Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0189110 | XP_003592995.2 | 95.431 | 1182 | 19 | 4 | 1 | 1150 | 1 | 1179 | 0.0 | 2281 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0189110 | G7INR8 | 95.431 | 1182 | 19 | 4 | 1 | 1150 | 1 | 1179 | 0.0 | 2281 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0023330 | Msa0189110 | 0.805973 | 1.030583e-49 | -8.615850e-47 |
Msa0026430 | Msa0189110 | 0.804815 | 1.802039e-49 | -8.615850e-47 |
Msa0031180 | Msa0189110 | 0.825768 | 3.914958e-54 | -8.615850e-47 |
Msa0034180 | Msa0189110 | 0.812836 | 3.469591e-51 | -8.615850e-47 |
Msa0035150 | Msa0189110 | 0.810292 | 1.239364e-50 | -8.615850e-47 |
Msa0037120 | Msa0189110 | 0.805206 | 1.492895e-49 | -8.615850e-47 |
Msa0045910 | Msa0189110 | 0.804008 | 2.654188e-49 | -8.615850e-47 |
Msa0051210 | Msa0189110 | 0.818287 | 2.120952e-52 | -8.615850e-47 |
Msa0051450 | Msa0189110 | 0.815279 | 1.002618e-51 | -8.615850e-47 |
Msa0064110 | Msa0189110 | 0.817836 | 2.682052e-52 | -8.615850e-47 |
Msa0064920 | Msa0189110 | 0.837069 | 6.459856e-57 | -8.615850e-47 |
Msa0078060 | Msa0189110 | 0.800707 | 1.270054e-48 | -8.615850e-47 |
Msa0078480 | Msa0189110 | 0.806144 | 9.485115e-50 | -8.615850e-47 |
Msa0079130 | Msa0189110 | 0.801969 | 7.005185e-49 | -8.615850e-47 |
Msa0079370 | Msa0189110 | 0.831475 | 1.634994e-55 | -8.615850e-47 |
Msa0079390 | Msa0189110 | 0.846460 | 2.142691e-59 | -8.615850e-47 |
Msa0081900 | Msa0189110 | 0.820176 | 7.876348e-53 | -8.615850e-47 |
Msa0083090 | Msa0189110 | 0.802075 | 6.663038e-49 | -8.615850e-47 |
Msa0084340 | Msa0189110 | 0.804317 | 2.289373e-49 | -8.615850e-47 |
Msa0084720 | Msa0189110 | 0.803484 | 3.409612e-49 | -8.615850e-47 |
Msa0102140 | Msa0189110 | 0.834043 | 3.765852e-56 | -8.615850e-47 |
Msa0104800 | Msa0189110 | 0.807596 | 4.679630e-50 | -8.615850e-47 |
Msa0122580 | Msa0189110 | 0.818646 | 1.758877e-52 | -8.615850e-47 |
Msa0122590 | Msa0189110 | 0.810338 | 1.211416e-50 | -8.615850e-47 |
Msa0123300 | Msa0189110 | 0.810913 | 9.100554e-51 | -8.615850e-47 |
Msa0124320 | Msa0189110 | 0.827641 | 1.398598e-54 | -8.615850e-47 |
Msa0128180 | Msa0189110 | 0.824302 | 8.688488e-54 | -8.615850e-47 |
Msa0138210 | Msa0189110 | 0.821119 | 4.782045e-53 | -8.615850e-47 |
Msa0143850 | Msa0189110 | 0.802279 | 6.049144e-49 | -8.615850e-47 |
Msa0151180 | Msa0189110 | 0.807351 | 5.274837e-50 | -8.615850e-47 |
Msa0166870 | Msa0189110 | 0.803044 | 4.206945e-49 | -8.615850e-47 |
