCACTGTTAGCCA+CGG | 0.596382 | 2_2:-10640814 | Msa0237470:CDS |
| GGGTAAAGCAGGTGGACAAG+TGG | 0.599397 | 2_2:-10639216 | Msa0237470:CDS |
| GTTCTGAAATAGACGCGGTG+TGG | 0.599691 | 2_2:+10638105 | None:intergenic |
| CAAGATGTAATTCTGAAGCT+CGG | 0.607013 | 2_2:+10640426 | None:intergenic |
| GCAGAAAATTCTCAAATTCG+CGG | 0.611943 | 2_2:-10640130 | Msa0237470:CDS |
| TGATTCTGAAGATGGTTCCG+AGG | 0.613147 | 2_2:-10639442 | Msa0237470:CDS |
| CGTGTCACATGCTTGTGCAA+TGG | 0.613972 | 2_2:-10640317 | Msa0237470:CDS |
| TTTCTCAGATTGAGTGCCTG+GGG | 0.616223 | 2_2:+10640162 | None:intergenic |
| GCTATGTGTTGAGCTTGGGG+AGG | 0.616848 | 2_2:+10642180 | None:intergenic |
| AGAATCCAGGCTAAATGTTG+GGG | 0.617379 | 2_2:+10639715 | None:intergenic |
| CTGCAGGGCTAGATAATCCA+AGG | 0.619620 | 2_2:+10640767 | None:intergenic |
| GATTCTGAAGATGGTTCCGA+GGG | 0.620356 | 2_2:-10639441 | Msa0237470:CDS |
| GCCTAAGGAGGAATTAGAAG+TGG | 0.621473 | 2_2:-10640719 | Msa0237470:CDS |
| TAGCCCTGCAGTTTCATCTG+AGG | 0.622105 | 2_2:-10640755 | Msa0237470:CDS |
| TCACATGCTTGTGCAATGGA+TGG | 0.625176 | 2_2:-10640313 | Msa0237470:CDS |
| TGTAGCTGATAATGCATCTG+GGG | 0.627271 | 2_2:+10639616 | None:intergenic |
| AGATGGAGAATGCTGCATTG+AGG | 0.628423 | 2_2:-10639163 | Msa0237470:CDS |
| TGCTTCTATAAACATAAGCA+AGG | 0.629751 | 2_2:-10639804 | Msa0237470:CDS |
| TTACTTGACTCCCCTAAAGG+TGG | 0.630430 | 2_2:+10640931 | None:intergenic |
| CAAATTGGCACAGATATCGA+AGG | 0.631352 | 2_2:-10638991 | Msa0237470:CDS |
| ATGACAAGTCCATGAGACAA+TGG | 0.637572 | 2_2:-10639490 | Msa0237470:CDS |
| CAAACAACTTGATGTGCACA+TGG | 0.640114 | 2_2:+10637981 | None:intergenic |
| AACTTCAAGAATGGACAGAG+TGG | 0.640249 | 2_2:-10639400 | Msa0237470:CDS |
| ACAAAGGCTATGTTAAGACC+CGG | 0.640984 | 2_2:-10640562 | Msa0237470:CDS |
| ATGGCATCACTGGTTGTCAG+TGG | 0.643711 | 2_2:-10641027 | Msa0237470:CDS |
| CCATTCGAGTAGCACCAAGA+GGG | 0.645720 | 2_2:-10639987 | Msa0237470:CDS |
| GGGTCTAAAGGGTCTTCAAG+AGG | 0.646096 | 2_2:-10639911 | Msa0237470:CDS |
| GAATTGCTCCGCTTGCACTT+CGG | 0.649365 | 2_2:+10638956 | None:intergenic |
| AATGCCTTGGGTAAAGCAGG+TGG | 0.652750 | 2_2:-10639224 | Msa0237470:CDS |
| TCCATTCGAGTAGCACCAAG+AGG | 0.654219 | 2_2:-10639988 | Msa0237470:CDS |
| ACTTCAAGAATGGACAGAGT+GGG | 0.655947 | 2_2:-10639399 | Msa0237470:CDS |
| ATAAACATAAGCAAGGCAGT+GGG | 0.657479 | 2_2:-10639797 | Msa0237470:CDS |
| TGACCTCAGATGAAACTGCA+GGG | 0.658780 | 2_2:+10640752 | None:intergenic |
| TGTGACTTGCCCAAAACATG+GGG | 0.662318 | 2_2:+10640843 | None:intergenic |
| TAAGATCGATCTTAGAACAT+CGG | 0.662677 | 2_2:+10642074 | None:intergenic |
| TCTAAAGGGTCTTCAAGAGG+AGG | 0.662790 | 2_2:-10639908 | Msa0237470:CDS |
| CAACAGACATCTCTTCCGAA+AGG | 0.663930 | 2_2:+10638012 | None:intergenic |
| AACGAGCTAATACTGCAGTA+CGG | 0.665440 | 2_2:-10639193 | Msa0237470:CDS |
| TTCTCAGATTGAGTGCCTGG+GGG | 0.666069 | 2_2:+10640163 | None:intergenic |
| TCAGTTTCGGAGATGCAATG+TGG | 0.669957 | 2_2:-10640363 | Msa0237470:CDS |
| TCTGAAATAGACGCGGTGTG+GGG | 0.671611 | 2_2:+10638107 | None:intergenic |
| GAAAATTCTCAAATTCGCGG+TGG | 0.674479 | 2_2:-10640127 | Msa0237470:CDS |
| TCAATCTGAGAAATCCGTTG+TGG | 0.679156 | 2_2:-10640152 | Msa0237470:CDS |
| AATGAGCTCCATGAGAAGCA+GGG | 0.679279 | 2_2:-10637948 | Msa0237470:CDS |
| TCGTCGACTGAGTAAGGACA+AGG | 0.681425 | 2_2:-10639351 | Msa0237470:CDS |
| TGCATTGAGGAAAGAGATGG+AGG | 0.682188 | 2_2:-10639150 | Msa0237470:CDS |
| CACATAGTAGTAGTTGTGTG+GGG | 0.682224 | 2_2:-10639520 | Msa0237470:CDS |
| GGAGGCTGCTAAGTTACGTG+CGG | 0.686850 | 2_2:-10639132 | Msa0237470:CDS |
| AACCAGTTCTGAAATAGACG+CGG | 0.688246 | 2_2:+10638100 | None:intergenic |
| TCAAGAGGAGGAAAGCTGAG+TGG | 0.691060 | 2_2:-10639896 | Msa0237470:CDS |
| GTAGCTGATAATGCATCTGG+GGG | 0.692281 | 2_2:+10639617 | None:intergenic |
| AATAACTTCTCTATGAACGG+AGG | 0.693247 | 2_2:-10638068 | Msa0237470:CDS |
| TCAAGCCATCAGAACAACCG+TGG | 0.719058 | 2_2:+10640797 | None:intergenic |
| TCGTCAGAAGTCAATCCACG+TGG | 0.728301 | 2_2:-10639954 | Msa0237470:CDS |
| AAATATCACAGGCTAAACGG+CGG | 0.736276 | 2_2:-10638412 | Msa0237470:intron |
| ATTATTCTATGGGAGTCCCG+AGG | 0.739410 | 2_2:+10637811 | None:intergenic |
