AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0129550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0129550 MtrunA17_Chr1g0196491 98.588 708 10 0 2 709 1771 2478 0.0 1457
Msa0129550 MtrunA17_Chr7g0273231 70.028 704 206 4 7 709 1763 2462 0.0 1041
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0129550 AT2G48060.3 73.840 711 184 2 1 709 1660 2370 0.0 1122
Msa0129550 AT2G48060.2 73.840 711 184 2 1 709 1772 2482 0.0 1121
Msa0129550 AT2G48060.1 73.840 711 184 2 1 709 1749 2459 0.0 1121

Find 541 sgRNAs with CRISPR-Local

Find 1625 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGATGTTTCTCTCATTT+TGG 0.057286 1_3:-59535321 Msa0129550:five_prime_UTR
CTCTCTATTTGTATGCTTTA+TGG 0.088941 1_3:-59532586 Msa0129550:five_prime_UTR
GGACCTTTCTTGATTATTTA+AGG 0.112702 1_3:-59533897 Msa0129550:five_prime_UTR
TAACACACAGATCATAATTT+TGG 0.125944 1_3:+59525390 None:intergenic
CTAGCAAAAGAGCAAATATT+TGG 0.145644 1_3:+59532003 None:intergenic
TACCGTATTCTTTCTGTAAT+TGG 0.147413 1_3:-59531781 Msa0129550:CDS
TCCTATTGTAATTTATTTCT+TGG 0.149538 1_3:-59544822 Msa0129550:five_prime_UTR
TTGTATTAATTTGTGTTATA+TGG 0.155358 1_3:-59527960 Msa0129550:CDS
GTTGCTTTACTTGATATATA+TGG 0.171026 1_3:-59544776 Msa0129550:five_prime_UTR
CCTTGTTTGCCCTTTCCTTT+TGG 0.171982 1_3:-59539386 Msa0129550:five_prime_UTR
TGATGGATTAATATCTTTAA+AGG 0.181105 1_3:+59526470 None:intergenic
AGAAAGACTGGAACAAATTT+TGG 0.187206 1_3:+59541117 None:intergenic
AGTATTCATTCGGGTTTATC+TGG 0.192670 1_3:-59534953 Msa0129550:five_prime_UTR
CAGGCCCAAGTTACATCTTC+TGG 0.206780 1_3:-59532556 Msa0129550:five_prime_UTR
ATATCAATTGTTGAACATTT+AGG 0.208793 1_3:-59544704 Msa0129550:intron
TTTGGTTTCTTGTATCTTCT+TGG 0.210352 1_3:-59535485 Msa0129550:five_prime_UTR
TTCTAGTGATTCAGAGAAAA+AGG 0.215380 1_3:-59533008 Msa0129550:five_prime_UTR
GTATATTCTTCAAATTAATT+TGG 0.220183 1_3:-59537356 Msa0129550:five_prime_UTR
GGGATTCCAATGTCATTATT+TGG 0.220456 1_3:+59533214 None:intergenic
AAAACCTGGTCTTCTTTATC+AGG 0.223424 1_3:+59533193 None:intergenic
GGTTTCTATAAATATGATTA+TGG 0.225177 1_3:-59533598 Msa0129550:five_prime_UTR
TTTGAGTACTCCTCTGTTAA+TGG 0.225288 1_3:+59533085 None:intergenic
AAGTGACTTATCTGGTACTA+TGG 0.234440 1_3:-59545013 Msa0129550:five_prime_UTR
TCTCTATTTGTATGCTTTAT+GGG 0.234889 1_3:-59532585 Msa0129550:five_prime_UTR
AGATGTTGAAATAAATTAAA+AGG 0.236865 1_3:+59547346 None:intergenic
TTCTCTGAATCACTAGAAAA+AGG 0.238965 1_3:+59533013 None:intergenic
CCTAGCCTGTTGAGAGAATT+AGG 0.240967 1_3:-59532446 Msa0129550:five_prime_UTR
GAGATGGGTGTTATTATTTC+CGG 0.241067 1_3:-59540803 Msa0129550:five_prime_UTR
GCTGAAGAACAATCAGTTAA+AGG 0.243358 1_3:+59531898 None:intergenic
GTGTATACAGCCCAGGATTT+TGG 0.245324 1_3:-59535292 Msa0129550:five_prime_UTR
TTATCAAGCGATTGCTTATC+TGG 0.245555 1_3:-59535568 Msa0129550:five_prime_UTR
CGATTGCTTGATTACAACTA+TGG 0.249400 1_3:+59525502 None:intergenic
CTGAAAGCTAGCATCTTTAA+TGG 0.250758 1_3:+59527090 None:intergenic
AGACATCCATTCACCATCTT+TGG 0.252272 1_3:+59532328 None:intergenic
TTCACAACTTCTTTCCCTTT+TGG 0.252296 1_3:+59526794 None:intergenic
ACGGCTCGATGAACAGCTTT+AGG 0.256226 1_3:-59526709 Msa0129550:CDS
TGCTATGGAGCTGTATTTGC+AGG 0.258168 1_3:+59533317 None:intergenic
CTTCTCCTTCTGTGGATTAT+AGG 0.263047 1_3:-59535887 Msa0129550:five_prime_UTR
GAAGGATCTTTCGTTATATA+TGG 0.263740 1_3:-59532706 Msa0129550:five_prime_UTR
CAAAATCTACTTAAATTTGA+TGG 0.266938 1_3:+59526453 None:intergenic
CGGCTAGTTGCGGTAGTTTC+CGG 0.267244 1_3:-59547212 Msa0129550:five_prime_UTR
GAAATCTCTGCATATGTATT+TGG 0.267497 1_3:-59532786 Msa0129550:five_prime_UTR
TAACCAAATGATGTGTAATT+AGG 0.278073 1_3:+59535917 None:intergenic
AAAATAAAGACATATTCTTT+TGG 0.279084 1_3:+59531616 None:intergenic
TTCGCAAGCTTATGTGCATT+TGG 0.281861 1_3:-59539354 Msa0129550:five_prime_UTR
TCTCATACTTTACTATATAA+TGG 0.283306 1_3:-59541095 Msa0129550:intron
TACTTTCGTGTCACTGGTTC+AGG 0.284190 1_3:-59526665 Msa0129550:CDS
CTTCCCTCGTTGCTTCTAAC+AGG 0.287409 1_3:-59547049 Msa0129550:intron
CAGTCGGTGCAGACGAAATA+AGG 0.291077 1_3:+59539290 None:intergenic
ACTACAGAAAAGATAATAAT+TGG 0.291679 1_3:+59545050 None:intergenic
TGAAAGCTAGCATCTTTAAT+GGG 0.295745 1_3:+59527091 None:intergenic
TTCACCATCTTTGGGCGTTA+TGG 0.298430 1_3:+59532337 None:intergenic
AATGACTATTCCTCAGTAAA+AGG 0.299773 1_3:-59538934 Msa0129550:intron
ATTGCTTCAGAGGGTATTCT+TGG 0.300315 1_3:-59526288 Msa0129550:intron
CACCAATTTGCTCTGCTTCC+AGG 0.300850 1_3:+59533467 None:intergenic
AGTGATGAAACTTTCTCTTA+TGG 0.302119 1_3:-59536840 Msa0129550:intron
CTTCTGGTCATAAATGTTAC+TGG 0.302320 1_3:-59525795 Msa0129550:three_prime_UTR
AAAATTTCTCAAAGTTTGTT+TGG 0.308449 1_3:+59547420 None:intergenic
GAGTTGAAGAGGTCCTTTAC+TGG 0.313817 1_3:-59525900 Msa0129550:CDS
CTTCCTAACTGCAGACTTGC+AGG 0.315732 1_3:+59532725 None:intergenic
ATCACGAAGAAAGCACTTTC+CGG 0.319302 1_3:+59547169 None:intergenic
AAATCTGCTGTACAATTAAT+AGG 0.319953 1_3:-59532950 Msa0129550:five_prime_UTR
ATGGAAATTGTAATGCAATT+AGG 0.320429 1_3:-59537298 Msa0129550:intron
ATAGACACTTGAACAAAATA+AGG 0.332793 1_3:+59532132 None:intergenic
TTTATCAGGACATGAAAATC+TGG 0.333768 1_3:-59539098 Msa0129550:intron
AATTCCATCTTTGAGATGAT+TGG 0.337033 1_3:-59533619 Msa0129550:five_prime_UTR
TCTTTAACAAGCAACTTTCT+TGG 0.338367 1_3:-59541401 Msa0129550:five_prime_UTR
AGCAGTTTCTCTAGGATTGC+AGG 0.339405 1_3:-59529936 Msa0129550:CDS
GTTTCCCAGGTGCAGTCTAT+TGG 0.340430 1_3:-59532920 Msa0129550:five_prime_UTR
AAGCCTAATTACACATCATT+TGG 0.341849 1_3:-59535920 Msa0129550:five_prime_UTR
TGTATTAATTTGTGTTATAT+GGG 0.342850 1_3:-59527959 Msa0129550:CDS
TGTGCGTGAGCAAGAGAAAA+AGG 0.342864 1_3:-59533440 Msa0129550:five_prime_UTR
GGCAAATTGTACGCAAAATC+TGG 0.343254 1_3:-59534692 Msa0129550:five_prime_UTR
GAAAGATTTGGATGGGATAC+TGG 0.343371 1_3:+59535430 None:intergenic
GCCAGCATTTCTCACAATAA+TGG 0.347036 1_3:+59534532 None:intergenic
TTGCAGCTTCTTTAATCAAC+TGG 0.347419 1_3:-59546458 Msa0129550:intron
TTCAGGTGACGTTAGGCCTT+TGG 0.348498 1_3:-59526648 Msa0129550:CDS
CTACCGACTTCAAATTTAAG+AGG 0.349995 1_3:-59532304 Msa0129550:five_prime_UTR
AAAATAGAGATCTATCATTC+TGG 0.354201 1_3:+59535745 None:intergenic
TCTTGTCTTCATTCTCTTGT+GGG 0.355420 1_3:-59539256 Msa0129550:five_prime_UTR
AGCGTAGGAACACATTTGTT+TGG 0.357127 1_3:-59533951 Msa0129550:five_prime_UTR
CGATACAATGTGCTCTTGTT+AGG 0.357718 1_3:+59529890 None:intergenic
ATACATGGAAAGATTCATAT+TGG 0.361856 1_3:-59544736 Msa0129550:five_prime_UTR
TGTGTATACTAAGAAAGATT+TGG 0.363141 1_3:+59535418 None:intergenic
AACTGCTTTAGCAAGAAATA+TGG 0.366971 1_3:+59529952 None:intergenic
GAGAATATATTTAATCTGTT+TGG 0.367654 1_3:-59534819 Msa0129550:five_prime_UTR
CTTTAACAAGCAACTTTCTT+GGG 0.368387 1_3:-59541400 Msa0129550:five_prime_UTR
GCAAATCCCGTTGCAGCATT+TGG 0.368868 1_3:+59527990 None:intergenic
GGTTGGATTGCTGACTTAAT+TGG 0.369338 1_3:-59541172 Msa0129550:five_prime_UTR
TACATGGAAAGATTCATATT+GGG 0.369360 1_3:-59544735 Msa0129550:five_prime_UTR
AAGCTGATGCTAGTACATTA+TGG 0.371848 1_3:-59526913 Msa0129550:CDS
AGATGGGTGTTATTATTTCC+GGG 0.373074 1_3:-59540802 Msa0129550:five_prime_UTR
TTGGAATTAGCCATCCTTCA+TGG 0.374032 1_3:-59541472 Msa0129550:five_prime_UTR
AGGGGTTGAGTACCATCTTC+TGG 0.374200 1_3:-59525811 Msa0129550:three_prime_UTR
TAAGAGAAAATCACACTTCC+TGG 0.374489 1_3:+59525457 None:intergenic
TACCAGCTTTGCAACATGTT+TGG 0.376926 1_3:-59525676 Msa0129550:three_prime_UTR
TGATAAAGAAGACCAGGTTT+TGG 0.377749 1_3:-59533191 Msa0129550:five_prime_UTR
TCGCAAGCTTATGTGCATTT+GGG 0.378161 1_3:-59539353 Msa0129550:five_prime_UTR
TGTCTATGGATGTCGACTTC+TGG 0.380673 1_3:-59532116 Msa0129550:CDS
ACATCCACTAATGGCATTGA+TGG 0.381706 1_3:-59533289 Msa0129550:five_prime_UTR
ATGGGGTTTGCAATGTTTGT+TGG 0.382653 1_3:+59527109 None:intergenic
TAGCTTGCTCACCCCACATC+TGG 0.385056 1_3:+59535366 None:intergenic
ACACGAATCATCTGCTTGTA+TGG 0.389085 1_3:-59533119 Msa0129550:five_prime_UTR
TCCATTATTGTGAGAAATGC+TGG 0.390054 1_3:-59534533 Msa0129550:five_prime_UTR
TTCTTTCACACAGAGTAGTT+TGG 0.390110 1_3:+59527029 None:intergenic
TCTTGTGCTCATATTAATAC+TGG 0.390764 1_3:-59533848 Msa0129550:five_prime_UTR
AACAGCGGAAAGTATTCATT+CGG 0.390772 1_3:-59534963 Msa0129550:five_prime_UTR
GACTCCAGTGCTCTGACTTA+AGG 0.391376 1_3:-59526194 Msa0129550:CDS
GAAATTGCATATACTTTCAA+TGG 0.391403 1_3:+59535824 None:intergenic
TTGCTTTACTTGATATATAT+GGG 0.392892 1_3:-59544775 Msa0129550:five_prime_UTR
TGGGGTTTGCAATGTTTGTT+GGG 0.393076 1_3:+59527110 None:intergenic
ACACCCGGCAGCTGCATTAC+AGG 0.393407 1_3:-59535069 Msa0129550:five_prime_UTR
CTGCTTGTATTCTTCTGAAT+CGG 0.393890 1_3:-59534713 Msa0129550:five_prime_UTR
GACATCCATTCACCATCTTT+GGG 0.395772 1_3:+59532329 None:intergenic
GTTGACTAACATGGTGAAAC+TGG 0.396557 1_3:-59532211 Msa0129550:CDS
ACTCTCTCAAGTGACTTATC+TGG 0.398419 1_3:-59545021 Msa0129550:five_prime_UTR
GTCTTTCATTAAATCTGATC+TGG 0.399266 1_3:-59540828 Msa0129550:five_prime_UTR
GCAGAACAGACAGGTTTACT+TGG 0.400524 1_3:-59535618 Msa0129550:five_prime_UTR
TATGCTTTATGGGTTAATAC+AGG 0.401222 1_3:-59532575 Msa0129550:five_prime_UTR
CAAACGTATCATCTAGATTC+AGG 0.402701 1_3:-59547464 Msa0129550:five_prime_UTR
AAACGCCACATTAAATATAT+AGG 0.403398 1_3:+59539224 None:intergenic
CTACTTTGTGGTATTCATGC+TGG 0.403463 1_3:-59534046 Msa0129550:five_prime_UTR
TAGCAAAAGAGCAAATATTT+GGG 0.404077 1_3:+59532004 None:intergenic
AAGCAACAAACAAGATCTTC+TGG 0.405133 1_3:+59535540 None:intergenic
CCAAACCTGATTAAAACGTT+AGG 0.405144 1_3:-59525831 Msa0129550:exon
CACAGTGCTGGATGATGATT+TGG 0.406253 1_3:+59532483 None:intergenic
TTGTACAATGTATCACAATT+CGG 0.409512 1_3:-59546393 Msa0129550:intron
ATTCAGTTACAGAGTATGAT+TGG 0.410016 1_3:-59530021 Msa0129550:CDS
TAATTTGGTTTCTTCTGCAT+TGG 0.411581 1_3:-59537341 Msa0129550:five_prime_UTR
GTTTGCTTCCATTCTCATCC+TGG 0.412118 1_3:-59534652 Msa0129550:five_prime_UTR
AAATCCATCAATGCCATTAG+TGG 0.413420 1_3:+59533285 None:intergenic
CCCAGGCGCTATCTTCTTCA+AGG 0.417419 1_3:+59537048 None:intergenic
CAAACCTGATTAAAACGTTA+GGG 0.417803 1_3:-59525830 Msa0129550:exon
CTAAATCCAATAGGAGGACT+AGG 0.419140 1_3:+59536930 None:intergenic
GAGCAAGCTAAAATGTTTCC+CGG 0.420075 1_3:-59535353 Msa0129550:five_prime_UTR
CTGATTGTTCTTCAGCAGAA+TGG 0.421568 1_3:-59531891 Msa0129550:CDS
TTATCCCCGATCAGTGCATT+TGG 0.421854 1_3:-59535503 Msa0129550:five_prime_UTR
CAGGCTGTACAAATCCGATA+TGG 0.422725 1_3:-59529917 Msa0129550:CDS
CTGAGCTTTGAGGATTTCCT+TGG 0.423829 1_3:+59531837 None:intergenic
GCATCATACCTCAGTGCAAT+CGG 0.425333 1_3:-59536022 Msa0129550:five_prime_UTR
GATTCTAGACCCCAAAATCC+TGG 0.426896 1_3:+59535281 None:intergenic
CAGTTGGAACCAGGGCCACT+TGG 0.427853 1_3:-59535593 Msa0129550:five_prime_UTR
CGTATTCTTTCTGTAATTGG+TGG 0.427970 1_3:-59531778 Msa0129550:CDS
TTCTTGTCTTCATTCTCTTG+TGG 0.428572 1_3:-59539257 Msa0129550:five_prime_UTR
ATAACCTTTGTTCTAGCTGT+TGG 0.429148 1_3:-59526228 Msa0129550:CDS
GGTGCAGTCTATTGGAAATC+AGG 0.429274 1_3:-59532912 Msa0129550:five_prime_UTR
CCAAGATACTTTCGTGTCAC+TGG 0.430082 1_3:-59526671 Msa0129550:CDS
GTAACATACTACATCATTGT+TGG 0.432130 1_3:+59532670 None:intergenic
GGGGTCTAGAATCGGGATTG+AGG 0.433103 1_3:-59535271 Msa0129550:five_prime_UTR
AATTACGATGCGTACTTGAC+TGG 0.436152 1_3:-59529790 Msa0129550:CDS
TATTGGATTTAGCATCTTGA+AGG 0.438996 1_3:-59536919 Msa0129550:five_prime_UTR
TCTTTGCTTAAAACTATACT+TGG 0.441820 1_3:+59535182 None:intergenic
GCTGTGTTGGTCTTGTGGAT+TGG 0.442879 1_3:-59541424 Msa0129550:five_prime_UTR
GCTTTGTTCTTGTGTTCTTG+TGG 0.443410 1_3:-59532643 Msa0129550:five_prime_UTR
AGAAACCAAATGCACTGATC+GGG 0.445432 1_3:+59535498 None:intergenic
CATCATTGTTGGAACGCATC+TGG 0.446047 1_3:+59532681 None:intergenic
TACAGAGTATGATTGGCAAT+TGG 0.446126 1_3:-59530014 Msa0129550:CDS
TCCAGATGACAAAATATTCC+AGG 0.446856 1_3:+59534634 None:intergenic
GGATTTAGCATCTTGAAGGC+TGG 0.447383 1_3:-59536915 Msa0129550:five_prime_UTR
CTTTCAAGGGACAGGCCAAA+AGG 0.448987 1_3:-59526809 Msa0129550:CDS
TCATTCTGGGTCGTCGGGAA+TGG 0.449125 1_3:+59547584 None:intergenic
TCCTTGGCAACATCAGCTGC+TGG 0.449476 1_3:+59531853 None:intergenic
AAATGACCAAATGCTGCAAC+GGG 0.449953 1_3:-59527996 Msa0129550:CDS
GTTATTCATTCTGGGTCGTC+GGG 0.450914 1_3:+59547579 None:intergenic
TGCTGCTACCGAAAATTCAA+TGG 0.452046 1_3:-59547095 Msa0129550:five_prime_UTR
CATGCCCCTAGTCCTCCTAT+TGG 0.453220 1_3:-59536936 Msa0129550:five_prime_UTR
TTCCTCTGCTTGTCCGATGA+GGG 0.453306 1_3:-59538970 Msa0129550:five_prime_UTR
CTTCAAGCTGGTACACTTCA+AGG 0.453311 1_3:+59531647 None:intergenic
GAACAACGAAAAGCCGTTGC+CGG 0.453390 1_3:-59547232 Msa0129550:five_prime_UTR
AGAACCTACCTTCCTGTGAT+AGG 0.454253 1_3:-59526155 Msa0129550:intron
GCTTGGTGGGCAAAACTGAT+TGG 0.454845 1_3:-59544960 Msa0129550:five_prime_UTR
GGGGACTGCGCAAATGCTCG+CGG 0.455198 1_3:-59537709 Msa0129550:five_prime_UTR
TTGCTATCAATGGTGTATCT+TGG 0.455562 1_3:-59532611 Msa0129550:five_prime_UTR
CCTGCCATTCAGCTAGTAGT+TGG 0.455946 1_3:-59541491 Msa0129550:five_prime_UTR
CACCAAACATGTTGCAAAGC+TGG 0.456697 1_3:+59525674 None:intergenic
TAAATCTGATCTGGAGGAGA+TGG 0.457082 1_3:-59540819 Msa0129550:five_prime_UTR
GGGTCTAGAATCGGGATTGA+GGG 0.458236 1_3:-59535270 Msa0129550:five_prime_UTR
CAACCAGAGAGGATTGAGTC+TGG 0.458350 1_3:-59532078 Msa0129550:CDS
CAGCTTGACAGCATATCAAC+TGG 0.458708 1_3:+59526930 None:intergenic
AGCATGAACACATCCACTAA+TGG 0.459074 1_3:-59533298 Msa0129550:five_prime_UTR
GCAAGAGCTGAGGGTGAGCT+TGG 0.459846 1_3:-59525922 Msa0129550:CDS
GAATTCCAGTGTTGTCTTAG+CGG 0.460322 1_3:-59531944 Msa0129550:CDS
TCTTCCTGTAATGCAGCTGC+CGG 0.460512 1_3:+59535065 None:intergenic
CACTCAGCAAGTTCAGCATA+TGG 0.460896 1_3:-59526260 Msa0129550:CDS
TGGAGGTTTGACAGGACCTA+TGG 0.461583 1_3:-59526430 Msa0129550:CDS
ACTCAGCAAGTTCAGCATAT+GGG 0.461832 1_3:-59526259 Msa0129550:CDS
TCTTCTGCATTGGAGAAGAA+AGG 0.462205 1_3:-59537331 Msa0129550:five_prime_UTR
ACCAAGAAATAAATTACAAT+AGG 0.462645 1_3:+59544821 None:intergenic
TACTTGGATCAGTTGGAACC+AGG 0.464110 1_3:-59535602 Msa0129550:five_prime_UTR
CCAGTGACACGAAAGTATCT+TGG 0.464738 1_3:+59526671 None:intergenic
CCATGTCAGAATACCATTCA+AGG 0.464945 1_3:+59526852 None:intergenic
GTACGCATCGTAATTCATAA+AGG 0.465751 1_3:+59529798 None:intergenic
TGCGCTTCTTGTTCCACTTG+TGG 0.465931 1_3:+59534913 None:intergenic
ATACAATGTATTCCGTTGGT+TGG 0.466540 1_3:-59535213 Msa0129550:five_prime_UTR
CGTTATTCATTCTGGGTCGT+CGG 0.467011 1_3:+59547578 None:intergenic
TGATGAATCATTTCTCTGGC+AGG 0.467238 1_3:-59525633 Msa0129550:three_prime_UTR
CTTGCTAAAGCAGTTTCTCT+AGG 0.467578 1_3:-59529944 Msa0129550:CDS
ACAGGTTTACTTGGATCAGT+TGG 0.467632 1_3:-59535609 Msa0129550:five_prime_UTR
ACAGCGGAAAGTATTCATTC+GGG 0.468660 1_3:-59534962 Msa0129550:five_prime_UTR
AATTAAAAGAAAATTCCTAC+TGG 0.470532 1_3:-59547515 Msa0129550:five_prime_UTR
GCTGTTACTGTCAGTATTAG+CGG 0.471509 1_3:+59534980 None:intergenic
TCTTGTTAGGAATGCCATAT+CGG 0.472304 1_3:+59529903 None:intergenic
CTTGGTGGGCAAAACTGATT+GGG 0.472441 1_3:-59544959 Msa0129550:five_prime_UTR
ATAGAACGAGGTCAGAGCTC+GGG 0.472885 1_3:-59525737 Msa0129550:three_prime_UTR
TGGTAGCTGTGTTGGTCTTG+TGG 0.473172 1_3:-59541429 Msa0129550:five_prime_UTR
AACCTGCACGCTGAGCTTTG+AGG 0.474059 1_3:+59531827 None:intergenic
ACATATTCCTTCTCCTTCTG+TGG 0.474300 1_3:-59535895 Msa0129550:five_prime_UTR
GTTTCACGAATCAACTACTT+AGG 0.474405 1_3:-59529848 Msa0129550:CDS
GAAACCAATCATCTCAAAGA+TGG 0.474657 1_3:+59533615 None:intergenic
GAAGGAGGTTGTTGTTGCTA+TGG 0.475376 1_3:-59545073 Msa0129550:five_prime_UTR
ATCGAGCAATTATGTATAGT+TGG 0.475826 1_3:-59525483 Msa0129550:three_prime_UTR
TCTGGTTGAATCCCATCCTC+TGG 0.478937 1_3:+59532093 None:intergenic
ATTCCAGACTCAATCCTCTC+TGG 0.480135 1_3:+59532075 None:intergenic
TCTCTTGCAGAGTTCAGTCT+TGG 0.480764 1_3:-59544850 Msa0129550:intron
TATGACAGACTGGTAGAAGA+TGG 0.481136 1_3:+59531687 None:intergenic
GTATTCATTCGGGTTTATCT+GGG 0.481239 1_3:-59534952 Msa0129550:five_prime_UTR
AAAATATTCCAGGATGAGAA+TGG 0.481646 1_3:+59534644 None:intergenic
GAAAGCCTAATTCTCTCAAC+AGG 0.482385 1_3:+59532441 None:intergenic
TGTTATATGGGCTCCAATGC+TGG 0.484636 1_3:-59527947 Msa0129550:intron
AGATTCGTTGCCATGACTGC+TGG 0.485563 1_3:-59534575 Msa0129550:five_prime_UTR
AATATCATACTCAAGTGTTC+CGG 0.485679 1_3:+59533822 None:intergenic
GGAAGATATAGAGAATCAAT+AGG 0.486362 1_3:+59526761 None:intergenic
TTGGAAACTGGTCTTCAAGC+TGG 0.486943 1_3:+59531635 None:intergenic
TTGATAAACCCAAGTGGCCC+TGG 0.487098 1_3:+59535584 None:intergenic
CTGTGGCACTATCCAATACC+TGG 0.487173 1_3:-59539063 Msa0129550:five_prime_UTR
CAAAGTAGCTGATCAACATC+CGG 0.487177 1_3:+59534061 None:intergenic
TTCAAGATGCTAAATCCAAT+AGG 0.487241 1_3:+59536921 None:intergenic
ATGATTCGTGTGATTCAGTT+GGG 0.487864 1_3:+59533131 None:intergenic
AGGCCCAAGTTACATCTTCT+GGG 0.490025 1_3:-59532555 Msa0129550:five_prime_UTR
GTCGACTTCTGGCCAGAGGA+TGG 0.490303 1_3:-59532105 Msa0129550:CDS
TCACTGGTTCAGGTGACGTT+AGG 0.490457 1_3:-59526655 Msa0129550:CDS
ACGAATCTCACTTGTAGCAC+TGG 0.490665 1_3:+59534590 None:intergenic
TCCTTGAAGAAGATAGCGCC+TGG 0.491837 1_3:-59537049 Msa0129550:five_prime_UTR
GATCCTGCAAGTCTGCAGTT+AGG 0.492422 1_3:-59532728 Msa0129550:five_prime_UTR
TACCTGGAAGCAGAGCAAAT+TGG 0.493055 1_3:-59533469 Msa0129550:five_prime_UTR
TGGAATTAGCCATCCTTCAT+GGG 0.493596 1_3:-59541471 Msa0129550:five_prime_UTR
CCAAAAGGAAAGGGCAAACA+AGG 0.493853 1_3:+59539386 None:intergenic
GAGTATGATATTCTGCATCT+TGG 0.494140 1_3:-59533811 Msa0129550:five_prime_UTR
AGGTGACGTTAGGCCTTTGG+AGG 0.494230 1_3:-59526645 Msa0129550:CDS
TTTCCTTGCACTTATCATTG+TGG 0.494401 1_3:+59532031 None:intergenic
GGGGAAGGTTCTGGTTATTG+TGG 0.494842 1_3:-59535249 Msa0129550:five_prime_UTR
CAATACTCAACCCACAGTGC+TGG 0.495196 1_3:+59532471 None:intergenic
AAACATGATCACATTACTAC+TGG 0.495542 1_3:-59534787 Msa0129550:five_prime_UTR
ATTGTATATATCCTCGCAAA+TGG 0.496193 1_3:+59525945 None:intergenic
ACATTTCTGAATCTGAAACT+TGG 0.496349 1_3:-59539201 Msa0129550:five_prime_UTR
CTTCCTGTAATGCAGCTGCC+GGG 0.496516 1_3:+59535066 None:intergenic
ATTATGATGAATCATTTCTC+TGG 0.497062 1_3:-59525637 Msa0129550:three_prime_UTR
GTAAAGTATGAGAGAAAGAC+TGG 0.497281 1_3:+59541105 None:intergenic
GATTTAGCATCTTGAAGGCT+GGG 0.497645 1_3:-59536914 Msa0129550:five_prime_UTR
ATTCTTTCTGTAATTGGTGG+AGG 0.501323 1_3:-59531775 Msa0129550:CDS
ATATGCATTCAAATAGCCAT+TGG 0.502359 1_3:+59526967 None:intergenic
TTTCGTCTGCACCGACTGAA+TGG 0.503463 1_3:-59539285 Msa0129550:five_prime_UTR
GAACTTCAGTTTGCTATCAA+TGG 0.503477 1_3:-59532621 Msa0129550:five_prime_UTR
TACCTCTGCTCATTTGCCAC+GGG 0.504813 1_3:-59530085 Msa0129550:CDS
CACCAATTACAGAAAGAATA+CGG 0.504912 1_3:+59531779 None:intergenic
GGCTTTCGTGTATACAGCCC+AGG 0.505576 1_3:-59535299 Msa0129550:five_prime_UTR
TCAATGGGAAAATTTCTAGC+TGG 0.506339 1_3:-59547079 Msa0129550:five_prime_UTR
TTCAATACAATGTATTCCGT+TGG 0.507244 1_3:-59535217 Msa0129550:five_prime_UTR
ATAGCAACAACAACCTCCTT+CGG 0.508548 1_3:+59545075 None:intergenic
GAATAGAGCTACACACAGAC+AGG 0.509459 1_3:-59528034 Msa0129550:CDS
TGATTGAAAGGTGTGAGAAA+TGG 0.509905 1_3:+59525434 None:intergenic
CTTCTACCAAATAATGACAT+TGG 0.510796 1_3:-59533220 Msa0129550:five_prime_UTR
GATGTTGATCAGCTACTTTG+TGG 0.511378 1_3:-59534058 Msa0129550:five_prime_UTR
TTTCACCTGGATACTTTCAA+GGG 0.512095 1_3:-59526822 Msa0129550:CDS
ATCCTCAAAGCTCAGCGTGC+AGG 0.512159 1_3:-59531829 Msa0129550:CDS
GGCTTGTTGTTGATGATCCC+CGG 0.512272 1_3:-59534080 Msa0129550:five_prime_UTR
TATGCATTCAAATAGCCATT+GGG 0.512490 1_3:+59526968 None:intergenic
CCTGGATACTTTCAAGGGAC+AGG 0.512688 1_3:-59526817 Msa0129550:CDS
CTCAGCAAGTTCAGCATATG+GGG 0.514491 1_3:-59526258 Msa0129550:CDS
TGATTATGTGTGTCGCTACC+TGG 0.517228 1_3:-59533485 Msa0129550:five_prime_UTR
CATCTCTCACCATGTATGAC+TGG 0.518078 1_3:-59529754 Msa0129550:CDS
TGACGTTAGGCCTTTGGAGG+AGG 0.518527 1_3:-59526642 Msa0129550:intron
CTGAATTGAGCGAATCCCAC+TGG 0.518646 1_3:+59527005 None:intergenic
AATAGGCGATGGTGTTTCCC+AGG 0.519072 1_3:-59532933 Msa0129550:five_prime_UTR
CTGGGCTTAATGCCCACGTA+TGG 0.519154 1_3:-59525776 Msa0129550:three_prime_UTR
ATGTATTCCGTTGGTTGGAA+AGG 0.519938 1_3:-59535208 Msa0129550:five_prime_UTR
TTCTGAATCTGAAACTTGGA+CGG 0.519969 1_3:-59539197 Msa0129550:five_prime_UTR
TAACGCCCAAAGATGGTGAA+TGG 0.520461 1_3:-59532334 Msa0129550:five_prime_UTR
GATTTCCAATAGACTGCACC+TGG 0.520655 1_3:+59532915 None:intergenic
GTCTAGAATCGGGATTGAGG+GGG 0.520997 1_3:-59535268 Msa0129550:five_prime_UTR
GAGCTTTCTGAATATTTCAC+AGG 0.521944 1_3:-59532873 Msa0129550:five_prime_UTR
GACAAACGTAGCATCCTTGT+TGG 0.522899 1_3:-59547493 Msa0129550:five_prime_UTR
GATGATTCGTGTGATTCAGT+TGG 0.523650 1_3:+59533130 None:intergenic
GTGGAATATCCGAGTATGAT+TGG 0.524099 1_3:-59541193 Msa0129550:five_prime_UTR
ATCACTGTTTCTCACGGAGG+AGG 0.524315 1_3:+59536857 None:intergenic
AATTCTGTTTACAGTATACA+TGG 0.524417 1_3:-59535945 Msa0129550:five_prime_UTR
GATTGTTGCAACAATAGCAT+GGG 0.525465 1_3:-59537729 Msa0129550:five_prime_UTR
AGTATCAAATTCATCTTCTG+TGG 0.525787 1_3:+59535127 None:intergenic
TTCTGGTCATAAATGTTACT+GGG 0.526008 1_3:-59525794 Msa0129550:three_prime_UTR
TTTCTCATTGCTATAAAACC+TGG 0.526954 1_3:-59537665 Msa0129550:five_prime_UTR
CATGAAAATCTGGGAGATGG+TGG 0.527207 1_3:-59539088 Msa0129550:five_prime_UTR
CACCATGTATGACTGGCTAA+AGG 0.527661 1_3:-59529747 Msa0129550:intron
GGTCTAGAATCGGGATTGAG+GGG 0.527674 1_3:-59535269 Msa0129550:five_prime_UTR
TCAGATATTATGATTGCCAT+AGG 0.527721 1_3:+59526414 None:intergenic
AGCTCGGGGCAGTATGATGC+TGG 0.528685 1_3:-59525722 Msa0129550:three_prime_UTR
GTGTCACACCTTCCAGCACT+TGG 0.529434 1_3:+59533646 None:intergenic
AAGCCTTAAATAATCAAGAA+AGG 0.529659 1_3:+59533894 None:intergenic
CTCTGCTTGTCCGATGAGGG+AGG 0.530276 1_3:-59538967 Msa0129550:five_prime_UTR
TTTCAAGGGACAGGCCAAAA+GGG 0.530731 1_3:-59526808 Msa0129550:CDS
AAAGTAGCTGATCAACATCC+GGG 0.531317 1_3:+59534062 None:intergenic
TATACTAAGAAAGATTTGGA+TGG 0.531345 1_3:+59535422 None:intergenic
CCAACTACTAGCTGAATGGC+AGG 0.531350 1_3:+59541491 None:intergenic