Msa0167850 | Msa0189110 | 0.801599 | 8.345099e-49 | -8.615850e-47 |
Msa0172080 | Msa0189110 | 0.841723 | 3.997464e-58 | -8.615850e-47 |
Msa0178570 | Msa0189110 | 0.813936 | 1.988283e-51 | -8.615850e-47 |
Msa0183420 | Msa0189110 | 0.811496 | 6.801349e-51 | -8.615850e-47 |
Msa0186950 | Msa0189110 | 0.802046 | 6.755045e-49 | -8.615850e-47 |
Msa0189110 | Msa0195710 | 0.804586 | 2.011558e-49 | -8.615850e-47 |
Msa0189110 | Msa0200560 | 0.820998 | 5.098718e-53 | -8.615850e-47 |
Msa0189110 | Msa0202730 | 0.800462 | 1.425093e-48 | -8.615850e-47 |
Msa0189110 | Msa0206010 | 0.835245 | 1.876912e-56 | -8.615850e-47 |
Msa0189110 | Msa0207030 | 0.804235 | 2.381027e-49 | -8.615850e-47 |
Msa0189110 | Msa0218370 | 0.832573 | 8.752712e-56 | -8.615850e-47 |
Msa0189110 | Msa0218460 | 0.812229 | 4.709580e-51 | -8.615850e-47 |
Msa0189110 | Msa0231240 | 0.988283 | 2.042992e-173 | -8.615850e-47 |
Msa0189110 | Msa0232340 | 0.833792 | 4.350863e-56 | -8.615850e-47 |
Msa0189110 | Msa0234440 | 0.804735 | 1.872903e-49 | -8.615850e-47 |
Msa0189110 | Msa0236420 | 0.810757 | 9.837055e-51 | -8.615850e-47 |
Msa0189110 | Msa0237310 | 0.833137 | 6.338023e-56 | -8.615850e-47 |
Msa0189110 | Msa0237470 | 0.816796 | 4.598196e-52 | -8.615850e-47 |
Msa0189110 | Msa0243250 | 0.814170 | 1.765999e-51 | -8.615850e-47 |
Msa0189110 | Msa0245860 | 0.812395 | 4.332057e-51 | -8.615850e-47 |
Msa0189110 | Msa0249100 | 0.847863 | 8.836663e-60 | -8.615850e-47 |
Msa0189110 | Msa0251270 | 0.805157 | 1.528663e-49 | -8.615850e-47 |
Msa0189110 | Msa0265150 | 0.813817 | 2.112347e-51 | -8.615850e-47 |
Msa0189110 | Msa0270960 | 0.815707 | 8.051744e-52 | -8.615850e-47 |
Msa0189110 | Msa0271790 | 0.842070 | 3.235596e-58 | -8.615850e-47 |
Msa0189110 | Msa0274730 | 0.833262 | 5.900704e-56 | -8.615850e-47 |
Msa0189110 | Msa0280150 | 0.833020 | 6.777954e-56 | -8.615850e-47 |
Msa0189110 | Msa0281640 | 0.824293 | 8.730046e-54 | -8.615850e-47 |
Msa0189110 | Msa0281930 | 0.810057 | 1.392524e-50 | -8.615850e-47 |
Msa0189110 | Msa0284520 | 0.802491 | 5.471531e-49 | -8.615850e-47 |
Msa0189110 | Msa0286670 | 0.807308 | 5.385482e-50 | -8.615850e-47 |
Msa0189110 | Msa0287410 | 0.813056 | 3.104965e-51 | -8.615850e-47 |
Msa0189110 | Msa0303150 | 0.802174 | 6.357481e-49 | -8.615850e-47 |
Msa0189110 | Msa0308440 | 0.802707 | 4.936637e-49 | -8.615850e-47 |
Msa0189110 | Msa0308560 | 0.808830 | 2.554542e-50 | -8.615850e-47 |
Msa0189110 | Msa0310430 | 0.819063 | 1.414059e-52 | -8.615850e-47 |
