Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195710 | XP_003594059.2 | 98.295 | 880 | 15 | 0 | 1 | 880 | 1 | 880 | 0.0 | 1767 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195710 | sp|Q0WPJ7|RF298_ARATH | 37.320 | 903 | 435 | 20 | 5 | 879 | 14 | 813 | 6.96e-155 | 478 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195710 | G7IFN5 | 98.295 | 880 | 15 | 0 | 1 | 880 | 1 | 880 | 0.0 | 1767 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005270 | Msa0195710 | 0.804755 | 1.855017e-49 | -8.615850e-47 |
| Msa0037120 | Msa0195710 | 0.809171 | 2.158978e-50 | -8.615850e-47 |
| Msa0059890 | Msa0195710 | 0.822268 | 2.593796e-53 | -8.615850e-47 |
| Msa0076700 | Msa0195710 | 0.806789 | 6.934869e-50 | -8.615850e-47 |
| Msa0077180 | Msa0195710 | 0.813661 | 2.286417e-51 | -8.615850e-47 |
| Msa0077450 | Msa0195710 | 0.819098 | 1.388176e-52 | -8.615850e-47 |
| Msa0083090 | Msa0195710 | 0.812632 | 3.845358e-51 | -8.615850e-47 |
| Msa0084340 | Msa0195710 | 0.815511 | 8.905287e-52 | -8.615850e-47 |
| Msa0085370 | Msa0195710 | 0.804855 | 1.768171e-49 | -8.615850e-47 |
| Msa0092440 | Msa0195710 | 0.839865 | 1.226911e-57 | -8.615850e-47 |
| Msa0138210 | Msa0195710 | 0.861324 | 1.111652e-63 | -8.615850e-47 |
| Msa0143850 | Msa0195710 | 0.817962 | 2.512013e-52 | -8.615850e-47 |
| Msa0170140 | Msa0195710 | 0.805433 | 1.338239e-49 | -8.615850e-47 |
| Msa0177170 | Msa0195710 | 0.804311 | 2.296298e-49 | -8.615850e-47 |
| Msa0183420 | Msa0195710 | 0.821385 | 4.152730e-53 | -8.615850e-47 |
| Msa0189110 | Msa0195710 | 0.804586 | 2.011558e-49 | -8.615850e-47 |
| Msa0193540 | Msa0195710 | 0.805769 | 1.137539e-49 | -8.615850e-47 |
| Msa0195710 | Msa0200560 | 0.826475 | 2.658919e-54 | -8.615850e-47 |
| Msa0195710 | Msa0202730 | 0.819789 | 9.657587e-53 | -8.615850e-47 |
| Msa0195710 | Msa0231240 | 0.820075 | 8.306088e-53 | -8.615850e-47 |
| Msa0195710 | Msa0236770 | 0.813360 | 2.662863e-51 | -8.615850e-47 |
| Msa0195710 | Msa0237470 | 0.959681 | 1.037516e-117 | -8.615850e-47 |
| Msa0195710 | Msa0243250 | 0.810550 | 1.090226e-50 | -8.615850e-47 |
| Msa0195710 | Msa0269520 | 0.828849 | 7.153485e-55 | -8.615850e-47 |
| Msa0195710 | Msa0280150 | 0.823466 | 1.364597e-53 | -8.615850e-47 |
| Msa0195710 | Msa0281640 | 0.810299 | 1.234877e-50 | -8.615850e-47 |
| Msa0195710 | Msa0305330 | 0.808936 | 2.423774e-50 | -8.615850e-47 |
| Msa0195710 | Msa0308560 | 0.810387 | 1.181953e-50 | -8.615850e-47 |
| Msa0195710 | Msa0314060 | 0.809904 | 1.502572e-50 | -8.615850e-47 |
| Msa0195710 | Msa0320800 | 0.817087 | 3.956065e-52 | -8.615850e-47 |
| Msa0195710 | Msa0323370 | 0.818439 | 1.958905e-52 | -8.615850e-47 |
| Msa0195710 | Msa0347670 | 0.800424 | 1.450747e-48 | -8.615850e-47 |
| Msa0195710 | Msa0347950 | 0.824915 | 6.229956e-54 | -8.615850e-47 |
| Msa0195710 | Msa0347990 | 0.826129 | 3.212656e-54 | -8.615850e-47 |
| Msa0195710 | Msa0348530 | 0.804334 | 2.270923e-49 | -8.615850e-47 |
| Msa0195710 | Msa0377440 | 0.812685 | 3.744242e-51 | -8.615850e-47 |
| Msa0195710 | Msa0381000 | 0.804306 | 2.301852e-49 | -8.615850e-47 |
| Msa0195710 | Msa0381080 | 0.805341 | 1.398954e-49 | -8.615850e-47 |
| Msa0195710 | Msa0390960 | 0.827449 | 1.554661e-54 | -8.615850e-47 |
| Msa0195710 | Msa0403490 | 0.808871 | 2.502786e-50 | -8.615850e-47 |
| Msa0195710 | Msa0411410 | 0.802003 | 6.893358e-49 | -8.615850e-47 |
| Msa0195710 | Msa0417650 | 0.848190 | 7.175611e-60 | -8.615850e-47 |
| Msa0195710 | Msa0417730 | 0.833773 | 4.398436e-56 | -8.615850e-47 |
| Msa0195710 | Msa0423840 | 0.814532 | 1.468319e-51 | -8.615850e-47 |
| Msa0195710 | Msa0430870 | 0.808507 | 2.993635e-50 | -8.615850e-47 |
| Msa0195710 | Msa0473980 | 0.807914 | 4.004947e-50 | -8.615850e-47 |
| Msa0195710 | Msa0500590 | 0.803379 | 3.586154e-49 | -8.615850e-47 |
| Msa0195710 | Msa0517650 | 0.805193 | 1.501987e-49 | -8.615850e-47 |
| Msa0195710 | Msa0573040 | 0.827177 | 1.806447e-54 | -8.615850e-47 |
| Msa0195710 | Msa0621600 | 0.800658 | 1.299698e-48 | -8.615850e-47 |
| Msa0195710 | Msa0621650 | 0.881947 | 1.570488e-70 | -8.615850e-47 |
| Msa0195710 | Msa0661320 | 0.800258 | 1.568338e-48 | -8.615850e-47 |
| Msa0195710 | Msa0689760 | 0.815434 | 9.262841e-52 | -8.615850e-47 |
| Msa0195710 | Msa0698440 | 0.840490 | 8.428230e-58 | -8.615850e-47 |
| Msa0195710 | Msa0716860 | 0.803486 | 3.407563e-49 | -8.615850e-47 |
| Msa0195710 | Msa0741160 | 0.816888 | 4.384868e-52 | -8.615850e-47 |
| Msa0195710 | Msa0763890 | 0.813173 | 2.926029e-51 | -8.615850e-47 |
| Msa0195710 | Msa0763920 | 0.814165 | 1.770528e-51 | -8.615850e-47 |
| Msa0195710 | Msa0773310 | 0.801089 | 1.061588e-48 | -8.615850e-47 |
| Msa0195710 | Msa0773590 | 0.802422 | 5.652668e-49 | -8.615850e-47 |
| Msa0195710 | Msa0780280 | 0.849709 | 2.716924e-60 | -8.615850e-47 |
| Msa0195710 | Msa0789560 | 0.812199 | 4.781418e-51 | -8.615850e-47 |
| Msa0195710 | Msa0821800 | 0.838460 | 2.839148e-57 | -8.615850e-47 |
| Msa0195710 | Msa0861830 | 0.837126 | 6.247922e-57 | -8.615850e-47 |
| Msa0195710 | Msa0900620 | 0.810973 | 8.830323e-51 | -8.615850e-47 |
| Msa0195710 | Msa0902710 | 0.806413 | 8.327696e-50 | -8.615850e-47 |
| Msa0195710 | Msa0981310 | 0.827155 | 1.829164e-54 | -8.615850e-47 |
| Msa0195710 | Msa1026640 | 0.804392 | 2.207867e-49 | -8.615850e-47 |
| Msa0195710 | Msa1077070 | 0.811512 | 6.745865e-51 | -8.615850e-47 |
| Msa0195710 | Msa1096550 | 0.806319 | 8.713049e-50 | -8.615850e-47 |
| Msa0195710 | Msa1109820 | 0.818974 | 1.480871e-52 | -8.615850e-47 |
| Msa0195710 | Msa1122780 | 0.809779 | 1.598306e-50 | -8.615850e-47 |
| Msa0195710 | Msa1130530 | 0.801701 | 7.952533e-49 | -8.615850e-47 |
| Msa0195710 | Msa1133570 | 0.824122 | 9.577579e-54 | -8.615850e-47 |
| Msa0195710 | Msa1209190 | 0.801964 | 7.021903e-49 | -8.615850e-47 |
| Msa0195710 | Msa1259640 | 0.800034 | 1.741938e-48 | -8.615850e-47 |
| Msa0195710 | Msa1288450 | 0.833733 | 4.501648e-56 | -8.615850e-47 |
| Msa0195710 | Msa1299330 | 0.804882 | 1.744755e-49 | -8.615850e-47 |
| Msa0195710 | Msa1333730 | 0.811818 | 5.787316e-51 | -8.615850e-47 |
| Msa0195710 | Msa1338250 | 0.801242 | 9.876078e-49 | -8.615850e-47 |
| Msa0195710 | Msa1341490 | 0.805473 | 1.312452e-49 | -8.615850e-47 |
| Msa0195710 | Msa1360200 | 0.998838 | 1.541269e-278 | -8.615850e-47 |
| Msa0195710 | Msa1366300 | 0.828216 | 1.016765e-54 | -8.615850e-47 |
| Msa0195710 | Msa1390350 | 0.801472 | 8.861501e-49 | -8.615850e-47 |
| Msa0195710 | Msa1400070 | 0.816250 | 6.091471e-52 | -8.615850e-47 |
| Msa0195710 | Msa1401460 | 0.808500 | 3.004774e-50 | -8.615850e-47 |
| Msa0195710 | Msa1420250 | 0.815526 | 8.836571e-52 | -8.615850e-47 |