ATTTCAGTAATTTCACAAAG+AGG 0.533062 1_3:+59533046 None:intergenic
CCTGTCCCTTGAAAGTATCC+AGG 0.533162 1_3:+59526817 None:intergenic
GACTGGTTCAGTCCCTTGAA+TGG 0.533492 1_3:-59526865 Msa0129550:CDS
AGTTCCATAACGCCCAAAGA+TGG 0.534142 1_3:-59532341 Msa0129550:five_prime_UTR
TGATTGTTGCAACAATAGCA+TGG 0.534458 1_3:-59537730 Msa0129550:five_prime_UTR
TTGTAGGATTTCATTTCCGA+AGG 0.535292 1_3:-59545091 Msa0129550:intron
CATCGAGACTCAAATTGAAT+CGG 0.535840 1_3:+59547129 None:intergenic
ATTACAGAAAGAATACGGTA+AGG 0.536226 1_3:+59531784 None:intergenic
AATATCCGAGTATGATTGGT+TGG 0.536687 1_3:-59541189 Msa0129550:five_prime_UTR
CATCATACCTCAGTGCAATC+GGG 0.536961 1_3:-59536021 Msa0129550:five_prime_UTR
CTTGTAGCACTGGGATTCAA+AGG 0.537745 1_3:+59534600 None:intergenic
ATGAAAGCTCCAAAAGGAAA+GGG 0.539129 1_3:+59539377 None:intergenic
TCTGAATCTGAAACTTGGAC+GGG 0.539598 1_3:-59539196 Msa0129550:intron
AATTGTCAGGAAAGCGATGT+AGG 0.539909 1_3:+59535964 None:intergenic
AAACCTGGTCTTCTTTATCA+GGG 0.540925 1_3:+59533194 None:intergenic
ATAATCCCACTAGTTATAGC+TGG 0.541134 1_3:-59532262 Msa0129550:five_prime_UTR
AGAGAATGAAGACAAGAAGC+AGG 0.541371 1_3:+59539262 None:intergenic
TTACATTTATCAACTTCCTG+TGG 0.541422 1_3:-59541212 Msa0129550:five_prime_UTR
TGCGAAATGAAAGCTCCAAA+AGG 0.541514 1_3:+59539371 None:intergenic
TTAACTTTCTGCTGATACCG+TGG 0.542066 1_3:+59537422 None:intergenic
AAAATGACCAAATGCTGCAA+CGG 0.542207 1_3:-59527997 Msa0129550:CDS
GAGGTGTTCTCTTTCTCCGC+CGG 0.543586 1_3:-59547188 Msa0129550:five_prime_UTR
AAAGCTATGGTACCTATCAC+AGG 0.543993 1_3:+59526143 None:intergenic
GGCAGCTGCATTACAGGAAG+AGG 0.544196 1_3:-59535063 Msa0129550:five_prime_UTR
AGTGACTTATCTGGTACTAT+GGG 0.544382 1_3:-59545012 Msa0129550:five_prime_UTR
CTCTCGCCAGCTATAACTAG+TGG 0.544586 1_3:+59532256 None:intergenic
AAGAAACCAAATGCACTGAT+CGG 0.546303 1_3:+59535497 None:intergenic
CTGCAAGTCTGCAGTTAGGA+AGG 0.546350 1_3:-59532724 Msa0129550:five_prime_UTR
CGATGTAGGTGCCACATGAT+CGG 0.547374 1_3:+59535978 None:intergenic
TTTGGTCCACTCAGTATTCG+CGG 0.547647 1_3:+59541135 None:intergenic
ATCATCTGCTTGTATGGACG+TGG 0.547932 1_3:-59533113 Msa0129550:five_prime_UTR
TGAAGTTTGCCCTCCCTCAT+CGG 0.548375 1_3:+59538957 None:intergenic
CACATGATCGGTATATAGAT+AGG 0.548642 1_3:+59535990 None:intergenic
GCTGCTACCGAAAATTCAAT+GGG 0.548676 1_3:-59547094 Msa0129550:five_prime_UTR
ATGCTCGCGGGCTATTATGT+TGG 0.549622 1_3:-59537696 Msa0129550:five_prime_UTR
ATAACCCAGAAGATGTAACT+TGG 0.550465 1_3:+59532551 None:intergenic
ATTGATATCAAGACAGAGAG+TGG 0.550659 1_3:-59527067 Msa0129550:CDS
CCTAATTCTCTCAACAGGCT+AGG 0.550827 1_3:+59532446 None:intergenic
TACCTTTAGCCAGTCATACA+TGG 0.553647 1_3:+59529745 None:intergenic
TAAATCCAATAGGAGGACTA+GGG 0.553842 1_3:+59536931 None:intergenic
AGTTGGAACCAGGGCCACTT+GGG 0.554775 1_3:-59535592 Msa0129550:five_prime_UTR
GCGTTATGGAACTTTGAATG+AGG 0.556310 1_3:+59532351 None:intergenic
TCTTCACTAGTGTCCAGTAA+AGG 0.556728 1_3:+59525887 None:intergenic
TCGTGAGCAGTTTGAGTGGT+GGG 0.557697 1_3:-59526493 Msa0129550:CDS
TCGACTTCTGGCCAGAGGAT+GGG 0.557875 1_3:-59532104 Msa0129550:CDS
TGTTGCAACAATCAATACCT+TGG 0.558759 1_3:+59537739 None:intergenic
GGGACTGCGCAAATGCTCGC+GGG 0.559034 1_3:-59537708 Msa0129550:five_prime_UTR
AATTCCAACTACTAGCTGAA+TGG 0.559145 1_3:+59541487 None:intergenic
AAGTACAATCAAGAAGAAGA+TGG 0.559641 1_3:+59530120 None:intergenic
CGGAAACTACCGCAACTAGC+CGG 0.559933 1_3:+59547213 None:intergenic
GAAGAAAGGCTCTGTAAGCA+TGG 0.560246 1_3:-59537317 Msa0129550:five_prime_UTR
GATGAATCATTTCTCTGGCA+GGG 0.560303 1_3:-59525632 Msa0129550:three_prime_UTR
CCTTGAATGGTATTCTGACA+TGG 0.560789 1_3:-59526852 Msa0129550:CDS
AAGCCGTTGCCGGCTAGTTG+CGG 0.562401 1_3:-59547222 Msa0129550:five_prime_UTR
TATAGAACGAGGTCAGAGCT+CGG 0.562734 1_3:-59525738 Msa0129550:three_prime_UTR
TAGGATTTCATTTCCGAAGG+AGG 0.562767 1_3:-59545088 Msa0129550:five_prime_UTR
GCAGAGCAAGCAGAACAGAC+AGG 0.562849 1_3:-59535627 Msa0129550:five_prime_UTR
CGAATCTCACTTGTAGCACT+GGG 0.564097 1_3:+59534591 None:intergenic
TTTCCTCTGCTTGTCCGATG+AGG 0.564538 1_3:-59538971 Msa0129550:five_prime_UTR
GGATGCTACGTTTGTCCAGT+AGG 0.564789 1_3:+59547500 None:intergenic
TAGTGGATGTGTTCATGCTA+TGG 0.565521 1_3:+59533302 None:intergenic
CATCGTAATTCATAAAGGAA+TGG 0.565746 1_3:+59529803 None:intergenic
CTCCCTCATCGGACAAGCAG+AGG 0.566278 1_3:+59538968 None:intergenic
GATCTAATCTCCCCAAAACC+TGG 0.566564 1_3:+59533179 None:intergenic
ATTCTAGACCCCAAAATCCT+GGG 0.567023 1_3:+59535282 None:intergenic
ACATGTTGTTCAGACTAGAC+TGG 0.567876 1_3:-59526882 Msa0129550:CDS
CTGAGGGTTTAAGAAGGAGG+AGG 0.568508 1_3:-59533252 Msa0129550:five_prime_UTR
AAAATGAATGCTTAGAGGGA+AGG 0.569010 1_3:+59540753 None:intergenic
GTTGTTAAATGCACTATCCA+TGG 0.569190 1_3:-59534754 Msa0129550:five_prime_UTR
TTATCAGGACATGAAAATCT+GGG 0.569554 1_3:-59539097 Msa0129550:intron
TGTATTCAAGAAGCATGTGC+GGG 0.570636 1_3:+59525854 None:intergenic
TATTGTGAGAAATGCTGGCT+TGG 0.573114 1_3:-59534528 Msa0129550:intron
CGTTATGGAACTTTGAATGA+GGG 0.573179 1_3:+59532352 None:intergenic
TGAGCAGCATGTTGTCGAGA+TGG 0.573372 1_3:+59529989 None:intergenic
AATGAAAGCTCCAAAAGGAA+AGG 0.573677 1_3:+59539376 None:intergenic
CTATAATCCACAGAAGGAGA+AGG 0.574184 1_3:+59535888 None:intergenic
AGTTTCATCACTGTTTCTCA+CGG 0.575403 1_3:+59536851 None:intergenic
AGCAAGCTAAAATGTTTCCC+GGG 0.575641 1_3:-59535352 Msa0129550:five_prime_UTR
TATGGTTCTAAAGGTGGTGG+AGG 0.576325 1_3:-59541273 Msa0129550:intron
GGACACTAGTGAAGATCTAT+CGG 0.576864 1_3:-59525879 Msa0129550:CDS
CTCATATTAATACTGGTGAC+CGG 0.577191 1_3:-59533841 Msa0129550:five_prime_UTR
CATGTCAGAATACCATTCAA+GGG 0.578459 1_3:+59526853 None:intergenic
GGACATGAAAATCTGGGAGA+TGG 0.579555 1_3:-59539091 Msa0129550:five_prime_UTR
CGGTGCAGACGAAATAAGGA+AGG 0.580477 1_3:+59539294 None:intergenic
TCATCCTTAAGTCAGAGCAC+TGG 0.581880 1_3:+59526190 None:intergenic
TCCAGCAGCTGATGTTGCCA+AGG 0.582254 1_3:-59531854 Msa0129550:CDS
AAATCTGATCTGGAGGAGAT+GGG 0.582459 1_3:-59540818 Msa0129550:five_prime_UTR
ATACTGTAAACAGAATTGTC+AGG 0.582638 1_3:+59535951 None:intergenic
CCACATCTGGAAAAGATACT+CGG 0.583205 1_3:+59535379 None:intergenic
GTATCAAATTCATCTTCTGT+GGG 0.583234 1_3:+59535128 None:intergenic
AAATCTTTCTTAGTATACAC+AGG 0.583287 1_3:-59535416 Msa0129550:five_prime_UTR
ATGAAAATCTGGGAGATGGT+GGG 0.584347 1_3:-59539087 Msa0129550:five_prime_UTR
GCTGTACAATTAATAGGCGA+TGG 0.584609 1_3:-59532944 Msa0129550:five_prime_UTR
ATGAATCATTTCTCTGGCAG+GGG 0.585550 1_3:-59525631 Msa0129550:three_prime_UTR
CATGGATGTCAGATGCTTGG+TGG 0.585552 1_3:-59544974 Msa0129550:five_prime_UTR
TTTCATTAAATCTGATCTGG+AGG 0.585612 1_3:-59540825 Msa0129550:five_prime_UTR
CACATAATCAAACTCTTGAG+AGG 0.586575 1_3:+59533498 None:intergenic
ATTCCTCTTAAATTTGAAGT+CGG 0.587143 1_3:+59532301 None:intergenic
ATATCAAGACAGAGAGTGGA+AGG 0.587632 1_3:-59527063 Msa0129550:CDS
AAATCATCATCCAGCACTGT+GGG 0.589193 1_3:-59532481 Msa0129550:five_prime_UTR
ATGGATGTCAGATGCTTGGT+GGG 0.589234 1_3:-59544973 Msa0129550:five_prime_UTR
GGATCAAGTATATGACGAGA+TGG 0.589874 1_3:-59532816 Msa0129550:five_prime_UTR
TAACATTTATGACCAGAAGA+TGG 0.589997 1_3:+59525799 None:intergenic
TCTGCTTGTCCGATGAGGGA+GGG 0.590586 1_3:-59538966 Msa0129550:five_prime_UTR
ACTTGGATCAGTTGGAACCA+GGG 0.591608 1_3:-59535601 Msa0129550:five_prime_UTR
GTTTATCTGGGGAAGCAACA+AGG 0.591826 1_3:-59534940 Msa0129550:five_prime_UTR
ATACTAAGAAAGATTTGGAT+GGG 0.592119 1_3:+59535423 None:intergenic
TCCTTTCAGATGTATAGCAG+TGG 0.592866 1_3:-59527136 Msa0129550:intron
ACAGGAAGGTAGGTTCTCGT+AGG 0.593126 1_3:+59526161 None:intergenic
TTACAGAAAGAATACGGTAA+GGG 0.593562 1_3:+59531785 None:intergenic
CAGGAAGGTAGGTTCTCGTA+GGG 0.594755 1_3:+59526162 None:intergenic
ATACCTCTGCTCATTTGCCA+CGG 0.595137 1_3:-59530086 Msa0129550:CDS
GAAAGCTAGCATCTTTAATG+GGG 0.597298 1_3:+59527092 None:intergenic
TTCTGGACAAATACATCTCG+AGG 0.598916 1_3:+59535762 None:intergenic
GCATCTGACATCCATGACAT+TGG 0.600366 1_3:+59544981 None:intergenic
TAGAACGAGGTCAGAGCTCG+GGG 0.600860 1_3:-59525736 Msa0129550:three_prime_UTR
TCATCTATTACCTCCTCCAA+AGG 0.600980 1_3:+59526632 None:intergenic
TATGGCAATCATAATATCTG+AGG 0.601706 1_3:-59526412 Msa0129550:CDS
AATCCCTGATAAAGAAGACC+AGG 0.601913 1_3:-59533197 Msa0129550:five_prime_UTR
ACGACAACGTAATATGCAAG+TGG 0.602538 1_3:-59533365 Msa0129550:five_prime_UTR
TGTTTGGTGCGGTGTCAAGA+TGG 0.602612 1_3:-59525660 Msa0129550:three_prime_UTR
TTTGGGCTACTTGCTTACGT+TGG 0.603422 1_3:-59539336 Msa0129550:five_prime_UTR
ATCATACTCGGATATTCCAC+AGG 0.603457 1_3:+59541196 None:intergenic
GGAGAAAGAGAACACCTCGC+CGG 0.605135 1_3:+59547193 None:intergenic
AAGTGCTGGAAGGTGTGACA+CGG 0.605305 1_3:-59533644 Msa0129550:five_prime_UTR
GGGTGAGCTTGGAGTTGAAG+AGG 0.605897 1_3:-59525911 Msa0129550:CDS
TATCAGCAGAAAGTTAAGAC+AGG 0.606106 1_3:-59537416 Msa0129550:five_prime_UTR
TGCAACTTTATAGCTATGAG+AGG 0.606260 1_3:-59535652 Msa0129550:five_prime_UTR
GATGACAATGCTGATCCCAA+TGG 0.606797 1_3:-59526983 Msa0129550:CDS
GTCTACCTATAATCCACAGA+AGG 0.607163 1_3:+59535882 None:intergenic
TCTCGCCAGCTATAACTAGT+GGG 0.607687 1_3:+59532257 None:intergenic
GTAGTGAGGCCCATGAAGGA+TGG 0.607856 1_3:+59541462 None:intergenic
ACATGGAAAGATTCATATTG+GGG 0.608911 1_3:-59544734 Msa0129550:five_prime_UTR
ATCAGTGGAGGGAGAGACCA+AGG 0.609870 1_3:-59537756 Msa0129550:intron
GGGCTATTAAGCCAATGTCA+TGG 0.610439 1_3:-59544992 Msa0129550:five_prime_UTR
AAGATGCTAAATCCAATAGG+AGG 0.610526 1_3:+59536924 None:intergenic
TAGCACCTATATATTTAATG+TGG 0.610824 1_3:-59539229 Msa0129550:five_prime_UTR
GGTACCTATCACAGGAAGGT+AGG 0.611509 1_3:+59526151 None:intergenic
TTGGCATCCTTTCCAACCAA+CGG 0.611541 1_3:+59535201 None:intergenic
CTTAGAGGGAAGGAGTTGCT+CGG 0.613156 1_3:+59540763 None:intergenic
AAAGGTAGTGAGGCCCATGA+AGG 0.613941 1_3:+59541458 None:intergenic
TGTCATGGATGTCAGATGCT+TGG 0.615510 1_3:-59544977 Msa0129550:five_prime_UTR
TATATACAATGCAAGAGCTG+AGG 0.615847 1_3:-59525932 Msa0129550:CDS
ATCGTGAGCAGTTTGAGTGG+TGG 0.615857 1_3:-59526494 Msa0129550:CDS
CTGACCTCGTTCTATATGTG+TGG 0.617388 1_3:+59525745 None:intergenic
TCTGGGAGATGGTGGGTCTG+TGG 0.618732 1_3:-59539080 Msa0129550:five_prime_UTR
ATATACAATGCAAGAGCTGA+GGG 0.619238 1_3:-59525931 Msa0129550:CDS
GCGAAAGAATACTAGAGCAA+AGG 0.620138 1_3:+59533780 None:intergenic
GAAACATACTATATACAGCA+TGG 0.620236 1_3:+59537636 None:intergenic
ATAGCTGGCGAGAGAAAGCA+TGG 0.620455 1_3:-59532247 Msa0129550:exon
GCACTGAGGGTTTAAGAAGG+AGG 0.620457 1_3:-59533255 Msa0129550:five_prime_UTR
GTGTATTCAAGAAGCATGTG+CGG 0.620895 1_3:+59525853 None:intergenic
TATCCACAATGATAAGTGCA+AGG 0.621158 1_3:-59532034 Msa0129550:CDS
ACAACAAATTCGTGAAAGTG+AGG 0.622557 1_3:-59533395 Msa0129550:five_prime_UTR
CCTTGAAGAAGATAGCGCCT+GGG 0.622735 1_3:-59537048 Msa0129550:five_prime_UTR
TGTGGCACTCAAACCATACG+TGG 0.623886 1_3:+59525763 None:intergenic
TGAGCACAAGATCTAACAGA+TGG 0.623945 1_3:+59533860 None:intergenic
ATTATGTATAGTTGGTAACC+AGG 0.625302 1_3:-59525475 Msa0129550:three_prime_UTR
TGAGGGTTTAAGAAGGAGGA+GGG 0.625433 1_3:-59533251 Msa0129550:five_prime_UTR
GAAGACGTGACCTTGTGTGT+TGG 0.627754 1_3:+59532419 None:intergenic
TACGTTTGTCTTCACCAACA+AGG 0.628334 1_3:+59547479 None:intergenic
ATAGCACTGAGGGTTTAAGA+AGG 0.630434 1_3:-59533258 Msa0129550:five_prime_UTR
GCAATCCAACCAATCATACT+CGG 0.630684 1_3:+59541184 None:intergenic
CTCTGTGTGAAAGAATCCAG+TGG 0.631996 1_3:-59527021 Msa0129550:CDS
AATTACACAATCATGAATCA+CGG 0.632223 1_3:+59525603 None:intergenic
GCGTCCAACAGCTAGAACAA+AGG 0.633800 1_3:+59526224 None:intergenic
GCAACAAGGAGAGCCACAAG+TGG 0.634061 1_3:-59534926 Msa0129550:five_prime_UTR
GACACTTGAACAAAATAAGG+AGG 0.634095 1_3:+59532135 None:intergenic
ACCATCATGTAATTCACACC+CGG 0.634178 1_3:-59535084 Msa0129550:five_prime_UTR
GAAACCAAATGCACTGATCG+GGG 0.634988 1_3:+59535499 None:intergenic
CAGACGAAATAAGGAAGGGA+AGG 0.636428 1_3:+59539299 None:intergenic
TAACCCAGAAGATGTAACTT+GGG 0.636983 1_3:+59532552 None:intergenic
CAAGAAGCAGGCCATTCAGT+CGG 0.638164 1_3:+59539274 None:intergenic
ACGATCCTGAAAAGCTAGAG+AGG 0.638523 1_3:+59533998 None:intergenic
AGTCTAGTCTGAACAACATG+TGG 0.639445 1_3:+59526884 None:intergenic
CTACCGCAACTAGCCGGCAA+CGG 0.639722 1_3:+59547219 None:intergenic
GAAGACCGCTAAGACAACAC+TGG 0.640772 1_3:+59531939 None:intergenic
AAAATAACATCTCAAAACCA+TGG 0.642450 1_3:+59536979 None:intergenic
AACTTTATAGCTATGAGAGG+AGG 0.644938 1_3:-59535649 Msa0129550:five_prime_UTR
GCCGGGTGTGAATTACATGA+TGG 0.645112 1_3:+59535083 None:intergenic
TTTAGGTTCTCATCTTCGGG+TGG 0.645171 1_3:-59541531 Msa0129550:intron
TAAATCGTGAGCAGTTTGAG+TGG 0.645308 1_3:-59526497 Msa0129550:CDS
TTGTTTCTTTGAGAAATGAG+CGG 0.647711 1_3:-59534890 Msa0129550:five_prime_UTR
TTCATCACTGTTTCTCACGG+AGG 0.648109 1_3:+59536854 None:intergenic
TACTGGAAATCACTCACACA+GGG 0.648471 1_3:-59532168 Msa0129550:CDS
TTCTGTGCAGATCTGGTGTG+AGG 0.650096 1_3:-59539984 Msa0129550:intron
TCTGTGTGAAAGAATCCAGT+GGG 0.651499 1_3:-59527020 Msa0129550:CDS
CTATCTATATACCGATCATG+TGG 0.652028 1_3:-59535989 Msa0129550:five_prime_UTR
TATTCATTCGGGTTTATCTG+GGG 0.656462 1_3:-59534951 Msa0129550:five_prime_UTR
GGTTAAGCTACAATCTGACC+CGG 0.657124 1_3:+59540784 None:intergenic
TCCCCGTGGCAAATGAGCAG+AGG 0.660854 1_3:+59530083 None:intergenic
GTCAGATTATGTCTCAGCGT+AGG 0.662061 1_3:-59533966 Msa0129550:five_prime_UTR
CAAATCATCATCCAGCACTG+TGG 0.663632 1_3:-59532482 Msa0129550:five_prime_UTR
TAGGTTGATAGCCATTTGCG+AGG 0.663891 1_3:-59525956 Msa0129550:CDS
GCTGGTATAAACTTCTTATG+CGG 0.664519 1_3:+59525692 None:intergenic
AAGCAGTGCAATATATACCA+TGG 0.664851 1_3:+59534737 None:intergenic
AAATCCAATAGGAGGACTAG+GGG 0.665917 1_3:+59536932 None:intergenic
GGATGTCGACTTCTGGCCAG+AGG 0.667236 1_3:-59532109 Msa0129550:CDS
GATGAAGTATCACGTGCTCG+AGG 0.667318 1_3:+59535002 None:intergenic
TTTAAGCAAAGAAAAGTGGG+AGG 0.668660 1_3:-59535171 Msa0129550:five_prime_UTR
AAACCTGATTAAAACGTTAG+GGG 0.668890 1_3:-59525829 Msa0129550:exon
CTATGGTACCTATCACAGGA+AGG 0.669859 1_3:+59526147 None:intergenic
CAGATCTGCACAAAATACGT+AGG 0.669996 1_3:+59531729 None:intergenic
AATAGAGCTACACACAGACA+GGG 0.670855 1_3:-59528033 Msa0129550:CDS
ATTAGGCTTTCCAACACACA+AGG 0.671729 1_3:-59532429 Msa0129550:five_prime_UTR
CTTTAGCAAGAAATATGGCA+CGG 0.671765 1_3:+59529957 None:intergenic
ATTGTTGCAACAATAGCATG+GGG 0.672476 1_3:-59537728 Msa0129550:five_prime_UTR
TCGGGGCAGTATGATGCTGG+TGG 0.673142 1_3:-59525719 Msa0129550:three_prime_UTR
AGACTGAATCACATTTGACA+AGG 0.675884 1_3:+59528058 None:intergenic
ACCTCTGCTCATTTGCCACG+GGG 0.676536 1_3:-59530084 Msa0129550:CDS
GCTAACTCAGTTGACTAACA+TGG 0.677751 1_3:-59532220 Msa0129550:CDS
ACGTGCTCGAGGCAAATCAG+AGG 0.680456 1_3:+59535013 None:intergenic
GTACTGGAAATCACTCACAC+AGG 0.681290 1_3:-59532169 Msa0129550:CDS
TATACAGCATGGATGAAACC+AGG 0.681347 1_3:+59537647 None:intergenic
AGAACAATCAGTTAAAGGCG+AGG 0.683681 1_3:+59531903 None:intergenic
AAATATCCGCGAATACTGAG+TGG 0.684551 1_3:-59541141 Msa0129550:five_prime_UTR
GTATTCAAGAAGCATGTGCG+GGG 0.685438 1_3:+59525855 None:intergenic
TAGAGCTACACACAGACAGG+GGG 0.695683 1_3:-59528031 Msa0129550:CDS
GGTGCAGACGAAATAAGGAA+GGG 0.698549 1_3:+59539295 None:intergenic
ATAGAGCTACACACAGACAG+GGG 0.700195 1_3:-59528032 Msa0129550:CDS
GCTTTGCAACATGTTTGGTG+CGG 0.701051 1_3:-59525671 Msa0129550:three_prime_UTR
AGTTGCGGTAGTTTCCGGCG+AGG 0.704345 1_3:-59547207 Msa0129550:five_prime_UTR
AGGATGGGATTCAACCAGAG+AGG 0.704603 1_3:-59532089 Msa0129550:CDS
ATTTGATACTGTATGTAACG+AGG 0.711125 1_3:-59535114 Msa0129550:five_prime_UTR
CGTGGAAACTCCATTAACAG+AGG 0.711610 1_3:-59533095 Msa0129550:five_prime_UTR
GTACCTGTTAGAAGCAACGA+GGG 0.712192 1_3:+59547046 None:intergenic
AATCGCTTGATAAACCCAAG+TGG 0.715677 1_3:+59535578 None:intergenic
TCAGCAAGTTCAGCATATGG+GGG 0.719833 1_3:-59526257 Msa0129550:CDS
AAGTAGCTGATCAACATCCG+GGG 0.720399 1_3:+59534063 None:intergenic
CGTACCTGTTAGAAGCAACG+AGG 0.723513 1_3:+59547045 None:intergenic
ACGAAGAAAGCACTTTCCGG+CGG 0.727418 1_3:+59547172 None:intergenic
ACTTCTGCCCGATTGCACTG+AGG 0.729225 1_3:+59536014 None:intergenic
ATAGAATATCACTTTCCCCG+TGG 0.729674 1_3:+59530069 None:intergenic
ATTTCCAATAGACTGCACCT+GGG 0.731095 1_3:+59532916 None:intergenic
GTGGCACTCAAACCATACGT+GGG 0.733532 1_3:+59525764 None:intergenic
GAGGGTTTAAGAAGGAGGAG+GGG 0.741298 1_3:-59533250 Msa0129550:five_prime_UTR
GCTAATACTGACAGTAACAG+CGG 0.743180 1_3:-59534978 Msa0129550:five_prime_UTR
AAATGAACATACAAACACAG+AGG 0.760630 1_3:-59532837 Msa0129550:five_prime_UTR
AGTGCCACACATATAGAACG+AGG 0.784293 1_3:-59525749 Msa0129550:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTAAAAAA+AGG + chr1_3:59544078-59544097 None:intergenic 0.0%
!!! TATCATCATTTTATTTTATT+TGG - chr1_3:59525693-59525712 Msa0129550:three_prime_UTR 10.0%
!!! TTTTTTTTTACAAAAAAGTT+GGG + chr1_3:59526978-59526997 None:intergenic 10.0%
!!! TTTTTTTTTTACAAAAAAGT+TGG + chr1_3:59526979-59526998 None:intergenic 10.0%
!!! AACTTTTTTGTAAAAAAAAA+AGG - chr1_3:59526978-59526997 Msa0129550:CDS 10.0%
!! AAAAAAAACAATAAATGAAA+AGG + chr1_3:59528060-59528079 None:intergenic 10.0%
!!! TCATAATAAGATTTTTATAT+TGG - chr1_3:59530336-59530355 Msa0129550:intron 10.0%
!!! CATAATAAGATTTTTATATT+GGG - chr1_3:59530337-59530356 Msa0129550:intron 10.0%
!! AAATGAAAGATTAAAAATTA+TGG + chr1_3:59531316-59531335 None:intergenic 10.0%
!! ATTATTAAGAAATTAATATG+GGG + chr1_3:59531385-59531404 None:intergenic 10.0%
!! CATTATTAAGAAATTAATAT+GGG + chr1_3:59531386-59531405 None:intergenic 10.0%
!! ACATTATTAAGAAATTAATA+TGG + chr1_3:59531387-59531406 None:intergenic 10.0%
!! ATAATTTATTAATATGTTTC+AGG + chr1_3:59533095-59533114 None:intergenic 10.0%
!!! ATTTTCCAAATTAATTTTTT+TGG - chr1_3:59533556-59533575 Msa0129550:five_prime_UTR 10.0%
!! CATTTAAAAAATTAAATTTG+GGG - chr1_3:59542224-59542243 Msa0129550:intron 10.0%
!!! TGAAGTATAATTAATTTTAA+AGG - chr1_3:59543421-59543440 Msa0129550:intron 10.0%
!!! TTTTAAAAAAAGGATTTTTA+TGG + chr1_3:59544068-59544087 None:intergenic 10.0%
!!! ATAATTACAATGAAATTTTT+CGG + chr1_3:59546622-59546641 None:intergenic 10.0%
!!! TTGTATAAGATTTTCTTTTT+TGG + chr1_3:59525596-59525615 None:intergenic 15.0%
!! AGATGTTGAAATAAATTAAA+AGG + chr1_3:59525629-59525648 None:intergenic 15.0%
!!! TATTTTCTTTTTTAAACCAA+AGG + chr1_3:59525662-59525681 None:intergenic 15.0%
!! TTTCAAACTAAAGAAATTTA+TGG - chr1_3:59526119-59526138 Msa0129550:intron 15.0%
!! AACAAACAGAAATATAAAAA+AGG + chr1_3:59526262-59526281 None:intergenic 15.0%
!! TAATTATTATCTCAAAGATA+AGG + chr1_3:59527794-59527813 None:intergenic 15.0%
!! TATCTTATAGATTATTTCAT+AGG - chr1_3:59528500-59528519 Msa0129550:intron 15.0%
!! ATCTTATAGATTATTTCATA+GGG - chr1_3:59528501-59528520 Msa0129550:intron 15.0%
!!! TTTAGAATCCTAAATAAATA+GGG + chr1_3:59528575-59528594 None:intergenic 15.0%
!!! ATTTAGAATCCTAAATAAAT+AGG + chr1_3:59528576-59528595 None:intergenic 15.0%
!!! TTTCAAGCTTAAATATTTTT+TGG - chr1_3:59529247-59529266 Msa0129550:intron 15.0%
!!! CTTAAATATTTTTTGGTTTA+TGG - chr1_3:59529254-59529273 Msa0129550:intron 15.0%
!! TTATTAAGAAATTAATATGG+GGG + chr1_3:59531384-59531403 None:intergenic 15.0%
!!! TGTTTATTTTATAATGAAGA+CGG - chr1_3:59532449-59532468 Msa0129550:five_prime_UTR 15.0%
!! TTAATAAATTATAATCTGCT+TGG - chr1_3:59533103-59533122 Msa0129550:five_prime_UTR 15.0%
!!! TGTTTGGATTTTATTATTTT+TGG - chr1_3:59533199-59533218 Msa0129550:five_prime_UTR 15.0%
!!! GTTTGGATTTTATTATTTTT+GGG - chr1_3:59533200-59533219 Msa0129550:five_prime_UTR 15.0%
!! ATATTAAGAAGATAGTTAAT+AGG + chr1_3:59533427-59533446 None:intergenic 15.0%
!! TTTAGCAAGAAAAAATAAAA+TGG + chr1_3:59534111-59534130 None:intergenic 15.0%
!! AAAATAGTAAGAAATCATAA+TGG + chr1_3:59534262-59534281 None:intergenic 15.0%
!! TAAGAAATATGATATTCTAA+GGG + chr1_3:59534883-59534902 None:intergenic 15.0%
!! TTAAGAAATATGATATTCTA+AGG + chr1_3:59534884-59534903 None:intergenic 15.0%
!! GTATATTCTTCAAATTAATT+TGG - chr1_3:59535616-59535635 Msa0129550:five_prime_UTR 15.0%
!!! AATATATATGAAATTTTGGA+TGG - chr1_3:59538131-59538150 Msa0129550:intron 15.0%
!!! ATCAGTTATAAACTTTTTTA+GGG - chr1_3:59538687-59538706 Msa0129550:intron 15.0%
!!! ATAAATATGATTATGGTTTT+CGG - chr1_3:59539381-59539400 Msa0129550:five_prime_UTR 15.0%
!!! AAAATAAAGACATATTCTTT+TGG + chr1_3:59541359-59541378 None:intergenic 15.0%
!! AGATGTAATAATAAAATTCA+TGG - chr1_3:59542519-59542538 Msa0129550:intron 15.0%
!!! TTTTTGTTTTTCAAATAGAA+GGG - chr1_3:59542635-59542654 Msa0129550:intron 15.0%
!! ATTAAAATTTATGAATTGCA+AGG + chr1_3:59543515-59543534 None:intergenic 15.0%
!!! TGCAATTCATAAATTTTAAT+AGG - chr1_3:59543515-59543534 Msa0129550:intron 15.0%
!!! GCAATTCATAAATTTTAATA+GGG - chr1_3:59543516-59543535 Msa0129550:intron 15.0%
!! ATAACATAAATATATGTGTT+TGG - chr1_3:59543838-59543857 Msa0129550:intron 15.0%
!!! ATCTATTTTTTTCAAAAACA+AGG + chr1_3:59544132-59544151 None:intergenic 15.0%
!! TAAAAAAAATCCAAAACAAA+CGG - chr1_3:59544292-59544311 Msa0129550:intron 15.0%
!! ATTCAAATAAGTTATTCATA+CGG + chr1_3:59544330-59544349 None:intergenic 15.0%
!! TTATAGAAAGTTTATACATA+AGG - chr1_3:59544520-59544539 Msa0129550:intron 15.0%
!! TATAGAAAGTTTATACATAA+GGG - chr1_3:59544521-59544540 Msa0129550:intron 15.0%
!!! TTGTATTAATTTGTGTTATA+TGG - chr1_3:59545012-59545031 Msa0129550:five_prime_UTR 15.0%
!!! TGTATTAATTTGTGTTATAT+GGG - chr1_3:59545013-59545032 Msa0129550:five_prime_UTR 15.0%
!!! TTAGTTTTACTACTTTTATT+AGG - chr1_3:59545178-59545197 Msa0129550:intron 15.0%
!!! AAAATTTTCAATAGCAATTT+AGG + chr1_3:59546411-59546430 None:intergenic 15.0%
!!! AATTTTGAATTCAATTTTTC+AGG - chr1_3:59546425-59546444 Msa0129550:five_prime_UTR 15.0%
!!! TTATTTTCGTTATTCATTCT+GGG + chr1_3:59525404-59525423 None:intergenic 20.0%
!!! TTTATTTTCGTTATTCATTC+TGG + chr1_3:59525405-59525424 None:intergenic 20.0%
!! AATTAAAAGAAAATTCCTAC+TGG - chr1_3:59525457-59525476 Msa0129550:three_prime_UTR 20.0%
!!! AAAATTTCTCAAAGTTTGTT+TGG + chr1_3:59525555-59525574 None:intergenic 20.0%