Msa0189110 | Msa0315290 | 0.825250 | 5.192100e-54 | -8.615850e-47 |
Msa0189110 | Msa0315530 | 0.822597 | 2.175946e-53 | -8.615850e-47 |
Msa0189110 | Msa0320800 | 0.832719 | 8.051818e-56 | -8.615850e-47 |
Msa0189110 | Msa0321080 | 0.816185 | 6.300316e-52 | -8.615850e-47 |
Msa0189110 | Msa0323370 | 0.986693 | 1.201321e-167 | -8.615850e-47 |
Msa0189110 | Msa0326110 | 0.832894 | 7.284704e-56 | -8.615850e-47 |
Msa0189110 | Msa0347950 | 0.801102 | 1.055124e-48 | -8.615850e-47 |
Msa0189110 | Msa0363790 | 0.820943 | 5.250701e-53 | -8.615850e-47 |
Msa0189110 | Msa0373450 | 0.825233 | 5.242188e-54 | -8.615850e-47 |
Msa0189110 | Msa0377440 | 0.811229 | 7.772477e-51 | -8.615850e-47 |
Msa0189110 | Msa0389910 | 0.817452 | 3.274085e-52 | -8.615850e-47 |
Msa0189110 | Msa0390960 | 0.817165 | 3.799363e-52 | -8.615850e-47 |
Msa0189110 | Msa0403490 | 0.802068 | 6.686920e-49 | -8.615850e-47 |
Msa0189110 | Msa0423840 | 0.832318 | 1.012003e-55 | -8.615850e-47 |
Msa0189110 | Msa0438040 | 0.816132 | 6.474150e-52 | -8.615850e-47 |
Msa0189110 | Msa0439970 | 0.830137 | 3.478446e-55 | -8.615850e-47 |
Msa0189110 | Msa0455760 | 0.831760 | 1.390148e-55 | -8.615850e-47 |
Msa0189110 | Msa0484780 | 0.801297 | 9.625057e-49 | -8.615850e-47 |
Msa0189110 | Msa0486690 | 0.821570 | 3.763404e-53 | -8.615850e-47 |
Msa0189110 | Msa0517650 | 0.817559 | 3.097203e-52 | -8.615850e-47 |
Msa0189110 | Msa0530650 | 0.810459 | 1.140825e-50 | -8.615850e-47 |
Msa0189110 | Msa0566350 | 0.825980 | 3.487306e-54 | -8.615850e-47 |
Msa0189110 | Msa0566750 | 0.822359 | 2.471506e-53 | -8.615850e-47 |
Msa0189110 | Msa0574850 | 0.827376 | 1.618644e-54 | -8.615850e-47 |
Msa0189110 | Msa0587190 | 0.806348 | 8.594918e-50 | -8.615850e-47 |
Msa0189110 | Msa0605190 | 0.804440 | 2.157736e-49 | -8.615850e-47 |
Msa0189110 | Msa0621600 | 0.816212 | 6.211109e-52 | -8.615850e-47 |
Msa0189110 | Msa0626990 | 0.808937 | 2.423356e-50 | -8.615850e-47 |
Msa0189110 | Msa0627350 | 0.814489 | 1.500793e-51 | -8.615850e-47 |
Msa0189110 | Msa0641730 | 0.802180 | 6.341081e-49 | -8.615850e-47 |
Msa0189110 | Msa0645530 | 0.810257 | 1.261421e-50 | -8.615850e-47 |
Msa0189110 | Msa0672760 | 0.800246 | 1.576690e-48 | -8.615850e-47 |
Msa0189110 | Msa0685090 | 0.820893 | 5.392748e-53 | -8.615850e-47 |
Msa0189110 | Msa0685750 | 0.821713 | 3.487203e-53 | -8.615850e-47 |
Msa0189110 | Msa0688070 | 0.836972 | 6.839104e-57 | -8.615850e-47 |
Msa0189110 | Msa0711130 | 0.812515 | 4.078959e-51 | -8.615850e-47 |