| Msa0195710 | Msa1426910 | 0.801725 | 7.863124e-49 | -8.615850e-47 |
| Msa0195710 | Msa1433220 | 0.842922 | 1.923511e-58 | -8.615850e-47 |
| Msa0195710 | Msa1437330 | 0.800448 | 1.434554e-48 | -8.615850e-47 |
| Msa0195710 | Msa1445220 | 0.816723 | 4.774973e-52 | -8.615850e-47 |
| Msa0195710 | Msa1458030 | 0.800895 | 1.162826e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195710 | MtrunA17_Chr2g0286891 | 98.295 | 880 | 15 | 0 | 1 | 880 | 1 | 880 | 0.0 | 1767 |
| Msa0195710 | MtrunA17_Chr1g0196471 | 33.938 | 772 | 381 | 19 | 117 | 877 | 75 | 728 | 2.57e-110 | 355 |
| Msa0195710 | MtrunA17_Chr4g0054731 | 42.297 | 357 | 193 | 4 | 519 | 875 | 389 | 732 | 2.29e-70 | 247 |
| Msa0195710 | MtrunA17_Chr4g0054731 | 43.624 | 149 | 62 | 2 | 118 | 245 | 77 | 224 | 5.30e-30 | 127 |
| Msa0195710 | MtrunA17_Chr4g0064071 | 40.667 | 150 | 52 | 1 | 519 | 668 | 126 | 238 | 1.00e-20 | 92.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0195710 | AT4G03000.1 | 37.320 | 903 | 435 | 20 | 5 | 879 | 14 | 813 | 7.08e-156 | 478 |
| Msa0195710 | AT4G03000.2 | 37.320 | 903 | 435 | 20 | 5 | 879 | 14 | 813 | 7.08e-156 | 478 |
| Msa0195710 | AT1G03365.1 | 37.614 | 880 | 454 | 20 | 15 | 880 | 24 | 822 | 2.83e-145 | 450 |
| Msa0195710 | AT1G03365.2 | 37.614 | 880 | 454 | 20 | 15 | 880 | 24 | 822 | 2.83e-145 | 450 |
| Msa0195710 | AT4G03000.4 | 34.716 | 723 | 345 | 19 | 5 | 699 | 14 | 637 | 5.92e-94 | 310 |
| Msa0195710 | AT4G03000.6 | 34.716 | 723 | 345 | 19 | 5 | 699 | 14 | 637 | 5.92e-94 | 310 |
| Msa0195710 | AT4G03000.3 | 34.716 | 723 | 345 | 19 | 5 | 699 | 14 | 637 | 2.22e-93 | 309 |
| Msa0195710 | AT4G03000.5 | 34.716 | 723 | 345 | 19 | 5 | 699 | 14 | 637 | 4.14e-93 | 309 |
| Msa0195710 | AT2G35330.2 | 41.341 | 358 | 192 | 5 | 522 | 875 | 363 | 706 | 5.62e-73 | 254 |
| Msa0195710 | AT2G35330.2 | 43.038 | 158 | 76 | 4 | 118 | 264 | 71 | 225 | 2.72e-28 | 122 |
| Msa0195710 | AT2G35330.1 | 41.341 | 358 | 192 | 5 | 522 | 875 | 390 | 733 | 6.35e-73 | 254 |
| Msa0195710 | AT2G35330.1 | 43.038 | 158 | 76 | 4 | 118 | 264 | 98 | 252 | 3.87e-28 | 122 |
| Msa0195710 | AT1G32530.1 | 36.798 | 356 | 207 | 5 | 524 | 875 | 365 | 706 | 1.53e-50 | 190 |
| Msa0195710 | AT1G32530.1 | 39.259 | 135 | 75 | 1 | 118 | 245 | 69 | 203 | 1.45e-23 | 107 |
Find 199 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGCACTCTTTAAGTTTA+TGG | 0.104247 | 2_1:+12591503 | None:intergenic |
| TATATTCCCAATTGCTTATA+AGG | 0.172965 | 2_1:-12593894 | None:intergenic |
| GTCGAAATTACCCCATGTTT+TGG | 0.242112 | 2_1:-12592536 | Msa0195710:CDS |
| TTGATTTGTTTGCAGCTAAA+TGG | 0.242428 | 2_1:-12592729 | Msa0195710:intron |
| TCGCTGCATAAACTACTTAA+AGG | 0.246936 | 2_1:+12591969 | None:intergenic |
| GATCTGAATGCATTATTCTA+TGG | 0.247944 | 2_1:+12589484 | None:intergenic |
| CCCATGATTGAAACTTCATT+TGG | 0.283994 | 2_1:+12590743 | None:intergenic |
| AGAAGTTGAACGACTTAAAA+AGG | 0.284434 | 2_1:-12590980 | Msa0195710:CDS |
| TAGCTTCAAGGACACGAAAA+AGG | 0.285731 | 2_1:-12589831 | Msa0195710:CDS |
| TCGGTTTCTGTTCAAGAAAA+AGG | 0.294425 | 2_1:-12592668 | Msa0195710:CDS |
| TGCAAGATTGTCCTTCTTGC+AGG | 0.326643 | 2_1:-12589607 | Msa0195710:CDS |
| TTCAGGGCTGATCCACCTTT+AGG | 0.327941 | 2_1:-12592626 | Msa0195710:CDS |
| TTAATAGCCTTATAAGCAAT+TGG | 0.329372 | 2_1:+12593887 | None:intergenic |
| TGAAGATGGTTCCGAGGGTT+CGG | 0.332368 | 2_1:-12591119 | Msa0195710:CDS |
| CAGGGGAGATTGAGAGGTTC+CGG | 0.337931 | 2_1:+12591725 | None:intergenic |
| CAATTTGATCCTCTCCTCCT+TGG | 0.339110 | 2_1:+12589988 | None:intergenic |
| AGAATAATGCATTCAGATCT+TGG | 0.340113 | 2_1:-12589480 | Msa0195710:three_prime_UTR |
| GTCCATTATTAGATGAGAAA+TGG | 0.349080 | 2_1:+12591427 | None:intergenic |
| TTGTGCTATGTGTTGAGCTT+GGG | 0.352708 | 2_1:+12593858 | None:intergenic |
| ACCCATTTCTCATCTAATAA+TGG | 0.356305 | 2_1:-12591429 | Msa0195710:CDS |
| CCATGATTGAAACTTCATTT+GGG | 0.356844 | 2_1:+12590744 | None:intergenic |
| TCAGGGCTGATCCACCTTTA+GGG | 0.358652 | 2_1:-12592625 | Msa0195710:CDS |
| GTAGAAATAAGAGAAAATTC+AGG | 0.361206 | 2_1:-12592643 | Msa0195710:CDS |
| GAATTACATCTTGGCCGAAT+TGG | 0.379171 | 2_1:-12592099 | Msa0195710:CDS |
| GAATCAGAAATCGTTGTTAC+AGG | 0.382061 | 2_1:-12590719 | Msa0195710:CDS |
| TCAAATTCGCGGTGGACTCT+TGG | 0.382780 | 2_1:-12591802 | Msa0195710:CDS |
| GAAGATGGTTCCGAGGGTTC+GGG | 0.388461 | 2_1:-12591118 | Msa0195710:CDS |
| CTTGCATTCCCTGCTTCTCA+TGG | 0.393218 | 2_1:+12589624 | None:intergenic |
| TCTCTTTCATTGTCTTCAAA+AGG | 0.400450 | 2_1:-12591264 | Msa0195710:CDS |
| CAAGGAGGAGAGGATCAAAT+TGG | 0.404486 | 2_1:-12589987 | Msa0195710:CDS |
| GACAAGTCATCTAATGCTTC+CGG | 0.404497 | 2_1:-12591744 | Msa0195710:CDS |
| TCTGTAGCTGATAATGCATC+TGG | 0.405226 | 2_1:+12591297 | None:intergenic |
| GATTTCTCAGATTGAGTGCC+TGG | 0.408635 | 2_1:+12591843 | None:intergenic |
| TAGAATCCAGGCTAAATGTT+GGG | 0.410933 | 2_1:+12591397 | None:intergenic |
| TTAAGACCTGGCATCTGTTA+TGG | 0.412665 | 2_1:-12592233 | Msa0195710:CDS |
| AGGCTAAATGTTGGGGTAGA+TGG | 0.414356 | 2_1:+12591405 | None:intergenic |
| TTCTGAGATGGAAAATGCCT+TGG | 0.415309 | 2_1:-12590920 | Msa0195710:CDS |
| ATTGTATTACTGAGATTTAG+AGG | 0.418899 | 2_1:-12593406 | Msa0195710:intron |
| GGACTACTGACTGCTGGTAT+AGG | 0.422320 | 2_1:+12591321 | None:intergenic |
| CTGCAGTTTCATCTGAGGTC+AGG | 0.425266 | 2_1:-12592433 | Msa0195710:CDS |
| TTTGTGCTATGTGTTGAGCT+TGG | 0.430969 | 2_1:+12593857 | None:intergenic |
| CAGCAGAGAATTCATAACTT+AGG | 0.431980 | 2_1:+12592564 | None:intergenic |
| TTCTTGCAGGAGCCCCATCC+AGG | 0.433423 | 2_1:-12589594 | Msa0195710:CDS |
| TAACAGTCAAATGTCTTCTT+CGG | 0.438296 | 2_1:-12592687 | Msa0195710:CDS |
| TAATAGCCTTATAAGCAATT+GGG | 0.440927 | 2_1:+12593888 | None:intergenic |
| AGATGAGTTGATTCTGAAGA+TGG | 0.442092 | 2_1:-12591133 | Msa0195710:CDS |
| CCCAAATGAAGTTTCAATCA+TGG | 0.443366 | 2_1:-12590744 | Msa0195710:CDS |
| AAGCTATGCCGGTAGCTTCA+AGG | 0.448095 | 2_1:-12589843 | Msa0195710:CDS |
| ATGCATTCAGATCTTGGATC+TGG | 0.448154 | 2_1:-12589474 | Msa0195710:three_prime_UTR |
| CGCTGCATAAACTACTTAAA+GGG | 0.448414 | 2_1:+12591970 | None:intergenic |
| TATAAACATAAGCAAGGCAG+TGG | 0.448971 | 2_1:-12591481 | Msa0195710:CDS |
| ACAGAAATTCGCTCCTGGAT+GGG | 0.450372 | 2_1:+12589581 | None:intergenic |
| TGTCTCATGGACTTGTCATA+TGG | 0.455279 | 2_1:+12591177 | None:intergenic |
| TTGAAGACAATGAAAGAGAA+AGG | 0.455334 | 2_1:+12591268 | None:intergenic |
| CAGAAATTCGCTCCTGGATG+GGG | 0.459004 | 2_1:+12589582 | None:intergenic |
| CGAGCTTCAGAATTACATCT+TGG | 0.459109 | 2_1:-12592108 | Msa0195710:CDS |
| CACCGCGTCTATTTCAGAAC+TGG | 0.460689 | 2_1:-12589786 | Msa0195710:CDS |
| GGCTGCTCGTCGACTGAGTA+AGG | 0.463847 | 2_1:-12591040 | Msa0195710:CDS |