| GGAGTCGGCTAGAACCAAGG+AGG | 0.754094 | 2_2:-10638318 | Msa0237470:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAAAATAAAATAAACAG+AGG | - | chr2_2:10637786-10637805 | Msa0237470:three_prime_UTR | 15.0% |
| !!! | GAAAAATCAATGTTTTTTTT+AGG | + | chr2_2:10637837-10637856 | None:intergenic | 15.0% |
| !! | TTATGTAATTGAATTCAATT+GGG | - | chr2_2:10638061-10638080 | Msa0237470:CDS | 15.0% |
| !!! | AGTTTTTAATTTTTTTCAAC+TGG | - | chr2_2:10638091-10638110 | Msa0237470:CDS | 15.0% |
| !!! | GTTTTTAATTTTTTTCAACT+GGG | - | chr2_2:10638092-10638111 | Msa0237470:CDS | 15.0% |
| !!! | AAATTTTCATATAACTACTT+AGG | + | chr2_2:10641255-10641274 | None:intergenic | 15.0% |
| !! | GTTATGTAATTGAATTCAAT+TGG | - | chr2_2:10638060-10638079 | Msa0237470:CDS | 20.0% |
| !!! | TTTTTTAATCTGATTGTTTC+AGG | - | chr2_2:10638180-10638199 | Msa0237470:CDS | 20.0% |
| !!! | ATAATGCTATCAAATTTGTT+GGG | - | chr2_2:10638349-10638368 | Msa0237470:CDS | 20.0% |
| !! | TAGAAATAAGAGAAAATTCA+GGG | - | chr2_2:10638983-10639002 | Msa0237470:CDS | 20.0% |
| !!! | ATAAAAAAAATTGTTGCTTG+TGG | - | chr2_2:10639338-10639357 | Msa0237470:CDS | 20.0% |
| !! | AAAAGCTGAAATAAAAAGTT+CGG | - | chr2_2:10639724-10639743 | Msa0237470:CDS | 20.0% |
| !! | AATGACTGAAAAAAACAAAT+TGG | - | chr2_2:10640936-10640955 | Msa0237470:CDS | 20.0% |
| !! | TAAATGTTGGTATTAATATC+TGG | + | chr2_2:10641067-10641086 | None:intergenic | 20.0% |
| !! | ATATAACTACTTAGGTATAA+AGG | + | chr2_2:10641247-10641266 | None:intergenic | 20.0% |
| !! | TTAAATAACTTCTCTATGAA+CGG | - | chr2_2:10641871-10641890 | Msa0237470:intron | 20.0% |
| !! | ATATATTACTTTCAATGCAA+AGG | - | chr2_2:10642189-10642208 | Msa0237470:five_prime_UTR | 20.0% |
| !!! | TAATAGCCTTATAAGCAATT+GGG | + | chr2_2:10637739-10637758 | None:intergenic | 25.0% |
| !!! | TTAATAGCCTTATAAGCAAT+TGG | + | chr2_2:10637740-10637759 | None:intergenic | 25.0% |
| !! | ACTCTGAATTTTTCTTCAAT+TGG | - | chr2_2:10637957-10637976 | Msa0237470:CDS | 25.0% |
| !! | CTCTGAATTTTTCTTCAATT+GGG | - | chr2_2:10637958-10637977 | Msa0237470:CDS | 25.0% |
| !! | TCTGAATTTTTCTTCAATTG+GGG | - | chr2_2:10637959-10637978 | Msa0237470:CDS | 25.0% |
| ! | ATTGTATAACTGAGATTTAG+AGG | - | chr2_2:10638219-10638238 | Msa0237470:CDS | 25.0% |
| ! | GCATTATCAATCAACAAAAA+GGG | + | chr2_2:10638336-10638355 | None:intergenic | 25.0% |
| ! | AGCATTATCAATCAACAAAA+AGG | + | chr2_2:10638337-10638356 | None:intergenic | 25.0% |
| ! | GATAATGCTATCAAATTTGT+TGG | - | chr2_2:10638348-10638367 | Msa0237470:CDS | 25.0% |
| ! | TCTTTCAAGCTATGTAAATA+TGG | - | chr2_2:10638808-10638827 | Msa0237470:intron | 25.0% |
| !!! | AATCACAAGTTGATTAGTTT+CGG | + | chr2_2:10638835-10638854 | None:intergenic | 25.0% |
| ! | GTAGAAATAAGAGAAAATTC+AGG | - | chr2_2:10638982-10639001 | Msa0237470:CDS | 25.0% |
| !! | TTTTATTGCACTCTTGAAAA+TGG | + | chr2_2:10639324-10639343 | None:intergenic | 25.0% |
| !!! | ACTTTAGCTTTTTTGAGAAA+CGG | - | chr2_2:10639449-10639468 | Msa0237470:CDS | 25.0% |
| !!! | CTGATTTAAGTTTTTTATCC+AGG | + | chr2_2:10640087-10640106 | None:intergenic | 25.0% |
| ! | TCCATTATTAGATGAGAAAT+GGG | + | chr2_2:10640200-10640219 | None:intergenic | 25.0% |
| ! | GTAATGTTAAATGAATCACT+TGG | - | chr2_2:10641407-10641426 | Msa0237470:intron | 25.0% |
| !! | CTTAATGAGTTTGTGTTATT+GGG | - | chr2_2:10641486-10641505 | Msa0237470:intron | 25.0% |
| ! | TTGTAAAGGAAAAATATCAC+AGG | - | chr2_2:10641519-10641538 | Msa0237470:intron | 25.0% |
| ! | AAAAGAAAGAGAACAAATTG+AGG | - | chr2_2:10641603-10641622 | Msa0237470:intron | 25.0% |
| !!! | CAATTTCTTTTTCAAGTTTC+TGG | + | chr2_2:10641702-10641721 | None:intergenic | 25.0% |
| ! | ATCTGAATGCATTATTCTAT+GGG | + | chr2_2:10642144-10642163 | None:intergenic | 25.0% |
| TAAGATCGATCTTAGAACAT+CGG | + | chr2_2:10637871-10637890 | None:intergenic | 30.0% | |
| GTTTGTCAATCTTCTTCAAT+CGG | - | chr2_2:10637900-10637919 | Msa0237470:CDS | 30.0% | |
| TTTGTCAATCTTCTTCAATC+GGG | - | chr2_2:10637901-10637920 | Msa0237470:CDS | 30.0% | |
| ! | AGATTACTTGTGCATGTTTT+TGG | - | chr2_2:10638127-10638146 | Msa0237470:CDS | 30.0% |
| ! | GATTACTTGTGCATGTTTTT+GGG | - | chr2_2:10638128-10638147 | Msa0237470:CDS | 30.0% |
| TGGCAAAATGAAAATCAACA+AGG | + | chr2_2:10638381-10638400 | None:intergenic | 30.0% | |