Msa0189110 | Msa0722070 | 0.822509 | 2.281099e-53 | -8.615850e-47 |
Msa0189110 | Msa0756380 | 0.806361 | 8.539073e-50 | -8.615850e-47 |
Msa0189110 | Msa0763400 | 0.831903 | 1.282151e-55 | -8.615850e-47 |
Msa0189110 | Msa0763890 | 0.824700 | 7.002820e-54 | -8.615850e-47 |
Msa0189110 | Msa0763920 | 0.824413 | 8.182430e-54 | -8.615850e-47 |
Msa0189110 | Msa0773590 | 0.818548 | 1.850804e-52 | -8.615850e-47 |
Msa0189110 | Msa0780280 | 0.807347 | 5.283825e-50 | -8.615850e-47 |
Msa0189110 | Msa0789560 | 0.805085 | 1.582905e-49 | -8.615850e-47 |
Msa0189110 | Msa0805420 | 0.816719 | 4.784582e-52 | -8.615850e-47 |
Msa0189110 | Msa0808100 | 0.840311 | 9.386320e-58 | -8.615850e-47 |
Msa0189110 | Msa0811040 | 0.816710 | 4.807162e-52 | -8.615850e-47 |
Msa0189110 | Msa0832090 | 0.807861 | 4.110283e-50 | -8.615850e-47 |
Msa0189110 | Msa0834750 | 0.825626 | 4.231355e-54 | -8.615850e-47 |
Msa0189110 | Msa0842770 | 0.810340 | 1.210399e-50 | -8.615850e-47 |
Msa0189110 | Msa0866410 | 0.821516 | 3.873222e-53 | -8.615850e-47 |
Msa0189110 | Msa0969520 | 0.809512 | 1.824168e-50 | -8.615850e-47 |
Msa0189110 | Msa0981310 | 0.818456 | 1.942240e-52 | -8.615850e-47 |
Msa0189110 | Msa1000880 | 0.801191 | 1.011730e-48 | -8.615850e-47 |
Msa0189110 | Msa1026640 | 0.803278 | 3.762673e-49 | -8.615850e-47 |
Msa0189110 | Msa1032440 | 0.806740 | 7.102578e-50 | -8.615850e-47 |
Msa0189110 | Msa1038640 | 0.804165 | 2.462891e-49 | -8.615850e-47 |
Msa0189110 | Msa1065610 | 0.810595 | 1.065908e-50 | -8.615850e-47 |
Msa0189110 | Msa1077070 | 0.840180 | 1.015558e-57 | -8.615850e-47 |
Msa0189110 | Msa1081330 | 0.846038 | 2.791826e-59 | -8.615850e-47 |
Msa0189110 | Msa1109820 | 0.840262 | 9.667797e-58 | -8.615850e-47 |
Msa0189110 | Msa1118110 | 0.827065 | 1.921554e-54 | -8.615850e-47 |
Msa0189110 | Msa1122780 | 0.816342 | 5.809782e-52 | -8.615850e-47 |
Msa0189110 | Msa1149710 | 0.804568 | 2.029049e-49 | -8.615850e-47 |
Msa0189110 | Msa1206100 | 0.821503 | 3.899428e-53 | -8.615850e-47 |
Msa0189110 | Msa1223870 | 0.833947 | 3.979477e-56 | -8.615850e-47 |
Msa0189110 | Msa1224480 | 0.838526 | 2.728743e-57 | -8.615850e-47 |
Msa0189110 | Msa1225200 | 0.800812 | 1.209172e-48 | -8.615850e-47 |
Msa0189110 | Msa1225800 | 0.802432 | 5.627398e-49 | -8.615850e-47 |
Msa0189110 | Msa1241570 | 0.821456 | 3.999933e-53 | -8.615850e-47 |
Msa0189110 | Msa1263060 | 0.834497 | 2.896218e-56 | -8.615850e-47 |
Msa0189110 | Msa1265720 | 0.814377 | 1.588844e-51 | -8.615850e-47 |