| TTGAAGAACGCAAACCAATT+CGG | 0.464489 | 2_1:+12592085 | None:intergenic |
| TTGAGTCCCATGGCGCTGAT+TGG | 0.468361 | 2_1:-12592379 | Msa0195710:CDS |
| ACTTGTTATTACAGCAGATA+GGG | 0.468592 | 2_1:+12591226 | None:intergenic |
| TATCGGACATACGGGTCTAA+AGG | 0.468738 | 2_1:-12591606 | Msa0195710:CDS |
| TCCATTATTAGATGAGAAAT+GGG | 0.470325 | 2_1:+12591428 | None:intergenic |
| ATCGGACATACGGGTCTAAA+GGG | 0.472374 | 2_1:-12591605 | Msa0195710:CDS |
| CAATGAGCTCCATGAGAAGC+AGG | 0.473165 | 2_1:-12589633 | Msa0195710:CDS |
| ATCTACCCCAACATTTAGCC+TGG | 0.474786 | 2_1:-12591403 | Msa0195710:CDS |
| GATGGCTTGAAGCTCGACCT+TGG | 0.477990 | 2_1:-12592467 | Msa0195710:CDS |
| TTTCGTGTCCTTGAAGCTAC+CGG | 0.478278 | 2_1:+12589835 | None:intergenic |
| TGGTTTGAGTGGTTTAATCC+TGG | 0.479762 | 2_1:-12591559 | Msa0195710:CDS |
| CCCTCTTGGTGCTACTCGAA+TGG | 0.480575 | 2_1:+12591670 | None:intergenic |
| GGAATTGAATTACAAGGACT+TGG | 0.484319 | 2_1:+12591867 | None:intergenic |
| GATCAAATTGGAAGCGGAGA+AGG | 0.484375 | 2_1:-12589975 | Msa0195710:CDS |
| GACTTGTTATTACAGCAGAT+AGG | 0.486606 | 2_1:+12591225 | None:intergenic |
| TTTGCGTTCTTCAAGAGGTT+AGG | 0.489276 | 2_1:-12592076 | Msa0195710:CDS |
| GTTAGCCACGGTTGTTCTGA+TGG | 0.489726 | 2_1:-12592485 | Msa0195710:CDS |
| TTCTGAAATAGACGCGGTGT+GGG | 0.490115 | 2_1:+12589790 | None:intergenic |
| GGCAAATCAAAAGGTGATGC+AGG | 0.491344 | 2_1:-12591061 | Msa0195710:CDS |
| GACAGAGTGGGCAAATCAAA+AGG | 0.495082 | 2_1:-12591070 | Msa0195710:CDS |
| TCTGAGATGGAAAATGCCTT+GGG | 0.495498 | 2_1:-12590919 | Msa0195710:CDS |
| CACAGAAATTCGCTCCTGGA+TGG | 0.502512 | 2_1:+12589580 | None:intergenic |
| CTCTTACTTGACTCCCCTAA+AGG | 0.502873 | 2_1:+12592611 | None:intergenic |
| AAAATGCGGGATTGTTAGAA+AGG | 0.503581 | 2_1:-12591694 | Msa0195710:CDS |
| TAGAAATAAGAGAAAATTCA+GGG | 0.503963 | 2_1:-12592642 | Msa0195710:CDS |
| TGCAAAATGAACTTCAAGAA+TGG | 0.504403 | 2_1:-12591092 | Msa0195710:CDS |
| ATCACAGGCTAAACGGCGGC+AGG | 0.504970 | 2_1:-12590092 | Msa0195710:intron |
| CAGGGCTGATCCACCTTTAG+GGG | 0.505454 | 2_1:-12592624 | Msa0195710:CDS |
| GAACGGAGGAGGTGTGAAAC+GGG | 0.507987 | 2_1:-12589738 | Msa0195710:CDS |
| ATATATTACTTTCAATGCAA+AGG | 0.510068 | 2_1:-12589437 | Msa0195710:three_prime_UTR |
| ATCTGAATGCATTATTCTAT+GGG | 0.513965 | 2_1:+12589485 | None:intergenic |
| CTGACCTCAGATGAAACTGC+AGG | 0.516905 | 2_1:+12592434 | None:intergenic |
| ATCACTCCAATCAGCGCCAT+GGG | 0.517228 | 2_1:+12592373 | None:intergenic |
| CCAAATGAAGTTTCAATCAT+GGG | 0.518136 | 2_1:-12590743 | Msa0195710:CDS |
| CTTCTAATTCCTCCTTAGGC+TGG | 0.519710 | 2_1:+12592405 | None:intergenic |
| GAGGAGGTGTGAAACGGGAA+AGG | 0.521023 | 2_1:-12589733 | Msa0195710:CDS |
| GGAATCGATGGAAGCTATGC+CGG | 0.523339 | 2_1:-12589854 | Msa0195710:CDS |
| GAAAATGCCTTGGGTAAAGC+AGG | 0.524830 | 2_1:-12590910 | Msa0195710:CDS |
| AACGCACAGAAATTCGCTCC+TGG | 0.525525 | 2_1:+12589576 | None:intergenic |
| AGGAGGTGTGAAACGGGAAA+GGG | 0.525773 | 2_1:-12589732 | Msa0195710:CDS |
| TTGCAGCTAAATGGCATCAC+TGG | 0.527853 | 2_1:-12592720 | Msa0195710:intron |
| CTGTAGCTGATAATGCATCT+GGG | 0.529420 | 2_1:+12591298 | None:intergenic |
| AGTTTATGCAGCGATGGCAT+TGG | 0.532146 | 2_1:-12591960 | Msa0195710:CDS |
| TCACATAGTAGTAGTTGTGT+GGG | 0.533038 | 2_1:-12591204 | Msa0195710:CDS |
| TGAACGGAGGAGGTGTGAAA+CGG | 0.533156 | 2_1:-12589739 | Msa0195710:CDS |
| TGCAGCGATGGCATTGGTGA+TGG | 0.533644 | 2_1:-12591954 | Msa0195710:CDS |
| ATTTCTCAGATTGAGTGCCT+GGG | 0.536057 | 2_1:+12591844 | None:intergenic |
| CTAGAATCCAGGCTAAATGT+TGG | 0.536588 | 2_1:+12591396 | None:intergenic |
| TTAAATAACTTCTCTATGAA+CGG | 0.538843 | 2_1:-12589755 | Msa0195710:CDS |
| CACTGAAGATGTTGCTACAA+AGG | 0.538959 | 2_1:-12592261 | Msa0195710:CDS |
| GGAAAGCTGAGTGGTTTGAG+TGG | 0.539286 | 2_1:-12591570 | Msa0195710:CDS |
| TTGGGGCAACCATTGTCTCA+TGG | 0.541430 | 2_1:+12591164 | None:intergenic |
| AAGAGAACAAATTGAGGAGT+CGG | 0.541615 | 2_1:-12590017 | Msa0195710:CDS |
| TGTGCTATGTGTTGAGCTTG+GGG | 0.543136 | 2_1:+12593859 | None:intergenic |
| GCTGTGACTTGCCCAAAACA+TGG | 0.543592 | 2_1:+12592524 | None:intergenic |
| AAATAGTATCACTAGAATCC+AGG | 0.544420 | 2_1:+12591385 | None:intergenic |
| GGTCAGGCTTAGCCAGCCTA+AGG | 0.548390 | 2_1:-12592417 | Msa0195710:CDS |
| AACAGAAGAACTTCTCTCCA+TGG | 0.554042 | 2_1:-12590059 | Msa0195710:CDS |
| TGAGGAGTCGGCTAGAACCA+AGG | 0.554113 | 2_1:-12590005 | Msa0195710:CDS |
| AAAAGAAAGAGAACAAATTG+AGG | 0.556625 | 2_1:-12590023 | Msa0195710:CDS |
| TTGAAGCAGGGGAGATTGAG+AGG | 0.557801 | 2_1:+12591719 | None:intergenic |
| AACTTCTCTATGAACGGAGG+AGG | 0.562509 | 2_1:-12589749 | Msa0195710:CDS |
| ATTGGTTTGCGTTCTTCAAG+AGG | 0.562855 | 2_1:-12592081 | Msa0195710:CDS |
| AGGCTGAGCTTAAGACACTA+AGG | 0.563919 | 2_1:-12591014 | Msa0195710:CDS |
| CTGTGACTTGCCCAAAACAT+GGG | 0.565277 | 2_1:+12592525 | None:intergenic |
| AGTGCAAGCGGAGCAATTCG+AGG | 0.565932 | 2_1:-12590635 | Msa0195710:intron |
| TTGCATCCATAACAGATGCC+AGG | 0.570859 | 2_1:+12592227 | None:intergenic |
| ACCACTTCTAATTCCTCCTT+AGG | 0.570887 | 2_1:+12592401 | None:intergenic |
| GTCACATAGTAGTAGTTGTG+TGG | 0.572984 | 2_1:-12591205 | Msa0195710:CDS |
| GGAGAGGATCAAATTGGAAG+CGG | 0.573756 | 2_1:-12589981 | Msa0195710:CDS |
| CGGCTAGAACCAAGGAGGAG+AGG | 0.575165 | 2_1:-12589997 | Msa0195710:CDS |
| TTAAAATAGTGCTCTCGTGA+AGG | 0.587307 | 2_1:+12592140 | None:intergenic |
| GATCACTCCAATCAGCGCCA+TGG | 0.587469 | 2_1:+12592372 | None:intergenic |
| TGCAGTACGGAAGCTCGAGA+TGG | 0.587948 | 2_1:-12590863 | Msa0195710:CDS |
| TTAGAAGTGGTTGAGTCCCA+TGG | 0.588976 | 2_1:-12592389 | Msa0195710:CDS |
| CTTGTTATTACAGCAGATAG+GGG | 0.590136 | 2_1:+12591227 | None:intergenic |
| TTGTCCACCTGCTTTACCCA+AGG | 0.591973 | 2_1:+12590903 | None:intergenic |
| TGGATGGGGCTCCTGCAAGA+AGG | 0.592363 | 2_1:+12589596 | None:intergenic |
| TGCTGCATTGAGGAAAGAGA+TGG | 0.592537 | 2_1:-12590836 | Msa0195710:CDS |
| TTAAGTAGTTTATGCAGCGA+TGG | 0.592929 | 2_1:-12591966 | Msa0195710:CDS |
| CAGGCTTAGCCAGCCTAAGG+AGG | 0.593792 | 2_1:-12592414 | Msa0195710:CDS |
| ATCAGCAACAAACTTTCAAG+AGG | 0.595207 | 2_1:-12590788 | Msa0195710:CDS |
| AAAGCAAGCCGAAGTGCAAG+CGG | 0.595548 | 2_1:-12590647 | Msa0195710:CDS |
| GACTTGTGCACTGTTAGCCA+CGG | 0.596382 | 2_1:-12592497 | Msa0195710:CDS |
| GGGTAAAGCAGGTGGACAAG+TGG | 0.599397 | 2_1:-12590899 | Msa0195710:CDS |
| GTTCTGAAATAGACGCGGTG+TGG | 0.599691 | 2_1:+12589789 | None:intergenic |
| GGAGTGTGTGATGTGCCTTT+CGG | 0.601614 | 2_1:-12589711 | Msa0195710:CDS |
| CAAGATGTAATTCTGAAGCT+CGG | 0.607013 | 2_1:+12592109 | None:intergenic |
| GCAGAAAATTCTCAAATTCG+CGG | 0.611943 | 2_1:-12591813 | Msa0195710:CDS |