!!! AAATTTTCCCATTGAATTTT+CGG + chr1_3:59525888-59525907 None:intergenic 20.0%
!! ATAGTAATGTTATTGTAGTT+AGG + chr1_3:59526782-59526801 None:intergenic 20.0%
!!! TAATTAGTTTAGGTATTCTA+AGG + chr1_3:59527129-59527148 None:intergenic 20.0%
!!! TCATATCATGTAATTAGTTT+AGG + chr1_3:59527139-59527158 None:intergenic 20.0%
!! TAAATTCGTTTATGTTCTTA+GGG + chr1_3:59527198-59527217 None:intergenic 20.0%
!! TTAAATTCGTTTATGTTCTT+AGG + chr1_3:59527199-59527218 None:intergenic 20.0%
!! TCTCATTCAAATAAAAAGAA+CGG - chr1_3:59527467-59527486 Msa0129550:intron 20.0%
!!! ATGATTATAATTTTCTGCTT+TGG + chr1_3:59527549-59527568 None:intergenic 20.0%
!!! TATATCTGAAGTTATTCATA+TGG - chr1_3:59527812-59527831 Msa0129550:intron 20.0%
!! ACTACAGAAAAGATAATAAT+TGG + chr1_3:59527925-59527944 None:intergenic 20.0%
!!! TATACTGATTTCTTGATTTT+TGG - chr1_3:59528094-59528113 Msa0129550:intron 20.0%
!!! ATACTGATTTCTTGATTTTT+GGG - chr1_3:59528095-59528114 Msa0129550:intron 20.0%
!!! TCCTATTGTAATTTATTTCT+TGG - chr1_3:59528150-59528169 Msa0129550:intron 20.0%
!! ACCAAGAAATAAATTACAAT+AGG + chr1_3:59528154-59528173 None:intergenic 20.0%
!! TTGCTTTACTTGATATATAT+GGG - chr1_3:59528197-59528216 Msa0129550:intron 20.0%
!! ATATCAATTGTTGAACATTT+AGG - chr1_3:59528268-59528287 Msa0129550:intron 20.0%
!! AATTTGCAATATTAAATGTC+TGG - chr1_3:59528382-59528401 Msa0129550:intron 20.0%
!! TATTATTAGAAAATGATCCT+AGG + chr1_3:59528477-59528496 None:intergenic 20.0%
!! TAAGCAAATCTTTACTTATA+GGG + chr1_3:59528613-59528632 None:intergenic 20.0%
!!! ATATTACTGTTGGTAATAAA+TGG + chr1_3:59528658-59528677 None:intergenic 20.0%
!!! AGATACTATGTTTAAGTTAT+GGG + chr1_3:59528721-59528740 None:intergenic 20.0%
!!! TAGATACTATGTTTAAGTTA+TGG + chr1_3:59528722-59528741 None:intergenic 20.0%
!!! TTTTTGGTTTATGGTATTAT+TGG - chr1_3:59529263-59529282 Msa0129550:intron 20.0%
!! AACAACAAATTTGAAGAATT+GGG + chr1_3:59529446-59529465 None:intergenic 20.0%
!! TGAAAGATATGTTTATAAGT+AGG - chr1_3:59529845-59529864 Msa0129550:CDS 20.0%
!! GAAAGATATGTTTATAAGTA+GGG - chr1_3:59529846-59529865 Msa0129550:CDS 20.0%
!! AAAGATATGTTTATAAGTAG+GGG - chr1_3:59529847-59529866 Msa0129550:CDS 20.0%
!! CTTGATAAGAGTTTATATAA+AGG - chr1_3:59529921-59529940 Msa0129550:CDS 20.0%
!! CTTGATAAGAGTTTATATAA+AGG - chr1_3:59529921-59529940 Msa0129550:CDS 20.0%
!!! TTTAAAATGTGCTTATAAGT+TGG + chr1_3:59530408-59530427 None:intergenic 20.0%
!!! TTTTGCAAAGATTAACTTTT+AGG - chr1_3:59530695-59530714 Msa0129550:intron 20.0%
!!! TTGATAATACAACTAGATAA+TGG + chr1_3:59531242-59531261 None:intergenic 20.0%
!! AAGCAGAAAAATATTAAAAC+AGG + chr1_3:59531741-59531760 None:intergenic 20.0%
!! TCTCATACTTTACTATATAA+TGG - chr1_3:59531877-59531896 Msa0129550:CDS 20.0%
!!! TGTTTAGTTTATCTAATGTA+TGG - chr1_3:59532280-59532299 Msa0129550:five_prime_UTR 20.0%
!!! TTATGTCTCATGTAAAATTT+TGG - chr1_3:59532680-59532699 Msa0129550:five_prime_UTR 20.0%
!! AGTTAATAGGTAAAAACAAT+GGG + chr1_3:59533414-59533433 None:intergenic 20.0%
!! TAGTTAATAGGTAAAAACAA+TGG + chr1_3:59533415-59533434 None:intergenic 20.0%
!! CTATCTGTTGAAAATAAAAT+AGG - chr1_3:59533462-59533481 Msa0129550:five_prime_UTR 20.0%
!! ATAAAATGGATAATTGAAGA+GGG + chr1_3:59534097-59534116 None:intergenic 20.0%
!! AATAAAATGGATAATTGAAG+AGG + chr1_3:59534098-59534117 None:intergenic 20.0%
!! AGACAAATAAACAACATTTA+TGG - chr1_3:59534517-59534536 Msa0129550:intron 20.0%
!!! AAGAAACTTTTTCATTGTAT+CGG - chr1_3:59534772-59534791 Msa0129550:five_prime_UTR 20.0%
!! AAGAAATATGATATTCTAAG+GGG + chr1_3:59534882-59534901 None:intergenic 20.0%
!! ATATGATACCCTAAAATATT+GGG + chr1_3:59534914-59534933 None:intergenic 20.0%
!! AATATGATACCCTAAAATAT+TGG + chr1_3:59534915-59534934 None:intergenic 20.0%
!!! ATATTTTAGGGTATCATATT+TGG - chr1_3:59534915-59534934 Msa0129550:five_prime_UTR 20.0%
!!! TATTTTAGGGTATCATATTT+GGG - chr1_3:59534916-59534935 Msa0129550:five_prime_UTR 20.0%
!!! TTTTGACAGAAAAAGAATAA+GGG + chr1_3:59535149-59535168 None:intergenic 20.0%
!!! ATTTTGACAGAAAAAGAATA+AGG + chr1_3:59535150-59535169 None:intergenic 20.0%
!!! TTTTTCTGTCAAAATTGTTT+TGG - chr1_3:59535155-59535174 Msa0129550:five_prime_UTR 20.0%
!! AAAATACAGTTTAATTCGAT+GGG + chr1_3:59535442-59535461 None:intergenic 20.0%
!! TAAAATACAGTTTAATTCGA+TGG + chr1_3:59535443-59535462 None:intergenic 20.0%
!!! TGATTTTCTCAAATTATTAG+CGG - chr1_3:59536783-59536802 Msa0129550:intron 20.0%
!!! ATAGATCTCTATTTTTATCT+CGG - chr1_3:59537235-59537254 Msa0129550:intron 20.0%
!! GAGAATATATTTAATCTGTT+TGG - chr1_3:59538153-59538172 Msa0129550:intron 20.0%
!!! TATTTTAGCCTAAACATTAT+TGG - chr1_3:59538570-59538589 Msa0129550:intron 20.0%
!!! CATCAGTTATAAACTTTTTT+AGG - chr1_3:59538686-59538705 Msa0129550:intron 20.0%
!!! TCAGTTATAAACTTTTTTAG+GGG - chr1_3:59538688-59538707 Msa0129550:intron 20.0%
!!! TTTTTGCTTATATTTAAGAC+CGG + chr1_3:59538760-59538779 None:intergenic 20.0%
!! GGTTTCTATAAATATGATTA+TGG - chr1_3:59539374-59539393 Msa0129550:five_prime_UTR 20.0%
!! AGAAAAAGGAAAAAGTTAAA+GGG - chr1_3:59539978-59539997 Msa0129550:intron 20.0%
!! AATAAATAGACAAGAAAAAG+AGG + chr1_3:59540598-59540617 None:intergenic 20.0%
!!! AGAATATGTCTTTATTTTGA+TGG - chr1_3:59541361-59541380 Msa0129550:intron 20.0%
!! TTGAAAGAATAAGAAAGAAT+AGG - chr1_3:59541629-59541648 Msa0129550:intron 20.0%
!! AATTAGTATACATAGCAAAA+AGG + chr1_3:59541755-59541774 None:intergenic 20.0%
!!! AGTCATTTTCTCAATTTTAT+TGG - chr1_3:59542052-59542071 Msa0129550:intron 20.0%
!! AAAGAAAAAATTAAAAGAGG+TGG + chr1_3:59542348-59542367 None:intergenic 20.0%
!! TGTAATAATAAAATTCATGG+CGG - chr1_3:59542522-59542541 Msa0129550:intron 20.0%
!!! ATTATATAGAACCTTTGAAA+TGG - chr1_3:59542592-59542611 Msa0129550:intron 20.0%
!!! AAATGGTTCAGTTTATTTTA+TGG - chr1_3:59542609-59542628 Msa0129550:intron 20.0%
!!! CTTTTTGTTTTTCAAATAGA+AGG - chr1_3:59542634-59542653 Msa0129550:intron 20.0%
!! CGCAAGAAATTATAAAAAAA+AGG + chr1_3:59542678-59542697 None:intergenic 20.0%
!!! ATGATGGAAATTATACTTTT+TGG + chr1_3:59543291-59543310 None:intergenic 20.0%
!!! AATTTTAATAGGGAAATGAT+AGG - chr1_3:59543526-59543545 Msa0129550:intron 20.0%
!! AGATAAATACATTAAATACC+AGG + chr1_3:59543585-59543604 None:intergenic 20.0%
!!! TACATTCTAAAGACAAATAT+TGG + chr1_3:59543914-59543933 None:intergenic 20.0%
!!! ATTTGTCTTTAGAATGTAAA+CGG - chr1_3:59543916-59543935 Msa0129550:intron 20.0%
!!! TATTTTTTTCAAAAACAAGG+AGG + chr1_3:59544129-59544148 None:intergenic 20.0%
!!! TCCTAATAGTTTTTCATTTT+AGG - chr1_3:59544167-59544186 Msa0129550:intron 20.0%
!!! CCTAATAGTTTTTCATTTTA+GGG - chr1_3:59544168-59544187 Msa0129550:intron 20.0%
!!! CATCTTAAAGATTTGATTTT+TGG - chr1_3:59544709-59544728 Msa0129550:five_prime_UTR 20.0%
!! CACAAATTAATACAAAAAAC+AGG + chr1_3:59545007-59545026 None:intergenic 20.0%
!!! CTAAAAGTATAGCAAAATTT+GGG + chr1_3:59545221-59545240 None:intergenic 20.0%
!!! ACTAAAAGTATAGCAAAATT+TGG + chr1_3:59545222-59545241 None:intergenic 20.0%
!!! TGATGGATTAATATCTTTAA+AGG + chr1_3:59546505-59546524 None:intergenic 20.0%
!! CAAAATCTACTTAAATTTGA+TGG + chr1_3:59546522-59546541 None:intergenic 20.0%
!!! TCAAATTTAAGTAGATTTTG+TGG - chr1_3:59546522-59546541 Msa0129550:intron 20.0%
!! TTTATATTCATTCATTTGCA+TGG + chr1_3:59546870-59546889 None:intergenic 20.0%
!!! TTGTAGTGATTACTATTTTT+TGG - chr1_3:59547412-59547431 Msa0129550:five_prime_UTR 20.0%
!!! TGTAGTGATTACTATTTTTT+GGG - chr1_3:59547413-59547432 Msa0129550:five_prime_UTR 20.0%
! TACGAACAACTAATACTATA+AGG + chr1_3:59526065-59526084 None:intergenic 25.0%
! TTGTACAATGTATCACAATT+CGG - chr1_3:59526579-59526598 Msa0129550:intron 25.0%
! AATAACAGAATTCAATGCTT+AGG + chr1_3:59527253-59527272 None:intergenic 25.0%
!! ATTATAATTTTCTGCTTTGG+AGG + chr1_3:59527546-59527565 None:intergenic 25.0%
! AAAAACAACCTTAGTAATAG+TGG + chr1_3:59527857-59527876 None:intergenic 25.0%
!!! TACTGATTTCTTGATTTTTG+GGG - chr1_3:59528096-59528115 Msa0129550:intron 25.0%
!! GTTGCTTTACTTGATATATA+TGG - chr1_3:59528196-59528215 Msa0129550:intron 25.0%
! ATACATGGAAAGATTCATAT+TGG - chr1_3:59528236-59528255 Msa0129550:intron 25.0%
! TACATGGAAAGATTCATATT+GGG - chr1_3:59528237-59528256 Msa0129550:intron 25.0%
! AGAGGAAAAAATAAACAAGA+GGG + chr1_3:59528315-59528334 None:intergenic 25.0%
! AAGAGGAAAAAATAAACAAG+AGG + chr1_3:59528316-59528335 None:intergenic 25.0%
!! GAGATAAACCAAGATATTTT+GGG + chr1_3:59528455-59528474 None:intergenic 25.0%
! CCTAAATAAATAGGGAAATT+AGG + chr1_3:59528567-59528586 None:intergenic 25.0%
! CCTAATTTCCCTATTTATTT+AGG - chr1_3:59528564-59528583 Msa0129550:intron 25.0%
! CTAAGCAAATCTTTACTTAT+AGG + chr1_3:59528614-59528633 None:intergenic 25.0%
! AGAACTTGAAATATTACTGT+TGG + chr1_3:59528668-59528687 None:intergenic 25.0%
!! GTTATGGGTTATAAACAAAA+AGG + chr1_3:59528706-59528725 None:intergenic 25.0%
! TAATACATTCCCAAAGATTT+AGG + chr1_3:59528798-59528817 None:intergenic 25.0%
! AACAACAAAGAAAGAAAAGA+GGG + chr1_3:59528851-59528870 None:intergenic 25.0%
! AAACAACAAAGAAAGAAAAG+AGG + chr1_3:59528852-59528871 None:intergenic 25.0%
! CTTGAAACTAAGTTTAAGAA+CGG + chr1_3:59529234-59529253 None:intergenic 25.0%
! CAACAACAAATTTGAAGAAT+TGG + chr1_3:59529447-59529466 None:intergenic 25.0%
!!! CAATTCTTCAAATTTGTTGT+TGG - chr1_3:59529445-59529464 Msa0129550:intron 25.0%
! TGGAAAAAGTTTATAAAGAG+TGG + chr1_3:59529508-59529527 None:intergenic 25.0%
!!! ACTCTTTATAAACTTTTTCC+AGG - chr1_3:59529507-59529526 Msa0129550:intron 25.0%
! GATAAGAGTTTATATAAAGG+AGG - chr1_3:59529924-59529943 Msa0129550:CDS 25.0%
! TGATACCATGTTGAAATTTA+GGG + chr1_3:59529993-59530012 None:intergenic 25.0%
! GATAAGAGTTTATATAAAGG+AGG - chr1_3:59529924-59529943 Msa0129550:CDS 25.0%
!! AAAGGAGCTTTTATAAGTTT+TGG + chr1_3:59530914-59530933 None:intergenic 25.0%
! GGAAGAGTTTAAATTATTTG+TGG - chr1_3:59531001-59531020 Msa0129550:intron 25.0%
! AGAGTTTAAATTATTTGTGG+CGG - chr1_3:59531004-59531023 Msa0129550:intron 25.0%
!!! CTATATACTCCATTTTTCTT+TGG - chr1_3:59531159-59531178 Msa0129550:intron 25.0%
!!! GTTGTTTTTTTCTCTGTTTT+AGG - chr1_3:59531424-59531443 Msa0129550:intron 25.0%
! TTTGTCAAACTGAATATAGT+TGG - chr1_3:59531920-59531939 Msa0129550:CDS 25.0%
!!! GCTCTTTTTTATTCCTTTAT+TGG - chr1_3:59532044-59532063 Msa0129550:CDS 25.0%
! TGTTAAAAACAGCAAATGTT+TGG + chr1_3:59532084-59532103 None:intergenic 25.0%
! ATGAAAAATGAATGCTTAGA+GGG + chr1_3:59532226-59532245 None:intergenic 25.0%
! AATGAAAAATGAATGCTTAG+AGG + chr1_3:59532227-59532246 None:intergenic 25.0%
!!! CTTAAGTCTGATTTTTTGAA+AGG - chr1_3:59532383-59532402 Msa0129550:five_prime_UTR 25.0%
! CTGAATAAGATTGATTACAA+AGG + chr1_3:59532562-59532581 None:intergenic 25.0%
! AAGACAGAGAGAAAATAATA+TGG - chr1_3:59532591-59532610 Msa0129550:five_prime_UTR 25.0%
!! AATTTTACATGAGACATAAC+CGG + chr1_3:59532679-59532698 None:intergenic 25.0%
!! TATGATGTTCTTCTTTAAGA+TGG - chr1_3:59532833-59532852 Msa0129550:five_prime_UTR 25.0%
!! TTCTGTAACCAGATTATTTT+TGG - chr1_3:59532921-59532940 Msa0129550:five_prime_UTR 25.0%
!!! TCTGTAACCAGATTATTTTT+GGG - chr1_3:59532922-59532941 Msa0129550:five_prime_UTR 25.0%
!!! GTTTAATTTTTGACTGTTTG+TGG - chr1_3:59533331-59533350 Msa0129550:five_prime_UTR 25.0%
! GTTAATAGGTAAAAACAATG+GGG + chr1_3:59533413-59533432 None:intergenic 25.0%
!!! TCCAAATTAATTTTTTTGGC+AGG - chr1_3:59533560-59533579 Msa0129550:five_prime_UTR 25.0%
! ACCTGCCAAAAAAATTAATT+TGG + chr1_3:59533564-59533583 None:intergenic 25.0%
! TAGCACCTATATATTTAATG+TGG - chr1_3:59533743-59533762 Msa0129550:five_prime_UTR 25.0%
! AAACGCCACATTAAATATAT+AGG + chr1_3:59533751-59533770 None:intergenic 25.0%
!!! AACTCCTCTGAAATTTATTT+AGG - chr1_3:59534133-59534152 Msa0129550:intron 25.0%
! TAGGATGGTCAAAATTATTA+TGG - chr1_3:59534152-59534171 Msa0129550:intron 25.0%
! CTTCAAAATAGTCAACATTT+AGG - chr1_3:59534321-59534340 Msa0129550:intron 25.0%
! AACACAACAAAGTAATTTCA+GGG + chr1_3:59534591-59534610 None:intergenic 25.0%
! AGTATAATCCTGAAAATTGT+CGG - chr1_3:59534706-59534725 Msa0129550:five_prime_UTR 25.0%
!!! TTTGGATAAACTTGTTTTCT+TGG + chr1_3:59534749-59534768 None:intergenic 25.0%
!! ATGAAAAAGTTTCTTGCTTT+TGG + chr1_3:59534767-59534786 None:intergenic 25.0%
!! AGAAATATGATATTCTAAGG+GGG + chr1_3:59534881-59534900 None:intergenic 25.0%
!! AATTTTCACCCCAATATTTT+AGG - chr1_3:59534902-59534921 Msa0129550:five_prime_UTR 25.0%
!! ATTTTCACCCCAATATTTTA+GGG - chr1_3:59534903-59534922 Msa0129550:five_prime_UTR 25.0%
! TATGATACCCTAAAATATTG+GGG + chr1_3:59534913-59534932 None:intergenic 25.0%
!!! ATTTTAGGGTATCATATTTG+GGG - chr1_3:59534917-59534936 Msa0129550:five_prime_UTR 25.0%
!! AGCAAATACACAATTTTCTA+TGG + chr1_3:59535006-59535025 None:intergenic 25.0%
!!! TTTCTTTGTTTTGTTATCAG+TGG - chr1_3:59535201-59535220 Msa0129550:five_prime_UTR 25.0%
! TATTCTACAGATCAGTAAAA+TGG + chr1_3:59535394-59535413 None:intergenic 25.0%
! ATGGAAATTGTAATGCAATT+AGG - chr1_3:59535674-59535693 Msa0129550:five_prime_UTR 25.0%
! GTAACAATTCACAAAACATA+TGG + chr1_3:59535898-59535917 None:intergenic 25.0%
!! TATGTTTTGTGAATTGTTAC+AGG - chr1_3:59535898-59535917 Msa0129550:five_prime_UTR 25.0%
! AAAATAACATCTCAAAACCA+TGG + chr1_3:59535996-59536015 None:intergenic 25.0%
!!! AATTATCTTTAATTTGTGCC+AGG - chr1_3:59536282-59536301 Msa0129550:intron 25.0%
! GTAATGCCAAAAATTATTCT+AGG - chr1_3:59536449-59536468 Msa0129550:intron 25.0%
!! GTGAAAATCGTGAATATTTT+TGG + chr1_3:59536540-59536559 None:intergenic 25.0%
! TCCAAAAAGAACTATCAATT+CGG + chr1_3:59536616-59536635 None:intergenic 25.0%
! AAAAATATCTAAGTCTGCTT+AGG - chr1_3:59536649-59536668 Msa0129550:intron 25.0%
! AAAATATCTAAGTCTGCTTA+GGG - chr1_3:59536650-59536669 Msa0129550:intron 25.0%
!!! TATTTTTTTTAAGCACTCCT+CGG - chr1_3:59536696-59536715 Msa0129550:intron 25.0%
! GTAATTATATGTATCAGTGT+CGG + chr1_3:59536752-59536771 None:intergenic 25.0%
! AATAAAATGACGATGAAACA+TGG + chr1_3:59536912-59536931 None:intergenic 25.0%
! AATTCTGTTTACAGTATACA+TGG - chr1_3:59537027-59537046 Msa0129550:five_prime_UTR 25.0%
! TAACCAAATGATGTGTAATT+AGG + chr1_3:59537058-59537077 None:intergenic 25.0%
! GAAATTGCATATACTTTCAA+TGG + chr1_3:59537151-59537170 None:intergenic 25.0%
! AAAATAGAGATCTATCATTC+TGG + chr1_3:59537230-59537249 None:intergenic 25.0%
!! ATCTTCTTTTGACAATGTTT+GGG - chr1_3:59537273-59537292 Msa0129550:intron 25.0%
! ATACTAAGAAAGATTTGGAT+GGG + chr1_3:59537552-59537571 None:intergenic 25.0%
! TATACTAAGAAAGATTTGGA+TGG + chr1_3:59537553-59537572 None:intergenic 25.0%
! TGTGTATACTAAGAAAGATT+TGG + chr1_3:59537557-59537576 None:intergenic 25.0%
! AAATCTTTCTTAGTATACAC+AGG - chr1_3:59537556-59537575 Msa0129550:intron 25.0%
! TCTTTGCTTAAAACTATACT+TGG + chr1_3:59537793-59537812 None:intergenic 25.0%
!!! TAGTTTTAAGCAAAGAAAAG+TGG - chr1_3:59537797-59537816 Msa0129550:intron 25.0%
!!! AGTTTTAAGCAAAGAAAAGT+GGG - chr1_3:59537798-59537817 Msa0129550:intron 25.0%
! GCAAACAAAAAGACAAATAT+GGG + chr1_3:59538306-59538325 None:intergenic 25.0%
! AGCAAACAAAAAGACAAATA+TGG + chr1_3:59538307-59538326 None:intergenic 25.0%
!! TCTAATGGTTCAAGTTTATA+AGG - chr1_3:59538533-59538552 Msa0129550:intron 25.0%
!! CTAATGGTTCAAGTTTATAA+GGG - chr1_3:59538534-59538553 Msa0129550:intron 25.0%
! AGGAATCTGAACAAAATTAA+GGG + chr1_3:59538597-59538616 None:intergenic 25.0%
! CTTAAATATAAGCAAAACGT+TGG + chr1_3:59538799-59538818 None:intergenic 25.0%
!!! GTTTTGCTTATATTTAAGAC+AGG - chr1_3:59538801-59538820 Msa0129550:intron 25.0%
! AAGCCTTAAATAATCAAGAA+AGG + chr1_3:59539081-59539100 None:intergenic 25.0%
! ATTTCAGTAATTTCACAAAG+AGG + chr1_3:59539929-59539948 None:intergenic 25.0%
! GAGAAAAAGGAAAAAGTTAA+AGG - chr1_3:59539977-59539996 Msa0129550:five_prime_UTR 25.0%
! AAATCTGCTGTACAATTAAT+AGG - chr1_3:59540022-59540041 Msa0129550:intron 25.0%
! TCTCTATTTGTATGCTTTAT+GGG - chr1_3:59540387-59540406 Msa0129550:intron 25.0%
!! ATTCCTCTTAAATTTGAAGT+CGG + chr1_3:59540674-59540693 None:intergenic 25.0%
! ATAGACACTTGAACAAAATA+AGG + chr1_3:59540843-59540862 None:intergenic 25.0%
!!! TTATTTTGTTCAAGTGTCTA+TGG - chr1_3:59540842-59540861 Msa0129550:intron 25.0%
! TAGCAAAAGAGCAAATATTT+GGG + chr1_3:59540971-59540990 None:intergenic 25.0%
!!! TTTTGTTTTTTATGACAGAC+TGG + chr1_3:59541298-59541317 None:intergenic 25.0%
! TTAGTTTAATAGTACAACTG+TGG + chr1_3:59541454-59541473 None:intergenic 25.0%
!!! CTAAATTTTGGTTTCTAACT+TGG + chr1_3:59541494-59541513 None:intergenic 25.0%
!! TTCTCTTTTCAGCTAAATTT+TGG + chr1_3:59541506-59541525 None:intergenic 25.0%
! TTCAATACATGAATACTACA+AGG + chr1_3:59541614-59541633 None:intergenic 25.0%
! AGTAAAACACTATTGTTGAA+GGG + chr1_3:59541681-59541700 None:intergenic 25.0%
! AGGCAAAAATCTTAAAACAA+GGG + chr1_3:59542280-59542299 None:intergenic 25.0%
! GGGAAAGAAAAAATTAAAAG+AGG + chr1_3:59542351-59542370 None:intergenic 25.0%
!! AACTTTTATTAGCACGATTA+GGG + chr1_3:59542417-59542436 None:intergenic 25.0%
! AATAAACTGAACCATTTCAA+AGG + chr1_3:59542606-59542625 None:intergenic 25.0%
! TTTATAATTTCTTGCGTAAC+TGG - chr1_3:59542682-59542701 Msa0129550:intron 25.0%
! TAGAAGAAGTAAATTCAGTT+AGG + chr1_3:59542826-59542845 None:intergenic 25.0%
! AAAAGATGTATCAGTGAATA+CGG + chr1_3:59543339-59543358 None:intergenic 25.0%
! TATATTTGTTCTATTGTTCC+TGG - chr1_3:59543564-59543583 Msa0129550:intron 25.0%
! ATTTATCTTGTTCCTTATGT+TGG - chr1_3:59543597-59543616 Msa0129550:intron 25.0%
! GGTTGTGTAAAATTATTCAA+CGG + chr1_3:59543727-59543746 None:intergenic 25.0%
!! AAAGGATTTTTATGGATAGT+AGG + chr1_3:59544060-59544079 None:intergenic 25.0%
! CCCTAAAATGAAAAACTATT+AGG + chr1_3:59544171-59544190 None:intergenic 25.0%
! TCATTTGTAAGTGTTTGTTT+AGG + chr1_3:59544234-59544253 None:intergenic 25.0%
!!! ATGTCATAAGCTATTTTCAT+AGG + chr1_3:59544396-59544415 None:intergenic 25.0%
! ACTAATGATAGAATGACATA+AGG + chr1_3:59544606-59544625 None:intergenic 25.0%
! ATATCATTAGATAGGACTTT+GGG - chr1_3:59544635-59544654 Msa0129550:intron 25.0%
! ACCCACATTTAATAACTTAA+TGG - chr1_3:59545139-59545158 Msa0129550:intron 25.0%
! GCCATTAAGTTATTAAATGT+GGG + chr1_3:59545143-59545162 None:intergenic 25.0%
! TGCCATTAAGTTATTAAATG+TGG + chr1_3:59545144-59545163 None:intergenic 25.0%
!!! ATTTGTTATCTTTGAATGCT+AGG - chr1_3:59545476-59545495 Msa0129550:intron 25.0%
!! TTTGTTATCTTTGAATGCTA+GGG - chr1_3:59545477-59545496 Msa0129550:intron 25.0%
! TCATATAGCTAATTAAGAGT+AGG + chr1_3:59545503-59545522 None:intergenic 25.0%
!! TTAATATTTTACTCTTTGCC+CGG - chr1_3:59545642-59545661 Msa0129550:intron 25.0%
! AAACATGTTATATGCTATTG+TGG + chr1_3:59545791-59545810 None:intergenic 25.0%
! GATGTTCAAAAAGTTCTTAA+CGG - chr1_3:59546244-59546263 Msa0129550:intron 25.0%
!! AATTTAAGTAGATTTTGTGG+AGG - chr1_3:59546525-59546544 Msa0129550:intron 25.0%
! TTGATTTCAGAAATTCTCAA+GGG + chr1_3:59546901-59546920 None:intergenic 25.0%
!! ATTGATTTCAGAAATTCTCA+AGG + chr1_3:59546902-59546921 None:intergenic 25.0%
! ATTATGATGAATCATTTCTC+TGG - chr1_3:59547335-59547354 Msa0129550:five_prime_UTR 25.0%
! AATTACACAATCATGAATCA+CGG + chr1_3:59547372-59547391 None:intergenic 25.0%
!!! GTAGTGATTACTATTTTTTG+GGG - chr1_3:59547414-59547433 Msa0129550:five_prime_UTR 25.0%
!! AACACACAGATCATAATTTT+GGG + chr1_3:59547584-59547603 None:intergenic 25.0%
!! TAACACACAGATCATAATTT+TGG + chr1_3:59547585-59547604 None:intergenic 25.0%
!!! GATTCAGGTGTCATTTTAAT+AGG - chr1_3:59525523-59525542 Msa0129550:three_prime_UTR 30.0%
!!! ACATCTATTTTTGTTGCCTT+TGG - chr1_3:59525643-59525662 Msa0129550:three_prime_UTR 30.0%
TTGTTAAATAGCAGCTATCA+CGG - chr1_3:59526303-59526322 Msa0129550:intron 30.0%
ACTATACAACTATAGTGTAG+CGG - chr1_3:59526327-59526346 Msa0129550:intron 30.0%
TTGTTAAATAGCTGCTGTAA+CGG - chr1_3:59526403-59526422 Msa0129550:CDS 30.0%
!! GTAGCAGAATTTTAACAATC+CGG - chr1_3:59526443-59526462 Msa0129550:CDS 30.0%
!! AAAGCGTTGTACTATATATG+CGG - chr1_3:59526647-59526666 Msa0129550:CDS 30.0%
TTCAAAAGTTGAGAGAGATA+CGG - chr1_3:59526671-59526690 Msa0129550:CDS 30.0%
!! GTCATAAAGCGTTGTATTAA+TGG - chr1_3:59527077-59527096 Msa0129550:CDS 30.0%
TTTGAAAGAGAGGAATTTGT+TGG + chr1_3:59527277-59527296 None:intergenic 30.0%
ACAAATTCCTCTCTTTCAAA+CGG - chr1_3:59527277-59527296 Msa0129550:intron 30.0%
! AAATGAAGCCTATTTTGCAT+GGG + chr1_3:59527430-59527449 None:intergenic 30.0%
AGAAAAAGTCATCTAAGTAG+AGG - chr1_3:59527591-59527610 Msa0129550:intron 30.0%
! CCACTTAATTCCTTTTCTTA+AGG + chr1_3:59527635-59527654 None:intergenic 30.0%
CCTTAAGAAAAGGAATTAAG+TGG - chr1_3:59527632-59527651 Msa0129550:intron 30.0%
TAAGAAAAGGAATTAAGTGG+AGG - chr1_3:59527635-59527654 Msa0129550:intron 30.0%
!!! AAGGTTGTTTTTCTTGTTGT+AGG - chr1_3:59527865-59527884 Msa0129550:intron 30.0%
! AGAGACAGTTTTTGAATACA+TGG - chr1_3:59528221-59528240 Msa0129550:intron 30.0%
ACATGGAAAGATTCATATTG+GGG - chr1_3:59528238-59528257 Msa0129550:intron 30.0%
AACAATAGCCCAAAATATCT+TGG - chr1_3:59528444-59528463 Msa0129550:intron 30.0%
! GGAGATAAACCAAGATATTT+TGG + chr1_3:59528456-59528475 None:intergenic 30.0%
AATATCTTGGTTTATCTCCT+AGG - chr1_3:59528457-59528476 Msa0129550:intron 30.0%
!! CTTAGTCTTTTTACTCTAGT+TGG - chr1_3:59528629-59528648 Msa0129550:intron 30.0%
! ATGGGTTATAAACAAAAAGG+AGG + chr1_3:59528703-59528722 None:intergenic 30.0%
! AGTTGACTTCCTAAATCTTT+GGG - chr1_3:59528786-59528805 Msa0129550:intron 30.0%
TAAGTTTAAGAACGGTTTCT+GGG + chr1_3:59529226-59529245 None:intergenic 30.0%
CCAAGCAATCAAACAAATAA+AGG + chr1_3:59529325-59529344 None:intergenic 30.0%
! CCTTTATTTGTTTGATTGCT+TGG - chr1_3:59529322-59529341 Msa0129550:intron 30.0%
ACAAATTTGAAGAATTGGGA+AGG + chr1_3:59529442-59529461 None:intergenic 30.0%
!!! GCCTTATTTCTTTTCAATGT+GGG - chr1_3:59529529-59529548 Msa0129550:intron 30.0%
!! CCTTATTTCTTTTCAATGTG+GGG - chr1_3:59529530-59529549 Msa0129550:intron 30.0%
CCACTTATAAACATATCTTC+CGG + chr1_3:59529615-59529634 None:intergenic 30.0%
CGGAAGATATGTTTATAAGT+GGG - chr1_3:59529613-59529632 Msa0129550:intron 30.0%
GGAAGATATGTTTATAAGTG+GGG - chr1_3:59529614-59529633 Msa0129550:intron 30.0%