Msa0189110 | Msa1270730 | 0.806331 | 8.666080e-50 | -8.615850e-47 |
Msa0189110 | Msa1302550 | 0.834515 | 2.866831e-56 | -8.615850e-47 |
Msa0189110 | Msa1305350 | 0.804408 | 2.191913e-49 | -8.615850e-47 |
Msa0189110 | Msa1306750 | 0.801136 | 1.038363e-48 | -8.615850e-47 |
Msa0189110 | Msa1329550 | 0.819171 | 1.336042e-52 | -8.615850e-47 |
Msa0189110 | Msa1333680 | 0.821437 | 4.040308e-53 | -8.615850e-47 |
Msa0189110 | Msa1333730 | 0.878916 | 1.906405e-69 | -8.615850e-47 |
Msa0189110 | Msa1346080 | 0.830311 | 3.154590e-55 | -8.615850e-47 |
Msa0189110 | Msa1349450 | 0.810481 | 1.128363e-50 | -8.615850e-47 |
Msa0189110 | Msa1360060 | 0.805905 | 1.065082e-49 | -8.615850e-47 |
Msa0189110 | Msa1360200 | 0.803028 | 4.237324e-49 | -8.615850e-47 |
Msa0189110 | Msa1365350 | 0.807138 | 5.851187e-50 | -8.615850e-47 |
Msa0189110 | Msa1372240 | 0.808914 | 2.450546e-50 | -8.615850e-47 |
Msa0189110 | Msa1372290 | 0.826662 | 2.398563e-54 | -8.615850e-47 |
Msa0189110 | Msa1372760 | 0.810838 | 9.443929e-51 | -8.615850e-47 |
Msa0189110 | Msa1377080 | 0.818118 | 2.315895e-52 | -8.615850e-47 |
Msa0189110 | Msa1390350 | 0.988540 | 2.018203e-174 | -8.615850e-47 |
Msa0189110 | Msa1391720 | 0.800162 | 1.640263e-48 | -8.615850e-47 |
Msa0189110 | Msa1393040 | 0.814793 | 1.285552e-51 | -8.615850e-47 |
Msa0189110 | Msa1401460 | 0.834924 | 2.261689e-56 | -8.615850e-47 |
Msa0189110 | Msa1402400 | 0.803083 | 4.129457e-49 | -8.615850e-47 |
Msa0189110 | Msa1406490 | 0.801458 | 8.919614e-49 | -8.615850e-47 |
Msa0189110 | Msa1407600 | 0.838829 | 2.278955e-57 | -8.615850e-47 |
Msa0189110 | Msa1426910 | 0.813149 | 2.961624e-51 | -8.615850e-47 |
Msa0189110 | Msa1435260 | 0.814985 | 1.165314e-51 | -8.615850e-47 |
Msa0189110 | Msa1437330 | 0.806369 | 8.507812e-50 | -8.615850e-47 |
Msa0189110 | Msa1445030 | 0.827316 | 1.673559e-54 | -8.615850e-47 |
Msa0189110 | Msa1462930 | 0.802434 | 5.619538e-49 | -8.615850e-47 |
Msa0189110 | Msa1466730 | 0.811817 | 5.791813e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0189110 | MtrunA17_Chr2g0277571 | 95.431 | 1182 | 19 | 4 | 1 | 1150 | 1 | 1179 | 0.0 | 2281 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0189110 | AT1G22930.1 | 52.604 | 1152 | 462 | 21 | 30 | 1146 | 25 | 1127 | 0.0 | 1082 |
Msa0189110 | AT1G22930.2 | 51.883 | 1062 | 433 | 18 | 117 | 1146 | 1 | 1016 | 0.0 | 983 |
Msa0189110 | AT4G09150.2 | 44.931 | 1164 | 542 | 20 | 8 | 1146 | 4 | 1093 | 0.0 | 877 |