| TGATTCTGAAGATGGTTCCG+AGG | 0.613147 | 2_1:-12591125 | Msa0195710:CDS |
| CGTGTCACATGCTTGTGCAA+TGG | 0.613972 | 2_1:-12592000 | Msa0195710:CDS |
| TTTCTCAGATTGAGTGCCTG+GGG | 0.616223 | 2_1:+12591845 | None:intergenic |
| GCTATGTGTTGAGCTTGGGG+AGG | 0.616848 | 2_1:+12593862 | None:intergenic |
| AGAATCCAGGCTAAATGTTG+GGG | 0.617379 | 2_1:+12591398 | None:intergenic |
| CTGCAGGGCTAGATAATCCA+AGG | 0.619620 | 2_1:+12592450 | None:intergenic |
| GATTCTGAAGATGGTTCCGA+GGG | 0.620356 | 2_1:-12591124 | Msa0195710:CDS |
| GCCTAAGGAGGAATTAGAAG+TGG | 0.621473 | 2_1:-12592402 | Msa0195710:CDS |
| TAGCCCTGCAGTTTCATCTG+AGG | 0.622105 | 2_1:-12592438 | Msa0195710:CDS |
| TCACATGCTTGTGCAATGGA+TGG | 0.625176 | 2_1:-12591996 | Msa0195710:CDS |
| TGTAGCTGATAATGCATCTG+GGG | 0.627271 | 2_1:+12591299 | None:intergenic |
| AGATGGAGAATGCTGCATTG+AGG | 0.628423 | 2_1:-12590846 | Msa0195710:CDS |
| TGCTTCTATAAACATAAGCA+AGG | 0.629751 | 2_1:-12591487 | Msa0195710:CDS |
| TTACTTGACTCCCCTAAAGG+TGG | 0.630430 | 2_1:+12592614 | None:intergenic |
| CAAATTGGCACAGATATCGA+AGG | 0.631352 | 2_1:-12590674 | Msa0195710:CDS |
| ATGACAAGTCCATGAGACAA+TGG | 0.637572 | 2_1:-12591173 | Msa0195710:CDS |
| CAAACAACTTGATGTGCACA+TGG | 0.640114 | 2_1:+12589665 | None:intergenic |
| AACTTCAAGAATGGACAGAG+TGG | 0.640249 | 2_1:-12591083 | Msa0195710:CDS |
| ATGGCATCACTGGTTGTCAG+TGG | 0.643711 | 2_1:-12592710 | Msa0195710:CDS |
| CCATTCGAGTAGCACCAAGA+GGG | 0.645720 | 2_1:-12591670 | Msa0195710:CDS |
| GGGTCTAAAGGGTCTTCAAG+AGG | 0.646096 | 2_1:-12591594 | Msa0195710:CDS |
| GAATTGCTCCGCTTGCACTT+CGG | 0.649365 | 2_1:+12590639 | None:intergenic |
| AATGCCTTGGGTAAAGCAGG+TGG | 0.652750 | 2_1:-12590907 | Msa0195710:CDS |
| TCCATTCGAGTAGCACCAAG+AGG | 0.654219 | 2_1:-12591671 | Msa0195710:CDS |
| ACTTCAAGAATGGACAGAGT+GGG | 0.655947 | 2_1:-12591082 | Msa0195710:CDS |
| ATAAACATAAGCAAGGCAGT+GGG | 0.657479 | 2_1:-12591480 | Msa0195710:CDS |
| TGACCTCAGATGAAACTGCA+GGG | 0.658780 | 2_1:+12592435 | None:intergenic |
| TGTGACTTGCCCAAAACATG+GGG | 0.662318 | 2_1:+12592526 | None:intergenic |
| TAAGATCGATCTTAGAACAT+CGG | 0.662677 | 2_1:+12593756 | None:intergenic |
| TCTAAAGGGTCTTCAAGAGG+AGG | 0.662790 | 2_1:-12591591 | Msa0195710:CDS |
| CAACAGACATCTCTTCCGAA+AGG | 0.663930 | 2_1:+12589696 | None:intergenic |
| AACGAGCTAATACTGCAGTA+CGG | 0.665440 | 2_1:-12590876 | Msa0195710:CDS |
| ACAAAGGCTATGTTAAGACC+TGG | 0.665472 | 2_1:-12592245 | Msa0195710:CDS |
| TTCTCAGATTGAGTGCCTGG+GGG | 0.666069 | 2_1:+12591846 | None:intergenic |
| TCAGTTTCGGAGATGCAATG+TGG | 0.669957 | 2_1:-12592046 | Msa0195710:CDS |
| TCTGAAATAGACGCGGTGTG+GGG | 0.671611 | 2_1:+12589791 | None:intergenic |
| GAAAATTCTCAAATTCGCGG+TGG | 0.674479 | 2_1:-12591810 | Msa0195710:CDS |
| TCAATCTGAGAAATCCGTTG+TGG | 0.679156 | 2_1:-12591835 | Msa0195710:CDS |
| AATGAGCTCCATGAGAAGCA+GGG | 0.679279 | 2_1:-12589632 | Msa0195710:CDS |
| TCGTCGACTGAGTAAGGACA+AGG | 0.681425 | 2_1:-12591034 | Msa0195710:CDS |
| TGCATTGAGGAAAGAGATGG+AGG | 0.682188 | 2_1:-12590833 | Msa0195710:CDS |
| CACATAGTAGTAGTTGTGTG+GGG | 0.682224 | 2_1:-12591203 | Msa0195710:CDS |
| GGAGGCTGCTAAGTTACGTG+CGG | 0.686850 | 2_1:-12590815 | Msa0195710:CDS |
| AACCAGTTCTGAAATAGACG+CGG | 0.688246 | 2_1:+12589784 | None:intergenic |
| TCAAGAGGAGGAAAGCTGAG+TGG | 0.691060 | 2_1:-12591579 | Msa0195710:CDS |
| GTAGCTGATAATGCATCTGG+GGG | 0.692281 | 2_1:+12591300 | None:intergenic |
| AATAACTTCTCTATGAACGG+AGG | 0.693247 | 2_1:-12589752 | Msa0195710:CDS |
| TCAAGCCATCAGAACAACCG+TGG | 0.719058 | 2_1:+12592480 | None:intergenic |
| TCGTCAGAAGTCAATCCACG+TGG | 0.728301 | 2_1:-12591637 | Msa0195710:CDS |
| AAATATCACAGGCTAAACGG+CGG | 0.736276 | 2_1:-12590096 | Msa0195710:intron |
| ATTATTCTATGGGAGTCCCG+AGG | 0.739410 | 2_1:+12589495 | None:intergenic |
| GGAGTCGGCTAGAACCAAGG+AGG | 0.754094 | 2_1:-12590002 | Msa0195710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAAAATAAAATAAACAG+AGG | - | chr2_1:12589470-12589489 | Msa0195710:three_prime_UTR | 15.0% |
| !!! | GAAAAATCAATGTTTTTTTT+AGG | + | chr2_1:12589521-12589540 | None:intergenic | 15.0% |
| !! | TTATGTAATTGAATTCAATT+GGG | - | chr2_1:12589745-12589764 | Msa0195710:CDS | 15.0% |
| !!! | AGTTTTTAATTTTTTTCAAC+TGG | - | chr2_1:12589775-12589794 | Msa0195710:CDS | 15.0% |
| !!! | GTTTTTAATTTTTTTCAACT+GGG | - | chr2_1:12589776-12589795 | Msa0195710:CDS | 15.0% |
| !!! | AAATTTTCATATAACTACTT+AGG | + | chr2_1:12592937-12592956 | None:intergenic | 15.0% |
| !! | GTTATGTAATTGAATTCAAT+TGG | - | chr2_1:12589744-12589763 | Msa0195710:CDS | 20.0% |
| !!! | TTTTTTAATCTGATTGTTTC+AGG | - | chr2_1:12589863-12589882 | Msa0195710:CDS | 20.0% |
| !!! | ATAATGCTATCAAATTTGTT+GGG | - | chr2_1:12590032-12590051 | Msa0195710:CDS | 20.0% |
| !! | TAGAAATAAGAGAAAATTCA+GGG | - | chr2_1:12590666-12590685 | Msa0195710:CDS | 20.0% |
| !!! | ATAAAAAAAATTGTTGCTTG+TGG | - | chr2_1:12591021-12591040 | Msa0195710:CDS | 20.0% |
| !! | AAAAGCTGAAATAAAAAGTT+CGG | - | chr2_1:12591407-12591426 | Msa0195710:CDS | 20.0% |
| !! | AATGACTGAAAAAAACAAAT+TGG | - | chr2_1:12592619-12592638 | Msa0195710:CDS | 20.0% |
| !! | TAAATGTTGGTATTAATATC+TGG | + | chr2_1:12592750-12592769 | None:intergenic | 20.0% |
| !! | ATATAACTACTTAGGTATAA+AGG | + | chr2_1:12592929-12592948 | None:intergenic | 20.0% |
| !! | GTAATATTAAATGAATCACT+TGG | - | chr2_1:12593089-12593108 | Msa0195710:intron | 20.0% |
| !! | TTAAATAACTTCTCTATGAA+CGG | - | chr2_1:12593553-12593572 | Msa0195710:intron | 20.0% |
| !! | ATATATTACTTTCAATGCAA+AGG | - | chr2_1:12593871-12593890 | Msa0195710:five_prime_UTR | 20.0% |
| !!! | TAATAGCCTTATAAGCAATT+GGG | + | chr2_1:12589423-12589442 | None:intergenic | 25.0% |
| !!! | TTAATAGCCTTATAAGCAAT+TGG | + | chr2_1:12589424-12589443 | None:intergenic | 25.0% |
| !! | GTTTGTCAATTTTCTTCAAT+CGG | - | chr2_1:12589584-12589603 | Msa0195710:CDS | 25.0% |
| !! | TTTGTCAATTTTCTTCAATC+GGG | - | chr2_1:12589585-12589604 | Msa0195710:CDS | 25.0% |
| !! | ACTCTGAATTTTTCTTCAAT+TGG | - | chr2_1:12589641-12589660 | Msa0195710:CDS | 25.0% |
| !! | CTCTGAATTTTTCTTCAATT+GGG | - | chr2_1:12589642-12589661 | Msa0195710:CDS | 25.0% |
| !! | TCTGAATTTTTCTTCAATTG+GGG | - | chr2_1:12589643-12589662 | Msa0195710:CDS | 25.0% |
| ! | ATTGTATTACTGAGATTTAG+AGG | - | chr2_1:12589902-12589921 | Msa0195710:CDS | 25.0% |
| ! | GCATTATCAATCAACAAAAA+GGG | + | chr2_1:12590019-12590038 | None:intergenic | 25.0% |
| ! | AGCATTATCAATCAACAAAA+AGG | + | chr2_1:12590020-12590039 | None:intergenic | 25.0% |
| ! | GATAATGCTATCAAATTTGT+TGG | - | chr2_1:12590031-12590050 | Msa0195710:CDS | 25.0% |
| ! | TCTTTCAAGCTATGTAAATA+TGG | - | chr2_1:12590491-12590510 | Msa0195710:intron | 25.0% |