GATACCATGTTGAAATTTAG+GGG + chr1_3:59529992-59530011 None:intergenic 30.0%
CTGATACCATGTTGAAATTT+AGG + chr1_3:59529994-59530013 None:intergenic 30.0%
!!! ATTTTAGAGTCTATCCAATC+GGG + chr1_3:59530317-59530336 None:intergenic 30.0%
!!! GATTTTAGAGTCTATCCAAT+CGG + chr1_3:59530318-59530337 None:intergenic 30.0%
! AAAATGTGCTTATAAGTTGG+AGG + chr1_3:59530405-59530424 None:intergenic 30.0%
!! TGCCAACCTAAATTTTAAGA+TGG - chr1_3:59530543-59530562 Msa0129550:intron 30.0%
CACCATCTTAAAATTTAGGT+TGG + chr1_3:59530548-59530567 None:intergenic 30.0%
CTGACACCATCTTAAAATTT+AGG + chr1_3:59530552-59530571 None:intergenic 30.0%
GGTTAATATGTGAAAAACCA+AGG + chr1_3:59530770-59530789 None:intergenic 30.0%
CATTGGAAGCAAAATTATCT+CGG + chr1_3:59530791-59530810 None:intergenic 30.0%
TCGCAATACTTAAGCATTTA+GGG + chr1_3:59531064-59531083 None:intergenic 30.0%
CCATATATGCCAAAGAAAAA+TGG + chr1_3:59531171-59531190 None:intergenic 30.0%
!! CCATTTTTCTTTGGCATATA+TGG - chr1_3:59531168-59531187 Msa0129550:intron 30.0%
TACATATCTACCTGTTGAAT+TGG - chr1_3:59531276-59531295 Msa0129550:intron 30.0%
ACATATCTACCTGTTGAATT+GGG - chr1_3:59531277-59531296 Msa0129550:intron 30.0%
TAATATTAGCCCAATTCAAC+AGG + chr1_3:59531289-59531308 None:intergenic 30.0%
TTAAGAAATTAATATGGGGG+TGG + chr1_3:59531381-59531400 None:intergenic 30.0%
TCTTTAACAAGCAACTTTCT+TGG - chr1_3:59531571-59531590 Msa0129550:intron 30.0%
CTTTAACAAGCAACTTTCTT+GGG - chr1_3:59531572-59531591 Msa0129550:intron 30.0%
!!! GCTTTTCAGGTGATTTTATA+TGG - chr1_3:59531594-59531613 Msa0129550:intron 30.0%
TTACATTTATCAACTTCCTG+TGG - chr1_3:59531760-59531779 Msa0129550:CDS 30.0%
! AGAAAGACTGGAACAAATTT+TGG + chr1_3:59531858-59531877 None:intergenic 30.0%
TTTCCATTCTTCTTTCAACA+TGG - chr1_3:59531975-59531994 Msa0129550:CDS 30.0%
GTCTTTCATTAAATCTGATC+TGG - chr1_3:59532144-59532163 Msa0129550:CDS 30.0%
TTTCATTAAATCTGATCTGG+AGG - chr1_3:59532147-59532166 Msa0129550:CDS 30.0%
! CATTTTTCATTCGTGAATCA+AGG - chr1_3:59532236-59532255 Msa0129550:exon 30.0%
TATGGTATAGAAAAAGCTAG+TGG - chr1_3:59532298-59532317 Msa0129550:five_prime_UTR 30.0%
ATGGTATAGAAAAAGCTAGT+GGG - chr1_3:59532299-59532318 Msa0129550:five_prime_UTR 30.0%
! AGATAAAATCTCATTGGCTA+AGG + chr1_3:59532341-59532360 None:intergenic 30.0%
CTTGAGAGATAAAATCTCAT+TGG + chr1_3:59532347-59532366 None:intergenic 30.0%
! CAATGAGATTTTATCTCTCA+AGG - chr1_3:59532345-59532364 Msa0129550:five_prime_UTR 30.0%
AATCAGACTTAAGATAGAGT+AGG + chr1_3:59532376-59532395 None:intergenic 30.0%
ACCTAATTAAGGAAACACAA+GGG + chr1_3:59532506-59532525 None:intergenic 30.0%
!! ATTTTGGAAGACCAATTGAA+TGG - chr1_3:59532696-59532715 Msa0129550:five_prime_UTR 30.0%
!! TTTTGGAAGACCAATTGAAT+GGG - chr1_3:59532697-59532716 Msa0129550:five_prime_UTR 30.0%
! ATGGAGAAGCATAACTAATT+GGG + chr1_3:59532729-59532748 None:intergenic 30.0%
! AATTTCCATCTTTGCACTTT+TGG - chr1_3:59532786-59532805 Msa0129550:five_prime_UTR 30.0%
!!! CTGTAACCAGATTATTTTTG+GGG - chr1_3:59532923-59532942 Msa0129550:five_prime_UTR 30.0%
CATAATCCCCAAAAATAATC+TGG + chr1_3:59532932-59532951 None:intergenic 30.0%
!!! CAGATTATTTTTGGGGATTA+TGG - chr1_3:59532930-59532949 Msa0129550:five_prime_UTR 30.0%
!!! AGTATCAACTTTTTCACGTA+TGG - chr1_3:59533053-59533072 Msa0129550:five_prime_UTR 30.0%
! TATGTTTCAGGAGTATATAC+CGG + chr1_3:59533083-59533102 None:intergenic 30.0%
!! TTATAATCTGCTTGGTGTTA+TGG - chr1_3:59533111-59533130 Msa0129550:five_prime_UTR 30.0%
TTTCAAAAGTTCTCTCAGTA+AGG - chr1_3:59533236-59533255 Msa0129550:five_prime_UTR 30.0%
!! AGGTTTTGATCATAAACTGT+TGG - chr1_3:59533256-59533275 Msa0129550:five_prime_UTR 30.0%
!! GGTTTTGATCATAAACTGTT+GGG - chr1_3:59533257-59533276 Msa0129550:five_prime_UTR 30.0%
! TTTTCAACAGATAGTACAAG+TGG + chr1_3:59533456-59533475 None:intergenic 30.0%
ACATGTAAATAAAGAGAACG+AGG - chr1_3:59533486-59533505 Msa0129550:five_prime_UTR 30.0%
CATGTAAATAAAGAGAACGA+GGG - chr1_3:59533487-59533506 Msa0129550:five_prime_UTR 30.0%
! ACATTTCTGAATCTGAAACT+TGG - chr1_3:59533771-59533790 Msa0129550:five_prime_UTR 30.0%
ATAGCTGATACTTGTTTATC+AGG - chr1_3:59533860-59533879 Msa0129550:five_prime_UTR 30.0%
TTTATCAGGACATGAAAATC+TGG - chr1_3:59533874-59533893 Msa0129550:five_prime_UTR 30.0%
TTATCAGGACATGAAAATCT+GGG - chr1_3:59533875-59533894 Msa0129550:five_prime_UTR 30.0%
AGCAAAAAAAATCCAGGTAT+TGG + chr1_3:59533924-59533943 None:intergenic 30.0%
! GCAATTTTGTCTTGGAATTT+TGG - chr1_3:59533947-59533966 Msa0129550:five_prime_UTR 30.0%
! ATTTTGTCTTGGAATTTTGG+TGG - chr1_3:59533950-59533969 Msa0129550:five_prime_UTR 30.0%
AATGACTATTCCTCAGTAAA+AGG - chr1_3:59534038-59534057 Msa0129550:five_prime_UTR 30.0%
CCATCCTAAATAAATTTCAG+AGG + chr1_3:59534140-59534159 None:intergenic 30.0%
!! CCTCTGAAATTTATTTAGGA+TGG - chr1_3:59534137-59534156 Msa0129550:intron 30.0%
AGCTTCTATGTTATATCGTT+TGG - chr1_3:59534351-59534370 Msa0129550:intron 30.0%
! TTTGGATGTTGTAGTCATTT+TGG - chr1_3:59534369-59534388 Msa0129550:intron 30.0%
! TGGATTAAAAAGCTTTGATC+TGG - chr1_3:59534389-59534408 Msa0129550:intron 30.0%
! GGATTAAAAAGCTTTGATCT+GGG - chr1_3:59534390-59534409 Msa0129550:intron 30.0%
ACACAACAAAGTAATTTCAG+GGG + chr1_3:59534590-59534609 None:intergenic 30.0%
CAACACAACAAAGTAATTTC+AGG + chr1_3:59534592-59534611 None:intergenic 30.0%
! CTGAAATTACTTTGTTGTGT+TGG - chr1_3:59534590-59534609 Msa0129550:five_prime_UTR 30.0%
!!! TTTGTTTTGTTATCAGTGGA+GGG - chr1_3:59535205-59535224 Msa0129550:five_prime_UTR 30.0%
TTTCTCATTGCTATAAAACC+TGG - chr1_3:59535307-59535326 Msa0129550:five_prime_UTR 30.0%
GAAACATACTATATACAGCA+TGG + chr1_3:59535339-59535358 None:intergenic 30.0%
GGTCAAAATAATCAAGGTAA+AGG + chr1_3:59535421-59535440 None:intergenic 30.0%
! TTGATTTATCTTTTGAGCCA+CGG - chr1_3:59535533-59535552 Msa0129550:five_prime_UTR 30.0%
! TAATTTGGTTTCTTCTGCAT+TGG - chr1_3:59535631-59535650 Msa0129550:five_prime_UTR 30.0%
TAATGCAATTAGGTATGAGA+TGG - chr1_3:59535684-59535703 Msa0129550:five_prime_UTR 30.0%
TTCCTTGTTAGCTAACAAAT+GGG + chr1_3:59535863-59535882 None:intergenic 30.0%
TTTCCTTGTTAGCTAACAAA+TGG + chr1_3:59535864-59535883 None:intergenic 30.0%
TTTGTTAGCTAACAAGGAAA+TGG - chr1_3:59535864-59535883 Msa0129550:five_prime_UTR 30.0%
! TTTTGCACAATTCATAACCA+TGG - chr1_3:59535976-59535995 Msa0129550:five_prime_UTR 30.0%
TTCAAGATGCTAAATCCAAT+AGG + chr1_3:59536054-59536073 None:intergenic 30.0%
TATTGGATTTAGCATCTTGA+AGG - chr1_3:59536053-59536072 Msa0129550:intron 30.0%
AGTGATGAAACTTTCTCTTA+TGG - chr1_3:59536132-59536151 Msa0129550:intron 30.0%
! ACAGGTCCTAGAATAATTTT+TGG + chr1_3:59536458-59536477 None:intergenic 30.0%
TCTTCTTTATCTTGACGAAA+TGG - chr1_3:59536494-59536513 Msa0129550:intron 30.0%
CTTCTTTATCTTGACGAAAT+GGG - chr1_3:59536495-59536514 Msa0129550:intron 30.0%
!!! TCGTGAATATTTTTGGCATT+GGG + chr1_3:59536533-59536552 None:intergenic 30.0%
!!! ATCGTGAATATTTTTGGCAT+TGG + chr1_3:59536534-59536553 None:intergenic 30.0%
!! CAGACTTAGATATTTTTGAC+TGG + chr1_3:59536646-59536665 None:intergenic 30.0%
ATACTGTAAACAGAATTGTC+AGG + chr1_3:59537024-59537043 None:intergenic 30.0%
AAGCCTAATTACACATCATT+TGG - chr1_3:59537052-59537071 Msa0129550:five_prime_UTR 30.0%
! CATCTTCTTTTGACAATGTT+TGG - chr1_3:59537272-59537291 Msa0129550:intron 30.0%
! TTTGGTTTCTTGTATCTTCT+TGG - chr1_3:59537487-59537506 Msa0129550:intron 30.0%
!!! ACTGGAAGTTTTTGGTAATA+TGG + chr1_3:59537527-59537546 None:intergenic 30.0%
! TCTGATGTTTCTCTCATTTT+GGG - chr1_3:59537652-59537671 Msa0129550:five_prime_UTR 30.0%
TTCAATACAATGTATTCCGT+TGG - chr1_3:59537755-59537774 Msa0129550:intron 30.0%
GTATCAAATTCATCTTCTGT+GGG + chr1_3:59537847-59537866 None:intergenic 30.0%
AGTATCAAATTCATCTTCTG+TGG + chr1_3:59537848-59537867 None:intergenic 30.0%
ATTTGATACTGTATGTAACG+AGG - chr1_3:59537858-59537877 Msa0129550:intron 30.0%
! TTGTTTCTTTGAGAAATGAG+CGG - chr1_3:59538082-59538101 Msa0129550:intron 30.0%
AAACATGATCACATTACTAC+TGG - chr1_3:59538185-59538204 Msa0129550:intron 30.0%
AAAATATTCCAGGATGAGAA+TGG + chr1_3:59538331-59538350 None:intergenic 30.0%
AACCATTAGAGCCAAAAATA+AGG + chr1_3:59538523-59538542 None:intergenic 30.0%
GGAATCTGAACAAAATTAAG+GGG + chr1_3:59538596-59538615 None:intergenic 30.0%
CAGGAATCTGAACAAAATTA+AGG + chr1_3:59538598-59538617 None:intergenic 30.0%
ACAAAGACAACAGATAATTC+AGG + chr1_3:59538617-59538636 None:intergenic 30.0%
TACACGCATATTAAATACAC+TGG + chr1_3:59538721-59538740 None:intergenic 30.0%
GTACTATTAAATACTTCCTC+CGG - chr1_3:59538738-59538757 Msa0129550:intron 30.0%
! TTGCTTATATTTAAGACAGG+AGG - chr1_3:59538804-59538823 Msa0129550:intron 30.0%
TGAAACAATTAGGACAATGA+AGG + chr1_3:59538854-59538873 None:intergenic 30.0%
!!! CTTTTGAAACTAAAAGCATG+TGG - chr1_3:59539054-59539073 Msa0129550:five_prime_UTR 30.0%
GGACCTTTCTTGATTATTTA+AGG - chr1_3:59539075-59539094 Msa0129550:five_prime_UTR 30.0%
TCTTGTGCTCATATTAATAC+TGG - chr1_3:59539124-59539143 Msa0129550:intron 30.0%
AATATCATACTCAAGTGTTC+CGG + chr1_3:59539153-59539172 None:intergenic 30.0%
!! AATTCCATCTTTGAGATGAT+TGG - chr1_3:59539353-59539372 Msa0129550:five_prime_UTR 30.0%
!! AGAGATTATCATTTTTGTGC+TGG - chr1_3:59539427-59539446 Msa0129550:intron 30.0%
CTTCTACCAAATAATGACAT+TGG - chr1_3:59539752-59539771 Msa0129550:intron 30.0%
TTCTCTGAATCACTAGAAAA+AGG + chr1_3:59539962-59539981 None:intergenic 30.0%
TTCTAGTGATTCAGAGAAAA+AGG - chr1_3:59539964-59539983 Msa0129550:five_prime_UTR 30.0%
AAATGAACATACAAACACAG+AGG - chr1_3:59540135-59540154 Msa0129550:intron 30.0%
GAAATCTCTGCATATGTATT+TGG - chr1_3:59540186-59540205 Msa0129550:intron 30.0%
GAAGGATCTTTCGTTATATA+TGG - chr1_3:59540266-59540285 Msa0129550:intron 30.0%
GTAACATACTACATCATTGT+TGG + chr1_3:59540305-59540324 None:intergenic 30.0%
CTCTCTATTTGTATGCTTTA+TGG - chr1_3:59540386-59540405 Msa0129550:intron 30.0%
! TATGCTTTATGGGTTAATAC+AGG - chr1_3:59540397-59540416 Msa0129550:intron 30.0%
CTAGCAAAAGAGCAAATATT+TGG + chr1_3:59540972-59540991 None:intergenic 30.0%
! TATTTGCTCTTTTGCTAGTA+AGG - chr1_3:59540974-59540993 Msa0129550:intron 30.0%
TTACAGAAAGAATACGGTAA+GGG + chr1_3:59541190-59541209 None:intergenic 30.0%
ATTACAGAAAGAATACGGTA+AGG + chr1_3:59541191-59541210 None:intergenic 30.0%
TACCGTATTCTTTCTGTAAT+TGG - chr1_3:59541191-59541210 Msa0129550:five_prime_UTR 30.0%
CACCAATTACAGAAAGAATA+CGG + chr1_3:59541196-59541215 None:intergenic 30.0%
!! AGACATATTCTTTTGGAAAC+TGG + chr1_3:59541352-59541371 None:intergenic 30.0%
! GCTGAAAAGAGAAAACATTT+TGG - chr1_3:59541513-59541532 Msa0129550:five_prime_UTR 30.0%
ATAAGAAAGAATAGGAGAGA+AGG - chr1_3:59541637-59541656 Msa0129550:intron 30.0%
GAGTAAAACACTATTGTTGA+AGG + chr1_3:59541682-59541701 None:intergenic 30.0%
TGACAATTAGAGAAGTTAGT+TGG + chr1_3:59541790-59541809 None:intergenic 30.0%
TCTGACAGTATTCTTATTAC+CGG - chr1_3:59541891-59541910 Msa0129550:intron 30.0%
TTCAATGTAATCACATGTGT+CGG + chr1_3:59542029-59542048 None:intergenic 30.0%
!!! TTTTATTGGTGTTAACGTGT+CGG - chr1_3:59542066-59542085 Msa0129550:intron 30.0%
TAATAATTCCGAATAGAAGG+TGG + chr1_3:59542168-59542187 None:intergenic 30.0%
CTGTAATAATTCCGAATAGA+AGG + chr1_3:59542171-59542190 None:intergenic 30.0%
CGGAATTATTACAGTCTAAT+TGG - chr1_3:59542177-59542196 Msa0129550:intron 30.0%
! TCTAATTGGCTTATAGTCTT+GGG - chr1_3:59542191-59542210 Msa0129550:intron 30.0%
GCAAAAATCTTAAAACAAGG+GGG + chr1_3:59542278-59542297 None:intergenic 30.0%
GGCAAAAATCTTAAAACAAG+GGG + chr1_3:59542279-59542298 None:intergenic 30.0%
GAGGCAAAAATCTTAAAACA+AGG + chr1_3:59542281-59542300 None:intergenic 30.0%
! CAACTTTTATTAGCACGATT+AGG + chr1_3:59542418-59542437 None:intergenic 30.0%
AAAAGTTGAATTTCAGACCA+AGG - chr1_3:59542430-59542449 Msa0129550:intron 30.0%
GCATTTATTTAATCAGCTAG+AGG - chr1_3:59542782-59542801 Msa0129550:intron 30.0%
TGAATTTACTTCTTCTACTC+AGG - chr1_3:59542829-59542848 Msa0129550:intron 30.0%
AAGTACAATCAAGAAGAAGA+TGG + chr1_3:59542855-59542874 None:intergenic 30.0%
ATTCAGTTACAGAGTATGAT+TGG - chr1_3:59542951-59542970 Msa0129550:intron 30.0%
AACTGCTTTAGCAAGAAATA+TGG + chr1_3:59543023-59543042 None:intergenic 30.0%
CATCGTAATTCATAAAGGAA+TGG + chr1_3:59543172-59543191 None:intergenic 30.0%
GCTGAAAATAAACCAACATA+AGG + chr1_3:59543612-59543631 None:intergenic 30.0%
!!! ATGTTGGTTTATTTTCAGCT+TGG - chr1_3:59543613-59543632 Msa0129550:intron 30.0%
!!! TTATTTTCAGCTTGGTTTTG+TGG - chr1_3:59543621-59543640 Msa0129550:intron 30.0%
TGTGTAAAATTATTCAACGG+CGG + chr1_3:59543724-59543743 None:intergenic 30.0%
ACCTACCTATTTCAAATTGA+AGG - chr1_3:59543865-59543884 Msa0129550:intron 30.0%
! TCCTTCAATTTGAAATAGGT+AGG + chr1_3:59543869-59543888 None:intergenic 30.0%
TACCTATTTCAAATTGAAGG+AGG - chr1_3:59543868-59543887 Msa0129550:intron 30.0%
ACCTATTTCAAATTGAAGGA+GGG - chr1_3:59543869-59543888 Msa0129550:intron 30.0%
!! AAGGAGGGAAATTTTAGAAA+TGG - chr1_3:59543884-59543903 Msa0129550:intron 30.0%
!! AGGGAAATTTTAGAAATGGT+TGG - chr1_3:59543888-59543907 Msa0129550:intron 30.0%
TTGAGTATAGTCTGTGTTAT+TGG - chr1_3:59543949-59543968 Msa0129550:intron 30.0%
! TGAGTATAGTCTGTGTTATT+GGG - chr1_3:59543950-59543969 Msa0129550:intron 30.0%
GTTATTCATACGGCAAATAA+TGG + chr1_3:59544320-59544339 None:intergenic 30.0%
ACATGTGCATAAACTGTATT+TGG - chr1_3:59544412-59544431 Msa0129550:intron 30.0%
CTATAATCAAAGAGAAAGTG+TGG + chr1_3:59544506-59544525 None:intergenic 30.0%
CCTATCTAATGATATGTTGT+AGG + chr1_3:59544630-59544649 None:intergenic 30.0%
CCTACAACATATCATTAGAT+AGG - chr1_3:59544627-59544646 Msa0129550:intron 30.0%
CATATCATTAGATAGGACTT+TGG - chr1_3:59544634-59544653 Msa0129550:intron 30.0%
! TCTTCCAAATGAATTTTCAC+AGG + chr1_3:59544776-59544795 None:intergenic 30.0%
TCCTCAAGTATCAAATCATA+GGG + chr1_3:59545317-59545336 None:intergenic 30.0%
TTCCTCAAGTATCAAATCAT+AGG + chr1_3:59545318-59545337 None:intergenic 30.0%
ACTTGAGGAATTATCAAGTT+AGG - chr1_3:59545328-59545347 Msa0129550:intron 30.0%
CGTTACAAAAGTTAGAATTG+TGG + chr1_3:59545395-59545414 None:intergenic 30.0%
TATGTTGTTACAACAGCATT+CGG - chr1_3:59545424-59545443 Msa0129550:intron 30.0%
! TAATATTTTACTCTTTGCCC+GGG - chr1_3:59545643-59545662 Msa0129550:intron 30.0%
ATAAATACATTCAACTTCGG+GGG + chr1_3:59545723-59545742 None:intergenic 30.0%
GATAAATACATTCAACTTCG+GGG + chr1_3:59545724-59545743 None:intergenic 30.0%
GGATAAATACATTCAACTTC+GGG + chr1_3:59545725-59545744 None:intergenic 30.0%
GGGATAAATACATTCAACTT+CGG + chr1_3:59545726-59545745 None:intergenic 30.0%
TGAAAGCTAGCATCTTTAAT+GGG + chr1_3:59545884-59545903 None:intergenic 30.0%
TATGCATTCAAATAGCCATT+GGG + chr1_3:59546007-59546026 None:intergenic 30.0%
ATATGCATTCAAATAGCCAT+TGG + chr1_3:59546008-59546027 None:intergenic 30.0%
!!! ACATGGAAATTTTTTTCACC+TGG - chr1_3:59546137-59546156 Msa0129550:intron 30.0%
GGAAGATATAGAGAATCAAT+AGG + chr1_3:59546214-59546233 None:intergenic 30.0%
AGCAATTTAGGAACAATCAA+AGG + chr1_3:59546399-59546418 None:intergenic 30.0%
TCAGATATTATGATTGCCAT+AGG + chr1_3:59546561-59546580 None:intergenic 30.0%
TATGGCAATCATAATATCTG+AGG - chr1_3:59546560-59546579 Msa0129550:intron 30.0%
!! TTTTTCGGAGAAAAATTGCA+TGG + chr1_3:59546607-59546626 None:intergenic 30.0%
!! ACACTATGGGAAGTATTATT+AGG + chr1_3:59546649-59546668 None:intergenic 30.0%
GGCAATATTAGAAACACTAT+GGG + chr1_3:59546662-59546681 None:intergenic 30.0%
TGGCAATATTAGAAACACTA+TGG + chr1_3:59546663-59546682 None:intergenic 30.0%
!! TTTTTCTGGAAAGAAAGCTA+TGG + chr1_3:59546845-59546864 None:intergenic 30.0%
TTGTTACATGCTTCTAATGT+AGG - chr1_3:59546997-59547016 Msa0129550:intron 30.0%
ATTGTATATATCCTCGCAAA+TGG + chr1_3:59547030-59547049 None:intergenic 30.0%
CAAACCTGATTAAAACGTTA+GGG - chr1_3:59547142-59547161 Msa0129550:five_prime_UTR 30.0%
AAACCTGATTAAAACGTTAG+GGG - chr1_3:59547143-59547162 Msa0129550:five_prime_UTR 30.0%
TAACATTTATGACCAGAAGA+TGG + chr1_3:59547176-59547195 None:intergenic 30.0%
TTCTGGTCATAAATGTTACT+GGG - chr1_3:59547178-59547197 Msa0129550:five_prime_UTR 30.0%
ATCGAGCAATTATGTATAGT+TGG - chr1_3:59547489-59547508 Msa0129550:five_prime_UTR 30.0%
!! ATTATGTATAGTTGGTAACC+AGG - chr1_3:59547497-59547516 Msa0129550:five_prime_UTR 30.0%
CAAACGTATCATCTAGATTC+AGG - chr1_3:59525508-59525527 Msa0129550:three_prime_UTR 35.0%
CATCGAGACTCAAATTGAAT+CGG + chr1_3:59525846-59525865 None:intergenic 35.0%
!! TCAATGGGAAAATTTCTAGC+TGG - chr1_3:59525893-59525912 Msa0129550:CDS 35.0%
AGTAACAGAGTGTGTTTACT+AGG - chr1_3:59525985-59526004 Msa0129550:intron 35.0%
TTGCAGCTTCTTTAATCAAC+TGG - chr1_3:59526514-59526533 Msa0129550:CDS 35.0%
! AAGCGTTGTACTATATATGC+GGG - chr1_3:59526648-59526667 Msa0129550:CDS 35.0%
AGTTATGCATGCATACACAA+AGG + chr1_3:59527025-59527044 None:intergenic 35.0%
TTCAAAACCGTTTGAAAGAG+AGG + chr1_3:59527287-59527306 None:intergenic 35.0%
TGTTCATCTGTATGAACTCT+AGG + chr1_3:59527328-59527347 None:intergenic 35.0%
! GAGAGAATTTGAAGCCATAA+AGG - chr1_3:59527385-59527404 Msa0129550:intron 35.0%
CAAAATCAACTGCTCCTTTA+TGG + chr1_3:59527402-59527421 None:intergenic 35.0%
! TTGTTGTTCCCATGCAAAAT+AGG - chr1_3:59527419-59527438 Msa0129550:intron 35.0%
! GAAATGAAGCCTATTTTGCA+TGG + chr1_3:59527431-59527450 None:intergenic 35.0%
TTTGAATGAGATCCTGATCT+TGG + chr1_3:59527458-59527477 None:intergenic 35.0%
AAAAGAACGGAGATAACTTC+AGG - chr1_3:59527480-59527499 Msa0129550:intron 35.0%
AAAAGTCATCTAAGTAGAGG+AGG - chr1_3:59527594-59527613 Msa0129550:intron 35.0%
!! TGGTGGTTGTTTCTATTTGA+AGG - chr1_3:59527703-59527722 Msa0129550:intron 35.0%
!! TGGTTGTTTCTATTTGAAGG+AGG - chr1_3:59527706-59527725 Msa0129550:intron 35.0%
!! GGTTGTTTCTATTTGAAGGA+GGG - chr1_3:59527707-59527726 Msa0129550:intron 35.0%
TTCGTTCTCCACTATTACTA+AGG - chr1_3:59527846-59527865 Msa0129550:intron 35.0%
TTGTAGGATTTCATTTCCGA+AGG - chr1_3:59527881-59527900 Msa0129550:intron 35.0%
AAGTGACTTATCTGGTACTA+TGG - chr1_3:59527959-59527978 Msa0129550:CDS 35.0%
AGTGACTTATCTGGTACTAT+GGG - chr1_3:59527960-59527979 Msa0129550:CDS 35.0%
CATAGAAATCAAAAGCGAAG+AGG + chr1_3:59528333-59528352 None:intergenic 35.0%
! TAAACATAGTATCTAGAGCC+TGG - chr1_3:59528727-59528746 Msa0129550:intron 35.0%
! CAGTTGACTTCCTAAATCTT+TGG - chr1_3:59528785-59528804 Msa0129550:intron 35.0%
AAGGATGACAGGACAAAAAT+TGG + chr1_3:59528878-59528897 None:intergenic 35.0%
GAACTTGTAGTCACACATAT+AGG + chr1_3:59529051-59529070 None:intergenic 35.0%
AAATGCTAAGCTAGAACTAC+CGG + chr1_3:59529147-59529166 None:intergenic 35.0%
CTAAGTTTAAGAACGGTTTC+TGG + chr1_3:59529227-59529246 None:intergenic 35.0%
! TCCAGATATGGTATTGAGAA+AGG - chr1_3:59529295-59529314 Msa0129550:intron 35.0%
ACCTTTCTCAATACCATATC+TGG + chr1_3:59529299-59529318 None:intergenic 35.0%
! AGATATGGTATTGAGAAAGG+TGG - chr1_3:59529298-59529317 Msa0129550:intron 35.0%
TAATGATCATTCCAGCTATC+TGG - chr1_3:59529364-59529383 Msa0129550:intron 35.0%
AGAGAGAATCACCATAAAGA+TGG + chr1_3:59529395-59529414 None:intergenic 35.0%
CATTGAAAAGAAATAAGGCC+TGG + chr1_3:59529528-59529547 None:intergenic 35.0%
!!! GGCCTTATTTCTTTTCAATG+TGG - chr1_3:59529528-59529547 Msa0129550:intron 35.0%
CCCCACATTGAAAAGAAATA+AGG + chr1_3:59529533-59529552 None:intergenic 35.0%
CCGGAAGATATGTTTATAAG+TGG - chr1_3:59529612-59529631 Msa0129550:intron 35.0%
ACGATCAAGAATTTGTGGTT+GGG + chr1_3:59529683-59529702 None:intergenic 35.0%
GATATGTTTATAAGTAGGGG+AGG - chr1_3:59529850-59529869 Msa0129550:CDS 35.0%
!! AGGTGAGTGTTGAAATTTAG+GGG + chr1_3:59530198-59530217 None:intergenic 35.0%
!! GAGGTGAGTGTTGAAATTTA+GGG + chr1_3:59530199-59530218 None:intergenic 35.0%
!! TGAGGTGAGTGTTGAAATTT+AGG + chr1_3:59530200-59530219 None:intergenic 35.0%
! CAGTGTTGAGATAACTACAT+TGG + chr1_3:59530443-59530462 None:intergenic 35.0%
CTCAACACTGAAAAGAGATA+AGG - chr1_3:59530453-59530472 Msa0129550:intron 35.0%
! CGAGATAATTTTGCTTCCAA+TGG - chr1_3:59530789-59530808 Msa0129550:intron 35.0%
! TGACTTTAAGGATGTCACTA+CGG + chr1_3:59530819-59530838 None:intergenic 35.0%
! AGTGTGTATCGATGACTTTA+AGG + chr1_3:59530831-59530850 None:intergenic 35.0%
CGATACACACTCTTATAGTT+TGG - chr1_3:59530840-59530859 Msa0129550:intron 35.0%
GTCAACTAGAGATATGACAA+AGG + chr1_3:59530932-59530951 None:intergenic 35.0%
! ATCAAATCTAAGGCATGTGT+TGG - chr1_3:59531035-59531054 Msa0129550:intron 35.0%
GTCGCAATACTTAAGCATTT+AGG + chr1_3:59531065-59531084 None:intergenic 35.0%
!! AACTAGATAATGGCTCTAGA+TGG + chr1_3:59531232-59531251 None:intergenic 35.0%
!!! CTGTTTTAGGTTCTCATCTT+CGG - chr1_3:59531437-59531456 Msa0129550:intron 35.0%
!!! TGTTTTAGGTTCTCATCTTC+GGG - chr1_3:59531438-59531457 Msa0129550:intron 35.0%
AATTCCAACTACTAGCTGAA+TGG + chr1_3:59531488-59531507 None:intergenic 35.0%
ACCAATGAAAAAAGGTAGTG+AGG + chr1_3:59531527-59531546 None:intergenic 35.0%
ACACAGCTACCAATGAAAAA+AGG + chr1_3:59531535-59531554 None:intergenic 35.0%
!! TTTTTCATTGGTAGCTGTGT+TGG - chr1_3:59531535-59531554 Msa0129550:intron 35.0%
TGCTCATTCATCATCTCTTT+AGG - chr1_3:59531629-59531648 Msa0129550:CDS 35.0%
TCATTCATCATCTCTTTAGG+CGG - chr1_3:59531632-59531651 Msa0129550:CDS 35.0%
! ACACCCTTTTTAACGTACTT+TGG - chr1_3:59531661-59531680 Msa0129550:CDS 35.0%
! CACCCTTTTTAACGTACTTT+GGG - chr1_3:59531662-59531681 Msa0129550:CDS 35.0%
AGCCCAAAGTACGTTAAAAA+GGG + chr1_3:59531667-59531686 None:intergenic 35.0%
AAGCCCAAAGTACGTTAAAA+AGG + chr1_3:59531668-59531687 None:intergenic 35.0%
!! GTCTGTGTATATGGTTCTAA+AGG - chr1_3:59531690-59531709 Msa0129550:CDS 35.0%
!! TGTGTATATGGTTCTAAAGG+TGG - chr1_3:59531693-59531712 Msa0129550:CDS 35.0%
AATATCCGAGTATGATTGGT+TGG - chr1_3:59531783-59531802 Msa0129550:CDS 35.0%
GTAAAGTATGAGAGAAAGAC+TGG + chr1_3:59531870-59531889 None:intergenic 35.0%
TCTCCATGTTGAAAGAAGAA+TGG + chr1_3:59531981-59532000 None:intergenic 35.0%
!! GAGATGGGTGTTATTATTTC+CGG - chr1_3:59532169-59532188 Msa0129550:CDS 35.0%
!! AGATGGGTGTTATTATTTCC+GGG - chr1_3:59532170-59532189 Msa0129550:CDS 35.0%
AAAATGAATGCTTAGAGGGA+AGG + chr1_3:59532222-59532241 None:intergenic 35.0%
TCCCTTGTGTTTCCTTAATT+AGG - chr1_3:59532502-59532521 Msa0129550:five_prime_UTR 35.0%