| CAAGTACTATCAAAACGTAA+TGG | + | chr2_2:10638401-10638420 | None:intergenic | 30.0% | |
| !! | CATTACGTTTTGATAGTACT+TGG | - | chr2_2:10638399-10638418 | Msa0237470:CDS | 30.0% |
| !! | GTTTTGATAGTACTTGGTTT+TGG | - | chr2_2:10638405-10638424 | Msa0237470:intron | 30.0% |
| !! | ATCACAAGTTGATTAGTTTC+GGG | + | chr2_2:10638834-10638853 | None:intergenic | 30.0% |
| !! | TTGATTTGTTTGCAGCTAAA+TGG | - | chr2_2:10638896-10638915 | Msa0237470:intron | 30.0% |
| TAACAGTCAAATGTCTTCTT+CGG | - | chr2_2:10638938-10638957 | Msa0237470:intron | 30.0% | |
| AAAATGTGGGATTGTTAGAA+AGG | - | chr2_2:10639931-10639950 | Msa0237470:CDS | 30.0% | |
| GAAAAAAGTTATCGGACATA+CGG | - | chr2_2:10640010-10640029 | Msa0237470:CDS | 30.0% | |
| AAAAAAGTTATCGGACATAC+GGG | - | chr2_2:10640011-10640030 | Msa0237470:CDS | 30.0% | |
| !! | AGAAGCACTCTTTAAGTTTA+TGG | + | chr2_2:10640125-10640144 | None:intergenic | 30.0% |
| TGCTTCTATAAACATAAGCA+AGG | - | chr2_2:10640138-10640157 | Msa0237470:CDS | 30.0% | |
| ACCCATTTCTCATCTAATAA+TGG | - | chr2_2:10640196-10640215 | Msa0237470:CDS | 30.0% | |
| GTCCATTATTAGATGAGAAA+TGG | + | chr2_2:10640201-10640220 | None:intergenic | 30.0% | |
| AAATAGTATCACTAGAATCC+AGG | + | chr2_2:10640243-10640262 | None:intergenic | 30.0% | |
| TTGAAGACAATGAAAGAGAA+AGG | + | chr2_2:10640360-10640379 | None:intergenic | 30.0% | |
| TCTCTTTCATTGTCTTCAAA+AGG | - | chr2_2:10640361-10640380 | Msa0237470:CDS | 30.0% | |
| !! | ACTTGTTATTACAGCAGATA+GGG | + | chr2_2:10640402-10640421 | None:intergenic | 30.0% |
| ! | AACTCATCTTTTCTATCTTG+GGG | + | chr2_2:10640481-10640500 | None:intergenic | 30.0% |
| ! | CAACTCATCTTTTCTATCTT+GGG | + | chr2_2:10640482-10640501 | None:intergenic | 30.0% |
| ! | TCAACTCATCTTTTCTATCT+TGG | + | chr2_2:10640483-10640502 | None:intergenic | 30.0% |
| TGCAAAATGAACTTCAAGAA+TGG | - | chr2_2:10640533-10640552 | Msa0237470:CDS | 30.0% | |
| AGAAGTTGAACGACTTAAAA+AGG | - | chr2_2:10640645-10640664 | Msa0237470:CDS | 30.0% | |
| ! | TTTTCATGGTGTTTTCTTCA+AGG | + | chr2_2:10640681-10640700 | None:intergenic | 30.0% |
| CCATGATTGAAACTTCATTT+GGG | + | chr2_2:10640884-10640903 | None:intergenic | 30.0% | |
| CCAAATGAAGTTTCAATCAT+GGG | - | chr2_2:10640882-10640901 | Msa0237470:CDS | 30.0% | |
| TGAAAACAAATAACAGCATC+AGG | + | chr2_2:10641092-10641111 | None:intergenic | 30.0% | |
| !! | TGCTGTTATTTGTTTTCATG+TGG | - | chr2_2:10641094-10641113 | Msa0237470:intron | 30.0% |
| TACATGTTGGTATTAATACC+TGG | + | chr2_2:10641177-10641196 | None:intergenic | 30.0% | |
| TAAGAGCAGAAAATAAGTGT+GGG | + | chr2_2:10641287-10641306 | None:intergenic | 30.0% | |
| TTAAGAGCAGAAAATAAGTG+TGG | + | chr2_2:10641288-10641307 | None:intergenic | 30.0% | |
| AACATCATTTCCTTGTTGAA+TGG | - | chr2_2:10641380-10641399 | Msa0237470:intron | 30.0% | |
| ACATCATTTCCTTGTTGAAT+GGG | - | chr2_2:10641381-10641400 | Msa0237470:intron | 30.0% | |
| GCTTAATGAGTTTGTGTTAT+TGG | - | chr2_2:10641485-10641504 | Msa0237470:intron | 30.0% | |
| GAAAAATATCACAGGCTAAA+CGG | - | chr2_2:10641527-10641546 | Msa0237470:intron | 30.0% | |
| AAAATTGCTGCACTAAAAAG+AGG | - | chr2_2:10641751-10641770 | Msa0237470:intron | 30.0% | |
| !! | AGTGTTTTGAATAATGTCCT+CGG | - | chr2_2:10642114-10642133 | Msa0237470:five_prime_UTR | 30.0% |
| GATCTGAATGCATTATTCTA+TGG | + | chr2_2:10642145-10642164 | None:intergenic | 30.0% | |
| AGAATAATGCATTCAGATCT+TGG | - | chr2_2:10642146-10642165 | Msa0237470:five_prime_UTR | 30.0% | |
| GTATAGCTGTCTAATGATGA+TGG | + | chr2_2:10638719-10638738 | None:intergenic | 35.0% | |
| TCGGTTTCTGTTCAAGAAAA+AGG | - | chr2_2:10638957-10638976 | Msa0237470:CDS | 35.0% | |
| CAGCAGAGAATTCATAACTT+AGG | + | chr2_2:10639064-10639083 | None:intergenic | 35.0% | |
| ! | TCGAAATTACCCCATGTTTT+GGG | - | chr2_2:10639090-10639109 | Msa0237470:CDS | 35.0% |
| TTAAAATAGTGCTCTCGTGA+AGG | + | chr2_2:10639488-10639507 | None:intergenic | 35.0% | |
| !! | CAAGATGTAATTCTGAAGCT+CGG | + | chr2_2:10639519-10639538 | None:intergenic | 35.0% |
| TTGAAGAACGCAAACCAATT+CGG | + | chr2_2:10639543-10639562 | None:intergenic | 35.0% | |
| !!! | GTTAGGCCATTTTTCAGTTT+CGG | - | chr2_2:10639566-10639585 | Msa0237470:CDS | 35.0% |
| CGCTGCATAAACTACTTAAA+GGG | + | chr2_2:10639658-10639677 | None:intergenic | 35.0% | |