| !!! | AATCACAAGTTGATTAGTTT+CGG | + | chr2_1:12590518-12590537 | None:intergenic | 25.0% |
| ! | GTAGAAATAAGAGAAAATTC+AGG | - | chr2_1:12590665-12590684 | Msa0195710:CDS | 25.0% |
| !! | TTTTATTGCACTCTTGAAAA+TGG | + | chr2_1:12591007-12591026 | None:intergenic | 25.0% |
| !!! | CTGATTTAAGTTTTTTATCC+AGG | + | chr2_1:12591770-12591789 | None:intergenic | 25.0% |
| ! | TCCATTATTAGATGAGAAAT+GGG | + | chr2_1:12591883-12591902 | None:intergenic | 25.0% |
| ! | TTGTAAAGGAAAAATATCAC+AGG | - | chr2_1:12593201-12593220 | Msa0195710:intron | 25.0% |
| ! | AAAAGAAAGAGAACAAATTG+AGG | - | chr2_1:12593285-12593304 | Msa0195710:intron | 25.0% |
| !!! | CAATTTCTTTTTCAAGTTTC+TGG | + | chr2_1:12593384-12593403 | None:intergenic | 25.0% |
| ! | ATCTGAATGCATTATTCTAT+GGG | + | chr2_1:12593826-12593845 | None:intergenic | 25.0% |
| TAAGATCGATCTTAGAACAT+CGG | + | chr2_1:12589555-12589574 | None:intergenic | 30.0% | |
| ! | AGATTACTTGTGCATGTTTT+TGG | - | chr2_1:12589811-12589830 | Msa0195710:CDS | 30.0% |
| ! | GATTACTTGTGCATGTTTTT+GGG | - | chr2_1:12589812-12589831 | Msa0195710:CDS | 30.0% |
| TGGCAAAATGAAAATCAACA+AGG | + | chr2_1:12590064-12590083 | None:intergenic | 30.0% | |
| CAAGTACTATCAAAACGTAA+TGG | + | chr2_1:12590084-12590103 | None:intergenic | 30.0% | |
| !! | CATTACGTTTTGATAGTACT+TGG | - | chr2_1:12590082-12590101 | Msa0195710:CDS | 30.0% |
| !! | GTTTTGATAGTACTTGGTTT+TGG | - | chr2_1:12590088-12590107 | Msa0195710:CDS | 30.0% |
| !! | ATCACAAGTTGATTAGTTTC+GGG | + | chr2_1:12590517-12590536 | None:intergenic | 30.0% |
| !! | TTGATTTGTTTGCAGCTAAA+TGG | - | chr2_1:12590579-12590598 | Msa0195710:intron | 30.0% |
| TAACAGTCAAATGTCTTCTT+CGG | - | chr2_1:12590621-12590640 | Msa0195710:intron | 30.0% | |
| !!! | ACTTTAGCTCTTTTGAGAAA+CGG | - | chr2_1:12591132-12591151 | Msa0195710:CDS | 30.0% |
| GAAAAAAGTTATCGGACATA+CGG | - | chr2_1:12591693-12591712 | Msa0195710:CDS | 30.0% | |
| AAAAAAGTTATCGGACATAC+GGG | - | chr2_1:12591694-12591713 | Msa0195710:CDS | 30.0% | |
| !! | AGAAGCACTCTTTAAGTTTA+TGG | + | chr2_1:12591808-12591827 | None:intergenic | 30.0% |
| TGCTTCTATAAACATAAGCA+AGG | - | chr2_1:12591821-12591840 | Msa0195710:CDS | 30.0% | |
| ACCCATTTCTCATCTAATAA+TGG | - | chr2_1:12591879-12591898 | Msa0195710:CDS | 30.0% | |
| GTCCATTATTAGATGAGAAA+TGG | + | chr2_1:12591884-12591903 | None:intergenic | 30.0% | |
| AAATAGTATCACTAGAATCC+AGG | + | chr2_1:12591926-12591945 | None:intergenic | 30.0% | |
| TTGAAGACAATGAAAGAGAA+AGG | + | chr2_1:12592043-12592062 | None:intergenic | 30.0% | |
| TCTCTTTCATTGTCTTCAAA+AGG | - | chr2_1:12592044-12592063 | Msa0195710:CDS | 30.0% | |
| !! | ACTTGTTATTACAGCAGATA+GGG | + | chr2_1:12592085-12592104 | None:intergenic | 30.0% |
| ! | AACTCATCTTTTCTATCTTG+GGG | + | chr2_1:12592164-12592183 | None:intergenic | 30.0% |
| ! | CAACTCATCTTTTCTATCTT+GGG | + | chr2_1:12592165-12592184 | None:intergenic | 30.0% |
| ! | TCAACTCATCTTTTCTATCT+TGG | + | chr2_1:12592166-12592185 | None:intergenic | 30.0% |
| TGCAAAATGAACTTCAAGAA+TGG | - | chr2_1:12592216-12592235 | Msa0195710:CDS | 30.0% | |
| AGAAGTTGAACGACTTAAAA+AGG | - | chr2_1:12592328-12592347 | Msa0195710:CDS | 30.0% | |
| ! | TTTTCATGGTGTTTTCTTCA+AGG | + | chr2_1:12592364-12592383 | None:intergenic | 30.0% |
| CCATGATTGAAACTTCATTT+GGG | + | chr2_1:12592567-12592586 | None:intergenic | 30.0% | |
| CCAAATGAAGTTTCAATCAT+GGG | - | chr2_1:12592565-12592584 | Msa0195710:CDS | 30.0% | |
| TGAAAACAAATAACAGCATC+AGG | + | chr2_1:12592775-12592794 | None:intergenic | 30.0% | |
| !! | TGCTGTTATTTGTTTTCATG+TGG | - | chr2_1:12592777-12592796 | Msa0195710:intron | 30.0% |
| TACATGTTGGTATTAATACC+TGG | + | chr2_1:12592860-12592879 | None:intergenic | 30.0% | |
| AACATCATTTCCTTGTTGAA+TGG | - | chr2_1:12593062-12593081 | Msa0195710:intron | 30.0% | |
| ACATCATTTCCTTGTTGAAT+GGG | - | chr2_1:12593063-12593082 | Msa0195710:intron | 30.0% | |
| ! | CTTAATGAGTTTGTGTTACT+GGG | - | chr2_1:12593168-12593187 | Msa0195710:intron | 30.0% |
| GAAAAATATCACAGGCTAAA+CGG | - | chr2_1:12593209-12593228 | Msa0195710:intron | 30.0% | |
| AAAATTGCTGCACTAAAAAG+AGG | - | chr2_1:12593433-12593452 | Msa0195710:intron | 30.0% | |
| !! | AGTGTTTTGAATAATGTCCT+CGG | - | chr2_1:12593796-12593815 | Msa0195710:five_prime_UTR | 30.0% |
| GATCTGAATGCATTATTCTA+TGG | + | chr2_1:12593827-12593846 | None:intergenic | 30.0% | |
| AGAATAATGCATTCAGATCT+TGG | - | chr2_1:12593828-12593847 | Msa0195710:five_prime_UTR | 30.0% | |
| GTATAGCTGTCTAATGATGA+TGG | + | chr2_1:12590402-12590421 | None:intergenic | 35.0% | |
| TCGGTTTCTGTTCAAGAAAA+AGG | - | chr2_1:12590640-12590659 | Msa0195710:CDS | 35.0% | |
| CAGCAGAGAATTCATAACTT+AGG | + | chr2_1:12590747-12590766 | None:intergenic | 35.0% | |
| ! | TCGAAATTACCCCATGTTTT+GGG | - | chr2_1:12590773-12590792 | Msa0195710:CDS | 35.0% |
| TTAAAATAGTGCTCTCGTGA+AGG | + | chr2_1:12591171-12591190 | None:intergenic | 35.0% | |
| !! | CAAGATGTAATTCTGAAGCT+CGG | + | chr2_1:12591202-12591221 | None:intergenic | 35.0% |
| TTGAAGAACGCAAACCAATT+CGG | + | chr2_1:12591226-12591245 | None:intergenic | 35.0% | |
| !!! | GTTAGGCCATTTTTCAGTTT+CGG | - | chr2_1:12591249-12591268 | Msa0195710:CDS | 35.0% |
| CGCTGCATAAACTACTTAAA+GGG | + | chr2_1:12591341-12591360 | None:intergenic | 35.0% | |
| TCGCTGCATAAACTACTTAA+AGG | + | chr2_1:12591342-12591361 | None:intergenic | 35.0% | |
| TTAAGTAGTTTATGCAGCGA+TGG | - | chr2_1:12591342-12591361 | Msa0195710:CDS | 35.0% | |
| !! | CTTTTGATTGTGATTCAGTC+TGG | + | chr2_1:12591392-12591411 | None:intergenic | 35.0% |
| GGAATTGAATTACAAGGACT+TGG | + | chr2_1:12591444-12591463 | None:intergenic | 35.0% | |
| ! | TTGAGAATTTTCTGCCACAA+CGG | + | chr2_1:12591490-12591509 | None:intergenic | 35.0% |
| GCAGAAAATTCTCAAATTCG+CGG | - | chr2_1:12591495-12591514 | Msa0195710:CDS | 35.0% | |
| ! | GAAAAACAGAGTGCTAATTC+TGG | - | chr2_1:12591528-12591547 | Msa0195710:CDS | 35.0% |
| AAAATGCGGGATTGTTAGAA+AGG | - | chr2_1:12591614-12591633 | Msa0195710:CDS | 35.0% | |
| TCCACGTGGAAAAAAGTTAT+CGG | - | chr2_1:12591685-12591704 | Msa0195710:CDS | 35.0% | |
| TATAAACATAAGCAAGGCAG+TGG | - | chr2_1:12591827-12591846 | Msa0195710:CDS | 35.0% | |
| ATAAACATAAGCAAGGCAGT+GGG | - | chr2_1:12591828-12591847 | Msa0195710:CDS | 35.0% | |
| TAGAATCCAGGCTAAATGTT+GGG | + | chr2_1:12591914-12591933 | None:intergenic | 35.0% | |
| !! | CTTGTTATTACAGCAGATAG+GGG | + | chr2_1:12592084-12592103 | None:intergenic | 35.0% |
| !! | GACTTGTTATTACAGCAGAT+AGG | + | chr2_1:12592086-12592105 | None:intergenic | 35.0% |
| TCACATAGTAGTAGTTGTGT+GGG | - | chr2_1:12592104-12592123 | Msa0195710:CDS | 35.0% | |