CACCTAATTAAGGAAACACA+AGG + chr1_3:59532507-59532526 None:intergenic 35.0%
CTTGTGTTTCCTTAATTAGG+TGG - chr1_3:59532505-59532524 Msa0129550:five_prime_UTR 35.0%
TGTTTCCTTAATTAGGTGGT+AGG - chr1_3:59532509-59532528 Msa0129550:five_prime_UTR 35.0%
GTATTCCCTTGTATTTCAAC+CGG - chr1_3:59532657-59532676 Msa0129550:five_prime_UTR 35.0%
CATAACCGGTTGAAATACAA+GGG + chr1_3:59532665-59532684 None:intergenic 35.0%
ACATAACCGGTTGAAATACA+AGG + chr1_3:59532666-59532685 None:intergenic 35.0%
TGGGAAATTTCCCATTCAAT+TGG + chr1_3:59532710-59532729 None:intergenic 35.0%
! CATGGAGAAGCATAACTAAT+TGG + chr1_3:59532730-59532749 None:intergenic 35.0%
CCTGAAAGGAAAAAAAGACA+TGG + chr1_3:59532748-59532767 None:intergenic 35.0%
!!! CCATGTCTTTTTTTCCTTTC+AGG - chr1_3:59532745-59532764 Msa0129550:five_prime_UTR 35.0%
CAAAGATGGAAATTGTGGAT+AGG + chr1_3:59532780-59532799 None:intergenic 35.0%
AAGTGCAAAGATGGAAATTG+TGG + chr1_3:59532785-59532804 None:intergenic 35.0%
! TACAACCAAAAGTGCAAAGA+TGG + chr1_3:59532794-59532813 None:intergenic 35.0%
TGGATGATGTTACAAAAACG+TGG - chr1_3:59532853-59532872 Msa0129550:five_prime_UTR 35.0%
!! TTTTTGGGGATTATGGAATG+TGG - chr1_3:59532937-59532956 Msa0129550:five_prime_UTR 35.0%
GAAAATTCAGGCAACACAAT+TGG + chr1_3:59532971-59532990 None:intergenic 35.0%
! CACACAAATGTTTTACTCAG+AGG - chr1_3:59533011-59533030 Msa0129550:five_prime_UTR 35.0%
! ATGTTTCAGGAGTATATACC+GGG + chr1_3:59533082-59533101 None:intergenic 35.0%
! TCACAGTCCTTCCTTTATTT+GGG - chr1_3:59533167-59533186 Msa0129550:five_prime_UTR 35.0%
!! TCATAGGTTTTGTACTCATC+TGG + chr1_3:59533301-59533320 None:intergenic 35.0%
TACAAAACCTATGAGAAAGC+TGG - chr1_3:59533307-59533326 Msa0129550:five_prime_UTR 35.0%
TTAAACACCAGCTTTCTCAT+AGG + chr1_3:59533317-59533336 None:intergenic 35.0%
ATGAAAGCTCCAAAAGGAAA+GGG + chr1_3:59533598-59533617 None:intergenic 35.0%
AATGAAAGCTCCAAAAGGAA+AGG + chr1_3:59533599-59533618 None:intergenic 35.0%
TTCTTGTCTTCATTCTCTTG+TGG - chr1_3:59533715-59533734 Msa0129550:five_prime_UTR 35.0%
TCTTGTCTTCATTCTCTTGT+GGG - chr1_3:59533716-59533735 Msa0129550:five_prime_UTR 35.0%
! TTCTGAATCTGAAACTTGGA+CGG - chr1_3:59533775-59533794 Msa0129550:five_prime_UTR 35.0%
AGTAATTTCAGGGGGTTTAA+TGG + chr1_3:59534581-59534600 None:intergenic 35.0%
CACAACAAAGTAATTTCAGG+GGG + chr1_3:59534589-59534608 None:intergenic 35.0%
!! CTTGTTTTCTTGGCTTTCAT+TGG + chr1_3:59534739-59534758 None:intergenic 35.0%
ACTTAATGTGCACTTGTACA+TGG - chr1_3:59535038-59535057 Msa0129550:five_prime_UTR 35.0%
AAGTCACAGCACAATTAAGA+TGG + chr1_3:59535121-59535140 None:intergenic 35.0%
TTAATTGTGCTGTGACTTCT+TGG - chr1_3:59535123-59535142 Msa0129550:five_prime_UTR 35.0%
!!! CTTTGTTTTGTTATCAGTGG+AGG - chr1_3:59535204-59535223 Msa0129550:five_prime_UTR 35.0%
TGTTGCAACAATCAATACCT+TGG + chr1_3:59535236-59535255 None:intergenic 35.0%
TGATTGTTGCAACAATAGCA+TGG - chr1_3:59535242-59535261 Msa0129550:five_prime_UTR 35.0%
GATTGTTGCAACAATAGCAT+GGG - chr1_3:59535243-59535262 Msa0129550:five_prime_UTR 35.0%
ATTGTTGCAACAATAGCATG+GGG - chr1_3:59535244-59535263 Msa0129550:five_prime_UTR 35.0%
CAATGTAAATGACCAAGGAA+GGG + chr1_3:59535368-59535387 None:intergenic 35.0%
TCAATGTAAATGACCAAGGA+AGG + chr1_3:59535369-59535388 None:intergenic 35.0%
GGATTCAATGTAAATGACCA+AGG + chr1_3:59535373-59535392 None:intergenic 35.0%
TCGATGGGTCAAAATAATCA+AGG + chr1_3:59535427-59535446 None:intergenic 35.0%
TATCAGCAGAAAGTTAAGAC+AGG - chr1_3:59535556-59535575 Msa0129550:five_prime_UTR 35.0%
TTGTTAGCTAACAAATGGGA+AGG + chr1_3:59535859-59535878 None:intergenic 35.0%
! TTCCCATTTGTTAGCTAACA+AGG - chr1_3:59535858-59535877 Msa0129550:five_prime_UTR 35.0%
TAAATCCAATAGGAGGACTA+GGG + chr1_3:59536044-59536063 None:intergenic 35.0%
AAGATGCTAAATCCAATAGG+AGG + chr1_3:59536051-59536070 None:intergenic 35.0%
! AGTTTCATCACTGTTTCTCA+CGG + chr1_3:59536124-59536143 None:intergenic 35.0%
AATTCCTACTATTCATCTCC+TGG + chr1_3:59536303-59536322 None:intergenic 35.0%
ACATCAATTCCTCAAAAGCA+AGG - chr1_3:59536345-59536364 Msa0129550:intron 35.0%
GAAATTGTGTAACAGCTTAC+AGG + chr1_3:59536476-59536495 None:intergenic 35.0%
TTTCACTATCTTATCGACGA+TGG - chr1_3:59536554-59536573 Msa0129550:intron 35.0%
!! GCCGAATTGATAGTTCTTTT+TGG - chr1_3:59536612-59536631 Msa0129550:intron 35.0%
TCTCAAATTATTAGCGGTGT+CGG - chr1_3:59536789-59536808 Msa0129550:intron 35.0%
ATACTTAGTTTCGCTAGACA+TGG + chr1_3:59536844-59536863 None:intergenic 35.0%
!!! TTTTGAAGCTGCTATCTTGT+TGG - chr1_3:59536879-59536898 Msa0129550:five_prime_UTR 35.0%
CACATGATCGGTATATAGAT+AGG + chr1_3:59536985-59537004 None:intergenic 35.0%
CTATCTATATACCGATCATG+TGG - chr1_3:59536983-59537002 Msa0129550:five_prime_UTR 35.0%
AGAGAACAAAAAGACAGCTT+TGG - chr1_3:59537122-59537141 Msa0129550:intron 35.0%
TGCAACTTTATAGCTATGAG+AGG - chr1_3:59537320-59537339 Msa0129550:five_prime_UTR 35.0%
AACTTTATAGCTATGAGAGG+AGG - chr1_3:59537323-59537342 Msa0129550:five_prime_UTR 35.0%
TTATCAAGCGATTGCTTATC+TGG - chr1_3:59537404-59537423 Msa0129550:five_prime_UTR 35.0%
AAGCAACAAACAAGATCTTC+TGG + chr1_3:59537435-59537454 None:intergenic 35.0%
! AAGAAACCAAATGCACTGAT+CGG + chr1_3:59537478-59537497 None:intergenic 35.0%
! CTCTGATGTTTCTCTCATTT+TGG - chr1_3:59537651-59537670 Msa0129550:five_prime_UTR 35.0%
ATACAATGTATTCCGTTGGT+TGG - chr1_3:59537759-59537778 Msa0129550:intron 35.0%
TTTAAGCAAAGAAAAGTGGG+AGG - chr1_3:59537801-59537820 Msa0129550:intron 35.0%
TCTTCTGTGGGAAAAAACAA+AGG + chr1_3:59537835-59537854 None:intergenic 35.0%
!! AACAGCGGAAAGTATTCATT+CGG - chr1_3:59538009-59538028 Msa0129550:intron 35.0%
! AGTATTCATTCGGGTTTATC+TGG - chr1_3:59538019-59538038 Msa0129550:intron 35.0%
! GTATTCATTCGGGTTTATCT+GGG - chr1_3:59538020-59538039 Msa0129550:intron 35.0%
! TATTCATTCGGGTTTATCTG+GGG - chr1_3:59538021-59538040 Msa0129550:intron 35.0%
GTTGTTAAATGCACTATCCA+TGG - chr1_3:59538218-59538237 Msa0129550:intron 35.0%
AAGCAGTGCAATATATACCA+TGG + chr1_3:59538238-59538257 None:intergenic 35.0%
CTGCTTGTATTCTTCTGAAT+CGG - chr1_3:59538259-59538278 Msa0129550:intron 35.0%
! TCCTGGAATATTTTGTCATC+TGG - chr1_3:59538337-59538356 Msa0129550:intron 35.0%
TCCAGATGACAAAATATTCC+AGG + chr1_3:59538341-59538360 None:intergenic 35.0%
! GGAATATTTTGTCATCTGGA+AGG - chr1_3:59538341-59538360 Msa0129550:intron 35.0%
TCCATTATTGTGAGAAATGC+TGG - chr1_3:59538439-59538458 Msa0129550:intron 35.0%
TATAACAGAGAAGGACAAGA+GGG + chr1_3:59538475-59538494 None:intergenic 35.0%
TTATAACAGAGAAGGACAAG+AGG + chr1_3:59538476-59538495 None:intergenic 35.0%
TTTCAGGGTTATAACAGAGA+AGG + chr1_3:59538484-59538503 None:intergenic 35.0%
! AAGAGCATGGAATTCTTTCA+GGG + chr1_3:59538499-59538518 None:intergenic 35.0%
!!! TGCCTTATTTTTGGCTCTAA+TGG - chr1_3:59538518-59538537 Msa0129550:intron 35.0%
TTAAGGGGCCAATAATGTTT+AGG + chr1_3:59538581-59538600 None:intergenic 35.0%
!!! GTTGTCTTTGTTTTCCTCTT+TGG - chr1_3:59538626-59538645 Msa0129550:intron 35.0%
! TTGCTTATATTTAAGACCGG+AGG + chr1_3:59538757-59538776 None:intergenic 35.0%
GAAAAGGCAGTGAAACAATT+AGG + chr1_3:59538864-59538883 None:intergenic 35.0%
CTCATATTAATACTGGTGAC+CGG - chr1_3:59539131-59539150 Msa0129550:intron 35.0%
GAGTATGATATTCTGCATCT+TGG - chr1_3:59539161-59539180 Msa0129550:intron 35.0%
GAAACCAATCATCTCAAAGA+TGG + chr1_3:59539360-59539379 None:intergenic 35.0%
CACATAATCAAACTCTTGAG+AGG + chr1_3:59539477-59539496 None:intergenic 35.0%
ACAACAAATTCGTGAAAGTG+AGG - chr1_3:59539577-59539596 Msa0129550:intron 35.0%
AAATCCATCAATGCCATTAG+TGG + chr1_3:59539690-59539709 None:intergenic 35.0%
! AAAACCTGGTCTTCTTTATC+AGG + chr1_3:59539782-59539801 None:intergenic 35.0%
! TGATAAAGAAGACCAGGTTT+TGG - chr1_3:59539781-59539800 Msa0129550:intron 35.0%
! GATAAAGAAGACCAGGTTTT+GGG - chr1_3:59539782-59539801 Msa0129550:intron 35.0%
! ATAAAGAAGACCAGGTTTTG+GGG - chr1_3:59539783-59539802 Msa0129550:intron 35.0%
ATGATTCGTGTGATTCAGTT+GGG + chr1_3:59539844-59539863 None:intergenic 35.0%
TTTGAGTACTCCTCTGTTAA+TGG + chr1_3:59539890-59539909 None:intergenic 35.0%
GAGCTTTCTGAATATTTCAC+AGG - chr1_3:59540099-59540118 Msa0129550:intron 35.0%
!! GAACTTCAGTTTGCTATCAA+TGG - chr1_3:59540351-59540370 Msa0129550:intron 35.0%
TTGCTATCAATGGTGTATCT+TGG - chr1_3:59540361-59540380 Msa0129550:intron 35.0%
TAACCCAGAAGATGTAACTT+GGG + chr1_3:59540423-59540442 None:intergenic 35.0%
ATAACCCAGAAGATGTAACT+TGG + chr1_3:59540424-59540443 None:intergenic 35.0%
CGTTATGGAACTTTGAATGA+GGG + chr1_3:59540623-59540642 None:intergenic 35.0%
!! CTACCGACTTCAAATTTAAG+AGG - chr1_3:59540668-59540687 Msa0129550:intron 35.0%
! TAGTGGGATTATCTTTTGTG+TGG + chr1_3:59540702-59540721 None:intergenic 35.0%
ATAATCCCACTAGTTATAGC+TGG - chr1_3:59540710-59540729 Msa0129550:intron 35.0%
GACACTTGAACAAAATAAGG+AGG + chr1_3:59540840-59540859 None:intergenic 35.0%
TATCCACAATGATAAGTGCA+AGG - chr1_3:59540938-59540957 Msa0129550:intron 35.0%
TTTCCTTGCACTTATCATTG+TGG + chr1_3:59540944-59540963 None:intergenic 35.0%
GCTGAAGAACAATCAGTTAA+AGG + chr1_3:59541077-59541096 None:intergenic 35.0%
CGTATTCTTTCTGTAATTGG+TGG - chr1_3:59541194-59541213 Msa0129550:five_prime_UTR 35.0%
ATTCTTTCTGTAATTGGTGG+AGG - chr1_3:59541197-59541216 Msa0129550:five_prime_UTR 35.0%
! TATCCTTTTGTTCTTTCGAC+AGG - chr1_3:59541410-59541429 Msa0129550:five_prime_UTR 35.0%
TAGCAAAAAGGAAGATGCAT+GGG + chr1_3:59541743-59541762 None:intergenic 35.0%
ATAGCAAAAAGGAAGATGCA+TGG + chr1_3:59541744-59541763 None:intergenic 35.0%
TAATTTCAACCTTGAGTGCA+AGG + chr1_3:59541867-59541886 None:intergenic 35.0%
TTGCACTCAAGGTTGAAATT+AGG - chr1_3:59541866-59541885 Msa0129550:intron 35.0%
AAATGAGCAAGAAGGTGAAA+AGG + chr1_3:59541927-59541946 None:intergenic 35.0%
ATAGCTGAAAATGAGCAAGA+AGG + chr1_3:59541935-59541954 None:intergenic 35.0%
GTTAAACGACACATGATTGA+AGG - chr1_3:59541973-59541992 Msa0129550:intron 35.0%
! GTCTAATTGGCTTATAGTCT+TGG - chr1_3:59542190-59542209 Msa0129550:intron 35.0%
AATCTTAAAACAAGGGGGAA+GGG + chr1_3:59542273-59542292 None:intergenic 35.0%
AAATCTTAAAACAAGGGGGA+AGG + chr1_3:59542274-59542293 None:intergenic 35.0%
!! TGTATTGATGGAGTTCTAGA+GGG + chr1_3:59542371-59542390 None:intergenic 35.0%
! TTGTATTGATGGAGTTCTAG+AGG + chr1_3:59542372-59542391 None:intergenic 35.0%
ACTCCATCAATACAATGTGA+TGG - chr1_3:59542377-59542396 Msa0129550:intron 35.0%
CTCCATCAATACAATGTGAT+GGG - chr1_3:59542378-59542397 Msa0129550:intron 35.0%
ATCCCATCACATTGTATTGA+TGG + chr1_3:59542383-59542402 None:intergenic 35.0%
! ATCAATACAATGTGATGGGA+TGG - chr1_3:59542382-59542401 Msa0129550:intron 35.0%
TGGCATGCTTAAGAAACATT+TGG - chr1_3:59542702-59542721 Msa0129550:intron 35.0%
CTCTTTGATTAATGCAGTGT+TGG - chr1_3:59542733-59542752 Msa0129550:intron 35.0%
TACAGAGTATGATTGGCAAT+TGG - chr1_3:59542958-59542977 Msa0129550:intron 35.0%
CTTTAGCAAGAAATATGGCA+CGG + chr1_3:59543018-59543037 None:intergenic 35.0%
TCTTGTTAGGAATGCCATAT+CGG + chr1_3:59543072-59543091 None:intergenic 35.0%
GTTTCACGAATCAACTACTT+AGG - chr1_3:59543124-59543143 Msa0129550:intron 35.0%
GTACGCATCGTAATTCATAA+AGG + chr1_3:59543177-59543196 None:intergenic 35.0%
!! CAAAAAAGAGTGTCGAATGA+TGG + chr1_3:59543307-59543326 None:intergenic 35.0%
!!! CATCATTCGACACTCTTTTT+TGG - chr1_3:59543305-59543324 Msa0129550:intron 35.0%
! TAGAGGTACAAATACATACG+GGG + chr1_3:59543658-59543677 None:intergenic 35.0%
! CTAGAGGTACAAATACATAC+GGG + chr1_3:59543659-59543678 None:intergenic 35.0%
! GCTAGAGGTACAAATACATA+CGG + chr1_3:59543660-59543679 None:intergenic 35.0%
!! TACCTCTAGCTTTGAAATGA+TGG - chr1_3:59543670-59543689 Msa0129550:intron 35.0%
AACCATCATTTCAAAGCTAG+AGG + chr1_3:59543675-59543694 None:intergenic 35.0%
AAAATTATTCAACGGCGGAA+AGG + chr1_3:59543719-59543738 None:intergenic 35.0%
CAGTGTAGACTTTCTTATGA+AGG - chr1_3:59543812-59543831 Msa0129550:intron 35.0%
! TCCCTCCTTCAATTTGAAAT+AGG + chr1_3:59543873-59543892 None:intergenic 35.0%
! AATAATGGCACCGTTTGTTT+TGG + chr1_3:59544305-59544324 None:intergenic 35.0%
TACTAGCATAATCAAACGCA+TGG - chr1_3:59544355-59544374 Msa0129550:intron 35.0%
ACTAGCATAATCAAACGCAT+GGG - chr1_3:59544356-59544375 Msa0129550:intron 35.0%
CATAAGGTGCATTTGGTAAA+CGG + chr1_3:59544590-59544609 None:intergenic 35.0%
AGAATGACATAAGGTGCATT+TGG + chr1_3:59544597-59544616 None:intergenic 35.0%
AGCACCTGTGAAAATTCATT+TGG - chr1_3:59544769-59544788 Msa0129550:five_prime_UTR 35.0%
TGTCCTCAAGCTATCAAAAT+GGG + chr1_3:59544878-59544897 None:intergenic 35.0%
ATGTCCTCAAGCTATCAAAA+TGG + chr1_3:59544879-59544898 None:intergenic 35.0%
AGACTGAATCACATTTGACA+AGG + chr1_3:59544917-59544936 None:intergenic 35.0%
AAAATGACCAAATGCTGCAA+CGG - chr1_3:59544975-59544994 Msa0129550:five_prime_UTR 35.0%
!!! TGTCATTTTCTTACCAGCAT+TGG + chr1_3:59545041-59545060 None:intergenic 35.0%
ACACAAATCCAAGGTCTATT+AGG + chr1_3:59545289-59545308 None:intergenic 35.0%
ACCCTATGATTTGATACTTG+AGG - chr1_3:59545313-59545332 Msa0129550:intron 35.0%
TTGATTTCGACTGATATCTC+TGG - chr1_3:59545351-59545370 Msa0129550:intron 35.0%
GAATGCTGTTGTAACAACAT+AGG + chr1_3:59545425-59545444 None:intergenic 35.0%
TAAATACATTCAACTTCGGG+GGG + chr1_3:59545722-59545741 None:intergenic 35.0%
AAGTACGTGAACAATTGAAG+GGG + chr1_3:59545746-59545765 None:intergenic 35.0%
CAAGTACGTGAACAATTGAA+GGG + chr1_3:59545747-59545766 None:intergenic 35.0%
TCAAGTACGTGAACAATTGA+AGG + chr1_3:59545748-59545767 None:intergenic 35.0%
TTATATGCTATTGTGGTGAC+TGG + chr1_3:59545784-59545803 None:intergenic 35.0%
GAAAGCTAGCATCTTTAATG+GGG + chr1_3:59545883-59545902 None:intergenic 35.0%
CTGAAAGCTAGCATCTTTAA+TGG + chr1_3:59545885-59545904 None:intergenic 35.0%
ATTGATATCAAGACAGAGAG+TGG - chr1_3:59545905-59545924 Msa0129550:intron 35.0%
TTCTTTCACACAGAGTAGTT+TGG + chr1_3:59545946-59545965 None:intergenic 35.0%
AAGCTGATGCTAGTACATTA+TGG - chr1_3:59546059-59546078 Msa0129550:intron 35.0%
CATGTCAGAATACCATTCAA+GGG + chr1_3:59546122-59546141 None:intergenic 35.0%
! TTTTCACCTGGATACTTTCA+AGG - chr1_3:59546149-59546168 Msa0129550:intron 35.0%
TTTCACCTGGATACTTTCAA+GGG - chr1_3:59546150-59546169 Msa0129550:intron 35.0%
! TTCACAACTTCTTTCCCTTT+TGG + chr1_3:59546181-59546200 None:intergenic 35.0%
! TTTTGAACATCAGACTGTGT+TGG + chr1_3:59546235-59546254 None:intergenic 35.0%
ATATTGCCATATTGCTTCAG+AGG - chr1_3:59546674-59546693 Msa0129550:intron 35.0%
TATTGCCATATTGCTTCAGA+GGG - chr1_3:59546675-59546694 Msa0129550:intron 35.0%
! ATAACCTTTGTTCTAGCTGT+TGG - chr1_3:59546744-59546763 Msa0129550:intron 35.0%
!!! TCATTTGCATGGCTTTTTTC+TGG + chr1_3:59546859-59546878 None:intergenic 35.0%
CTTATTTAAGAGACATCCTG+TGG - chr1_3:59546958-59546977 Msa0129550:intron 35.0%
TATATACAATGCAAGAGCTG+AGG - chr1_3:59547040-59547059 Msa0129550:intron 35.0%
ATATACAATGCAAGAGCTGA+GGG - chr1_3:59547041-59547060 Msa0129550:intron 35.0%
!! CCTAACGTTTTAATCAGGTT+TGG + chr1_3:59547144-59547163 None:intergenic 35.0%
CCAAACCTGATTAAAACGTT+AGG - chr1_3:59547141-59547160 Msa0129550:five_prime_UTR 35.0%
CTTCTGGTCATAAATGTTAC+TGG - chr1_3:59547177-59547196 Msa0129550:five_prime_UTR 35.0%
GCTGGTATAAACTTCTTATG+CGG + chr1_3:59547283-59547302 None:intergenic 35.0%
CGATTGCTTGATTACAACTA+TGG + chr1_3:59547473-59547492 None:intergenic 35.0%
TAAGAGAAAATCACACTTCC+TGG + chr1_3:59547518-59547537 None:intergenic 35.0%
! TGATTGAAAGGTGTGAGAAA+TGG + chr1_3:59547541-59547560 None:intergenic 35.0%
!! ATCGCTGTTTTGTGATTGAA+AGG + chr1_3:59547553-59547572 None:intergenic 35.0%
TACGTTTGTCTTCACCAACA+AGG + chr1_3:59525496-59525515 None:intergenic 40.0%
!! ATCACGAAGAAAGCACTTTC+CGG + chr1_3:59525806-59525825 None:intergenic 40.0%
TGCTGCTACCGAAAATTCAA+TGG - chr1_3:59525877-59525896 Msa0129550:CDS 40.0%
GCTGCTACCGAAAATTCAAT+GGG - chr1_3:59525878-59525897 Msa0129550:CDS 40.0%
TCACAGATAGCAGAAAACAC+CGG + chr1_3:59526465-59526484 None:intergenic 40.0%
TAGATTGTGAGCCAAAGAAG+TGG - chr1_3:59527044-59527063 Msa0129550:CDS 40.0%
CAATCAAAACGCCACTTCTT+TGG + chr1_3:59527058-59527077 None:intergenic 40.0%
TTCATTTCGTGACCAAGATC+AGG - chr1_3:59527443-59527462 Msa0129550:intron 40.0%
GATAATGAGCCTTGCATGAT+AGG - chr1_3:59527520-59527539 Msa0129550:intron 40.0%
ATCATCAAGCTTCTTCGTGA+TGG - chr1_3:59527564-59527583 Msa0129550:intron 40.0%
!! GAGAGATTGGCCTTAAGAAA+AGG - chr1_3:59527622-59527641 Msa0129550:intron 40.0%
TTTCTATTTGAAGGAGGGCT+TGG - chr1_3:59527712-59527731 Msa0129550:intron 40.0%
TAGGATTTCATTTCCGAAGG+AGG - chr1_3:59527884-59527903 Msa0129550:intron 40.0%
ATAGCAACAACAACCTCCTT+CGG + chr1_3:59527900-59527919 None:intergenic 40.0%
ACTCTCTCAAGTGACTTATC+TGG - chr1_3:59527951-59527970 Msa0129550:CDS 40.0%
AAGTCACAGAAGATCAAACC+AGG + chr1_3:59528748-59528767 None:intergenic 40.0%
TTAGGAAGTCAACTGCAGAA+TGG + chr1_3:59528780-59528799 None:intergenic 40.0%
ACGTCAAAAGAAAGGATGAC+AGG + chr1_3:59528889-59528908 None:intergenic 40.0%
! TTGAGAGCACGTCAAAAGAA+AGG + chr1_3:59528897-59528916 None:intergenic 40.0%
GCAACGAATGACAATAGTTG+CGG + chr1_3:59528938-59528957 None:intergenic 40.0%
TTGTTAGCAGTGAGCTTTCA+TGG + chr1_3:59529016-59529035 None:intergenic 40.0%
AGTCACACATATAGGTGCAT+GGG + chr1_3:59529043-59529062 None:intergenic 40.0%
TAGTCACACATATAGGTGCA+TGG + chr1_3:59529044-59529063 None:intergenic 40.0%
TTAAAGAGTTTCCGGAACGA+TGG + chr1_3:59529104-59529123 None:intergenic 40.0%
ATCGTTCCGGAAACTCTTTA+AGG - chr1_3:59529103-59529122 Msa0129550:intron 40.0%
ACTTCGCCTTAAAGAGTTTC+CGG + chr1_3:59529112-59529131 None:intergenic 40.0%
AATGCTAAGCTAGAACTACC+GGG + chr1_3:59529146-59529165 None:intergenic 40.0%
! AAATGCATCTGGAACGAAGA+CGG + chr1_3:59529190-59529209 None:intergenic 40.0%
! TGGTTTGAAGCTTCCAGATA+TGG - chr1_3:59529283-59529302 Msa0129550:intron 40.0%
ATCTGGCTAAGCCATCTTTA+TGG - chr1_3:59529381-59529400 Msa0129550:intron 40.0%
!! ACAAGTCGGTTTTGTAAGGT+AGG + chr1_3:59529472-59529491 None:intergenic 40.0%
!! AAAACCGACTTGTCAGGTTA+GGG - chr1_3:59529479-59529498 Msa0129550:intron 40.0%
GGACTCTTAACAAGCATGAT+GGG + chr1_3:59529576-59529595 None:intergenic 40.0%
!!! ACCTCACAAGCTAGTTTTGT+GGG - chr1_3:59529646-59529665 Msa0129550:intron 40.0%
!!! TAGTTTTGTGGGGTTGTGTT+AGG - chr1_3:59529657-59529676 Msa0129550:intron 40.0%
CACGATCAAGAATTTGTGGT+TGG + chr1_3:59529684-59529703 None:intergenic 40.0%
CTGACACGATCAAGAATTTG+TGG + chr1_3:59529688-59529707 None:intergenic 40.0%
AATAGCAGAAACCTGATAGC+AGG + chr1_3:59529737-59529756 None:intergenic 40.0%
GCTATCAGGTTTCTGCTATT+AGG - chr1_3:59529737-59529756 Msa0129550:intron 40.0%
GGTGCATGGATATAAATGGT+GGG + chr1_3:59529766-59529785 None:intergenic 40.0%
TGGTGCATGGATATAAATGG+TGG + chr1_3:59529767-59529786 None:intergenic 40.0%
!! GCTTGGTGCATGGATATAAA+TGG + chr1_3:59529770-59529789 None:intergenic 40.0%
! TTGGGTTTTTCCCAATAGTG+AGG + chr1_3:59529877-59529896 None:intergenic 40.0%
! GAGTCTTATCTATCCGATGT+GGG + chr1_3:59529902-59529921 None:intergenic 40.0%
! AGAGTCTTATCTATCCGATG+TGG + chr1_3:59529903-59529922 None:intergenic 40.0%
TAGGCCCCTAAATTTCAACA+TGG - chr1_3:59529985-59530004 Msa0129550:CDS 40.0%
ATCAGAGCTTGTCGAATTCA+AGG - chr1_3:59530009-59530028 Msa0129550:CDS 40.0%
TCAGAGCTTGTCGAATTCAA+GGG - chr1_3:59530010-59530029 Msa0129550:CDS 40.0%
! GAGTCTTATCTATCCGATGT+GGG + chr1_3:59529902-59529921 None:intergenic 40.0%
! AGAGTCTTATCTATCCGATG+TGG + chr1_3:59529903-59529922 None:intergenic 40.0%
CGTTCTTAGAATTCGTGGTT+GGG + chr1_3:59530251-59530270 None:intergenic 40.0%
AAAACCGCCTTGTAAGGTAA+GGG - chr1_3:59530376-59530395 Msa0129550:intron 40.0%
AAAACCAGCTTGTAAGGTGA+GGG + chr1_3:59530508-59530527 None:intergenic 40.0%
! AGATGTCCATTCTTGAGTTG+AGG - chr1_3:59530621-59530640 Msa0129550:intron 40.0%
!! GATGTCCATTCTTGAGTTGA+GGG - chr1_3:59530622-59530641 Msa0129550:intron 40.0%
!! TTTTAGGAACCCACTAGCAA+GGG - chr1_3:59530711-59530730 Msa0129550:intron 40.0%
ATGTCACTACGGAAAACCAT+TGG + chr1_3:59530808-59530827 None:intergenic 40.0%
AACCTCAAAAGCTAGCTCAT+GGG - chr1_3:59530877-59530896 Msa0129550:intron 40.0%
TTCACTGTGCTAGGTTTGAA+GGG + chr1_3:59530973-59530992 None:intergenic 40.0%
CATATTTCCTTCACTGTGCT+AGG + chr1_3:59530982-59531001 None:intergenic 40.0%
CTAGCACAGTGAAGGAAATA+TGG - chr1_3:59530980-59530999 Msa0129550:intron 40.0%
GGCACGTAAGATCAAATCTA+AGG - chr1_3:59531025-59531044 Msa0129550:intron 40.0%
TTGGAATTAGCCATCCTTCA+TGG - chr1_3:59531500-59531519 Msa0129550:intron 40.0%
TGGAATTAGCCATCCTTCAT+GGG - chr1_3:59531501-59531520 Msa0129550:intron 40.0%
!!! GCCTCACTACCTTTTTTCAT+TGG - chr1_3:59531523-59531542 Msa0129550:intron 40.0%
GAGATGATGAATGAGCATGA+AGG + chr1_3:59531626-59531645 None:intergenic 40.0%
TGGGCTTATGTCTGTGTATA+TGG - chr1_3:59531681-59531700 Msa0129550:CDS 40.0%
!! GTATATGGTTCTAAAGGTGG+TGG - chr1_3:59531696-59531715 Msa0129550:CDS 40.0%
ATCATACTCGGATATTCCAC+AGG + chr1_3:59531779-59531798 None:intergenic 40.0%
GTGGAATATCCGAGTATGAT+TGG - chr1_3:59531779-59531798 Msa0129550:CDS 40.0%
GCAATCCAACCAATCATACT+CGG + chr1_3:59531791-59531810 None:intergenic 40.0%
!! GGTTGGATTGCTGACTTAAT+TGG - chr1_3:59531800-59531819 Msa0129550:CDS 40.0%
AAATATCCGCGAATACTGAG+TGG - chr1_3:59531831-59531850 Msa0129550:CDS 40.0%
GCACAAGTGAAGACCAATAA+AGG + chr1_3:59532060-59532079 None:intergenic 40.0%
TAAATCTGATCTGGAGGAGA+TGG - chr1_3:59532153-59532172 Msa0129550:CDS 40.0%
AAATCTGATCTGGAGGAGAT+GGG - chr1_3:59532154-59532173 Msa0129550:CDS 40.0%
AAGCTAGTGGGATATCTACA+TGG - chr1_3:59532311-59532330 Msa0129550:five_prime_UTR 40.0%
GACTACCTACCACCTAATTA+AGG + chr1_3:59532517-59532536 None:intergenic 40.0%
! ACCTTACTAAGGAAGTACGA+GGG + chr1_3:59532632-59532651 None:intergenic 40.0%
TACTTCCTTAGTAAGGTGGT+AGG - chr1_3:59532635-59532654 Msa0129550:five_prime_UTR 40.0%
GAATACCTACCACCTTACTA+AGG + chr1_3:59532643-59532662 None:intergenic 40.0%
CAGATCTGCACAGAAAATTC+AGG + chr1_3:59532983-59533002 None:intergenic 40.0%
! CTGAATTTTCTGTGCAGATC+TGG - chr1_3:59532981-59533000 Msa0129550:five_prime_UTR 40.0%
!! CTTTTTCACGTATGGTTTCC+CGG - chr1_3:59533061-59533080 Msa0129550:five_prime_UTR 40.0%