| TCGCTGCATAAACTACTTAA+AGG | + | chr2_2:10639659-10639678 | None:intergenic | 35.0% | |
| TTAAGTAGTTTATGCAGCGA+TGG | - | chr2_2:10639659-10639678 | Msa0237470:CDS | 35.0% | |
| !! | CTTTTGATTGTGATTCAGTC+TGG | + | chr2_2:10639709-10639728 | None:intergenic | 35.0% |
| GGAATTGAATTACAAGGACT+TGG | + | chr2_2:10639761-10639780 | None:intergenic | 35.0% | |
| ! | TTGAGAATTTTCTGCCACAA+CGG | + | chr2_2:10639807-10639826 | None:intergenic | 35.0% |
| GCAGAAAATTCTCAAATTCG+CGG | - | chr2_2:10639812-10639831 | Msa0237470:CDS | 35.0% | |
| ! | GAAAAACAGAGTGCTAATTC+TGG | - | chr2_2:10639845-10639864 | Msa0237470:CDS | 35.0% |
| TCCACGTGGAAAAAAGTTAT+CGG | - | chr2_2:10640002-10640021 | Msa0237470:CDS | 35.0% | |
| TATAAACATAAGCAAGGCAG+TGG | - | chr2_2:10640144-10640163 | Msa0237470:CDS | 35.0% | |
| ATAAACATAAGCAAGGCAGT+GGG | - | chr2_2:10640145-10640164 | Msa0237470:CDS | 35.0% | |
| TAGAATCCAGGCTAAATGTT+GGG | + | chr2_2:10640231-10640250 | None:intergenic | 35.0% | |
| !! | CTTGTTATTACAGCAGATAG+GGG | + | chr2_2:10640401-10640420 | None:intergenic | 35.0% |
| !! | GACTTGTTATTACAGCAGAT+AGG | + | chr2_2:10640403-10640422 | None:intergenic | 35.0% |
| TCACATAGTAGTAGTTGTGT+GGG | - | chr2_2:10640421-10640440 | Msa0237470:CDS | 35.0% | |
| !! | AGATGAGTTGATTCTGAAGA+TGG | - | chr2_2:10640492-10640511 | Msa0237470:CDS | 35.0% |
| !!! | CATCTCAGAAAGCTTTTTCA+TGG | + | chr2_2:10640695-10640714 | None:intergenic | 35.0% |
| ! | CATGAAAAAGCTTTCTGAGA+TGG | - | chr2_2:10640693-10640712 | Msa0237470:CDS | 35.0% |
| ATCAGCAACAAACTTTCAAG+AGG | - | chr2_2:10640837-10640856 | Msa0237470:CDS | 35.0% | |
| CCCAAATGAAGTTTCAATCA+TGG | - | chr2_2:10640881-10640900 | Msa0237470:CDS | 35.0% | |
| CCCATGATTGAAACTTCATT+TGG | + | chr2_2:10640885-10640904 | None:intergenic | 35.0% | |
| GAATCAGAAATCGTTGTTAC+AGG | - | chr2_2:10640906-10640925 | Msa0237470:CDS | 35.0% | |
| ACAGCATCAGGAATAAATGT+TGG | + | chr2_2:10641080-10641099 | None:intergenic | 35.0% | |
| CAAAGCAGTTGGAATAAAAC+AGG | + | chr2_2:10641136-10641155 | None:intergenic | 35.0% | |
| ACAGCTTGAGTAATACATGT+TGG | + | chr2_2:10641190-10641209 | None:intergenic | 35.0% | |
| ATTGAATGTGTTTGCATCTG+TGG | + | chr2_2:10641457-10641476 | None:intergenic | 35.0% | |
| ! | TTTTCGTATAGAACTGACCA+TGG | + | chr2_2:10641587-10641606 | None:intergenic | 35.0% |
| AAGAGAACAAATTGAGGAGT+CGG | - | chr2_2:10641609-10641628 | Msa0237470:intron | 35.0% | |
| !! | TGCAGCAATTTTTGAAGAGT+CGG | + | chr2_2:10641743-10641762 | None:intergenic | 35.0% |
| AATAACTTCTCTATGAACGG+AGG | - | chr2_2:10641874-10641893 | Msa0237470:intron | 35.0% | |
| !! | GTGTTTTGAATAATGTCCTC+GGG | - | chr2_2:10642115-10642134 | Msa0237470:five_prime_UTR | 35.0% |
| TTGTGCTATGTGTTGAGCTT+GGG | + | chr2_2:10637769-10637788 | None:intergenic | 40.0% | |
| TTTGTGCTATGTGTTGAGCT+TGG | + | chr2_2:10637770-10637789 | None:intergenic | 40.0% | |
| TTCTTCAATTGGGGATCTTC+TGG | - | chr2_2:10637968-10637987 | Msa0237470:CDS | 40.0% | |
| TCTTCAATTGGGGATCTTCT+GGG | - | chr2_2:10637969-10637988 | Msa0237470:CDS | 40.0% | |
| !!! | GTACTTGGTTTTGGAATCAG+TGG | - | chr2_2:10638414-10638433 | Msa0237470:intron | 40.0% |
| GAATGCTTGTGAATTGATGC+TGG | - | chr2_2:10638442-10638461 | Msa0237470:intron | 40.0% | |
| ! | GTCGAAATTACCCCATGTTT+TGG | - | chr2_2:10639089-10639108 | Msa0237470:CDS | 40.0% |
| ACCACTTCTAATTCCTCCTT+AGG | + | chr2_2:10639227-10639246 | None:intergenic | 40.0% | |
| CACTGAAGATGTTGCTACAA+AGG | - | chr2_2:10639364-10639383 | Msa0237470:CDS | 40.0% | |
| ACAAAGGCTATGTTAAGACC+CGG | - | chr2_2:10639380-10639399 | Msa0237470:CDS | 40.0% | |
| TTTGCATCCATAACAGATGC+CGG | + | chr2_2:10639402-10639421 | None:intergenic | 40.0% | |
| CGAGCTTCAGAATTACATCT+TGG | - | chr2_2:10639517-10639536 | Msa0237470:CDS | 40.0% | |
| GAATTACATCTTGGCCGAAT+TGG | - | chr2_2:10639526-10639545 | Msa0237470:CDS | 40.0% | |
| !! | ATTGGTTTGCGTTCTTCAAG+AGG | - | chr2_2:10639544-10639563 | Msa0237470:CDS | 40.0% |
| TTTGCGTTCTTCAAGAGGTT+AGG | - | chr2_2:10639549-10639568 | Msa0237470:CDS | 40.0% | |
| GCATCTCCGAAACTGAAAAA+TGG | + | chr2_2:10639575-10639594 | None:intergenic | 40.0% | |
| ATTTCTCAGATTGAGTGCCT+GGG | + | chr2_2:10639784-10639803 | None:intergenic | 40.0% | |