| !! | AGATGAGTTGATTCTGAAGA+TGG | - | chr2_1:12592175-12592194 | Msa0195710:CDS | 35.0% |
| !!! | CATCTCAGAAAGCTTTTTCA+TGG | + | chr2_1:12592378-12592397 | None:intergenic | 35.0% |
| ! | CATGAAAAAGCTTTCTGAGA+TGG | - | chr2_1:12592376-12592395 | Msa0195710:CDS | 35.0% |
| ATCAGCAACAAACTTTCAAG+AGG | - | chr2_1:12592520-12592539 | Msa0195710:CDS | 35.0% | |
| CCCAAATGAAGTTTCAATCA+TGG | - | chr2_1:12592564-12592583 | Msa0195710:CDS | 35.0% | |
| CCCATGATTGAAACTTCATT+TGG | + | chr2_1:12592568-12592587 | None:intergenic | 35.0% | |
| GAATCAGAAATCGTTGTTAC+AGG | - | chr2_1:12592589-12592608 | Msa0195710:CDS | 35.0% | |
| ACAGCATCAGGAATAAATGT+TGG | + | chr2_1:12592763-12592782 | None:intergenic | 35.0% | |
| CAAAGCAGTTGGAATAAAAC+AGG | + | chr2_1:12592819-12592838 | None:intergenic | 35.0% | |
| ACAGCTTGAGTAATACATGT+TGG | + | chr2_1:12592873-12592892 | None:intergenic | 35.0% | |
| TAAGAGCAGAAAATGAGTGT+GGG | + | chr2_1:12592969-12592988 | None:intergenic | 35.0% | |
| TTAAGAGCAGAAAATGAGTG+TGG | + | chr2_1:12592970-12592989 | None:intergenic | 35.0% | |
| ATTGAATGTGTTTGCATCTG+TGG | + | chr2_1:12593139-12593158 | None:intergenic | 35.0% | |
| GCTTAATGAGTTTGTGTTAC+TGG | - | chr2_1:12593167-12593186 | Msa0195710:intron | 35.0% | |
| ! | TTTTCGTATAGAACTGACCA+TGG | + | chr2_1:12593269-12593288 | None:intergenic | 35.0% |
| AAGAGAACAAATTGAGGAGT+CGG | - | chr2_1:12593291-12593310 | Msa0195710:intron | 35.0% | |
| !! | TGCAGCAATTTTTGAAGAGT+CGG | + | chr2_1:12593425-12593444 | None:intergenic | 35.0% |
| AATAACTTCTCTATGAACGG+AGG | - | chr2_1:12593556-12593575 | Msa0195710:intron | 35.0% | |
| !! | GTGTTTTGAATAATGTCCTC+GGG | - | chr2_1:12593797-12593816 | Msa0195710:five_prime_UTR | 35.0% |
| TTGTGCTATGTGTTGAGCTT+GGG | + | chr2_1:12589453-12589472 | None:intergenic | 40.0% | |
| TTTGTGCTATGTGTTGAGCT+TGG | + | chr2_1:12589454-12589473 | None:intergenic | 40.0% | |
| TTCTTCAATTGGGGATCTTC+TGG | - | chr2_1:12589652-12589671 | Msa0195710:CDS | 40.0% | |
| TCTTCAATTGGGGATCTTCT+GGG | - | chr2_1:12589653-12589672 | Msa0195710:CDS | 40.0% | |
| !!! | GTACTTGGTTTTGGAATCAG+TGG | - | chr2_1:12590097-12590116 | Msa0195710:intron | 40.0% |
| GAATGCTTGTGAATTGATGC+TGG | - | chr2_1:12590125-12590144 | Msa0195710:intron | 40.0% | |
| ! | GTCGAAATTACCCCATGTTT+TGG | - | chr2_1:12590772-12590791 | Msa0195710:CDS | 40.0% |
| ACCACTTCTAATTCCTCCTT+AGG | + | chr2_1:12590910-12590929 | None:intergenic | 40.0% | |
| CACTGAAGATGTTGCTACAA+AGG | - | chr2_1:12591047-12591066 | Msa0195710:CDS | 40.0% | |
| ACAAAGGCTATGTTAAGACC+TGG | - | chr2_1:12591063-12591082 | Msa0195710:CDS | 40.0% | |
| TTAAGACCTGGCATCTGTTA+TGG | - | chr2_1:12591075-12591094 | Msa0195710:CDS | 40.0% | |
| CGAGCTTCAGAATTACATCT+TGG | - | chr2_1:12591200-12591219 | Msa0195710:CDS | 40.0% | |
| GAATTACATCTTGGCCGAAT+TGG | - | chr2_1:12591209-12591228 | Msa0195710:CDS | 40.0% | |
| !! | ATTGGTTTGCGTTCTTCAAG+AGG | - | chr2_1:12591227-12591246 | Msa0195710:CDS | 40.0% |
| TTTGCGTTCTTCAAGAGGTT+AGG | - | chr2_1:12591232-12591251 | Msa0195710:CDS | 40.0% | |
| GCATCTCCGAAACTGAAAAA+TGG | + | chr2_1:12591258-12591277 | None:intergenic | 40.0% | |
| ATTTCTCAGATTGAGTGCCT+GGG | + | chr2_1:12591467-12591486 | None:intergenic | 40.0% | |
| TCAATCTGAGAAATCCGTTG+TGG | - | chr2_1:12591473-12591492 | Msa0195710:CDS | 40.0% | |
| GAAAATTCTCAAATTCGCGG+TGG | - | chr2_1:12591498-12591517 | Msa0195710:CDS | 40.0% | |
| GACAAGTCATCTAATGCTTC+CGG | - | chr2_1:12591564-12591583 | Msa0195710:CDS | 40.0% | |
| ACGAAAAATGTACTCCCTCT+TGG | + | chr2_1:12591655-12591674 | None:intergenic | 40.0% | |
| !!! | TCCGATAACTTTTTTCCACG+TGG | + | chr2_1:12591689-12591708 | None:intergenic | 40.0% |
| TGGTTTGAGTGGTTTAATCC+TGG | - | chr2_1:12591749-12591768 | Msa0195710:CDS | 40.0% | |
| AGAATCCAGGCTAAATGTTG+GGG | + | chr2_1:12591913-12591932 | None:intergenic | 40.0% | |
| CTAGAATCCAGGCTAAATGT+TGG | + | chr2_1:12591915-12591934 | None:intergenic | 40.0% | |
| ! | TGTAGCTGATAATGCATCTG+GGG | + | chr2_1:12592012-12592031 | None:intergenic | 40.0% |
| ! | CTGTAGCTGATAATGCATCT+GGG | + | chr2_1:12592013-12592032 | None:intergenic | 40.0% |
| ! | TCTGTAGCTGATAATGCATC+TGG | + | chr2_1:12592014-12592033 | None:intergenic | 40.0% |
| GTCACATAGTAGTAGTTGTG+TGG | - | chr2_1:12592103-12592122 | Msa0195710:CDS | 40.0% | |
| CACATAGTAGTAGTTGTGTG+GGG | - | chr2_1:12592105-12592124 | Msa0195710:CDS | 40.0% | |
| TGTCTCATGGACTTGTCATA+TGG | + | chr2_1:12592134-12592153 | None:intergenic | 40.0% | |
| ATGACAAGTCCATGAGACAA+TGG | - | chr2_1:12592135-12592154 | Msa0195710:CDS | 40.0% | |
| AACTTCAAGAATGGACAGAG+TGG | - | chr2_1:12592225-12592244 | Msa0195710:CDS | 40.0% | |
| ACTTCAAGAATGGACAGAGT+GGG | - | chr2_1:12592226-12592245 | Msa0195710:CDS | 40.0% | |
| !! | TTCTGAGATGGAAAATGCCT+TGG | - | chr2_1:12592388-12592407 | Msa0195710:CDS | 40.0% |
| ! | TCTGAGATGGAAAATGCCTT+GGG | - | chr2_1:12592389-12592408 | Msa0195710:CDS | 40.0% |
| AACGAGCTAATACTGCAGTA+CGG | - | chr2_1:12592432-12592451 | Msa0195710:CDS | 40.0% | |
| CAAATTGGCACAGATATCGA+AGG | - | chr2_1:12592634-12592653 | Msa0195710:CDS | 40.0% | |
| ATTCCAAATGCTTTGCCATG+CGG | - | chr2_1:12592714-12592733 | Msa0195710:exon | 40.0% | |
| AAAATGCATGGCAAAGCAGT+TGG | + | chr2_1:12592830-12592849 | None:intergenic | 40.0% | |
| CCTGGTGAAGAAAAAATGCA+TGG | + | chr2_1:12592842-12592861 | None:intergenic | 40.0% | |
| !!! | CCATGCATTTTTTCTTCACC+AGG | - | chr2_1:12592839-12592858 | Msa0195710:intron | 40.0% |
| ! | CAAGCTGTTGTTTGTTCTCA+CGG | - | chr2_1:12592885-12592904 | Msa0195710:intron | 40.0% |
| ! | AAGCTGTTGTTTGTTCTCAC+GGG | - | chr2_1:12592886-12592905 | Msa0195710:intron | 40.0% |
| TCATTTCCTTGTTGAATGGG+TGG | - | chr2_1:12593066-12593085 | Msa0195710:intron | 40.0% | |
| CATTTCCTTGTTGAATGGGT+GGG | - | chr2_1:12593067-12593086 | Msa0195710:intron | 40.0% | |
| TATTACCCACCCATTCAACA+AGG | + | chr2_1:12593075-12593094 | None:intergenic | 40.0% | |
| TGGGTCTGTTCTCATTGTAA+AGG | - | chr2_1:12593187-12593206 | Msa0195710:intron | 40.0% | |
| AAATATCACAGGCTAAACGG+CGG | - | chr2_1:12593212-12593231 | Msa0195710:intron | 40.0% | |
| AACAGAAGAACTTCTCTCCA+TGG | - | chr2_1:12593249-12593268 | Msa0195710:intron | 40.0% | |
| GCACTAAAAAGAGGAATCGA+TGG | - | chr2_1:12593442-12593461 | Msa0195710:intron | 40.0% | |
| TAGCTTCAAGGACACGAAAA+AGG | - | chr2_1:12593477-12593496 | Msa0195710:intron | 40.0% | |
| AGCTTCAAGGACACGAAAAA+GGG | - | chr2_1:12593478-12593497 | Msa0195710:intron | 40.0% | |
| !! | AACCAGTTCTGAAATAGACG+CGG | + | chr2_1:12593527-12593546 | None:intergenic | 40.0% |
| CAAACAACTTGATGTGCACA+TGG | + | chr2_1:12593646-12593665 | None:intergenic | 40.0% | |