AAAGGAAGGACTGTGACAAA+AGG + chr1_3:59533163-59533182 None:intergenic 40.0%
GTCACAGTCCTTCCTTTATT+TGG - chr1_3:59533166-59533185 Msa0129550:five_prime_UTR 40.0%
CAATGTGCCCAAATAAAGGA+AGG + chr1_3:59533177-59533196 None:intergenic 40.0%
CATGCAATGTGCCCAAATAA+AGG + chr1_3:59533181-59533200 None:intergenic 40.0%
ATTTGGGCACATTGCATGTT+TGG - chr1_3:59533183-59533202 Msa0129550:five_prime_UTR 40.0%
GTAAATAAAGAGAACGAGGG+AGG - chr1_3:59533490-59533509 Msa0129550:five_prime_UTR 40.0%
! AGGAAGGGTTGTTTGAAGTA+GGG - chr1_3:59533510-59533529 Msa0129550:five_prime_UTR 40.0%
TGCGAAATGAAAGCTCCAAA+AGG + chr1_3:59533604-59533623 None:intergenic 40.0%
TTCGCAAGCTTATGTGCATT+TGG - chr1_3:59533618-59533637 Msa0129550:five_prime_UTR 40.0%
TCGCAAGCTTATGTGCATTT+GGG - chr1_3:59533619-59533638 Msa0129550:five_prime_UTR 40.0%
AGAGAATGAAGACAAGAAGC+AGG + chr1_3:59533713-59533732 None:intergenic 40.0%
! TCTGAATCTGAAACTTGGAC+GGG - chr1_3:59533776-59533795 Msa0129550:five_prime_UTR 40.0%
ATGAAAATCTGGGAGATGGT+GGG - chr1_3:59533885-59533904 Msa0129550:five_prime_UTR 40.0%
TGCGCAAGCAAAAAAAATCC+AGG + chr1_3:59533930-59533949 None:intergenic 40.0%
! TTGCTTGCGCAATTTTGTCT+TGG - chr1_3:59533939-59533958 Msa0129550:five_prime_UTR 40.0%
!! TCTTGGAATTTTGGTGGCAT+TGG - chr1_3:59533956-59533975 Msa0129550:five_prime_UTR 40.0%
!! CTTGGAATTTTGGTGGCATT+GGG - chr1_3:59533957-59533976 Msa0129550:five_prime_UTR 40.0%
!! GAGTTTTCGAGAAACAGGTA+TGG + chr1_3:59534072-59534091 None:intergenic 40.0%
GAGCAAACATATTCGTTTGC+TGG + chr1_3:59534216-59534235 None:intergenic 40.0%
AACGAATATGTTTGCTCACG+AGG - chr1_3:59534219-59534238 Msa0129550:intron 40.0%
ACGAATATGTTTGCTCACGA+GGG - chr1_3:59534220-59534239 Msa0129550:intron 40.0%
ACAATGCGTTAACCTCAACT+TGG - chr1_3:59534284-59534303 Msa0129550:intron 40.0%
! AAAAAGCTTTGATCTGGGTC+TGG - chr1_3:59534395-59534414 Msa0129550:intron 40.0%
! AAAAGCTTTGATCTGGGTCT+GGG - chr1_3:59534396-59534415 Msa0129550:intron 40.0%
!!! TCTCTGGGATTTTTATGGCT+TGG - chr1_3:59534419-59534438 Msa0129550:intron 40.0%
!!! CTCTGGGATTTTTATGGCTT+GGG - chr1_3:59534420-59534439 Msa0129550:intron 40.0%
! TACTTTGTTGTGTTGGTACC+AGG - chr1_3:59534597-59534616 Msa0129550:five_prime_UTR 40.0%
TCAGGTTTGAACTTAAGCAG+TGG + chr1_3:59534640-59534659 None:intergenic 40.0%
TGCTTAAGTTCAAACCTGAC+TGG - chr1_3:59534641-59534660 Msa0129550:five_prime_UTR 40.0%
GGGTAGTATACAGTCTATCT+AGG + chr1_3:59534861-59534880 None:intergenic 40.0%
! TTAGGGTATCATATTTGGGG+AGG - chr1_3:59534920-59534939 Msa0129550:five_prime_UTR 40.0%
! TAGGGTATCATATTTGGGGA+GGG - chr1_3:59534921-59534940 Msa0129550:five_prime_UTR 40.0%
TATACAGCATGGATGAAACC+AGG + chr1_3:59535328-59535347 None:intergenic 40.0%
TGTTTCATCAAACCCTTCCT+TGG - chr1_3:59535353-59535372 Msa0129550:five_prime_UTR 40.0%
TTAACTTTCTGCTGATACCG+TGG + chr1_3:59535553-59535572 None:intergenic 40.0%
TCTTCTGCATTGGAGAAGAA+AGG - chr1_3:59535641-59535660 Msa0129550:five_prime_UTR 40.0%
! AGGTATGAGATGGATTTAGC+TGG - chr1_3:59535694-59535713 Msa0129550:five_prime_UTR 40.0%
AATGGGAAGGAATACCGATA+TGG + chr1_3:59535846-59535865 None:intergenic 40.0%
! TGCTACTTCCAAAAAATCCC+AGG + chr1_3:59535944-59535963 None:intergenic 40.0%
AAATCCAATAGGAGGACTAG+GGG + chr1_3:59536043-59536062 None:intergenic 40.0%
CTAAATCCAATAGGAGGACT+AGG + chr1_3:59536045-59536064 None:intergenic 40.0%
GATTTAGCATCTTGAAGGCT+GGG - chr1_3:59536058-59536077 Msa0129550:intron 40.0%
AATTCCTCAAAAGCAAGGTG+TGG - chr1_3:59536350-59536369 Msa0129550:intron 40.0%
ATTCCTCAAAAGCAAGGTGT+GGG - chr1_3:59536351-59536370 Msa0129550:intron 40.0%
! AACAGGCAATTGGCTTAGAA+GGG + chr1_3:59536412-59536431 None:intergenic 40.0%
CTTTATCTTGACGAAATGGG+CGG - chr1_3:59536498-59536517 Msa0129550:intron 40.0%
! TTTTAAGCACTCCTCGGATT+AGG - chr1_3:59536702-59536721 Msa0129550:intron 40.0%
AATTGTCAGGAAAGCGATGT+AGG + chr1_3:59537011-59537030 None:intergenic 40.0%
ACATATTCCTTCTCCTTCTG+TGG - chr1_3:59537077-59537096 Msa0129550:intron 40.0%
CTATAATCCACAGAAGGAGA+AGG + chr1_3:59537087-59537106 None:intergenic 40.0%
! CTTCTCCTTCTGTGGATTAT+AGG - chr1_3:59537085-59537104 Msa0129550:intron 40.0%
GTCTACCTATAATCCACAGA+AGG + chr1_3:59537093-59537112 None:intergenic 40.0%
TTCTGGACAAATACATCTCG+AGG + chr1_3:59537213-59537232 None:intergenic 40.0%
ACAGGTTTACTTGGATCAGT+TGG - chr1_3:59537363-59537382 Msa0129550:five_prime_UTR 40.0%
AATCGCTTGATAAACCCAAG+TGG + chr1_3:59537397-59537416 None:intergenic 40.0%
! AGAAACCAAATGCACTGATC+GGG + chr1_3:59537477-59537496 None:intergenic 40.0%
! GATGGGATACTGGAAGTTTT+TGG + chr1_3:59537535-59537554 None:intergenic 40.0%
GAAAGATTTGGATGGGATAC+TGG + chr1_3:59537545-59537564 None:intergenic 40.0%
CCACATCTGGAAAAGATACT+CGG + chr1_3:59537596-59537615 None:intergenic 40.0%
! CGAGTATCTTTTCCAGATGT+GGG - chr1_3:59537594-59537613 Msa0129550:intron 40.0%
! GAGTATCTTTTCCAGATGTG+GGG - chr1_3:59537595-59537614 Msa0129550:intron 40.0%
GAGCAAGCTAAAATGTTTCC+CGG - chr1_3:59537619-59537638 Msa0129550:intron 40.0%
AGCAAGCTAAAATGTTTCCC+GGG - chr1_3:59537620-59537639 Msa0129550:intron 40.0%
!! AACATCAGAGTACTTTTGCC+CGG + chr1_3:59537641-59537660 None:intergenic 40.0%
! TGTATACAGCCCAGGATTTT+GGG - chr1_3:59537681-59537700 Msa0129550:five_prime_UTR 40.0%
ATTCTAGACCCCAAAATCCT+GGG + chr1_3:59537693-59537712 None:intergenic 40.0%
!!! AGGATTTTGGGGTCTAGAAT+CGG - chr1_3:59537693-59537712 Msa0129550:five_prime_UTR 40.0%
! ATGTATTCCGTTGGTTGGAA+AGG - chr1_3:59537764-59537783 Msa0129550:intron 40.0%
GTGGGAAAAAACAAAGGACA+AGG + chr1_3:59537829-59537848 None:intergenic 40.0%
ACCATCATGTAATTCACACC+CGG - chr1_3:59537888-59537907 Msa0129550:intron 40.0%
GCTGTTACTGTCAGTATTAG+CGG + chr1_3:59537995-59538014 None:intergenic 40.0%
GCTAATACTGACAGTAACAG+CGG - chr1_3:59537994-59538013 Msa0129550:intron 40.0%
!! ACAGCGGAAAGTATTCATTC+GGG - chr1_3:59538010-59538029 Msa0129550:intron 40.0%
GGCAAATTGTACGCAAAATC+TGG - chr1_3:59538280-59538299 Msa0129550:intron 40.0%
! TTGAAGTTTTCCAGCAGTCA+TGG + chr1_3:59538410-59538429 None:intergenic 40.0%
GCCAGCATTTCTCACAATAA+TGG + chr1_3:59538443-59538462 None:intergenic 40.0%
! TATTGTGAGAAATGCTGGCT+TGG - chr1_3:59538444-59538463 Msa0129550:intron 40.0%
! CAAGAGCATGGAATTCTTTC+AGG + chr1_3:59538500-59538519 None:intergenic 40.0%
CCAAAAATAAGGCAAGAGCA+TGG + chr1_3:59538512-59538531 None:intergenic 40.0%
!!! CCATGCTCTTGCCTTATTTT+TGG - chr1_3:59538509-59538528 Msa0129550:intron 40.0%
GAACATCTCTGTGGATCAAA+TGG - chr1_3:59538648-59538667 Msa0129550:intron 40.0%
! TTCACTGCCTTTTCTGATGT+AGG - chr1_3:59538870-59538889 Msa0129550:intron 40.0%
! TCACTGCCTTTTCTGATGTA+GGG - chr1_3:59538871-59538890 Msa0129550:intron 40.0%
AACAAGCCCTACATCAGAAA+AGG + chr1_3:59538880-59538899 None:intergenic 40.0%
AAAGTAGCTGATCAACATCC+GGG + chr1_3:59538913-59538932 None:intergenic 40.0%
CAAAGTAGCTGATCAACATC+CGG + chr1_3:59538914-59538933 None:intergenic 40.0%
! GATGTTGATCAGCTACTTTG+TGG - chr1_3:59538914-59538933 Msa0129550:intron 40.0%
CTACTTTGTGGTATTCATGC+TGG - chr1_3:59538926-59538945 Msa0129550:intron 40.0%
AGCGTAGGAACACATTTGTT+TGG - chr1_3:59539021-59539040 Msa0129550:five_prime_UTR 40.0%
TGAGCACAAGATCTAACAGA+TGG + chr1_3:59539115-59539134 None:intergenic 40.0%
GCGAAAGAATACTAGAGCAA+AGG + chr1_3:59539195-59539214 None:intergenic 40.0%
! CTTACCAGTCTCCTTTTGTT+GGG - chr1_3:59539300-59539319 Msa0129550:five_prime_UTR 40.0%
! TTACCAGTCTCCTTTTGTTG+GGG - chr1_3:59539301-59539320 Msa0129550:five_prime_UTR 40.0%
ACGACAACGTAATATGCAAG+TGG - chr1_3:59539607-59539626 Msa0129550:intron 40.0%
! TAGTGGATGTGTTCATGCTA+TGG + chr1_3:59539673-59539692 None:intergenic 40.0%
AGCATGAACACATCCACTAA+TGG - chr1_3:59539674-59539693 Msa0129550:intron 40.0%
! ACATCCACTAATGGCATTGA+TGG - chr1_3:59539683-59539702 Msa0129550:intron 40.0%
! TGGATTTTCTCATAGCACTG+AGG - chr1_3:59539703-59539722 Msa0129550:intron 40.0%
!! GGATTTTCTCATAGCACTGA+GGG - chr1_3:59539704-59539723 Msa0129550:intron 40.0%
! ATAGCACTGAGGGTTTAAGA+AGG - chr1_3:59539714-59539733 Msa0129550:intron 40.0%
GATGATTCGTGTGATTCAGT+TGG + chr1_3:59539845-59539864 None:intergenic 40.0%
ACACGAATCATCTGCTTGTA+TGG - chr1_3:59539853-59539872 Msa0129550:intron 40.0%
GCTGTACAATTAATAGGCGA+TGG - chr1_3:59540028-59540047 Msa0129550:intron 40.0%
ATTTCCAATAGACTGCACCT+GGG + chr1_3:59540059-59540078 None:intergenic 40.0%
GGATCAAGTATATGACGAGA+TGG - chr1_3:59540156-59540175 Msa0129550:intron 40.0%
! GCTTTGTTCTTGTGTTCTTG+TGG - chr1_3:59540329-59540348 Msa0129550:intron 40.0%
AAATCATCATCCAGCACTGT+GGG - chr1_3:59540491-59540510 Msa0129550:intron 40.0%
GAAAGCCTAATTCTCTCAAC+AGG + chr1_3:59540534-59540553 None:intergenic 40.0%
ATTAGGCTTTCCAACACACA+AGG - chr1_3:59540543-59540562 Msa0129550:intron 40.0%
GCGTTATGGAACTTTGAATG+AGG + chr1_3:59540624-59540643 None:intergenic 40.0%
GACATCCATTCACCATCTTT+GGG + chr1_3:59540646-59540665 None:intergenic 40.0%
AGACATCCATTCACCATCTT+TGG + chr1_3:59540647-59540666 None:intergenic 40.0%
GCTAACTCAGTTGACTAACA+TGG - chr1_3:59540752-59540771 Msa0129550:five_prime_UTR 40.0%
GTTGACTAACATGGTGAAAC+TGG - chr1_3:59540761-59540780 Msa0129550:five_prime_UTR 40.0%
!! TGGTAGTGAGAAGCTCTTTT+AGG - chr1_3:59540781-59540800 Msa0129550:five_prime_UTR 40.0%
!! TGAGAAGCTCTTTTAGGTAC+TGG - chr1_3:59540787-59540806 Msa0129550:five_prime_UTR 40.0%
TACTGGAAATCACTCACACA+GGG - chr1_3:59540804-59540823 Msa0129550:five_prime_UTR 40.0%
GAATTCCAGTGTTGTCTTAG+CGG - chr1_3:59541028-59541047 Msa0129550:intron 40.0%
AGAACAATCAGTTAAAGGCG+AGG + chr1_3:59541072-59541091 None:intergenic 40.0%
CTGATTGTTCTTCAGCAGAA+TGG - chr1_3:59541081-59541100 Msa0129550:intron 40.0%
!! TGCAGGTTTTGTAGAAGAAG+TGG - chr1_3:59541160-59541179 Msa0129550:five_prime_UTR 40.0%
!! GCAGGTTTTGTAGAAGAAGT+GGG - chr1_3:59541161-59541180 Msa0129550:five_prime_UTR 40.0%
CAGATCTGCACAAAATACGT+AGG + chr1_3:59541246-59541265 None:intergenic 40.0%
TATGACAGACTGGTAGAAGA+TGG + chr1_3:59541288-59541307 None:intergenic 40.0%
CCCATCAAGTTCTTCAGTAA+CGG + chr1_3:59541581-59541600 None:intergenic 40.0%
CCGTTACTGAAGAACTTGAT+GGG - chr1_3:59541578-59541597 Msa0129550:intron 40.0%
CGTTACTGAAGAACTTGATG+GGG - chr1_3:59541579-59541598 Msa0129550:intron 40.0%
AGCAAAAAGGAAGATGCATG+GGG + chr1_3:59541742-59541761 None:intergenic 40.0%
AAGCTGCTTGAGAAAGAGAA+TGG - chr1_3:59542139-59542158 Msa0129550:intron 40.0%
AGCTGCTTGAGAAAGAGAAT+GGG - chr1_3:59542140-59542159 Msa0129550:intron 40.0%
!! TGTAGAAAGGGAAGGGTATT+TGG + chr1_3:59542303-59542322 None:intergenic 40.0%
AGAGGTGGTGTAGATTCAAT+GGG + chr1_3:59542333-59542352 None:intergenic 40.0%
AAGAGGTGGTGTAGATTCAA+TGG + chr1_3:59542334-59542353 None:intergenic 40.0%
GTTGAATTTCAGACCAAGGT+TGG - chr1_3:59542434-59542453 Msa0129550:intron 40.0%
! AATTTCAGACCAAGGTTGGT+GGG - chr1_3:59542438-59542457 Msa0129550:intron 40.0%
CTGAAATGGTTCTTGCACAA+CGG - chr1_3:59542486-59542505 Msa0129550:intron 40.0%
! CTTTTGGCATTGTCAGTTCA+TGG - chr1_3:59542551-59542570 Msa0129550:intron 40.0%
! TAATGCAGTGTTGGAATGAC+TGG - chr1_3:59542742-59542761 Msa0129550:intron 40.0%
!! CTAGAGGTGTCATGTCATAT+AGG - chr1_3:59542798-59542817 Msa0129550:intron 40.0%
ATAGAATATCACTTTCCCCG+TGG + chr1_3:59542906-59542925 None:intergenic 40.0%
CTTGCTAAAGCAGTTTCTCT+AGG - chr1_3:59543028-59543047 Msa0129550:intron 40.0%
CGATACAATGTGCTCTTGTT+AGG + chr1_3:59543085-59543104 None:intergenic 40.0%
AATTACGATGCGTACTTGAC+TGG - chr1_3:59543182-59543201 Msa0129550:intron 40.0%
TACCTTTAGCCAGTCATACA+TGG + chr1_3:59543230-59543249 None:intergenic 40.0%
AAGTATAGCTCACAGCAACA+AGG + chr1_3:59543368-59543387 None:intergenic 40.0%
TAAGTGTAACCACCTAGACA+TGG - chr1_3:59543448-59543467 Msa0129550:intron 40.0%
GTCTAAAAACCATGTCTAGG+TGG + chr1_3:59543460-59543479 None:intergenic 40.0%
GCAGTCTAAAAACCATGTCT+AGG + chr1_3:59543463-59543482 None:intergenic 40.0%
! AGAGGTACAAATACATACGG+GGG + chr1_3:59543657-59543676 None:intergenic 40.0%
!!! ACCTCCTCTCGATAGTTTTT+TGG - chr1_3:59543744-59543763 Msa0129550:intron 40.0%
ACCAAAAAACTATCGAGAGG+AGG + chr1_3:59543748-59543767 None:intergenic 40.0%
TGGACCAAAAAACTATCGAG+AGG + chr1_3:59543751-59543770 None:intergenic 40.0%
GTGTTGTCGGAGATATTAGT+AGG - chr1_3:59544686-59544705 Msa0129550:intron 40.0%
CAAAATGGGGGAAAATATGC+AGG + chr1_3:59544864-59544883 None:intergenic 40.0%
TCCTCAAGCTATCAAAATGG+GGG + chr1_3:59544876-59544895 None:intergenic 40.0%
GTCCTCAAGCTATCAAAATG+GGG + chr1_3:59544877-59544896 None:intergenic 40.0%
AATAGAGCTACACACAGACA+GGG - chr1_3:59544939-59544958 Msa0129550:intron 40.0%
AAATGACCAAATGCTGCAAC+GGG - chr1_3:59544976-59544995 Msa0129550:five_prime_UTR 40.0%
!! ATAGTTCTAGCACTTCTGCT+TGG - chr1_3:59545097-59545116 Msa0129550:intron 40.0%
TGTAACGTCCTAATAGACCT+TGG - chr1_3:59545278-59545297 Msa0129550:intron 40.0%
AGGGTTGTAACACAAATCCA+AGG + chr1_3:59545298-59545317 None:intergenic 40.0%
CAAGTGACAAGACATGGATT+GGG + chr1_3:59545552-59545571 None:intergenic 40.0%
ACAAGTGACAAGACATGGAT+TGG + chr1_3:59545553-59545572 None:intergenic 40.0%
TGGTGACTGGAAAATTGCAA+TGG + chr1_3:59545771-59545790 None:intergenic 40.0%
TCCTTTCAGATGTATAGCAG+TGG - chr1_3:59545836-59545855 Msa0129550:intron 40.0%
ACCACTGCTATACATCTGAA+AGG + chr1_3:59545840-59545859 None:intergenic 40.0%
TGGGGTTTGCAATGTTTGTT+GGG + chr1_3:59545865-59545884 None:intergenic 40.0%
ATGGGGTTTGCAATGTTTGT+TGG + chr1_3:59545866-59545885 None:intergenic 40.0%
ATATCAAGACAGAGAGTGGA+AGG - chr1_3:59545909-59545928 Msa0129550:intron 40.0%
TCTGTGTGAAAGAATCCAGT+GGG - chr1_3:59545952-59545971 Msa0129550:intron 40.0%
AGTCTAGTCTGAACAACATG+TGG + chr1_3:59546091-59546110 None:intergenic 40.0%
ACATGTTGTTCAGACTAGAC+TGG - chr1_3:59546090-59546109 Msa0129550:intron 40.0%
CCATGTCAGAATACCATTCA+AGG + chr1_3:59546123-59546142 None:intergenic 40.0%
CCTTGAATGGTATTCTGACA+TGG - chr1_3:59546120-59546139 Msa0129550:intron 40.0%
TCATCTATTACCTCCTCCAA+AGG + chr1_3:59546343-59546362 None:intergenic 40.0%
TAAATCGTGAGCAGTTTGAG+TGG - chr1_3:59546475-59546494 Msa0129550:intron 40.0%
! AGATTTTGTGGAGGTTTGAC+AGG - chr1_3:59546534-59546553 Msa0129550:intron 40.0%
!! GAATACCCTCTGAAGCAATA+TGG + chr1_3:59546683-59546702 None:intergenic 40.0%
!! ATTGCTTCAGAGGGTATTCT+TGG - chr1_3:59546684-59546703 Msa0129550:intron 40.0%
ACTCAGCAAGTTCAGCATAT+GGG - chr1_3:59546713-59546732 Msa0129550:intron 40.0%
AAAGCTATGGTACCTATCAC+AGG + chr1_3:59546832-59546851 None:intergenic 40.0%
GAAGTAACGTAAGTTACCAC+AGG + chr1_3:59546977-59546996 None:intergenic 40.0%
TCTTCACTAGTGTCCAGTAA+AGG + chr1_3:59547088-59547107 None:intergenic 40.0%
GGACACTAGTGAAGATCTAT+CGG - chr1_3:59547093-59547112 Msa0129550:five_prime_UTR 40.0%
! TGTATTCAAGAAGCATGTGC+GGG + chr1_3:59547121-59547140 None:intergenic 40.0%
! GTGTATTCAAGAAGCATGTG+CGG + chr1_3:59547122-59547141 None:intergenic 40.0%
!! CAACCCCTAACGTTTTAATC+AGG + chr1_3:59547149-59547168 None:intergenic 40.0%
TACCAGCTTTGCAACATGTT+TGG - chr1_3:59547296-59547315 Msa0129550:five_prime_UTR 40.0%
TGATGAATCATTTCTCTGGC+AGG - chr1_3:59547339-59547358 Msa0129550:five_prime_UTR 40.0%
GATGAATCATTTCTCTGGCA+GGG - chr1_3:59547340-59547359 Msa0129550:five_prime_UTR 40.0%
ATGAATCATTTCTCTGGCAG+GGG - chr1_3:59547341-59547360 Msa0129550:five_prime_UTR 40.0%
GTTATTCATTCTGGGTCGTC+GGG + chr1_3:59525396-59525415 None:intergenic 45.0%
CGTTATTCATTCTGGGTCGT+CGG + chr1_3:59525397-59525416 None:intergenic 45.0%
GACAAACGTAGCATCCTTGT+TGG - chr1_3:59525479-59525498 Msa0129550:three_prime_UTR 45.0%
GTACCTGTTAGAAGCAACGA+GGG + chr1_3:59525929-59525948 None:intergenic 45.0%
TACACCTCTGAACAAGCCTA+AGG - chr1_3:59526807-59526826 Msa0129550:CDS 45.0%
TCTGCGAGACAAGCTTAATG+TGG + chr1_3:59526859-59526878 None:intergenic 45.0%
TTAAGCTTGTCTCGCAGAAG+AGG - chr1_3:59526861-59526880 Msa0129550:CDS 45.0%
AGAAGAGGATTTCTCGATGG+TGG - chr1_3:59526876-59526895 Msa0129550:CDS 45.0%
TGTTGTCTATGTTCCAGCTC+AGG + chr1_3:59526934-59526953 None:intergenic 45.0%
ATACACAAAGGATGCGGAGT+TGG + chr1_3:59527013-59527032 None:intergenic 45.0%
GCATGCATACACAAAGGATG+CGG + chr1_3:59527019-59527038 None:intergenic 45.0%
AGAGGAGGAAACAGAGAGAT+TGG - chr1_3:59527609-59527628 Msa0129550:intron 45.0%
TTAAGTGGAGGACTTTGCAG+CGG - chr1_3:59527647-59527666 Msa0129550:intron 45.0%
ACTTTGCAGCGGAGATTGAT+GGG - chr1_3:59527658-59527677 Msa0129550:intron 45.0%
! GATTGATGGGCCATTGTGTT+TGG - chr1_3:59527671-59527690 Msa0129550:intron 45.0%
AACTCCACCACCAAACACAA+TGG + chr1_3:59527684-59527703 None:intergenic 45.0%
!! ATTGTGTTTGGTGGTGGAGT+TGG - chr1_3:59527683-59527702 Msa0129550:intron 45.0%
! GAAGGAGGTTGTTGTTGCTA+TGG - chr1_3:59527899-59527918 Msa0129550:intron 45.0%
GGGCTATTAAGCCAATGTCA+TGG - chr1_3:59527980-59527999 Msa0129550:CDS 45.0%
GCATCTGACATCCATGACAT+TGG + chr1_3:59527994-59528013 None:intergenic 45.0%
TGTCATGGATGTCAGATGCT+TGG - chr1_3:59527995-59528014 Msa0129550:CDS 45.0%
ATGGATGTCAGATGCTTGGT+GGG - chr1_3:59527999-59528018 Msa0129550:CDS 45.0%
! CTTGGTGGGCAAAACTGATT+GGG - chr1_3:59528013-59528032 Msa0129550:CDS 45.0%
TCTCTTGCAGAGTTCAGTCT+TGG - chr1_3:59528122-59528141 Msa0129550:intron 45.0%
TGACGTGCTCTCAATCTTTC+CGG - chr1_3:59528903-59528922 Msa0129550:intron 45.0%
ACACATATAGGTGCATGGGA+AGG + chr1_3:59529039-59529058 None:intergenic 45.0%
!! GGAAACTCTTTAAGGCGAAG+TGG - chr1_3:59529111-59529130 Msa0129550:intron 45.0%
ATGCTAAGCTAGAACTACCG+GGG + chr1_3:59529145-59529164 None:intergenic 45.0%
! AATGCATCTGGAACGAAGAC+GGG + chr1_3:59529189-59529208 None:intergenic 45.0%
!! CCTGACAAGTCGGTTTTGTA+AGG + chr1_3:59529476-59529495 None:intergenic 45.0%
!! CCTTACAAAACCGACTTGTC+AGG - chr1_3:59529473-59529492 Msa0129550:intron 45.0%
!! CAAAACCGACTTGTCAGGTT+AGG - chr1_3:59529478-59529497 Msa0129550:intron 45.0%
!! AAACCGACTTGTCAGGTTAG+GGG - chr1_3:59529480-59529499 Msa0129550:intron 45.0%
GGGACTCTTAACAAGCATGA+TGG + chr1_3:59529577-59529596 None:intergenic 45.0%
! GCTTGTTAAGAGTCCCACAT+TGG - chr1_3:59529581-59529600 Msa0129550:intron 45.0%
! CAAAACTAGCTTGTGAGGTG+AGG + chr1_3:59529645-59529664 None:intergenic 45.0%
!!! CACCTCACAAGCTAGTTTTG+TGG - chr1_3:59529645-59529664 Msa0129550:intron 45.0%
!!! CCTCACAAGCTAGTTTTGTG+GGG - chr1_3:59529647-59529666 Msa0129550:intron 45.0%
! GCATGGATATAAATGGTGGG+TGG + chr1_3:59529763-59529782 None:intergenic 45.0%
ACCTCACACCCAACACTATT+GGG + chr1_3:59529792-59529811 None:intergenic 45.0%
GAAAAACCCAAGTCCCACAT+CGG - chr1_3:59529886-59529905 Msa0129550:CDS 45.0%
ATCTATCCGATGTGGGACTT+GGG + chr1_3:59529895-59529914 None:intergenic 45.0%
TATCTATCCGATGTGGGACT+TGG + chr1_3:59529896-59529915 None:intergenic 45.0%
CTAACTCATCCTCGCAAAAC+CGG + chr1_3:59529968-59529987 None:intergenic 45.0%
GAAAAACCCAAGTCCCACAT+CGG - chr1_3:59529886-59529905 Msa0129550:CDS 45.0%
ATCTATCCGATGTGGGACTT+GGG + chr1_3:59529895-59529914 None:intergenic 45.0%
TATCTATCCGATGTGGGACT+TGG + chr1_3:59529896-59529915 None:intergenic 45.0%
TCAACACTCACCTCACAAGT+CGG - chr1_3:59530205-59530224 Msa0129550:intron 45.0%
!! ACCTCACAAGTCGGTTTTGT+GGG - chr1_3:59530214-59530233 Msa0129550:intron 45.0%
GCGTTCTTAGAATTCGTGGT+TGG + chr1_3:59530252-59530271 None:intergenic 45.0%
TTGGGCGTTCTTAGAATTCG+TGG + chr1_3:59530256-59530275 None:intergenic 45.0%
AGCTTGGCACGTGGATAAAT+TGG - chr1_3:59530284-59530303 Msa0129550:intron 45.0%
TTGGCACGTGGATAAATTGG+TGG - chr1_3:59530287-59530306 Msa0129550:intron 45.0%
TGGCACGTGGATAAATTGGT+GGG - chr1_3:59530288-59530307 Msa0129550:intron 45.0%
TATTGGGCCTAGCTCATCTT+TGG - chr1_3:59530353-59530372 Msa0129550:intron 45.0%
! CGGTTTTCCAAAGATGAGCT+AGG + chr1_3:59530363-59530382 None:intergenic 45.0%
! CTTTGGAAAACCGCCTTGTA+AGG - chr1_3:59530370-59530389 Msa0129550:intron 45.0%
GAAAACCGCCTTGTAAGGTA+AGG - chr1_3:59530375-59530394 Msa0129550:intron 45.0%
AAACCAGCTTGTAAGGTGAG+GGG + chr1_3:59530507-59530526 None:intergenic 45.0%
CAAAACCAGCTTGTAAGGTG+AGG + chr1_3:59530509-59530528 None:intergenic 45.0%
CTCTGCAAAACCAGCTTGTA+AGG + chr1_3:59530514-59530533 None:intergenic 45.0%
AGAGCCTATCCAAGATTCGT+TGG - chr1_3:59530570-59530589 Msa0129550:intron 45.0%
GAGCCTATCCAAGATTCGTT+GGG - chr1_3:59530571-59530590 Msa0129550:intron 45.0%
AGCCTATCCAAGATTCGTTG+GGG - chr1_3:59530572-59530591 Msa0129550:intron 45.0%
ACACACCCTCAACTCAAGAA+TGG + chr1_3:59530630-59530649 None:intergenic 45.0%
!! CTTTTAGGAACCCACTAGCA+AGG - chr1_3:59530710-59530729 Msa0129550:intron 45.0%
GAGAGAGAAAGAACAAGCCT+TGG - chr1_3:59530750-59530769 Msa0129550:intron 45.0%
CAACCTCAAAAGCTAGCTCA+TGG - chr1_3:59530876-59530895 Msa0129550:intron 45.0%
ACCTCAAAAGCTAGCTCATG+GGG - chr1_3:59530878-59530897 Msa0129550:intron 45.0%
TCACTGTGCTAGGTTTGAAG+GGG + chr1_3:59530972-59530991 None:intergenic 45.0%
CTTCACTGTGCTAGGTTTGA+AGG + chr1_3:59530974-59530993 None:intergenic 45.0%
CTTCAAACCTAGCACAGTGA+AGG - chr1_3:59530972-59530991 Msa0129550:intron 45.0%
AGTGTGTGCTAGCATTAGCT+TGG + chr1_3:59531123-59531142 None:intergenic 45.0%
! TTTAGGTTCTCATCTTCGGG+TGG - chr1_3:59531441-59531460 Msa0129550:intron 45.0%
! GCAACTTTCTTGGGCTTTTC+AGG - chr1_3:59531581-59531600 Msa0129550:intron 45.0%
!! TATGGTTCTAAAGGTGGTGG+AGG - chr1_3:59531699-59531718 Msa0129550:CDS 45.0%
TTTGGTCCACTCAGTATTCG+CGG + chr1_3:59531840-59531859 None:intergenic 45.0%
GGTTAAGCTACAATCTGACC+CGG + chr1_3:59532191-59532210 None:intergenic 45.0%
TCCCTCGTACTTCCTTAGTA+AGG - chr1_3:59532628-59532647 Msa0129550:five_prime_UTR 45.0%
! CACCTTACTAAGGAAGTACG+AGG + chr1_3:59532633-59532652 None:intergenic 45.0%
CTCGTACTTCCTTAGTAAGG+TGG - chr1_3:59532631-59532650 Msa0129550:five_prime_UTR 45.0%
ATAGGAGAATTGCGCCTGAA+AGG + chr1_3:59532762-59532781 None:intergenic 45.0%
ATAAAGAGAACGAGGGAGGA+AGG - chr1_3:59533494-59533513 Msa0129550:five_prime_UTR 45.0%
TAAAGAGAACGAGGGAGGAA+GGG - chr1_3:59533495-59533514 Msa0129550:five_prime_UTR 45.0%
! GAGGAAGGGTTGTTTGAAGT+AGG - chr1_3:59533509-59533528 Msa0129550:five_prime_UTR 45.0%