| TCAATCTGAGAAATCCGTTG+TGG | - | chr2_2:10639790-10639809 | Msa0237470:CDS | 40.0% | |
| GAAAATTCTCAAATTCGCGG+TGG | - | chr2_2:10639815-10639834 | Msa0237470:CDS | 40.0% | |
| GACAAGTCATCTAATGCTTC+CGG | - | chr2_2:10639881-10639900 | Msa0237470:CDS | 40.0% | |
| ! | CCACATTTTTCTTGTAGCAG+GGG | + | chr2_2:10639920-10639939 | None:intergenic | 40.0% |
| ! | CCCACATTTTTCTTGTAGCA+GGG | + | chr2_2:10639921-10639940 | None:intergenic | 40.0% |
| CCCTGCTACAAGAAAAATGT+GGG | - | chr2_2:10639918-10639937 | Msa0237470:CDS | 40.0% | |
| ! | TCCCACATTTTTCTTGTAGC+AGG | + | chr2_2:10639922-10639941 | None:intergenic | 40.0% |
| ACGAAAAATGTACTCCCTCT+TGG | + | chr2_2:10639972-10639991 | None:intergenic | 40.0% | |
| !!! | TCCGATAACTTTTTTCCACG+TGG | + | chr2_2:10640006-10640025 | None:intergenic | 40.0% |
| TGGTTTGAGTGGTTTAATCC+TGG | - | chr2_2:10640066-10640085 | Msa0237470:CDS | 40.0% | |
| AGAATCCAGGCTAAATGTTG+GGG | + | chr2_2:10640230-10640249 | None:intergenic | 40.0% | |
| CTAGAATCCAGGCTAAATGT+TGG | + | chr2_2:10640232-10640251 | None:intergenic | 40.0% | |
| ! | TGTAGCTGATAATGCATCTG+GGG | + | chr2_2:10640329-10640348 | None:intergenic | 40.0% |
| ! | CTGTAGCTGATAATGCATCT+GGG | + | chr2_2:10640330-10640349 | None:intergenic | 40.0% |
| ! | TCTGTAGCTGATAATGCATC+TGG | + | chr2_2:10640331-10640350 | None:intergenic | 40.0% |
| GTCACATAGTAGTAGTTGTG+TGG | - | chr2_2:10640420-10640439 | Msa0237470:CDS | 40.0% | |
| CACATAGTAGTAGTTGTGTG+GGG | - | chr2_2:10640422-10640441 | Msa0237470:CDS | 40.0% | |
| TGTCTCATGGACTTGTCATA+TGG | + | chr2_2:10640451-10640470 | None:intergenic | 40.0% | |
| ATGACAAGTCCATGAGACAA+TGG | - | chr2_2:10640452-10640471 | Msa0237470:CDS | 40.0% | |
| AACTTCAAGAATGGACAGAG+TGG | - | chr2_2:10640542-10640561 | Msa0237470:CDS | 40.0% | |
| ACTTCAAGAATGGACAGAGT+GGG | - | chr2_2:10640543-10640562 | Msa0237470:CDS | 40.0% | |
| !! | TTCTGAGATGGAAAATGCCT+TGG | - | chr2_2:10640705-10640724 | Msa0237470:CDS | 40.0% |
| ! | TCTGAGATGGAAAATGCCTT+GGG | - | chr2_2:10640706-10640725 | Msa0237470:CDS | 40.0% |
| AACGAGCTAATACTGCAGTA+CGG | - | chr2_2:10640749-10640768 | Msa0237470:CDS | 40.0% | |
| CAAATTGGCACAGATATCGA+AGG | - | chr2_2:10640951-10640970 | Msa0237470:CDS | 40.0% | |
| ATTCCAAATGCTTTGCCATG+CGG | - | chr2_2:10641031-10641050 | Msa0237470:exon | 40.0% | |
| AAAATGCATGGCAAAGCAGT+TGG | + | chr2_2:10641147-10641166 | None:intergenic | 40.0% | |
| CCTGGTGAAGAAAAAATGCA+TGG | + | chr2_2:10641159-10641178 | None:intergenic | 40.0% | |
| !!! | CCATGCATTTTTTCTTCACC+AGG | - | chr2_2:10641156-10641175 | Msa0237470:intron | 40.0% |
| ! | CAAGCTGTTGTTTGTTCTCA+CGG | - | chr2_2:10641202-10641221 | Msa0237470:intron | 40.0% |
| ! | AAGCTGTTGTTTGTTCTCAC+GGG | - | chr2_2:10641203-10641222 | Msa0237470:intron | 40.0% |
| TCATTTCCTTGTTGAATGGG+TGG | - | chr2_2:10641384-10641403 | Msa0237470:intron | 40.0% | |
| CATTTCCTTGTTGAATGGGT+GGG | - | chr2_2:10641385-10641404 | Msa0237470:intron | 40.0% | |
| TGGGTCTGTTCTCATTGTAA+AGG | - | chr2_2:10641505-10641524 | Msa0237470:intron | 40.0% | |
| AAATATCACAGGCTAAACGG+CGG | - | chr2_2:10641530-10641549 | Msa0237470:intron | 40.0% | |
| AACAGAAGAACTTCTCTCCA+TGG | - | chr2_2:10641567-10641586 | Msa0237470:intron | 40.0% | |
| GCACTAAAAAGAGGAATCGA+TGG | - | chr2_2:10641760-10641779 | Msa0237470:intron | 40.0% | |
| TAGCTTCAAGGACACGAAAA+AGG | - | chr2_2:10641795-10641814 | Msa0237470:intron | 40.0% | |
| AGCTTCAAGGACACGAAAAA+GGG | - | chr2_2:10641796-10641815 | Msa0237470:intron | 40.0% | |
| !! | AACCAGTTCTGAAATAGACG+CGG | + | chr2_2:10641845-10641864 | None:intergenic | 40.0% |
| CAAACAACTTGATGTGCACA+TGG | + | chr2_2:10641964-10641983 | None:intergenic | 40.0% | |
| ATGCATTCAGATCTTGGATC+TGG | - | chr2_2:10642152-10642171 | Msa0237470:five_prime_UTR | 40.0% | |
| TGTGCTATGTGTTGAGCTTG+GGG | + | chr2_2:10637768-10637787 | None:intergenic | 45.0% | |
| ATTTACTAGTGCGTATGCCG+TGG | - | chr2_2:10638513-10638532 | Msa0237470:intron | 45.0% | |
| TTTACTAGTGCGTATGCCGT+GGG | - | chr2_2:10638514-10638533 | Msa0237470:intron | 45.0% | |
| TAATTGATCCGTGCATCCCA+CGG | + | chr2_2:10638533-10638552 | None:intergenic | 45.0% | |