| ATGCATTCAGATCTTGGATC+TGG | - | chr2_1:12593834-12593853 | Msa0195710:five_prime_UTR | 40.0% | |
| TGTGCTATGTGTTGAGCTTG+GGG | + | chr2_1:12589452-12589471 | None:intergenic | 45.0% | |
| ATTTACTAGTGCGTATGCCG+TGG | - | chr2_1:12590196-12590215 | Msa0195710:intron | 45.0% | |
| TTTACTAGTGCGTATGCCGT+GGG | - | chr2_1:12590197-12590216 | Msa0195710:intron | 45.0% | |
| TAATTGATCCGTGCATCCCA+CGG | + | chr2_1:12590216-12590235 | None:intergenic | 45.0% | |
| TTGCAGCTAAATGGCATCAC+TGG | - | chr2_1:12590588-12590607 | Msa0195710:intron | 45.0% | |
| TTACTTGACTCCCCTAAAGG+TGG | + | chr2_1:12590697-12590716 | None:intergenic | 45.0% | |
| CTCTTACTTGACTCCCCTAA+AGG | + | chr2_1:12590700-12590719 | None:intergenic | 45.0% | |
| ! | TGTGACTTGCCCAAAACATG+GGG | + | chr2_1:12590785-12590804 | None:intergenic | 45.0% |
| ! | CTGTGACTTGCCCAAAACAT+GGG | + | chr2_1:12590786-12590805 | None:intergenic | 45.0% |
| TGACCTCAGATGAAACTGCA+GGG | + | chr2_1:12590876-12590895 | None:intergenic | 45.0% | |
| CTTCTAATTCCTCCTTAGGC+TGG | + | chr2_1:12590906-12590925 | None:intergenic | 45.0% | |
| GCCTAAGGAGGAATTAGAAG+TGG | - | chr2_1:12590906-12590925 | Msa0195710:CDS | 45.0% | |
| TTAGAAGTGGTTGAGTCCCA+TGG | - | chr2_1:12590919-12590938 | Msa0195710:CDS | 45.0% | |
| TTGCATCCATAACAGATGCC+AGG | + | chr2_1:12591084-12591103 | None:intergenic | 45.0% | |
| TCAGTTTCGGAGATGCAATG+TGG | - | chr2_1:12591262-12591281 | Msa0195710:CDS | 45.0% | |
| TCACATGCTTGTGCAATGGA+TGG | - | chr2_1:12591312-12591331 | Msa0195710:CDS | 45.0% | |
| AGTTTATGCAGCGATGGCAT+TGG | - | chr2_1:12591348-12591367 | Msa0195710:CDS | 45.0% | |
| CCTGGGGGAATTGAATTACA+AGG | + | chr2_1:12591450-12591469 | None:intergenic | 45.0% | |
| CCTTGTAATTCAATTCCCCC+AGG | - | chr2_1:12591447-12591466 | Msa0195710:CDS | 45.0% | |
| TTTCTCAGATTGAGTGCCTG+GGG | + | chr2_1:12591466-12591485 | None:intergenic | 45.0% | |
| GATTTCTCAGATTGAGTGCC+TGG | + | chr2_1:12591468-12591487 | None:intergenic | 45.0% | |
| ! | CCGCATTTTTCTTGAAGCAG+GGG | + | chr2_1:12591603-12591622 | None:intergenic | 45.0% |
| CCCCTGCTTCAAGAAAAATG+CGG | - | chr2_1:12591600-12591619 | Msa0195710:CDS | 45.0% | |
| ! | CCCGCATTTTTCTTGAAGCA+GGG | + | chr2_1:12591604-12591623 | None:intergenic | 45.0% |
| CCCTGCTTCAAGAAAAATGC+GGG | - | chr2_1:12591601-12591620 | Msa0195710:CDS | 45.0% | |
| ! | TCCCGCATTTTTCTTGAAGC+AGG | + | chr2_1:12591605-12591624 | None:intergenic | 45.0% |
| TATCGGACATACGGGTCTAA+AGG | - | chr2_1:12591702-12591721 | Msa0195710:CDS | 45.0% | |
| ATCGGACATACGGGTCTAAA+GGG | - | chr2_1:12591703-12591722 | Msa0195710:CDS | 45.0% | |
| TCTAAAGGGTCTTCAAGAGG+AGG | - | chr2_1:12591717-12591736 | Msa0195710:CDS | 45.0% | |
| AGGCTAAATGTTGGGGTAGA+TGG | + | chr2_1:12591906-12591925 | None:intergenic | 45.0% | |
| ATCTACCCCAACATTTAGCC+TGG | - | chr2_1:12591905-12591924 | Msa0195710:CDS | 45.0% | |
| ! | GTAGCTGATAATGCATCTGG+GGG | + | chr2_1:12592011-12592030 | None:intergenic | 45.0% |
| ! | TGATTCTGAAGATGGTTCCG+AGG | - | chr2_1:12592183-12592202 | Msa0195710:CDS | 45.0% |
| ! | GATTCTGAAGATGGTTCCGA+GGG | - | chr2_1:12592184-12592203 | Msa0195710:CDS | 45.0% |
| GACAGAGTGGGCAAATCAAA+AGG | - | chr2_1:12592238-12592257 | Msa0195710:CDS | 45.0% | |
| GGCAAATCAAAAGGTGATGC+AGG | - | chr2_1:12592247-12592266 | Msa0195710:CDS | 45.0% | |
| AGGCTGAGCTTAAGACACTA+AGG | - | chr2_1:12592294-12592313 | Msa0195710:CDS | 45.0% | |
| GAAAATGCCTTGGGTAAAGC+AGG | - | chr2_1:12592398-12592417 | Msa0195710:CDS | 45.0% | |
| AGATGGAGAATGCTGCATTG+AGG | - | chr2_1:12592462-12592481 | Msa0195710:CDS | 45.0% | |
| TGCTGCATTGAGGAAAGAGA+TGG | - | chr2_1:12592472-12592491 | Msa0195710:CDS | 45.0% | |
| TGCATTGAGGAAAGAGATGG+AGG | - | chr2_1:12592475-12592494 | Msa0195710:CDS | 45.0% | |
| ! | AGCTGTTGTTTGTTCTCACG+GGG | - | chr2_1:12592887-12592906 | Msa0195710:intron | 45.0% |
| CAATTTGATCCTCTCCTCCT+TGG | + | chr2_1:12593323-12593342 | None:intergenic | 45.0% | |
| CAAGGAGGAGAGGATCAAAT+TGG | - | chr2_1:12593321-12593340 | Msa0195710:intron | 45.0% | |
| GGAGAGGATCAAATTGGAAG+CGG | - | chr2_1:12593327-12593346 | Msa0195710:intron | 45.0% | |
| GATCAAATTGGAAGCGGAGA+AGG | - | chr2_1:12593333-12593352 | Msa0195710:intron | 45.0% | |
| TTTCGTGTCCTTGAAGCTAC+CGG | + | chr2_1:12593476-12593495 | None:intergenic | 45.0% | |
| AAGGACACGAAAAAGGGTTC+TGG | - | chr2_1:12593484-12593503 | Msa0195710:intron | 45.0% | |
| !! | TTCTGAAATAGACGCGGTGT+GGG | + | chr2_1:12593521-12593540 | None:intergenic | 45.0% |
| AACTTCTCTATGAACGGAGG+AGG | - | chr2_1:12593559-12593578 | Msa0195710:intron | 45.0% | |
| CAACAGACATCTCTTCCGAA+AGG | + | chr2_1:12593615-12593634 | None:intergenic | 45.0% | |
| AATGAGCTCCATGAGAAGCA+GGG | - | chr2_1:12593676-12593695 | Msa0195710:intron | 45.0% | |
| TGCAAGATTGTCCTTCTTGC+AGG | - | chr2_1:12593701-12593720 | Msa0195710:intron | 45.0% | |
| ACAGAAATTCGCTCCTGGAT+GGG | + | chr2_1:12593730-12593749 | None:intergenic | 45.0% | |
| ATTATTCTATGGGAGTCCCG+AGG | + | chr2_1:12593816-12593835 | None:intergenic | 45.0% | |
| ! | ATGGCATCACTGGTTGTCAG+TGG | - | chr2_1:12590598-12590617 | Msa0195710:intron | 50.0% |
| TTCAGGGCTGATCCACCTTT+AGG | - | chr2_1:12590682-12590701 | Msa0195710:CDS | 50.0% | |
| TCAGGGCTGATCCACCTTTA+GGG | - | chr2_1:12590683-12590702 | Msa0195710:CDS | 50.0% | |
| ! | GCTGTGACTTGCCCAAAACA+TGG | + | chr2_1:12590787-12590806 | None:intergenic | 50.0% |
| GACTTGTGCACTGTTAGCCA+CGG | - | chr2_1:12590811-12590830 | Msa0195710:CDS | 50.0% | |
| GTTAGCCACGGTTGTTCTGA+TGG | - | chr2_1:12590823-12590842 | Msa0195710:CDS | 50.0% | |
| TCAAGCCATCAGAACAACCG+TGG | + | chr2_1:12590831-12590850 | None:intergenic | 50.0% | |
| CTGCAGGGCTAGATAATCCA+AGG | + | chr2_1:12590861-12590880 | None:intergenic | 50.0% | |
| TAGCCCTGCAGTTTCATCTG+AGG | - | chr2_1:12590870-12590889 | Msa0195710:CDS | 50.0% | |
| CTGACCTCAGATGAAACTGC+AGG | + | chr2_1:12590877-12590896 | None:intergenic | 50.0% | |
| ! | CTGCAGTTTCATCTGAGGTC+AGG | - | chr2_1:12590875-12590894 | Msa0195710:CDS | 50.0% |
| ATCACTCCAATCAGCGCCAT+GGG | + | chr2_1:12590938-12590957 | None:intergenic | 50.0% | |
| CGTGTCACATGCTTGTGCAA+TGG | - | chr2_1:12591308-12591327 | Msa0195710:CDS | 50.0% | |
| TTCTCAGATTGAGTGCCTGG+GGG | + | chr2_1:12591465-12591484 | None:intergenic | 50.0% | |
| ! | TCAAATTCGCGGTGGACTCT+TGG | - | chr2_1:12591506-12591525 | Msa0195710:CDS | 50.0% |
| TTGAAGCAGGGGAGATTGAG+AGG | + | chr2_1:12591592-12591611 | None:intergenic | 50.0% | |
| TCCATTCGAGTAGCACCAAG+AGG | - | chr2_1:12591637-12591656 | Msa0195710:CDS | 50.0% | |
| CCATTCGAGTAGCACCAAGA+GGG | - | chr2_1:12591638-12591657 | Msa0195710:CDS | 50.0% | |