! GTTGTTTGAAGTAGGGACAG+AGG - chr1_3:59533517-59533536 Msa0129550:five_prime_UTR 45.0%
CCAAAAGGAAAGGGCAAACA+AGG + chr1_3:59533589-59533608 None:intergenic 45.0%
!! CCTTGTTTGCCCTTTCCTTT+TGG - chr1_3:59533586-59533605 Msa0129550:five_prime_UTR 45.0%
TTTGGGCTACTTGCTTACGT+TGG - chr1_3:59533636-59533655 Msa0129550:five_prime_UTR 45.0%
CAGACGAAATAAGGAAGGGA+AGG + chr1_3:59533676-59533695 None:intergenic 45.0%
GGTGCAGACGAAATAAGGAA+GGG + chr1_3:59533680-59533699 None:intergenic 45.0%
GGACATGAAAATCTGGGAGA+TGG - chr1_3:59533881-59533900 Msa0129550:five_prime_UTR 45.0%
CATGAAAATCTGGGAGATGG+TGG - chr1_3:59533884-59533903 Msa0129550:five_prime_UTR 45.0%
! GGCACGATTACCTTTTACTG+AGG + chr1_3:59534051-59534070 None:intergenic 45.0%
!!! CTGGGTCTCTGGGATTTTTA+TGG - chr1_3:59534414-59534433 Msa0129550:intron 45.0%
GTTTGAACTTAAGCAGTGGC+TGG + chr1_3:59534636-59534655 None:intergenic 45.0%
! GTGTTCAGCCGACAATTTTC+AGG + chr1_3:59534717-59534736 None:intergenic 45.0%
! AGGGTATCATATTTGGGGAG+GGG - chr1_3:59534922-59534941 Msa0129550:five_prime_UTR 45.0%
GAAGAAAGGCTCTGTAAGCA+TGG - chr1_3:59535655-59535674 Msa0129550:five_prime_UTR 45.0%
!!! AGATAGCGCCTGGGATTTTT+TGG - chr1_3:59535933-59535952 Msa0129550:five_prime_UTR 45.0%
GGATTTAGCATCTTGAAGGC+TGG - chr1_3:59536057-59536076 Msa0129550:intron 45.0%
! TTCATCACTGTTTCTCACGG+AGG + chr1_3:59536121-59536140 None:intergenic 45.0%
TGTGCCAGGAGATGAATAGT+AGG - chr1_3:59536296-59536315 Msa0129550:intron 45.0%
! CAACAGGCAATTGGCTTAGA+AGG + chr1_3:59536413-59536432 None:intergenic 45.0%
CTTCTAAGCCAATTGCCTGT+TGG - chr1_3:59536411-59536430 Msa0129550:intron 45.0%
TAATGCCACCAACAGGCAAT+TGG + chr1_3:59536422-59536441 None:intergenic 45.0%
!! ATTGCCTGTTGGTGGCATTA+TGG - chr1_3:59536422-59536441 Msa0129550:intron 45.0%
TCAACCATAATGCCACCAAC+AGG + chr1_3:59536429-59536448 None:intergenic 45.0%
CATGGTATGAAGCACGAACA+CGG + chr1_3:59536826-59536845 None:intergenic 45.0%
GCATCATACCTCAGTGCAAT+CGG - chr1_3:59536950-59536969 Msa0129550:five_prime_UTR 45.0%
CATCATACCTCAGTGCAATC+GGG - chr1_3:59536951-59536970 Msa0129550:five_prime_UTR 45.0%
GCAGAACAGACAGGTTTACT+TGG - chr1_3:59537354-59537373 Msa0129550:five_prime_UTR 45.0%
TACTTGGATCAGTTGGAACC+AGG - chr1_3:59537370-59537389 Msa0129550:five_prime_UTR 45.0%
ACTTGGATCAGTTGGAACCA+GGG - chr1_3:59537371-59537390 Msa0129550:five_prime_UTR 45.0%
TTATCCCCGATCAGTGCATT+TGG - chr1_3:59537469-59537488 Msa0129550:intron 45.0%
! GAAACCAAATGCACTGATCG+GGG + chr1_3:59537476-59537495 None:intergenic 45.0%
! CCGAGTATCTTTTCCAGATG+TGG - chr1_3:59537593-59537612 Msa0129550:intron 45.0%
!! ACATCAGAGTACTTTTGCCC+GGG + chr1_3:59537640-59537659 None:intergenic 45.0%
! GTGTATACAGCCCAGGATTT+TGG - chr1_3:59537680-59537699 Msa0129550:five_prime_UTR 45.0%
! GTATACAGCCCAGGATTTTG+GGG - chr1_3:59537682-59537701 Msa0129550:five_prime_UTR 45.0%
GATTCTAGACCCCAAAATCC+TGG + chr1_3:59537694-59537713 None:intergenic 45.0%
!!! GGATTTTGGGGTCTAGAATC+GGG - chr1_3:59537694-59537713 Msa0129550:five_prime_UTR 45.0%
TTGGCATCCTTTCCAACCAA+CGG + chr1_3:59537774-59537793 None:intergenic 45.0%
GTTTATCTGGGGAAGCAACA+AGG - chr1_3:59538032-59538051 Msa0129550:intron 45.0%
GTTTGCTTCCATTCTCATCC+TGG - chr1_3:59538320-59538339 Msa0129550:intron 45.0%
! CTTGTAGCACTGGGATTCAA+AGG + chr1_3:59538375-59538394 None:intergenic 45.0%
CGAATCTCACTTGTAGCACT+GGG + chr1_3:59538384-59538403 None:intergenic 45.0%
ACGAATCTCACTTGTAGCAC+TGG + chr1_3:59538385-59538404 None:intergenic 45.0%
!! TCCTCTTTGGAACATCTCTG+TGG - chr1_3:59538639-59538658 Msa0129550:intron 45.0%
TCCACAGAGATGTTCCAAAG+AGG + chr1_3:59538643-59538662 None:intergenic 45.0%
AAGTAGCTGATCAACATCCG+GGG + chr1_3:59538912-59538931 None:intergenic 45.0%
ACGATCCTGAAAAGCTAGAG+AGG + chr1_3:59538977-59538996 None:intergenic 45.0%
GTCAGATTATGTCTCAGCGT+AGG - chr1_3:59539006-59539025 Msa0129550:five_prime_UTR 45.0%
! GCTTACCAGTCTCCTTTTGT+TGG - chr1_3:59539299-59539318 Msa0129550:five_prime_UTR 45.0%
! TACCAGTCTCCTTTTGTTGG+GGG - chr1_3:59539302-59539321 Msa0129550:five_prime_UTR 45.0%
! TGATTATGTGTGTCGCTACC+TGG - chr1_3:59539487-59539506 Msa0129550:intron 45.0%
TACCTGGAAGCAGAGCAAAT+TGG - chr1_3:59539503-59539522 Msa0129550:intron 45.0%
TGTGCGTGAGCAAGAGAAAA+AGG - chr1_3:59539532-59539551 Msa0129550:intron 45.0%
AGCAAGAGAAAAAGGCTGCA+TGG - chr1_3:59539540-59539559 Msa0129550:intron 45.0%
TGCTATGGAGCTGTATTTGC+AGG + chr1_3:59539658-59539677 None:intergenic 45.0%
TGAGGGTTTAAGAAGGAGGA+GGG - chr1_3:59539721-59539740 Msa0129550:intron 45.0%
GATCTAATCTCCCCAAAACC+TGG + chr1_3:59539796-59539815 None:intergenic 45.0%
ATCATCTGCTTGTATGGACG+TGG - chr1_3:59539859-59539878 Msa0129550:intron 45.0%
CGTGGAAACTCCATTAACAG+AGG - chr1_3:59539877-59539896 Msa0129550:intron 45.0%
GATTTCCAATAGACTGCACC+TGG + chr1_3:59540060-59540079 None:intergenic 45.0%
GGTGCAGTCTATTGGAAATC+AGG - chr1_3:59540060-59540079 Msa0129550:intron 45.0%
CATCATTGTTGGAACGCATC+TGG + chr1_3:59540294-59540313 None:intergenic 45.0%
AGGCCCAAGTTACATCTTCT+GGG - chr1_3:59540417-59540436 Msa0129550:intron 45.0%
! CACAGTGCTGGATGATGATT+TGG + chr1_3:59540492-59540511 None:intergenic 45.0%
CAAATCATCATCCAGCACTG+TGG - chr1_3:59540490-59540509 Msa0129550:intron 45.0%
CCTAATTCTCTCAACAGGCT+AGG + chr1_3:59540529-59540548 None:intergenic 45.0%
CCTAGCCTGTTGAGAGAATT+AGG - chr1_3:59540526-59540545 Msa0129550:intron 45.0%
AGTTCCATAACGCCCAAAGA+TGG - chr1_3:59540631-59540650 Msa0129550:intron 45.0%
TTCACCATCTTTGGGCGTTA+TGG + chr1_3:59540638-59540657 None:intergenic 45.0%
TAACGCCCAAAGATGGTGAA+TGG - chr1_3:59540638-59540657 Msa0129550:intron 45.0%
TCTCGCCAGCTATAACTAGT+GGG + chr1_3:59540718-59540737 None:intergenic 45.0%
GTACTGGAAATCACTCACAC+AGG - chr1_3:59540803-59540822 Msa0129550:five_prime_UTR 45.0%
!! TGTCTATGGATGTCGACTTC+TGG - chr1_3:59540856-59540875 Msa0129550:intron 45.0%
ATTCCAGACTCAATCCTCTC+TGG + chr1_3:59540900-59540919 None:intergenic 45.0%
!! CTGAGCTTTGAGGATTTCCT+TGG + chr1_3:59541138-59541157 None:intergenic 45.0%
CTTCAAGCTGGTACACTTCA+AGG + chr1_3:59541328-59541347 None:intergenic 45.0%
!! TTGGAAACTGGTCTTCAAGC+TGG + chr1_3:59541340-59541359 None:intergenic 45.0%
AGGCCTGTCGAAAGAACAAA+AGG + chr1_3:59541416-59541435 None:intergenic 45.0%
! TTTTGTTCTTTCGACAGGCC+TGG - chr1_3:59541415-59541434 Msa0129550:five_prime_UTR 45.0%
ACAGGCCTGGAAAAGTTTGT+TGG - chr1_3:59541428-59541447 Msa0129550:five_prime_UTR 45.0%
! TGTGGCCAACAAACTTTTCC+AGG + chr1_3:59541436-59541455 None:intergenic 45.0%
TATTGTGCATGTTCCCCCTT+TGG - chr1_3:59541542-59541561 Msa0129550:intron 45.0%
ATTGTGCATGTTCCCCCTTT+GGG - chr1_3:59541543-59541562 Msa0129550:intron 45.0%
GCCGTTACTGAAGAACTTGA+TGG - chr1_3:59541577-59541596 Msa0129550:intron 45.0%
AGTGCAAGGTTGAATTCGAG+GGG + chr1_3:59541853-59541872 None:intergenic 45.0%
GAGTGCAAGGTTGAATTCGA+GGG + chr1_3:59541854-59541873 None:intergenic 45.0%
TGAGTGCAAGGTTGAATTCG+AGG + chr1_3:59541855-59541874 None:intergenic 45.0%
CGAATTCAACCTTGCACTCA+AGG - chr1_3:59541855-59541874 Msa0129550:intron 45.0%
TGAGCAAGAAGGTGAAAAGG+AGG + chr1_3:59541924-59541943 None:intergenic 45.0%
GCTGCTTGAGAAAGAGAATG+GGG - chr1_3:59542141-59542160 Msa0129550:intron 45.0%
CTGCTTGAGAAAGAGAATGG+GGG - chr1_3:59542142-59542161 Msa0129550:intron 45.0%
! TTGGCTTATAGTCTTGGGCA+AGG - chr1_3:59542196-59542215 Msa0129550:intron 45.0%
!! AGAAAGGGAAGGGTATTTGG+AGG + chr1_3:59542300-59542319 None:intergenic 45.0%
!! GAGGTGTTGTAGAAAGGGAA+GGG + chr1_3:59542310-59542329 None:intergenic 45.0%
!! ATGGGGAGGTGTTGTAGAAA+GGG + chr1_3:59542315-59542334 None:intergenic 45.0%
!! AATGGGGAGGTGTTGTAGAA+AGG + chr1_3:59542316-59542335 None:intergenic 45.0%
GAGGTGGTGTAGATTCAATG+GGG + chr1_3:59542332-59542351 None:intergenic 45.0%
GAATTTCAGACCAAGGTTGG+TGG - chr1_3:59542437-59542456 Msa0129550:intron 45.0%
CGTTGTGCAAGAACCATTTC+AGG + chr1_3:59542488-59542507 None:intergenic 45.0%
! TTCATGGCGGCTTAAGCTTT+TGG - chr1_3:59542535-59542554 Msa0129550:intron 45.0%
GTTCATGGCATTCGTTATGC+TGG - chr1_3:59542566-59542585 Msa0129550:intron 45.0%
ATACCTCTGCTCATTTGCCA+CGG - chr1_3:59542886-59542905 Msa0129550:intron 45.0%
!! AGCAGTTTCTCTAGGATTGC+AGG - chr1_3:59543036-59543055 Msa0129550:intron 45.0%
CAGGCTGTACAAATCCGATA+TGG - chr1_3:59543055-59543074 Msa0129550:intron 45.0%
CATCTCTCACCATGTATGAC+TGG - chr1_3:59543218-59543237 Msa0129550:intron 45.0%
! CACCATGTATGACTGGCTAA+AGG - chr1_3:59543225-59543244 Msa0129550:intron 45.0%
GGAAAGGTCACAAAGCAAAC+TGG + chr1_3:59543703-59543722 None:intergenic 45.0%
! TCTTTTCCTGCTAGCTAGTG+TGG + chr1_3:59543771-59543790 None:intergenic 45.0%
CCTGCTGTTGAATGTGTTGT+CGG - chr1_3:59544673-59544692 Msa0129550:intron 45.0%
!! TCCCCCATTTTGATAGCTTG+AGG - chr1_3:59544872-59544891 Msa0129550:intron 45.0%
GAATAGAGCTACACACAGAC+AGG - chr1_3:59544938-59544957 Msa0129550:intron 45.0%
ATAGAGCTACACACAGACAG+GGG - chr1_3:59544940-59544959 Msa0129550:intron 45.0%
TGTTATATGGGCTCCAATGC+TGG - chr1_3:59545025-59545044 Msa0129550:five_prime_UTR 45.0%
!! TGACAAGACATGGATTGGGA+GGG + chr1_3:59545548-59545567 None:intergenic 45.0%
CATGCACAAGTGACAAGACA+TGG + chr1_3:59545558-59545577 None:intergenic 45.0%
TCACTTGTGCATGTGTGCAA+GGG - chr1_3:59545565-59545584 Msa0129550:intron 45.0%
GAAAAAGAGTTGGAGGTCCT+GGG + chr1_3:59545675-59545694 None:intergenic 45.0%
TGAGCTAGCGGAAAAAGAGT+TGG + chr1_3:59545685-59545704 None:intergenic 45.0%
CTCTGTGTGAAAGAATCCAG+TGG - chr1_3:59545951-59545970 Msa0129550:intron 45.0%
GATGACAATGCTGATCCCAA+TGG - chr1_3:59545989-59546008 Msa0129550:intron 45.0%
CAGCTTGACAGCATATCAAC+TGG + chr1_3:59546045-59546064 None:intergenic 45.0%
TTTCAAGGGACAGGCCAAAA+GGG - chr1_3:59546164-59546183 Msa0129550:intron 45.0%
!! CCAGTGACACGAAAGTATCT+TGG + chr1_3:59546304-59546323 None:intergenic 45.0%
CCAAGATACTTTCGTGTCAC+TGG - chr1_3:59546301-59546320 Msa0129550:intron 45.0%
!! TACTTTCGTGTCACTGGTTC+AGG - chr1_3:59546307-59546326 Msa0129550:intron 45.0%
AATTGCATGGCCAACTTACG+TGG + chr1_3:59546594-59546613 None:intergenic 45.0%
CACTCAGCAAGTTCAGCATA+TGG - chr1_3:59546712-59546731 Msa0129550:intron 45.0%
CTCAGCAAGTTCAGCATATG+GGG - chr1_3:59546714-59546733 Msa0129550:intron 45.0%
TCAGCAAGTTCAGCATATGG+GGG - chr1_3:59546715-59546734 Msa0129550:intron 45.0%
TCATCCTTAAGTCAGAGCAC+TGG + chr1_3:59546785-59546804 None:intergenic 45.0%
AGAACCTACCTTCCTGTGAT+AGG - chr1_3:59546817-59546836 Msa0129550:intron 45.0%
CTATGGTACCTATCACAGGA+AGG + chr1_3:59546828-59546847 None:intergenic 45.0%
!! TAGGTTGATAGCCATTTGCG+AGG - chr1_3:59547016-59547035 Msa0129550:intron 45.0%
GAGTTGAAGAGGTCCTTTAC+TGG - chr1_3:59547072-59547091 Msa0129550:five_prime_UTR 45.0%
! GTATTCAAGAAGCATGTGCG+GGG + chr1_3:59547120-59547139 None:intergenic 45.0%
AGTGCCACACATATAGAACG+AGG - chr1_3:59547223-59547242 Msa0129550:five_prime_UTR 45.0%
CTGACCTCGTTCTATATGTG+TGG + chr1_3:59547230-59547249 None:intergenic 45.0%
TATAGAACGAGGTCAGAGCT+CGG - chr1_3:59547234-59547253 Msa0129550:five_prime_UTR 45.0%
CACCAAACATGTTGCAAAGC+TGG + chr1_3:59547301-59547320 None:intergenic 45.0%
! GCTTTGCAACATGTTTGGTG+CGG - chr1_3:59547301-59547320 Msa0129550:five_prime_UTR 45.0%
!!! TAAAAATATATATGAAATTT+TGG - chr1_3:59538127-59538146 Msa0129550:intron 5.0%
!!! AATTTAATTTTTTAAATGAT+GGG + chr1_3:59542222-59542241 None:intergenic 5.0%
!!! AAATTTAATTTTTTAAATGA+TGG + chr1_3:59542223-59542242 None:intergenic 5.0%
!! ATCATTTAAAAAATTAAATT+TGG - chr1_3:59542222-59542241 Msa0129550:intron 5.0%
!! TCATTTAAAAAATTAAATTT+GGG - chr1_3:59542223-59542242 Msa0129550:intron 5.0%
GGATGCTACGTTTGTCCAGT+AGG + chr1_3:59525475-59525494 None:intergenic 50.0%
GAACAACGAAAAGCCGTTGC+CGG - chr1_3:59525740-59525759 Msa0129550:three_prime_UTR 50.0%
!! ACGAAGAAAGCACTTTCCGG+CGG + chr1_3:59525803-59525822 None:intergenic 50.0%
CTTCCCTCGTTGCTTCTAAC+AGG - chr1_3:59525923-59525942 Msa0129550:CDS 50.0%
CGTACCTGTTAGAAGCAACG+AGG + chr1_3:59525930-59525949 None:intergenic 50.0%
ACCTCTGAACAAGCCTAAGG+TGG - chr1_3:59526810-59526829 Msa0129550:CDS 50.0%
CCTCTGAACAAGCCTAAGGT+GGG - chr1_3:59526811-59526830 Msa0129550:CDS 50.0%
TTCAGCTTCTGACCCACCTT+AGG + chr1_3:59526826-59526845 None:intergenic 50.0%
TAAGGTGGGTCAGAAGCTGA+AGG - chr1_3:59526825-59526844 Msa0129550:CDS 50.0%
CGCAGAAGAGGATTTCTCGA+TGG - chr1_3:59526873-59526892 Msa0129550:CDS 50.0%
! CTTTGGAGGCCTATCATGCA+AGG + chr1_3:59527532-59527551 None:intergenic 50.0%
GACTTTGCAGCGGAGATTGA+TGG - chr1_3:59527657-59527676 Msa0129550:intron 50.0%
! TGATGGGCCATTGTGTTTGG+TGG - chr1_3:59527674-59527693 Msa0129550:intron 50.0%
CATGGATGTCAGATGCTTGG+TGG - chr1_3:59527998-59528017 Msa0129550:CDS 50.0%
! GCTTGGTGGGCAAAACTGAT+TGG - chr1_3:59528012-59528031 Msa0129550:CDS 50.0%
GGAAGTCAACTGCAGAATGG+TGG + chr1_3:59528777-59528796 None:intergenic 50.0%
GACAATAGTTGCGGCTGAGT+TGG + chr1_3:59528929-59528948 None:intergenic 50.0%
AGGAGGCAATCGTTGTGATG+GGG + chr1_3:59528979-59528998 None:intergenic 50.0%
GAGGAGGCAATCGTTGTGAT+GGG + chr1_3:59528980-59528999 None:intergenic 50.0%
TCATGGATCGTCGAATCTCG+AGG + chr1_3:59528999-59529018 None:intergenic 50.0%
TGCTAAGCTAGAACTACCGG+GGG + chr1_3:59529144-59529163 None:intergenic 50.0%
! ATGCATCTGGAACGAAGACG+GGG + chr1_3:59529188-59529207 None:intergenic 50.0%
AGAGACAGGGCAAATGCATC+TGG + chr1_3:59529201-59529220 None:intergenic 50.0%
AGATGGCTTAGCCAGATAGC+TGG + chr1_3:59529378-59529397 None:intergenic 50.0%
AGAATTGGGAAGGCAACTCG+AGG + chr1_3:59529432-59529451 None:intergenic 50.0%
TCCCACATTGGATGAGAGAC+CGG - chr1_3:59529593-59529612 Msa0129550:intron 50.0%
TCCGGTCTCTCATCCAATGT+GGG + chr1_3:59529597-59529616 None:intergenic 50.0%
TTCCGGTCTCTCATCCAATG+TGG + chr1_3:59529598-59529617 None:intergenic 50.0%
! CCCCACAAAACTAGCTTGTG+AGG + chr1_3:59529650-59529669 None:intergenic 50.0%
AGCAGAAACCTGATAGCAGG+TGG + chr1_3:59529734-59529753 None:intergenic 50.0%
!! ACACTATTGGGCTTGGTGCA+TGG + chr1_3:59529780-59529799 None:intergenic 50.0%
TGCACCAAGCCCAATAGTGT+TGG - chr1_3:59529780-59529799 Msa0129550:CDS 50.0%
GCACCAAGCCCAATAGTGTT+GGG - chr1_3:59529781-59529800 Msa0129550:CDS 50.0%
ACACCCAACACTATTGGGCT+TGG + chr1_3:59529787-59529806 None:intergenic 50.0%
CACCTCACACCCAACACTAT+TGG + chr1_3:59529793-59529812 None:intergenic 50.0%
TAGGGGAGGTCCTCACTATT+GGG - chr1_3:59529864-59529883 Msa0129550:CDS 50.0%
GCAATCCTCACCTTACAAGC+CGG - chr1_3:59529946-59529965 Msa0129550:CDS 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG + chr1_3:59529954-59529973 None:intergenic 50.0%
! CGGTTTTGCGAGGATGAGTT+AGG - chr1_3:59529966-59529985 Msa0129550:CDS 50.0%
TTGGTGCGTGAATCAGTAGG+TGG + chr1_3:59530036-59530055 None:intergenic 50.0%
!! CACCTCACAAGTCGGTTTTG+TGG - chr1_3:59530213-59530232 Msa0129550:intron 50.0%
!! CCTCACAAGTCGGTTTTGTG+GGG - chr1_3:59530215-59530234 Msa0129550:intron 50.0%
GTGCCAAGCTCGATAGTGTT+GGG + chr1_3:59530274-59530293 None:intergenic 50.0%
CACGTGGATAAATTGGTGGG+TGG - chr1_3:59530291-59530310 Msa0129550:intron 50.0%
GCATCCCTTACCTTACAAGG+CGG + chr1_3:59530383-59530402 None:intergenic 50.0%
! GAGGCATCCCTTACCTTACA+AGG + chr1_3:59530386-59530405 None:intergenic 50.0%
CACCCCAACGAATCTTGGAT+AGG + chr1_3:59530577-59530596 None:intergenic 50.0%
TGGATCACCCCAACGAATCT+TGG + chr1_3:59530582-59530601 None:intergenic 50.0%
TTGGGGTGATCCAACCACTT+CGG - chr1_3:59530589-59530608 Msa0129550:intron 50.0%
TATAGCGTGACCGAAGTGGT+TGG + chr1_3:59530602-59530621 None:intergenic 50.0%
CATCTATAGCGTGACCGAAG+TGG + chr1_3:59530606-59530625 None:intergenic 50.0%
! TGAGTTGAGGGTGTGTGTTG+AGG - chr1_3:59530634-59530653 Msa0129550:intron 50.0%
! GAGTTGAGGGTGTGTGTTGA+GGG - chr1_3:59530635-59530654 Msa0129550:intron 50.0%
TTCTCTGCTCCCTTGCTAGT+GGG + chr1_3:59530723-59530742 None:intergenic 50.0%
TTTCTCTGCTCCCTTGCTAG+TGG + chr1_3:59530724-59530743 None:intergenic 50.0%
!!! ACCCCATGAGCTAGCTTTTG+AGG + chr1_3:59530882-59530901 None:intergenic 50.0%
CACTGTGCTAGGTTTGAAGG+GGG + chr1_3:59530971-59530990 None:intergenic 50.0%
CCAACTACTAGCTGAATGGC+AGG + chr1_3:59531484-59531503 None:intergenic 50.0%
CCTGCCATTCAGCTAGTAGT+TGG - chr1_3:59531481-59531500 Msa0129550:intron 50.0%
AAAGGTAGTGAGGCCCATGA+AGG + chr1_3:59531517-59531536 None:intergenic 50.0%
!! TGGTAGCTGTGTTGGTCTTG+TGG - chr1_3:59531543-59531562 Msa0129550:intron 50.0%
!! GCTGTGTTGGTCTTGTGGAT+TGG - chr1_3:59531548-59531567 Msa0129550:intron 50.0%
CTTAGAGGGAAGGAGTTGCT+CGG + chr1_3:59532212-59532231 None:intergenic 50.0%
TTCTGTGCAGATCTGGTGTG+AGG - chr1_3:59532988-59533007 Msa0129550:five_prime_UTR 50.0%
CGGTGCAGACGAAATAAGGA+AGG + chr1_3:59533681-59533700 None:intergenic 50.0%
CAGTCGGTGCAGACGAAATA+AGG + chr1_3:59533685-59533704 None:intergenic 50.0%
!! TTTCGTCTGCACCGACTGAA+TGG - chr1_3:59533687-59533706 Msa0129550:five_prime_UTR 50.0%
CAAGAAGCAGGCCATTCAGT+CGG + chr1_3:59533701-59533720 None:intergenic 50.0%
CTGTGGCACTATCCAATACC+TGG - chr1_3:59533909-59533928 Msa0129550:five_prime_UTR 50.0%
TTTCCTCTGCTTGTCCGATG+AGG - chr1_3:59534001-59534020 Msa0129550:five_prime_UTR 50.0%
TTCCTCTGCTTGTCCGATGA+GGG - chr1_3:59534002-59534021 Msa0129550:five_prime_UTR 50.0%
TGAAGTTTGCCCTCCCTCAT+CGG + chr1_3:59534018-59534037 None:intergenic 50.0%
!! GGGCTGAGTTTTCGAGAAAC+AGG + chr1_3:59534077-59534096 None:intergenic 50.0%
TGCGTTAACCTCAACTTGGC+TGG - chr1_3:59534288-59534307 Msa0129550:intron 50.0%
ACATGTAGCCAGCCAAGTTG+AGG + chr1_3:59534299-59534318 None:intergenic 50.0%
! GTTGTGTTGGTACCAGGATC+TGG - chr1_3:59534603-59534622 Msa0129550:five_prime_UTR 50.0%
GGGTATCATATTTGGGGAGG+GGG - chr1_3:59534923-59534942 Msa0129550:five_prime_UTR 50.0%
GGTATCATATTTGGGGAGGG+GGG - chr1_3:59534924-59534943 Msa0129550:five_prime_UTR 50.0%
! ATGCTCGCGGGCTATTATGT+TGG - chr1_3:59535276-59535295 Msa0129550:five_prime_UTR 50.0%
TCCTTGAAGAAGATAGCGCC+TGG - chr1_3:59535923-59535942 Msa0129550:five_prime_UTR 50.0%
CCTTGAAGAAGATAGCGCCT+GGG - chr1_3:59535924-59535943 Msa0129550:five_prime_UTR 50.0%
! ATCACTGTTTCTCACGGAGG+AGG + chr1_3:59536118-59536137 None:intergenic 50.0%
CTAAGCCAATTGCCTGTTGG+TGG - chr1_3:59536414-59536433 Msa0129550:intron 50.0%
TCTTGACGAAATGGGCGGAA+TGG - chr1_3:59536503-59536522 Msa0129550:intron 50.0%
! CGATGTAGGTGCCACATGAT+CGG + chr1_3:59536997-59537016 None:intergenic 50.0%
TTGATAAACCCAAGTGGCCC+TGG + chr1_3:59537391-59537410 None:intergenic 50.0%
! GGGTCTAGAATCGGGATTGA+GGG - chr1_3:59537702-59537721 Msa0129550:five_prime_UTR 50.0%
! GGTCTAGAATCGGGATTGAG+GGG - chr1_3:59537703-59537722 Msa0129550:five_prime_UTR 50.0%
! GTCTAGAATCGGGATTGAGG+GGG - chr1_3:59537704-59537723 Msa0129550:five_prime_UTR 50.0%
! GGGGAAGGTTCTGGTTATTG+TGG - chr1_3:59537723-59537742 Msa0129550:five_prime_UTR 50.0%
GCCGGGTGTGAATTACATGA+TGG + chr1_3:59537892-59537911 None:intergenic 50.0%
TCTTCCTGTAATGCAGCTGC+CGG + chr1_3:59537910-59537929 None:intergenic 50.0%
! GATGAAGTATCACGTGCTCG+AGG + chr1_3:59537973-59537992 None:intergenic 50.0%
TGCGCTTCTTGTTCCACTTG+TGG + chr1_3:59538062-59538081 None:intergenic 50.0%
AGATTCGTTGCCATGACTGC+TGG - chr1_3:59538397-59538416 Msa0129550:intron 50.0%
!! GGCTTGTTGTTGATGATCCC+CGG - chr1_3:59538892-59538911 Msa0129550:intron 50.0%
!!! GATCGCCTCTCTAGCTTTTC+AGG - chr1_3:59538969-59538988 Msa0129550:five_prime_UTR 50.0%
! ACCAGTCTCCTTTTGTTGGG+GGG - chr1_3:59539303-59539322 Msa0129550:five_prime_UTR 50.0%
!! AAGTGCTGGAAGGTGTGACA+CGG - chr1_3:59539328-59539347 Msa0129550:five_prime_UTR 50.0%
! CACCAATTTGCTCTGCTTCC+AGG + chr1_3:59539508-59539527 None:intergenic 50.0%
GCACTGAGGGTTTAAGAAGG+AGG - chr1_3:59539717-59539736 Msa0129550:intron 50.0%
CTGAGGGTTTAAGAAGGAGG+AGG - chr1_3:59539720-59539739 Msa0129550:intron 50.0%
GAGGGTTTAAGAAGGAGGAG+GGG - chr1_3:59539722-59539741 Msa0129550:intron 50.0%
AATAGGCGATGGTGTTTCCC+AGG - chr1_3:59540039-59540058 Msa0129550:intron 50.0%
GTTTCCCAGGTGCAGTCTAT+TGG - chr1_3:59540052-59540071 Msa0129550:intron 50.0%
GATCCTGCAAGTCTGCAGTT+AGG - chr1_3:59540244-59540263 Msa0129550:intron 50.0%
CTTCCTAACTGCAGACTTGC+AGG + chr1_3:59540250-59540269 None:intergenic 50.0%
CTGCAAGTCTGCAGTTAGGA+AGG - chr1_3:59540248-59540267 Msa0129550:intron 50.0%
CAGGCCCAAGTTACATCTTC+TGG - chr1_3:59540416-59540435 Msa0129550:intron 50.0%
CAATACTCAACCCACAGTGC+TGG + chr1_3:59540504-59540523 None:intergenic 50.0%
GAAGACGTGACCTTGTGTGT+TGG + chr1_3:59540556-59540575 None:intergenic 50.0%
CTCTCGCCAGCTATAACTAG+TGG + chr1_3:59540719-59540738 None:intergenic 50.0%
ATAGCTGGCGAGAGAAAGCA+TGG - chr1_3:59540725-59540744 Msa0129550:intron 50.0%
TCTGGTTGAATCCCATCCTC+TGG + chr1_3:59540882-59540901 None:intergenic 50.0%
AGGATGGGATTCAACCAGAG+AGG - chr1_3:59540883-59540902 Msa0129550:intron 50.0%
CAACCAGAGAGGATTGAGTC+TGG - chr1_3:59540894-59540913 Msa0129550:intron 50.0%
GAAGACCGCTAAGACAACAC+TGG + chr1_3:59541036-59541055 None:intergenic 50.0%
!! CAAAGAGAGCATCCCAAAGG+GGG + chr1_3:59541558-59541577 None:intergenic 50.0%
!! GCAAAGAGAGCATCCCAAAG+GGG + chr1_3:59541559-59541578 None:intergenic 50.0%
!! GGCAAAGAGAGCATCCCAAA+GGG + chr1_3:59541560-59541579 None:intergenic 50.0%
GTTGAAGGGTCAACCTTCAG+AGG + chr1_3:59541667-59541686 None:intergenic 50.0%
AAGGAAGATGCATGGGGAGT+GGG + chr1_3:59541736-59541755 None:intergenic 50.0%
AAAGGAAGATGCATGGGGAG+TGG + chr1_3:59541737-59541756 None:intergenic 50.0%
TTCGAGGGGGTGGTATTGTT+AGG + chr1_3:59541839-59541858 None:intergenic 50.0%
GTGCAAGGTTGAATTCGAGG+GGG + chr1_3:59541852-59541871 None:intergenic 50.0%
! ACATGATTGAAGGTGCGTCC+CGG - chr1_3:59541983-59542002 Msa0129550:intron 50.0%
AATGGGGGCCACCTTCTATT+CGG - chr1_3:59542157-59542176 Msa0129550:intron 50.0%
CTTAAAACAAGGGGGAAGGG+TGG + chr1_3:59542270-59542289 None:intergenic 50.0%
!! GGAGGTGTTGTAGAAAGGGA+AGG + chr1_3:59542311-59542330 None:intergenic 50.0%
GTGGTGTAGATTCAATGGGG+AGG + chr1_3:59542329-59542348 None:intergenic 50.0%
ATTAGCACGATTAGGGCGCA+AGG + chr1_3:59542410-59542429 None:intergenic 50.0%