| TTGCAGCTAAATGGCATCAC+TGG | - | chr2_2:10638905-10638924 | Msa0237470:intron | 45.0% | |
| TTACTTGACTCCCCTAAAGG+TGG | + | chr2_2:10639014-10639033 | None:intergenic | 45.0% | |
| CTCTTACTTGACTCCCCTAA+AGG | + | chr2_2:10639017-10639036 | None:intergenic | 45.0% | |
| ! | TGTGACTTGCCCAAAACATG+GGG | + | chr2_2:10639102-10639121 | None:intergenic | 45.0% |
| ! | CTGTGACTTGCCCAAAACAT+GGG | + | chr2_2:10639103-10639122 | None:intergenic | 45.0% |
| TGACCTCAGATGAAACTGCA+GGG | + | chr2_2:10639193-10639212 | None:intergenic | 45.0% | |
| CTTCTAATTCCTCCTTAGGC+TGG | + | chr2_2:10639223-10639242 | None:intergenic | 45.0% | |
| GCCTAAGGAGGAATTAGAAG+TGG | - | chr2_2:10639223-10639242 | Msa0237470:CDS | 45.0% | |
| TTAGAAGTGGTTGAGTCCCA+TGG | - | chr2_2:10639236-10639255 | Msa0237470:CDS | 45.0% | |
| TTAAGACCCGGCATCTGTTA+TGG | - | chr2_2:10639392-10639411 | Msa0237470:CDS | 45.0% | |
| TTGCATCCATAACAGATGCC+GGG | + | chr2_2:10639401-10639420 | None:intergenic | 45.0% | |
| TCAGTTTCGGAGATGCAATG+TGG | - | chr2_2:10639579-10639598 | Msa0237470:CDS | 45.0% | |
| TCACATGCTTGTGCAATGGA+TGG | - | chr2_2:10639629-10639648 | Msa0237470:CDS | 45.0% | |
| AGTTTATGCAGCGATGGCAT+TGG | - | chr2_2:10639665-10639684 | Msa0237470:CDS | 45.0% | |
| CCTGGGGGAATTGAATTACA+AGG | + | chr2_2:10639767-10639786 | None:intergenic | 45.0% | |
| CCTTGTAATTCAATTCCCCC+AGG | - | chr2_2:10639764-10639783 | Msa0237470:CDS | 45.0% | |
| TTTCTCAGATTGAGTGCCTG+GGG | + | chr2_2:10639783-10639802 | None:intergenic | 45.0% | |
| GATTTCTCAGATTGAGTGCC+TGG | + | chr2_2:10639785-10639804 | None:intergenic | 45.0% | |
| CCCCTGCTACAAGAAAAATG+TGG | - | chr2_2:10639917-10639936 | Msa0237470:CDS | 45.0% | |
| TATCGGACATACGGGTCTAA+AGG | - | chr2_2:10640019-10640038 | Msa0237470:CDS | 45.0% | |
| ATCGGACATACGGGTCTAAA+GGG | - | chr2_2:10640020-10640039 | Msa0237470:CDS | 45.0% | |
| TCTAAAGGGTCTTCAAGAGG+AGG | - | chr2_2:10640034-10640053 | Msa0237470:CDS | 45.0% | |
| AGGCTAAATGTTGGGGTAGA+TGG | + | chr2_2:10640223-10640242 | None:intergenic | 45.0% | |
| ATCTACCCCAACATTTAGCC+TGG | - | chr2_2:10640222-10640241 | Msa0237470:CDS | 45.0% | |
| ! | GTAGCTGATAATGCATCTGG+GGG | + | chr2_2:10640328-10640347 | None:intergenic | 45.0% |
| ! | TGATTCTGAAGATGGTTCCG+AGG | - | chr2_2:10640500-10640519 | Msa0237470:CDS | 45.0% |
| ! | GATTCTGAAGATGGTTCCGA+GGG | - | chr2_2:10640501-10640520 | Msa0237470:CDS | 45.0% |
| GACAGAGTGGGCAAATCAAA+AGG | - | chr2_2:10640555-10640574 | Msa0237470:CDS | 45.0% | |
| GGCAAATCAAAAGGTGATGC+AGG | - | chr2_2:10640564-10640583 | Msa0237470:CDS | 45.0% | |
| AGGCTGAGCTTAAGACACTA+AGG | - | chr2_2:10640611-10640630 | Msa0237470:CDS | 45.0% | |
| GAAAATGCCTTGGGTAAAGC+AGG | - | chr2_2:10640715-10640734 | Msa0237470:CDS | 45.0% | |
| AGATGGAGAATGCTGCATTG+AGG | - | chr2_2:10640779-10640798 | Msa0237470:CDS | 45.0% | |
| TGCTGCATTGAGGAAAGAGA+TGG | - | chr2_2:10640789-10640808 | Msa0237470:CDS | 45.0% | |
| TGCATTGAGGAAAGAGATGG+AGG | - | chr2_2:10640792-10640811 | Msa0237470:CDS | 45.0% | |
| ! | AGCTGTTGTTTGTTCTCACG+GGG | - | chr2_2:10641204-10641223 | Msa0237470:intron | 45.0% |
| ! | ATACGTGTCACTGCATGTGT+CGG | + | chr2_2:10641331-10641350 | None:intergenic | 45.0% |
| CATTACCCACCCATTCAACA+AGG | + | chr2_2:10641393-10641412 | None:intergenic | 45.0% | |
| CAATTTGATCCTCTCCTCCT+TGG | + | chr2_2:10641641-10641660 | None:intergenic | 45.0% | |
| CAAGGAGGAGAGGATCAAAT+TGG | - | chr2_2:10641639-10641658 | Msa0237470:intron | 45.0% | |
| GGAGAGGATCAAATTGGAAG+CGG | - | chr2_2:10641645-10641664 | Msa0237470:intron | 45.0% | |
| GATCAAATTGGAAGCGGAGA+AGG | - | chr2_2:10641651-10641670 | Msa0237470:intron | 45.0% | |
| TTTCGTGTCCTTGAAGCTAC+CGG | + | chr2_2:10641794-10641813 | None:intergenic | 45.0% | |
| AAGGACACGAAAAAGGGTTC+TGG | - | chr2_2:10641802-10641821 | Msa0237470:intron | 45.0% | |
| !! | TTCTGAAATAGACGCGGTGT+GGG | + | chr2_2:10641839-10641858 | None:intergenic | 45.0% |
| AACTTCTCTATGAACGGAGG+AGG | - | chr2_2:10641877-10641896 | Msa0237470:intron | 45.0% | |
| CAACAGACATCTCTTCCGAA+AGG | + | chr2_2:10641933-10641952 | None:intergenic | 45.0% | |
| AATGAGCTCCATGAGAAGCA+GGG | - | chr2_2:10641994-10642013 | Msa0237470:intron | 45.0% | |
| TGCAAGATTGTCCTTCTTGC+AGG | - | chr2_2:10642019-10642038 | Msa0237470:intron | 45.0% | |