| TCGTCAGAAGTCAATCCACG+TGG | - | chr2_1:12591671-12591690 | Msa0195710:CDS | 50.0% | |
| GGGTCTAAAGGGTCTTCAAG+AGG | - | chr2_1:12591714-12591733 | Msa0195710:CDS | 50.0% | |
| TCAAGAGGAGGAAAGCTGAG+TGG | - | chr2_1:12591729-12591748 | Msa0195710:CDS | 50.0% | |
| GGAAAGCTGAGTGGTTTGAG+TGG | - | chr2_1:12591738-12591757 | Msa0195710:CDS | 50.0% | |
| ! | GGACTACTGACTGCTGGTAT+AGG | + | chr2_1:12591990-12592009 | None:intergenic | 50.0% |
| TTGGGGCAACCATTGTCTCA+TGG | + | chr2_1:12592147-12592166 | None:intergenic | 50.0% | |
| TGAAGATGGTTCCGAGGGTT+CGG | - | chr2_1:12592189-12592208 | Msa0195710:CDS | 50.0% | |
| ! | TCGTCGACTGAGTAAGGACA+AGG | - | chr2_1:12592274-12592293 | Msa0195710:CDS | 50.0% |
| AATGCCTTGGGTAAAGCAGG+TGG | - | chr2_1:12592401-12592420 | Msa0195710:CDS | 50.0% | |
| TTGTCCACCTGCTTTACCCA+AGG | + | chr2_1:12592408-12592427 | None:intergenic | 50.0% | |
| AAAGCAAGCCGAAGTGCAAG+CGG | - | chr2_1:12592661-12592680 | Msa0195710:CDS | 50.0% | |
| GAATTGCTCCGCTTGCACTT+CGG | + | chr2_1:12592672-12592691 | None:intergenic | 50.0% | |
| ! | GAACCGCATGGCAAAGCATT+TGG | + | chr2_1:12592720-12592739 | None:intergenic | 50.0% |
| TCTGGTGAAGATGAACCGCA+TGG | + | chr2_1:12592732-12592751 | None:intergenic | 50.0% | |
| ! | GCTGTTGTTTGTTCTCACGG+GGG | - | chr2_1:12592888-12592907 | Msa0195710:intron | 50.0% |
| ! | CTGTTGTTTGTTCTCACGGG+GGG | - | chr2_1:12592889-12592908 | Msa0195710:intron | 50.0% |
| ! | ATACGTGTCACTGCGTGTGT+CGG | + | chr2_1:12593013-12593032 | None:intergenic | 50.0% |
| GGAATCGATGGAAGCTATGC+CGG | - | chr2_1:12593454-12593473 | Msa0195710:intron | 50.0% | |
| AAGCTATGCCGGTAGCTTCA+AGG | - | chr2_1:12593465-12593484 | Msa0195710:intron | 50.0% | |
| ! | TCTGAAATAGACGCGGTGTG+GGG | + | chr2_1:12593520-12593539 | None:intergenic | 50.0% |
| !! | GTTCTGAAATAGACGCGGTG+TGG | + | chr2_1:12593522-12593541 | None:intergenic | 50.0% |
| CACCGCGTCTATTTCAGAAC+TGG | - | chr2_1:12593522-12593541 | Msa0195710:intron | 50.0% | |
| ! | TGAACGGAGGAGGTGTGAAA+CGG | - | chr2_1:12593569-12593588 | Msa0195710:intron | 50.0% |
| ! | AGGAGGTGTGAAACGGGAAA+GGG | - | chr2_1:12593576-12593595 | Msa0195710:intron | 50.0% |
| GGAGTGTGTGATGTGCCTTT+CGG | - | chr2_1:12593597-12593616 | Msa0195710:intron | 50.0% | |
| CAATGAGCTCCATGAGAAGC+AGG | - | chr2_1:12593675-12593694 | Msa0195710:intron | 50.0% | |
| CTTGCATTCCCTGCTTCTCA+TGG | + | chr2_1:12593687-12593706 | None:intergenic | 50.0% | |
| CAGAAATTCGCTCCTGGATG+GGG | + | chr2_1:12593729-12593748 | None:intergenic | 50.0% | |
| CACAGAAATTCGCTCCTGGA+TGG | + | chr2_1:12593731-12593750 | None:intergenic | 50.0% | |
| AACGCACAGAAATTCGCTCC+TGG | + | chr2_1:12593735-12593754 | None:intergenic | 50.0% | |
| GCTATGTGTTGAGCTTGGGG+AGG | + | chr2_1:12589449-12589468 | None:intergenic | 55.0% | |
| CAGGGCTGATCCACCTTTAG+GGG | - | chr2_1:12590684-12590703 | Msa0195710:CDS | 55.0% | |
| GATGGCTTGAAGCTCGACCT+TGG | - | chr2_1:12590841-12590860 | Msa0195710:CDS | 55.0% | |
| !! | TTGAGTCCCATGGCGCTGAT+TGG | - | chr2_1:12590929-12590948 | Msa0195710:CDS | 55.0% |
| GATCACTCCAATCAGCGCCA+TGG | + | chr2_1:12590939-12590958 | None:intergenic | 55.0% | |
| !! | TGCAGCGATGGCATTGGTGA+TGG | - | chr2_1:12591354-12591373 | Msa0195710:CDS | 55.0% |
| CAGGGGAGATTGAGAGGTTC+CGG | + | chr2_1:12591586-12591605 | None:intergenic | 55.0% | |
| !! | CCCTCTTGGTGCTACTCGAA+TGG | + | chr2_1:12591641-12591660 | None:intergenic | 55.0% |
| GAAGATGGTTCCGAGGGTTC+GGG | - | chr2_1:12592190-12592209 | Msa0195710:CDS | 55.0% | |
| ! | TTTTGCAGCTCCCGAACCCT+CGG | + | chr2_1:12592203-12592222 | None:intergenic | 55.0% |
| GGGTAAAGCAGGTGGACAAG+TGG | - | chr2_1:12592409-12592428 | Msa0195710:CDS | 55.0% | |
| TGCAGTACGGAAGCTCGAGA+TGG | - | chr2_1:12592445-12592464 | Msa0195710:CDS | 55.0% | |
| GGAGGCTGCTAAGTTACGTG+CGG | - | chr2_1:12592493-12592512 | Msa0195710:CDS | 55.0% | |
| AGTGCAAGCGGAGCAATTCG+AGG | - | chr2_1:12592673-12592692 | Msa0195710:CDS | 55.0% | |
| TTTGTTCTCACGGGGGGCTT+CGG | - | chr2_1:12592895-12592914 | Msa0195710:intron | 55.0% | |
| TGAGGAGTCGGCTAGAACCA+AGG | - | chr2_1:12593303-12593322 | Msa0195710:intron | 55.0% | |
| ! | GAACGGAGGAGGTGTGAAAC+GGG | - | chr2_1:12593570-12593589 | Msa0195710:intron | 55.0% |
| ! | GAGGAGGTGTGAAACGGGAA+AGG | - | chr2_1:12593575-12593594 | Msa0195710:intron | 55.0% |
| TGCGTATGCCGTGGGATGCA+CGG | - | chr2_1:12590205-12590224 | Msa0195710:intron | 60.0% | |
| GGTCAGGCTTAGCCAGCCTA+AGG | - | chr2_1:12590891-12590910 | Msa0195710:CDS | 60.0% | |
| CAGGCTTAGCCAGCCTAAGG+AGG | - | chr2_1:12590894-12590913 | Msa0195710:CDS | 60.0% | |
| ! | TCTGGGGGACTACTGACTGC+TGG | + | chr2_1:12591996-12592015 | None:intergenic | 60.0% |
| ! | GGCTGCTCGTCGACTGAGTA+AGG | - | chr2_1:12592268-12592287 | Msa0195710:CDS | 60.0% |
| ATCACAGGCTAAACGGCGGC+AGG | - | chr2_1:12593216-12593235 | Msa0195710:intron | 60.0% | |
| GGAGTCGGCTAGAACCAAGG+AGG | - | chr2_1:12593306-12593325 | Msa0195710:intron | 60.0% | |
| CGGCTAGAACCAAGGAGGAG+AGG | - | chr2_1:12593311-12593330 | Msa0195710:intron | 60.0% | |
| TGGATGGGGCTCCTGCAAGA+AGG | + | chr2_1:12593715-12593734 | None:intergenic | 60.0% | |
| TTCTTGCAGGAGCCCCATCC+AGG | - | chr2_1:12593714-12593733 | Msa0195710:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 12589420 | 12593910 | 12589420 | ID=Msa0195710;Name=Msa0195710 |
| chr2_1 | mRNA | 12589420 | 12593910 | 12589420 | ID=Msa0195710-mRNA-1;Parent=Msa0195710;Name=Msa0195710-mRNA-1;_AED=0.07;_eAED=0.07;_QI=230|1|1|1|0.33|0.25|4|142|880 |
| chr2_1 | exon | 12589420 | 12590107 | 12589420 | ID=Msa0195710-mRNA-1:exon:5519;Parent=Msa0195710-mRNA-1 |
| chr2_1 | exon | 12590636 | 12592736 | 12590636 | ID=Msa0195710-mRNA-1:exon:5518;Parent=Msa0195710-mRNA-1 |
| chr2_1 | exon | 12593407 | 12593445 | 12593407 | ID=Msa0195710-mRNA-1:exon:5517;Parent=Msa0195710-mRNA-1 |
| chr2_1 | exon | 12593724 | 12593910 | 12593724 | ID=Msa0195710-mRNA-1:exon:5516;Parent=Msa0195710-mRNA-1 |
| chr2_1 | five_prime_UTR | 12593724 | 12593910 | 12593724 | ID=Msa0195710-mRNA-1:five_prime_utr;Parent=Msa0195710-mRNA-1 |
| chr2_1 | five_prime_UTR | 12593407 | 12593445 | 12593407 | ID=Msa0195710-mRNA-1:five_prime_utr;Parent=Msa0195710-mRNA-1 |
| chr2_1 | five_prime_UTR | 12592733 | 12592736 | 12592733 | ID=Msa0195710-mRNA-1:five_prime_utr;Parent=Msa0195710-mRNA-1 |
| chr2_1 | CDS | 12590636 | 12592732 | 12590636 | ID=Msa0195710-mRNA-1:cds;Parent=Msa0195710-mRNA-1 |
| chr2_1 | CDS | 12589562 | 12590107 | 12589562 | ID=Msa0195710-mRNA-1:cds;Parent=Msa0195710-mRNA-1 |
| chr2_1 | three_prime_UTR | 12589420 | 12589561 | 12589420 | ID=Msa0195710-mRNA-1:three_prime_utr;Parent=Msa0195710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