Msa0189110 | AT4G09150.1 | 50.749 | 534 | 245 | 7 | 8 | 538 | 4 | 522 | 6.61e-141 | 454 |
Find 270 sgRNAs with CRISPR-Local
Find 441 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATATCATCCTTCCAGCTTAT+TGG | 0.163476 | 2_1:-4422118 | None:intergenic |
ATTGGTTCTCCTTTGCATTC+TGG | 0.184066 | 2_1:-4423252 | None:intergenic |
AAGTGTCACTTTCCTTAAAA+AGG | 0.198764 | 2_1:-4421654 | None:intergenic |
TCACATGTTCTTCCCATTCT+TGG | 0.215997 | 2_1:-4422986 | None:intergenic |
CTTGGAGTTTGGCTTGTCAT+TGG | 0.216221 | 2_1:-4421547 | None:intergenic |
CAAAGCACGCATAAGATTAA+TGG | 0.227244 | 2_1:+4422827 | Msa0189110:CDS |
CCTGCCTAGCTAAGCGCATC+TGG | 0.230899 | 2_1:-4419499 | None:intergenic |
AAGTTAAGAGATAAAGTTTC+TGG | 0.262553 | 2_1:-4423345 | None:intergenic |
TCTTTGTGCTTATATGATAT+TGG | 0.264256 | 2_1:+4420753 | Msa0189110:CDS |
AATGCCTTTGCAAACAAATA+TGG | 0.269636 | 2_1:+4422891 | Msa0189110:CDS |
CGAAGAGAAGCTTGACTCTA+TGG | 0.269749 | 2_1:-4421680 | None:intergenic |
TCCTGTAAAGTTTAGTGATA+TGG | 0.279904 | 2_1:+4424091 | Msa0189110:three_prime_UTR |
GGGTTTATAATAAACGAGTT+TGG | 0.285059 | 2_1:-4417587 | None:intergenic |
GCAGTTGCTGCCAGAATGTT+AGG | 0.285846 | 2_1:+4423728 | Msa0189110:CDS |
GGTTAAGGATGCTCGATCTT+TGG | 0.289741 | 2_1:+4421011 | Msa0189110:CDS |
GTTTGTCCTTGAACAGATTC+AGG | 0.289816 | 2_1:+4422485 | Msa0189110:CDS |
GGCCTTTATTATCTCCTCAT+TGG | 0.301242 | 2_1:-4422367 | None:intergenic |
TCCGCTATCCTTTACTCTTA+AGG | 0.307130 | 2_1:-4421521 | None:intergenic |
ATCCAAGCTAGTATAATAAT+TGG | 0.309646 | 2_1:-4420581 | None:intergenic |
ACCATATCACTAAACTTTAC+AGG | 0.309808 | 2_1:-4424092 | None:intergenic |
GAACATCGTGAAGGACTTCT+TGG | 0.314155 | 2_1:-4418575 | None:intergenic |
GTGGAGTTGGGCTTGGAGTT+TGG | 0.319271 | 2_1:-4421558 | None:intergenic |
AGTTGTAAGCTGTTCATCTT+AGG | 0.325225 | 2_1:+4424067 | Msa0189110:three_prime_UTR |
CTTTGTGCTTATATGATATT+GGG | 0.325531 | 2_1:+4420754 | Msa0189110:CDS |
TAAGCTCTTCCCTAACATTC+TGG | 0.327400 | 2_1:-4423738 | None:intergenic |
TCAGACTGTGAAAACTTTGC+TGG | 0.328722 | 2_1:+4420513 | Msa0189110:CDS |
GGGCTTCTTGTAGAACTTCT+AGG | 0.333123 | 2_1:-4420655 | None:intergenic |
TTGGAGTTTGGCTTGTCATT+GGG | 0.336666 | 2_1:-4421546 | None:intergenic |
TTCTTTGCCTGCGAGCCTTT+AGG | 0.337500 | 2_1:-4419640 | None:intergenic |
GGTTTATAATAAACGAGTTT+GGG | 0.339936 | 2_1:-4417586 | None:intergenic |
ACATTGATCACCTTCTTAAA+CGG | 0.344539 | 2_1:+4420605 | Msa0189110:CDS |
CTTTGCGTGGAGTTGTGCTT+GGG | 0.345421 | 2_1:+4423810 | Msa0189110:CDS |