| ACAGAAATTCGCTCCTGGAT+GGG | + | chr2_2:10642048-10642067 | None:intergenic | 45.0% | |
| ATTATTCTATGGGAGTCCCG+AGG | + | chr2_2:10642134-10642153 | None:intergenic | 45.0% | |
| ! | ATGGCATCACTGGTTGTCAG+TGG | - | chr2_2:10638915-10638934 | Msa0237470:intron | 50.0% |
| TTCAGGGCTGATCCACCTTT+AGG | - | chr2_2:10638999-10639018 | Msa0237470:CDS | 50.0% | |
| TCAGGGCTGATCCACCTTTA+GGG | - | chr2_2:10639000-10639019 | Msa0237470:CDS | 50.0% | |
| ! | GCTGTGACTTGCCCAAAACA+TGG | + | chr2_2:10639104-10639123 | None:intergenic | 50.0% |
| GACTTGTGCACTGTTAGCCA+CGG | - | chr2_2:10639128-10639147 | Msa0237470:CDS | 50.0% | |
| GTTAGCCACGGTTGTTCTGA+TGG | - | chr2_2:10639140-10639159 | Msa0237470:CDS | 50.0% | |
| TCAAGCCATCAGAACAACCG+TGG | + | chr2_2:10639148-10639167 | None:intergenic | 50.0% | |
| CTGCAGGGCTAGATAATCCA+AGG | + | chr2_2:10639178-10639197 | None:intergenic | 50.0% | |
| TAGCCCTGCAGTTTCATCTG+AGG | - | chr2_2:10639187-10639206 | Msa0237470:CDS | 50.0% | |
| CTGACCTCAGATGAAACTGC+AGG | + | chr2_2:10639194-10639213 | None:intergenic | 50.0% | |
| ! | CTGCAGTTTCATCTGAGGTC+AGG | - | chr2_2:10639192-10639211 | Msa0237470:CDS | 50.0% |
| ATCACTCCAATCAGCGCCAT+GGG | + | chr2_2:10639255-10639274 | None:intergenic | 50.0% | |
| CGTGTCACATGCTTGTGCAA+TGG | - | chr2_2:10639625-10639644 | Msa0237470:CDS | 50.0% | |
| TTCTCAGATTGAGTGCCTGG+GGG | + | chr2_2:10639782-10639801 | None:intergenic | 50.0% | |
| ! | TCAAATTCGCGGTGGACTCT+TGG | - | chr2_2:10639823-10639842 | Msa0237470:CDS | 50.0% |
| TTGTAGCAGGGGAGATTGAG+AGG | + | chr2_2:10639909-10639928 | None:intergenic | 50.0% | |
| TCCATTCGAGTAGCACCAAG+AGG | - | chr2_2:10639954-10639973 | Msa0237470:CDS | 50.0% | |
| CCATTCGAGTAGCACCAAGA+GGG | - | chr2_2:10639955-10639974 | Msa0237470:CDS | 50.0% | |
| TCGTCAGAAGTCAATCCACG+TGG | - | chr2_2:10639988-10640007 | Msa0237470:CDS | 50.0% | |
| GGGTCTAAAGGGTCTTCAAG+AGG | - | chr2_2:10640031-10640050 | Msa0237470:CDS | 50.0% | |
| TCAAGAGGAGGAAAGCTGAG+TGG | - | chr2_2:10640046-10640065 | Msa0237470:CDS | 50.0% | |
| GGAAAGCTGAGTGGTTTGAG+TGG | - | chr2_2:10640055-10640074 | Msa0237470:CDS | 50.0% | |
| ! | GGACTACTGACTGCTGGTAT+AGG | + | chr2_2:10640307-10640326 | None:intergenic | 50.0% |
| TTGGGGCAACCATTGTCTCA+TGG | + | chr2_2:10640464-10640483 | None:intergenic | 50.0% | |
| TGAAGATGGTTCCGAGGGTT+CGG | - | chr2_2:10640506-10640525 | Msa0237470:CDS | 50.0% | |
| ! | TCGTCGACTGAGTAAGGACA+AGG | - | chr2_2:10640591-10640610 | Msa0237470:CDS | 50.0% |
| AATGCCTTGGGTAAAGCAGG+TGG | - | chr2_2:10640718-10640737 | Msa0237470:CDS | 50.0% | |
| TTGTCCACCTGCTTTACCCA+AGG | + | chr2_2:10640725-10640744 | None:intergenic | 50.0% | |
| AAAGCAAGCCGAAGTGCAAG+CGG | - | chr2_2:10640978-10640997 | Msa0237470:CDS | 50.0% | |
| GAATTGCTCCGCTTGCACTT+CGG | + | chr2_2:10640989-10641008 | None:intergenic | 50.0% | |
| ! | GAACCGCATGGCAAAGCATT+TGG | + | chr2_2:10641037-10641056 | None:intergenic | 50.0% |
| TCTGGTGAAGATGAACCGCA+TGG | + | chr2_2:10641049-10641068 | None:intergenic | 50.0% | |
| ! | GCTGTTGTTTGTTCTCACGG+GGG | - | chr2_2:10641205-10641224 | Msa0237470:intron | 50.0% |
| ! | CTGTTGTTTGTTCTCACGGG+GGG | - | chr2_2:10641206-10641225 | Msa0237470:intron | 50.0% |
| ! | TGTTGTTTGTTCTCACGGGG+GGG | - | chr2_2:10641207-10641226 | Msa0237470:intron | 50.0% |
| GGAATCGATGGAAGCTATGC+CGG | - | chr2_2:10641772-10641791 | Msa0237470:intron | 50.0% | |
| AAGCTATGCCGGTAGCTTCA+AGG | - | chr2_2:10641783-10641802 | Msa0237470:intron | 50.0% | |
| ! | TCTGAAATAGACGCGGTGTG+GGG | + | chr2_2:10641838-10641857 | None:intergenic | 50.0% |
| !! | GTTCTGAAATAGACGCGGTG+TGG | + | chr2_2:10641840-10641859 | None:intergenic | 50.0% |
| CACCGCGTCTATTTCAGAAC+TGG | - | chr2_2:10641840-10641859 | Msa0237470:intron | 50.0% | |
| ! | TGAACGGAGGAGGTGTGAAA+CGG | - | chr2_2:10641887-10641906 | Msa0237470:intron | 50.0% |
| ! | AGGAGGTGTGAAACGGGAAA+GGG | - | chr2_2:10641894-10641913 | Msa0237470:intron | 50.0% |
| CAATGAGCTCCATGAGAAGC+AGG | - | chr2_2:10641993-10642012 | Msa0237470:intron | 50.0% | |
| CTTGCATTCCCTGCTTCTCA+TGG | + | chr2_2:10642005-10642024 | None:intergenic | 50.0% | |