CTCGTGCTTCATGCCTGAAA+TGG - chr1_3:59542472-59542491 Msa0129550:intron 50.0%
! GCAGTGTTGGAATGACTGGA+CGG - chr1_3:59542746-59542765 Msa0129550:intron 50.0%
TACCTCTGCTCATTTGCCAC+GGG - chr1_3:59542887-59542906 Msa0129550:intron 50.0%
TGAGCAGCATGTTGTCGAGA+TGG + chr1_3:59542986-59543005 None:intergenic 50.0%
TTTGGTCCACACTAGCTAGC+AGG - chr1_3:59543762-59543781 Msa0129550:intron 50.0%
CCGACAACACATTCAACAGC+AGG + chr1_3:59544676-59544695 None:intergenic 50.0%
TAGAGCTACACACAGACAGG+GGG - chr1_3:59544941-59544960 Msa0129550:intron 50.0%
GCAAATCCCGTTGCAGCATT+TGG + chr1_3:59544985-59545004 None:intergenic 50.0%
!! AGACATGGATTGGGAGGGAA+AGG + chr1_3:59545543-59545562 None:intergenic 50.0%
!! GTGACAAGACATGGATTGGG+AGG + chr1_3:59545549-59545568 None:intergenic 50.0%
GTCACTTGTGCATGTGTGCA+AGG - chr1_3:59545564-59545583 Msa0129550:intron 50.0%
CACTTGTGCATGTGTGCAAG+GGG - chr1_3:59545566-59545585 Msa0129550:intron 50.0%
ACTTGTGCATGTGTGCAAGG+GGG - chr1_3:59545567-59545586 Msa0129550:intron 50.0%
GGAAAAAGAGTTGGAGGTCC+TGG + chr1_3:59545676-59545695 None:intergenic 50.0%
GCTAGCGGAAAAAGAGTTGG+AGG + chr1_3:59545682-59545701 None:intergenic 50.0%
!! GCTCAACTGGTTTGAGCTAG+CGG + chr1_3:59545697-59545716 None:intergenic 50.0%
CTGAATTGAGCGAATCCCAC+TGG + chr1_3:59545970-59545989 None:intergenic 50.0%
! GACTGGTTCAGTCCCTTGAA+TGG - chr1_3:59546107-59546126 Msa0129550:intron 50.0%
!! CCTGTCCCTTGAAAGTATCC+AGG + chr1_3:59546158-59546177 None:intergenic 50.0%
CCTGGATACTTTCAAGGGAC+AGG - chr1_3:59546155-59546174 Msa0129550:intron 50.0%
CTTTCAAGGGACAGGCCAAA+AGG - chr1_3:59546163-59546182 Msa0129550:intron 50.0%
ACGGCTCGATGAACAGCTTT+AGG - chr1_3:59546263-59546282 Msa0129550:intron 50.0%
!! TCACTGGTTCAGGTGACGTT+AGG - chr1_3:59546317-59546336 Msa0129550:intron 50.0%
TTCAGGTGACGTTAGGCCTT+TGG - chr1_3:59546324-59546343 Msa0129550:intron 50.0%
ATCGTGAGCAGTTTGAGTGG+TGG - chr1_3:59546478-59546497 Msa0129550:intron 50.0%
TCGTGAGCAGTTTGAGTGGT+GGG - chr1_3:59546479-59546498 Msa0129550:intron 50.0%
TGGAGGTTTGACAGGACCTA+TGG - chr1_3:59546542-59546561 Msa0129550:intron 50.0%
GGAAACACCACCACGTAAGT+TGG - chr1_3:59546581-59546600 Msa0129550:intron 50.0%
GCGTCCAACAGCTAGAACAA+AGG + chr1_3:59546751-59546770 None:intergenic 50.0%
GACTCCAGTGCTCTGACTTA+AGG - chr1_3:59546778-59546797 Msa0129550:intron 50.0%
CAGGAAGGTAGGTTCTCGTA+GGG + chr1_3:59546813-59546832 None:intergenic 50.0%
ACAGGAAGGTAGGTTCTCGT+AGG + chr1_3:59546814-59546833 None:intergenic 50.0%
GGTACCTATCACAGGAAGGT+AGG + chr1_3:59546824-59546843 None:intergenic 50.0%
AGGGGTTGAGTACCATCTTC+TGG - chr1_3:59547161-59547180 Msa0129550:five_prime_UTR 50.0%
GTGGCACTCAAACCATACGT+GGG + chr1_3:59547211-59547230 None:intergenic 50.0%
TGTGGCACTCAAACCATACG+TGG + chr1_3:59547212-59547231 None:intergenic 50.0%
ATAGAACGAGGTCAGAGCTC+GGG - chr1_3:59547235-59547254 Msa0129550:five_prime_UTR 50.0%
!! TGTTTGGTGCGGTGTCAAGA+TGG - chr1_3:59547312-59547331 Msa0129550:five_prime_UTR 50.0%
TCATTCTGGGTCGTCGGGAA+TGG + chr1_3:59525391-59525410 None:intergenic 55.0%
CGGAAACTACCGCAACTAGC+CGG + chr1_3:59525762-59525781 None:intergenic 55.0%
! CGGCTAGTTGCGGTAGTTTC+CGG - chr1_3:59525760-59525779 Msa0129550:three_prime_UTR 55.0%
GGAGAAAGAGAACACCTCGC+CGG + chr1_3:59525782-59525801 None:intergenic 55.0%
! GAGGTGTTCTCTTTCTCCGC+CGG - chr1_3:59525784-59525803 Msa0129550:three_prime_UTR 55.0%
! CCCACCTTAGGCTTGTTCAG+AGG + chr1_3:59526814-59526833 None:intergenic 55.0%
! TCTCGATGGTGGCAATGCCA+TGG - chr1_3:59526887-59526906 Msa0129550:CDS 55.0%
TGTTCCAGCTCAGGACCAGT+GGG + chr1_3:59526925-59526944 None:intergenic 55.0%
ATGTTCCAGCTCAGGACCAG+TGG + chr1_3:59526926-59526945 None:intergenic 55.0%
! TGGGCCATTGTGTTTGGTGG+TGG - chr1_3:59527677-59527696 Msa0129550:intron 55.0%
!! GTGTTTGGTGGTGGAGTTGG+TGG - chr1_3:59527686-59527705 Msa0129550:intron 55.0%
! ATAGTTGCGGCTGAGTTGGC+CGG + chr1_3:59528925-59528944 None:intergenic 55.0%
CGAGGAGGCAATCGTTGTGA+TGG + chr1_3:59528981-59529000 None:intergenic 55.0%
TGGATCGTCGAATCTCGAGG+AGG + chr1_3:59528996-59529015 None:intergenic 55.0%
! TGCATCTGGAACGAAGACGG+GGG + chr1_3:59529187-59529206 None:intergenic 55.0%
!! CGGTTTCTGGGACAGAGACA+GGG + chr1_3:59529214-59529233 None:intergenic 55.0%
!! ACGGTTTCTGGGACAGAGAC+AGG + chr1_3:59529215-59529234 None:intergenic 55.0%
GCACCCCTAACCTGACAAGT+CGG + chr1_3:59529486-59529505 None:intergenic 55.0%
AGCCTCCTCCAAGATCCGTT+GGG - chr1_3:59529708-59529727 Msa0129550:intron 55.0%
! GCCCAATAGTGTTGGGTGTG+AGG - chr1_3:59529788-59529807 Msa0129550:CDS 55.0%
GTAGGGGAGGTCCTCACTAT+TGG - chr1_3:59529863-59529882 Msa0129550:CDS 55.0%
!! CCTCGCAAAACCGGCTTGTA+AGG + chr1_3:59529959-59529978 None:intergenic 55.0%
!! CCTTACAAGCCGGTTTTGCG+AGG - chr1_3:59529956-59529975 Msa0129550:CDS 55.0%
!! GGCTTGGTGCGTGAATCAGT+AGG + chr1_3:59530039-59530058 None:intergenic 55.0%
!! CACCAAGCCCAAAGAGTGCT+GGG - chr1_3:59530050-59530069 Msa0129550:CDS 55.0%
GCAATCCCCACCTTACAAGC+CGG - chr1_3:59530152-59530171 Msa0129550:intron 55.0%
!! CCCCACAAAACCGACTTGTG+AGG + chr1_3:59530218-59530237 None:intergenic 55.0%
!! CGGTTTTGTGGGGTTGTGTC+AGG - chr1_3:59530225-59530244 Msa0129550:intron 55.0%
ACGCCCAACACTATCGAGCT+TGG - chr1_3:59530268-59530287 Msa0129550:intron 55.0%
CGTGCCAAGCTCGATAGTGT+TGG + chr1_3:59530275-59530294 None:intergenic 55.0%
ACACTATCGAGCTTGGCACG+TGG - chr1_3:59530275-59530294 Msa0129550:intron 55.0%
! AAATTGGTGGGTGGCCCGAT+TGG - chr1_3:59530300-59530319 Msa0129550:intron 55.0%
ACACCCCTCACCTTACAAGC+TGG - chr1_3:59530501-59530520 Msa0129550:intron 55.0%
GTAGTGAGGCCCATGAAGGA+TGG + chr1_3:59531513-59531532 None:intergenic 55.0%
TCTGCTTGTCCGATGAGGGA+GGG - chr1_3:59534006-59534025 Msa0129550:five_prime_UTR 55.0%
TTGATCTGGGTCTGGGTCTC+TGG - chr1_3:59534403-59534422 Msa0129550:intron 55.0%
TGATCTGGGTCTGGGTCTCT+GGG - chr1_3:59534404-59534423 Msa0129550:intron 55.0%
ACCTGACTGGTGCAACTTCC+TGG - chr1_3:59534654-59534673 Msa0129550:five_prime_UTR 55.0%
ATCATATTTGGGGAGGGGGG+TGG - chr1_3:59534927-59534946 Msa0129550:five_prime_UTR 55.0%
ATCAGTGGAGGGAGAGACCA+AGG - chr1_3:59535216-59535235 Msa0129550:five_prime_UTR 55.0%
CCCAGGCGCTATCTTCTTCA+AGG + chr1_3:59535927-59535946 None:intergenic 55.0%
CATGCCCCTAGTCCTCCTAT+TGG - chr1_3:59536036-59536055 Msa0129550:five_prime_UTR 55.0%
CCTCAAAAGCAAGGTGTGGG+CGG - chr1_3:59536354-59536373 Msa0129550:intron 55.0%
AAAAGCAAGGTGTGGGCGGA+GGG - chr1_3:59536358-59536377 Msa0129550:intron 55.0%
ACTTCTGCCCGATTGCACTG+AGG + chr1_3:59536961-59536980 None:intergenic 55.0%
GCAGAGCAAGCAGAACAGAC+AGG - chr1_3:59537345-59537364 Msa0129550:five_prime_UTR 55.0%
AGTTGGAACCAGGGCCACTT+GGG - chr1_3:59537380-59537399 Msa0129550:five_prime_UTR 55.0%
!! TAGCTTGCTCACCCCACATC+TGG + chr1_3:59537609-59537628 None:intergenic 55.0%
GGCTTTCGTGTATACAGCCC+AGG - chr1_3:59537673-59537692 Msa0129550:five_prime_UTR 55.0%
! GGGGTCTAGAATCGGGATTG+AGG - chr1_3:59537701-59537720 Msa0129550:five_prime_UTR 55.0%
AGAATCGGGATTGAGGGGGA+AGG - chr1_3:59537708-59537727 Msa0129550:five_prime_UTR 55.0%
CTTCCTGTAATGCAGCTGCC+GGG + chr1_3:59537909-59537928 None:intergenic 55.0%
GGCAGCTGCATTACAGGAAG+AGG - chr1_3:59537909-59537928 Msa0129550:intron 55.0%
ACGTGCTCGAGGCAAATCAG+AGG + chr1_3:59537962-59537981 None:intergenic 55.0%
GCAACAAGGAGAGCCACAAG+TGG - chr1_3:59538046-59538065 Msa0129550:intron 55.0%
GTGTCACACCTTCCAGCACT+TGG + chr1_3:59539329-59539348 None:intergenic 55.0%
TCGACTTCTGGCCAGAGGAT+GGG - chr1_3:59540868-59540887 Msa0129550:intron 55.0%
TCCAGCAGCTGATGTTGCCA+AGG - chr1_3:59541118-59541137 Msa0129550:five_prime_UTR 55.0%
TCCTTGGCAACATCAGCTGC+TGG + chr1_3:59541122-59541141 None:intergenic 55.0%
ATCCTCAAAGCTCAGCGTGC+AGG - chr1_3:59541143-59541162 Msa0129550:five_prime_UTR 55.0%
AACCTGCACGCTGAGCTTTG+AGG + chr1_3:59541148-59541167 None:intergenic 55.0%
!! CGGCAAAGAGAGCATCCCAA+AGG + chr1_3:59541561-59541580 None:intergenic 55.0%
GAGAGAAGGCTCTCCTCTGA+AGG - chr1_3:59541651-59541670 Msa0129550:intron 55.0%
AGGAAGATGCATGGGGAGTG+GGG + chr1_3:59541735-59541754 None:intergenic 55.0%
CAAGGTTGAATTCGAGGGGG+TGG + chr1_3:59541849-59541868 None:intergenic 55.0%
!! GTGAAAAGGAGGCACTGCAC+CGG + chr1_3:59541913-59541932 None:intergenic 55.0%
! TCGTGTTGGTCTCGGATACC+GGG + chr1_3:59542004-59542023 None:intergenic 55.0%
! GTCGTGTTGGTCTCGGATAC+CGG + chr1_3:59542005-59542024 None:intergenic 55.0%
!! TGTCGGTGTCGTGTTGGTCT+CGG + chr1_3:59542012-59542031 None:intergenic 55.0%
!! CACATGTGTCGGTGTCGTGT+TGG + chr1_3:59542018-59542037 None:intergenic 55.0%
GTGAACATGCCCACCAACCT+TGG + chr1_3:59542450-59542469 None:intergenic 55.0%
ACCTCTGCTCATTTGCCACG+GGG - chr1_3:59542888-59542907 Msa0129550:intron 55.0%
AGGTGACGTTAGGCCTTTGG+AGG - chr1_3:59546327-59546346 Msa0129550:intron 55.0%
! TGACGTTAGGCCTTTGGAGG+AGG - chr1_3:59546330-59546349 Msa0129550:intron 55.0%
TGCATGGCCAACTTACGTGG+TGG + chr1_3:59546591-59546610 None:intergenic 55.0%
GGGTGAGCTTGGAGTTGAAG+AGG - chr1_3:59547061-59547080 Msa0129550:five_prime_UTR 55.0%
CTGGGCTTAATGCCCACGTA+TGG - chr1_3:59547196-59547215 Msa0129550:five_prime_UTR 55.0%
TAGAACGAGGTCAGAGCTCG+GGG - chr1_3:59547236-59547255 Msa0129550:five_prime_UTR 55.0%
! AAGCCGTTGCCGGCTAGTTG+CGG - chr1_3:59525750-59525769 Msa0129550:three_prime_UTR 60.0%
CTACCGCAACTAGCCGGCAA+CGG + chr1_3:59525756-59525775 None:intergenic 60.0%
AGTTGCGGTAGTTTCCGGCG+AGG - chr1_3:59525765-59525784 Msa0129550:three_prime_UTR 60.0%
! CGATGGTGGCAATGCCATGG+TGG - chr1_3:59526890-59526909 Msa0129550:CDS 60.0%
! GTGGGCTGATCTGACCACCA+TGG + chr1_3:59526907-59526926 None:intergenic 60.0%
TGGTGGTCAGATCAGCCCAC+TGG - chr1_3:59526907-59526926 Msa0129550:CDS 60.0%
GATCTCGTCACCAGCACGTG+CGG - chr1_3:59529078-59529097 Msa0129550:intron 60.0%
GAGCCTCCTCCAAGATCCGT+TGG - chr1_3:59529707-59529726 Msa0129550:intron 60.0%
CCTGATAGCAGGTGGCCCAA+CGG + chr1_3:59529726-59529745 None:intergenic 60.0%
! GCACCAAGCCCAAAGAGTGC+TGG - chr1_3:59530049-59530068 Msa0129550:CDS 60.0%
CGTCACGCCCAGCACTCTTT+GGG + chr1_3:59530060-59530079 None:intergenic 60.0%
!! CCAAAGAGTGCTGGGCGTGA+CGG - chr1_3:59530058-59530077 Msa0129550:CDS 60.0%
!! CAAAGAGTGCTGGGCGTGAC+GGG - chr1_3:59530059-59530078 Msa0129550:CDS 60.0%
!! AAAGAGTGCTGGGCGTGACG+GGG - chr1_3:59530060-59530079 Msa0129550:CDS 60.0%
TGCTAGGTTTGAAGGGGGCG+TGG + chr1_3:59530966-59530985 None:intergenic 60.0%
!! TCTGGGAGATGGTGGGTCTG+TGG - chr1_3:59533892-59533911 Msa0129550:five_prime_UTR 60.0%
CTCCCTCATCGGACAAGCAG+AGG + chr1_3:59534007-59534026 None:intergenic 60.0%
CTCTGCTTGTCCGATGAGGG+AGG - chr1_3:59534005-59534024 Msa0129550:five_prime_UTR 60.0%
GCCAGGAAGTTGCACCAGTC+AGG + chr1_3:59534658-59534677 None:intergenic 60.0%
ATATTTGGGGAGGGGGGTGG+TGG - chr1_3:59534930-59534949 Msa0129550:five_prime_UTR 60.0%
!! CCGCCCACACCTTGCTTTTG+AGG + chr1_3:59536357-59536376 None:intergenic 60.0%
CAAAAGCAAGGTGTGGGCGG+AGG - chr1_3:59536357-59536376 Msa0129550:intron 60.0%
AAAGCAAGGTGTGGGCGGAG+GGG - chr1_3:59536359-59536378 Msa0129550:intron 60.0%
! TCCTCGGATTAGGCGTGTCC+CGG - chr1_3:59536712-59536731 Msa0129550:intron 60.0%
GATTAGGCGTGTCCCGGTGT+CGG - chr1_3:59536718-59536737 Msa0129550:intron 60.0%
CAGTTGGAACCAGGGCCACT+TGG - chr1_3:59537379-59537398 Msa0129550:five_prime_UTR 60.0%
GGGATTGAGGGGGAAGGTTC+TGG - chr1_3:59537714-59537733 Msa0129550:five_prime_UTR 60.0%
ACACCCGGCAGCTGCATTAC+AGG - chr1_3:59537903-59537922 Msa0129550:intron 60.0%
GCCCCCCAACAAAAGGAGAC+TGG + chr1_3:59539307-59539326 None:intergenic 60.0%
GCACTTGGCCCCCCAACAAA+AGG + chr1_3:59539314-59539333 None:intergenic 60.0%
TTTGTTGGGGGGCCAAGTGC+TGG - chr1_3:59539314-59539333 Msa0129550:five_prime_UTR 60.0%
!! GGATGTCGACTTCTGGCCAG+AGG - chr1_3:59540863-59540882 Msa0129550:intron 60.0%
! GTCGACTTCTGGCCAGAGGA+TGG - chr1_3:59540867-59540886 Msa0129550:intron 60.0%
GGAAGATGCATGGGGAGTGG+GGG + chr1_3:59541734-59541753 None:intergenic 60.0%
TCCCCGTGGCAAATGAGCAG+AGG + chr1_3:59542892-59542911 None:intergenic 60.0%
! GTGCAAGGGGGTGCATCTGT+AGG - chr1_3:59545579-59545598 Msa0129550:intron 60.0%
CTTTGCCCGGGTTTGAACCC+AGG - chr1_3:59545655-59545674 Msa0129550:intron 60.0%
GAGGTCCTGGGTTCAAACCC+GGG + chr1_3:59545663-59545682 None:intergenic 60.0%
GGAGGTCCTGGGTTCAAACC+CGG + chr1_3:59545664-59545683 None:intergenic 60.0%
ACTTCGGGGGGTAGCTCAAC+TGG + chr1_3:59545710-59545729 None:intergenic 60.0%
GCAAGAGCTGAGGGTGAGCT+TGG - chr1_3:59547050-59547069 Msa0129550:five_prime_UTR 60.0%
AGCTCGGGGCAGTATGATGC+TGG - chr1_3:59547250-59547269 Msa0129550:five_prime_UTR 60.0%
TCGGGGCAGTATGATGCTGG+TGG - chr1_3:59547253-59547272 Msa0129550:five_prime_UTR 60.0%
TCAGCCCACTGGTCCTGAGC+TGG - chr1_3:59526918-59526937 Msa0129550:CDS 65.0%
AGCACGTGCGGCCATCGTTC+CGG - chr1_3:59529090-59529109 Msa0129550:intron 65.0%
GCGAAGTGGTCTGCTTCCCC+CGG - chr1_3:59529125-59529144 Msa0129550:intron 65.0%
GGCCCAACGGATCTTGGAGG+AGG + chr1_3:59529713-59529732 None:intergenic 65.0%
GGTGGCCCAACGGATCTTGG+AGG + chr1_3:59529716-59529735 None:intergenic 65.0%
GCAGGTGGCCCAACGGATCT+TGG + chr1_3:59529719-59529738 None:intergenic 65.0%
CCGTTGGGCCACCTGCTATC+AGG - chr1_3:59529723-59529742 Msa0129550:intron 65.0%
CGCCCAGCACTCTTTGGGCT+TGG + chr1_3:59530055-59530074 None:intergenic 65.0%
CCGTCACGCCCAGCACTCTT+TGG + chr1_3:59530061-59530080 None:intergenic 65.0%
!! AAGAGTGCTGGGCGTGACGG+GGG - chr1_3:59530061-59530080 Msa0129550:CDS 65.0%
! TGGGCGTGACGGGGGTGTAT+TGG - chr1_3:59530069-59530088 Msa0129550:CDS 65.0%
! GGGCGTGACGGGGGTGTATT+GGG - chr1_3:59530070-59530089 Msa0129550:CDS 65.0%
GCTGGTGCACTGCCAGATCC+TGG + chr1_3:59534618-59534637 None:intergenic 65.0%
CGTGCACGTCTGTGCATGCC+AGG + chr1_3:59534675-59534694 None:intergenic 65.0%
GGGGACTGCGCAAATGCTCG+CGG - chr1_3:59535263-59535282 Msa0129550:five_prime_UTR 65.0%
GGGACTGCGCAAATGCTCGC+GGG - chr1_3:59535264-59535283 Msa0129550:five_prime_UTR 65.0%
AAGCAAGGTGTGGGCGGAGG+GGG - chr1_3:59536360-59536379 Msa0129550:intron 65.0%
ACCGGGACACGCCTAATCCG+AGG + chr1_3:59536716-59536735 None:intergenic 65.0%
TCGGACACGTGTCCGACACC+GGG + chr1_3:59536733-59536752 None:intergenic 65.0%
GTCGGACACGTGTCCGACAC+CGG + chr1_3:59536736-59536755 None:intergenic 65.0%
!! TTGGGGGGCCAAGTGCTGGA+AGG - chr1_3:59539318-59539337 Msa0129550:five_prime_UTR 65.0%
!! GCATGGGGAGTGGGGGCATT+TGG + chr1_3:59541727-59541746 None:intergenic 65.0%
GGAACGATGGCCGCACGTGC+TGG + chr1_3:59529091-59529110 None:intergenic 70.0%
AGCAAGGTGTGGGCGGAGGG+GGG - chr1_3:59536361-59536380 Msa0129550:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 59525379 59547615 59525379 ID=Msa0129550;Name=Msa0129550
chr1_3 mRNA 59525379 59547615 59525379 ID=Msa0129550-mRNA-1;Parent=Msa0129550;Name=Msa0129550-mRNA-1;_AED=0.05;_eAED=0.05;_QI=5817|1|1|1|0.8|0.85|21|461|709
chr1_3 exon 59525379 59525975 59525379 ID=Msa0129550-mRNA-1:exon:19422;Parent=Msa0129550-mRNA-1
chr1_3 exon 59526156 59526300 59526156 ID=Msa0129550-mRNA-1:exon:19421;Parent=Msa0129550-mRNA-1
chr1_3 exon 59526400 59526547 59526400 ID=Msa0129550-mRNA-1:exon:19420;Parent=Msa0129550-mRNA-1
chr1_3 exon 59526643 59527149 59526643 ID=Msa0129550-mRNA-1:exon:19419;Parent=Msa0129550-mRNA-1
chr1_3 exon 59527948 59528106 59527948 ID=Msa0129550-mRNA-1:exon:19418;Parent=Msa0129550-mRNA-1
chr1_3 exon 59529748 59530143 59529748 ID=Msa0129550-mRNA-1:exon:19417;Parent=Msa0129550-mRNA-1
chr1_3 exon 59531612 59534102 59531612 ID=Msa0129550-mRNA-1:exon:19416;Parent=Msa0129550-mRNA-1
chr1_3 exon 59534529 59536055 59534529 ID=Msa0129550-mRNA-1:exon:19415;Parent=Msa0129550-mRNA-1
chr1_3 exon 59536841 59537074 59536841 ID=Msa0129550-mRNA-1:exon:19414;Parent=Msa0129550-mRNA-1
chr1_3 exon 59537299 59537472 59537299 ID=Msa0129550-mRNA-1:exon:19413;Parent=Msa0129550-mRNA-1
chr1_3 exon 59537645 59537773 59537645 ID=Msa0129550-mRNA-1:exon:19412;Parent=Msa0129550-mRNA-1
chr1_3 exon 59538935 59539112 59538935 ID=Msa0129550-mRNA-1:exon:19411;Parent=Msa0129550-mRNA-1
chr1_3 exon 59539197 59539412 59539197 ID=Msa0129550-mRNA-1:exon:19410;Parent=Msa0129550-mRNA-1
chr1_3 exon 59539912 59539996 59539912 ID=Msa0129550-mRNA-1:exon:19409;Parent=Msa0129550-mRNA-1
chr1_3 exon 59540737 59540852 59540737 ID=Msa0129550-mRNA-1:exon:19408;Parent=Msa0129550-mRNA-1
chr1_3 exon 59541096 59541282 59541096 ID=Msa0129550-mRNA-1:exon:19407;Parent=Msa0129550-mRNA-1
chr1_3 exon 59541392 59541548 59541392 ID=Msa0129550-mRNA-1:exon:19406;Parent=Msa0129550-mRNA-1
chr1_3 exon 59544705 59544862 59544705 ID=Msa0129550-mRNA-1:exon:19405;Parent=Msa0129550-mRNA-1
chr1_3 exon 59544951 59545107 59544951 ID=Msa0129550-mRNA-1:exon:19404;Parent=Msa0129550-mRNA-1
chr1_3 exon 59546394 59546474 59546394 ID=Msa0129550-mRNA-1:exon:19403;Parent=Msa0129550-mRNA-1
chr1_3 exon 59547050 59547615 59547050 ID=Msa0129550-mRNA-1:exon:19402;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59547050 59547615 59547050 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59546394 59546474 59546394 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59544951 59545107 59544951 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59544705 59544862 59544705 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59541392 59541548 59541392 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59541096 59541282 59541096 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59540737 59540852 59540737 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59539912 59539996 59539912 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59539197 59539412 59539197 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59538935 59539112 59538935 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59537645 59537773 59537645 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59537299 59537472 59537299 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59536841 59537074 59536841 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59534529 59536055 59534529 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 five_prime_UTR 59532251 59534102 59532251 ID=Msa0129550-mRNA-1:five_prime_utr;Parent=Msa0129550-mRNA-1
chr1_3 CDS 59531612 59532250 59531612 ID=Msa0129550-mRNA-1:cds;Parent=Msa0129550-mRNA-1
chr1_3 CDS 59529748 59530143 59529748 ID=Msa0129550-mRNA-1:cds;Parent=Msa0129550-mRNA-1
chr1_3 CDS 59527948 59528106 59527948 ID=Msa0129550-mRNA-1:cds;Parent=Msa0129550-mRNA-1
chr1_3 CDS 59526643 59527149 59526643 ID=Msa0129550-mRNA-1:cds;Parent=Msa0129550-mRNA-1
chr1_3 CDS 59526400 59526547 59526400 ID=Msa0129550-mRNA-1:cds;Parent=Msa0129550-mRNA-1
chr1_3 CDS 59526156 59526300 59526156 ID=Msa0129550-mRNA-1:cds;Parent=Msa0129550-mRNA-1
chr1_3 CDS 59525840 59525975 59525840 ID=Msa0129550-mRNA-1:cds;Parent=Msa0129550-mRNA-1
chr1_3 three_prime_UTR 59525379 59525839 59525379 ID=Msa0129550-mRNA-1:three_prime_utr;Parent=Msa0129550-mRNA-1
Gene Sequence

>Msa0129550

ATGGATGTGCTAACTCAGTTGACTAACATGGTGAAACTGGTAGTGAGAAGCTCTTTTAGGTACTGGAAATCACTCACACAGGGAGCAGAATCGCCTCCTTATTTTGTTCAAGTGTCTATGGATGTCGACTTCTGGCCAGAGGATGGGATTCAACCAGAGAGGATTGAGTCTGGAATTAATAAGTTGCTCAGAGTTATCCACAATGATAAGTGCAAGGAAAAGAACCCAAATATTTGCTCTTTTGCTAGTAAGGTTAACATTCAAAGCATTGAAAGAAGTAAAGAGAATTCCAGTGTTGTCTTAGCGGTCTTCGAGATTGTGTATGCCTCGCCTTTAACTGATTGTTCTTCAGCAGAATGGAATAAATCTTTAACTCCAGCAGCTGATGTTGCCAAGGAAATCCTCAAAGCTCAGCGTGCAGGTTTTGTAGAAGAAGTGGGATTCCCTTACCGTATTCTTTCTGTAATTGGTGGAGGCAAGAGAGAAGTTGATCTGTATGCCTACGTATTTTGTGCAGATCTGATTGTATTCTTTCTTGTTGCCATCTTCTACCAGTCTGTCATAAAAAACAAAAGTGAGTTCCTTGAAGTGTACCAGCTTGAAGACCAGTTTCCAAAAGAATATGTCTTTATTTTGATGGCCATCTTCTTCTTGATTGTACTTGATCGTATAATATACCTCTGCTCATTTGCCACGGGGAAAGTGATATTCTATATTTTCAACTTCATTCTCTTCACATATTCAGTTACAGAGTATGATTGGCAATTGGATCCATCTCGACAACATGCTGCTCAGTTAGCTCTCCGTGCCATATTTCTTGCTAAAGCAGTTTCTCTAGGATTGCAGGCTGTACAAATCCGATATGGCATTCCTAACAAGAGCACATTGTATCGACAGTTTTTGACGAGTGAAGTTTCACGAATCAACTACTTAGGATATAGACTTTATCGTGCTCTGCCATTCCTTTATGAATTACGATGCGTACTTGACTGGTCATGCACAACTACATCTCTCACCATGTATGACTGGCTAAAGCTTGAGGACATAAATGCAAGTTTGTACCTTGTCAAATGTGATTCAGTCTTGAATAGAGCTACACACAGACAGGGGGAGAAGCAAACGAAAATGACCAAATGCTGCAACGGGATTTGCCTGTTTTTTGTATTAATTTGTGTTATATGGGCTCCAATGCTGATGTATAGCAGTGGTAACCCAACAAACATTGCAAACCCCATTAAAGATGCTAGCTTTCAGATTGATATCAAGACAGAGAGTGGAAGGTTGAATTTGTACCAAACTACTCTGTGTGAAAGAATCCAGTGGGATTCGCTCAATTCAGATGACAATGCTGATCCCAATGGCTATTTGAATGCATATAATAAGAATGATATCCAGTTGATATGCTGTCAAGCTGATGCTAGTACATTATGGCTTGTTCCACATGTTGTTCAGACTAGACTGGTTCAGTCCCTTGAATGGTATTCTGACATGGAAATTTTTTTCACCTGGATACTTTCAAGGGACAGGCCAAAAGGGAAAGAAGTTGTGAAATATGAAAAGCCTATTGATTCTCTATATCTTCCAACACAGTCTGATGTTCAAAAAGTTCTTAACGGCTCGATGAACAGCTTTAGGATTTATAACGTTTATCCAAGATACTTTCGTGTCACTGGTTCAGGTGACGTTAGGCCTTTGGAGGAGGATAGTGCTGTTAGTGCTGATCTAGTTATAAATCGTGAGCAGTTTGAGTGGTGGGCCTTTAAAGATATTAATCCATCAAATTTAAGTAGATTTTGTGGAGGTTTGACAGGACCTATGGCAATCATAATATCTGAGGAAACACCACCACAGGGTATTCTTGGTGACACACTCAGCAAGTTCAGCATATGGGGGCTTTACATAACCTTTGTTCTAGCTGTTGGACGCTTTATCAGACTCCAGTGCTCTGACTTAAGGATGAGAATTCCCTACGAGAACCTACCTTCCTGTGATAGGTTGATAGCCATTTGCGAGGATATATACAATGCAAGAGCTGAGGGTGAGCTTGGAGTTGAAGAGGTCCTTTACTGGACACTAGTGAAGATCTATCGGTCCCCGCACATGCTTCTTGAATACACCAAACCTGATTAA
Protein sequence

>Msa0129550

MDVLTQLTNMVKLVVRSSFRYWKSLTQGAESPPYFVQVSMDVDFWPEDGIQPERIESGINKLLRVIHNDKCKEKNPNICSFASKVNIQSIERSKENSSVVLAVFEIVYASPLTDCSSAEWNKSLTPAADVAKEILKAQRAGFVEEVGFPYRILSVIGGGKREVDLYAYVFCADLIVFFLVAIFYQSVIKNKSEFLEVYQLEDQFPKEYVFILMAIFFLIVLDRIIYLCSFATGKVIFYIFNFILFTYSVTEYDWQLDPSRQHAAQLALRAIFLAKAVSLGLQAVQIRYGIPNKSTLYRQFLTSEVSRINYLGYRLYRALPFLYELRCVLDWSCTTTSLTMYDWLKLEDINASLYLVKCDSVLNRATHRQGEKQTKMTKCCNGICLFFVLICVIWAPMLMYSSGNPTNIANPIKDASFQIDIKTESGRLNLYQTTLCERIQWDSLNSDDNADPNGYLNAYNKNDIQLICCQADASTLWLVPHVVQTRLVQSLEWYSDMEIFFTWILSRDRPKGKEVVKYEKPIDSLYLPTQSDVQKVLNGSMNSFRIYNVYPRYFRVTGSGDVRPLEEDSAVSADLVINREQFEWWAFKDINPSNLSRFCGGLTGPMAIIISEETPPQGILGDTLSKFSIWGLYITFVLAVGRFIRLQCSDLRMRIPYENLPSCDRLIAICEDIYNARAEGELGVEEVLYWTLVKIYRSPHMLLEYTKPD*