| CAGAAATTCGCTCCTGGATG+GGG | + | chr2_2:10642047-10642066 | None:intergenic | 50.0% | |
| CACAGAAATTCGCTCCTGGA+TGG | + | chr2_2:10642049-10642068 | None:intergenic | 50.0% | |
| AACGCACAGAAATTCGCTCC+TGG | + | chr2_2:10642053-10642072 | None:intergenic | 50.0% | |
| GCTATGTGTTGAGCTTGGGG+AGG | + | chr2_2:10637765-10637784 | None:intergenic | 55.0% | |
| CAGGGCTGATCCACCTTTAG+GGG | - | chr2_2:10639001-10639020 | Msa0237470:CDS | 55.0% | |
| GATGGCTTGAAGCTCGACCT+TGG | - | chr2_2:10639158-10639177 | Msa0237470:CDS | 55.0% | |
| !! | TTGAGTCCCATGGCGCTGAT+TGG | - | chr2_2:10639246-10639265 | Msa0237470:CDS | 55.0% |
| GATCACTCCAATCAGCGCCA+TGG | + | chr2_2:10639256-10639275 | None:intergenic | 55.0% | |
| !! | TGCAGCGATGGCATTGGTGA+TGG | - | chr2_2:10639671-10639690 | Msa0237470:CDS | 55.0% |
| CAGGGGAGATTGAGAGGTTC+CGG | + | chr2_2:10639903-10639922 | None:intergenic | 55.0% | |
| !! | CCCTCTTGGTGCTACTCGAA+TGG | + | chr2_2:10639958-10639977 | None:intergenic | 55.0% |
| GAAGATGGTTCCGAGGGTTC+GGG | - | chr2_2:10640507-10640526 | Msa0237470:CDS | 55.0% | |
| ! | TTTTGCAGCTCCCGAACCCT+CGG | + | chr2_2:10640520-10640539 | None:intergenic | 55.0% |
| GGGTAAAGCAGGTGGACAAG+TGG | - | chr2_2:10640726-10640745 | Msa0237470:CDS | 55.0% | |
| TGCAGTACGGAAGCTCGAGA+TGG | - | chr2_2:10640762-10640781 | Msa0237470:CDS | 55.0% | |
| GGAGGCTGCTAAGTTACGTG+CGG | - | chr2_2:10640810-10640829 | Msa0237470:CDS | 55.0% | |
| AGTGCAAGCGGAGCAATTCG+AGG | - | chr2_2:10640990-10641009 | Msa0237470:CDS | 55.0% | |
| TGAGGAGTCGGCTAGAACCA+AGG | - | chr2_2:10641621-10641640 | Msa0237470:intron | 55.0% | |
| ! | GAACGGAGGAGGTGTGAAAC+GGG | - | chr2_2:10641888-10641907 | Msa0237470:intron | 55.0% |
| ! | GAGGAGGTGTGAAACGGGAA+AGG | - | chr2_2:10641893-10641912 | Msa0237470:intron | 55.0% |
| GGAGTGCGTGATGTGCCTTT+CGG | - | chr2_2:10641915-10641934 | Msa0237470:intron | 55.0% | |
| TGCGTATGCCGTGGGATGCA+CGG | - | chr2_2:10638522-10638541 | Msa0237470:intron | 60.0% | |
| GGTCAGGCTTAGCCAGCCTA+AGG | - | chr2_2:10639208-10639227 | Msa0237470:CDS | 60.0% | |
| CAGGCTTAGCCAGCCTAAGG+AGG | - | chr2_2:10639211-10639230 | Msa0237470:CDS | 60.0% | |
| ! | TCTGGGGGACTACTGACTGC+TGG | + | chr2_2:10640313-10640332 | None:intergenic | 60.0% |
| ! | GGCTGCTCGTCGACTGAGTA+AGG | - | chr2_2:10640585-10640604 | Msa0237470:CDS | 60.0% |
| ATCACAGGCTAAACGGCGGC+AGG | - | chr2_2:10641534-10641553 | Msa0237470:intron | 60.0% | |
| GGAGTCGGCTAGAACCAAGG+AGG | - | chr2_2:10641624-10641643 | Msa0237470:intron | 60.0% | |
| CGGCTAGAACCAAGGAGGAG+AGG | - | chr2_2:10641629-10641648 | Msa0237470:intron | 60.0% | |
| TGGATGGGGCTCCTGCAAGA+AGG | + | chr2_2:10642033-10642052 | None:intergenic | 60.0% | |
| TTCTTGCAGGAGCCCCATCC+AGG | - | chr2_2:10642032-10642051 | Msa0237470:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 10637736 | 10642228 | 10637736 | ID=Msa0237470;Name=Msa0237470 |
| chr2_2 | mRNA | 10637736 | 10642228 | 10637736 | ID=Msa0237470-mRNA-1;Parent=Msa0237470;Name=Msa0237470-mRNA-1;_AED=0.07;_eAED=0.07;_QI=230|1|1|1|0.33|0.25|4|142|880 |
| chr2_2 | exon | 10637736 | 10638423 | 10637736 | ID=Msa0237470-mRNA-1:exon:4667;Parent=Msa0237470-mRNA-1 |
| chr2_2 | exon | 10638953 | 10641053 | 10638953 | ID=Msa0237470-mRNA-1:exon:4666;Parent=Msa0237470-mRNA-1 |
| chr2_2 | exon | 10641724 | 10641762 | 10641724 | ID=Msa0237470-mRNA-1:exon:4665;Parent=Msa0237470-mRNA-1 |
| chr2_2 | exon | 10642042 | 10642228 | 10642042 | ID=Msa0237470-mRNA-1:exon:4664;Parent=Msa0237470-mRNA-1 |
| chr2_2 | five_prime_UTR | 10642042 | 10642228 | 10642042 | ID=Msa0237470-mRNA-1:five_prime_utr;Parent=Msa0237470-mRNA-1 |
| chr2_2 | five_prime_UTR | 10641724 | 10641762 | 10641724 | ID=Msa0237470-mRNA-1:five_prime_utr;Parent=Msa0237470-mRNA-1 |
| chr2_2 | five_prime_UTR | 10641050 | 10641053 | 10641050 | ID=Msa0237470-mRNA-1:five_prime_utr;Parent=Msa0237470-mRNA-1 |
| chr2_2 | CDS | 10638953 | 10641049 | 10638953 | ID=Msa0237470-mRNA-1:cds;Parent=Msa0237470-mRNA-1 |
| chr2_2 | CDS | 10637878 | 10638423 | 10637878 | ID=Msa0237470-mRNA-1:cds;Parent=Msa0237470-mRNA-1 |
| chr2_2 | three_prime_UTR | 10637736 | 10637877 | 10637736 | ID=Msa0237470-mRNA-1:three_prime_utr;Parent=Msa0237470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