TCGATCTTTGGAGGATGATT+TGG | 0.346054 | 2_1:+4421023 | Msa0189110:CDS |
GTTACTTCGTTGAATTGTTA+TGG | 0.347562 | 2_1:+4417951 | Msa0189110:exon |
AGACAATGGAGAAGGCCTTT+TGG | 0.350108 | 2_1:+4421999 | Msa0189110:CDS |
TTCAACTCATGGAAGAGGTT+AGG | 0.352823 | 2_1:+4422074 | Msa0189110:CDS |
GACAAAGAGCTGAATATATC+AGG | 0.356166 | 2_1:+4420050 | Msa0189110:CDS |
ATTAATGGAGCCTTTGCTTA+AGG | 0.356621 | 2_1:+4422842 | Msa0189110:CDS |
TTGAAATATTTCTTTCGCTT+GGG | 0.362058 | 2_1:-4421597 | None:intergenic |
TGAGTATTTGAACTGGTAAT+AGG | 0.365020 | 2_1:-4421703 | None:intergenic |
GTGGTTATGCGTTCGAGAAT+TGG | 0.365097 | 2_1:+4420089 | Msa0189110:CDS |
TATCTAAAGGTGCTTAAATC+AGG | 0.366034 | 2_1:+4422270 | Msa0189110:intron |
CAAGAGTTGTTCTGCACACT+TGG | 0.368784 | 2_1:-4423597 | None:intergenic |
GCTTAAGGGACCTGCTGGTC+TGG | 0.369935 | 2_1:+4422857 | Msa0189110:CDS |
GCATAGTAATGCCTTGTGTT+TGG | 0.373406 | 2_1:-4422388 | None:intergenic |
TTAATGGAGCCTTTGCTTAA+GGG | 0.378720 | 2_1:+4422843 | Msa0189110:CDS |
AGCCTTCGTCGGAGTCGTTT+CGG | 0.382352 | 2_1:-4418066 | None:intergenic |
GACTCGAGAGAGCAAATATA+AGG | 0.384281 | 2_1:+4419709 | Msa0189110:CDS |
AAAAGGTGAAGGACTTGTTT+GGG | 0.384630 | 2_1:-4417607 | None:intergenic |
CTGTGAAAACTTTGCTGGAC+CGG | 0.387801 | 2_1:+4420518 | Msa0189110:CDS |
TGTTTGATTCATCTCTAGAT+TGG | 0.388525 | 2_1:-4422428 | None:intergenic |
ATGTGTTGTAGCCTTGGTTA+AGG | 0.396148 | 2_1:+4422455 | Msa0189110:CDS |
AAATGGCACTACTGAAAGTT+GGG | 0.396482 | 2_1:+4423864 | Msa0189110:CDS |
GGTGCTTAAATCAGGTCAAC+TGG | 0.397346 | 2_1:+4422278 | Msa0189110:intron |
TGGGAGGAAATTAGCTGAAA+TGG | 0.400072 | 2_1:+4423847 | Msa0189110:CDS |
GGTGCACGCTAAAGTCTTGC+AGG | 0.400289 | 2_1:+4419814 | Msa0189110:CDS |
CTTCCATGAGTTGAATAATC+TGG | 0.402422 | 2_1:-4422066 | None:intergenic |
ATCAAAACGACTTCAGTTGC+TGG | 0.402646 | 2_1:+4419775 | Msa0189110:CDS |
TTTATTATCTCCTCATTGGC+TGG | 0.404642 | 2_1:-4422363 | None:intergenic |
TTTGAAATATTTCTTTCGCT+TGG | 0.407293 | 2_1:-4421598 | None:intergenic |
CATTGATCACCTTCTTAAAC+GGG | 0.408961 | 2_1:+4420606 | Msa0189110:CDS |
AGTTAAACAATAGCTTATCT+AGG | 0.410401 | 2_1:+4420704 | Msa0189110:CDS |
AGTAGCAAGCTCTGCAGATA+TGG | 0.417016 | 2_1:+4423562 | Msa0189110:CDS |
TGTGTTGTAGCCTTGGTTAA+GGG | 0.419531 | 2_1:+4422456 | Msa0189110:CDS |
CCTTCAACTACTCTCAGAAC+TGG | 0.419817 | 2_1:+4423050 | Msa0189110:CDS |
TTGAATAATCTGGTCATAGT+TGG | 0.419886 | 2_1:-4422056 | None:intergenic |
TTCAGCTAATTTCCTCCCAC+TGG | 0.421425 | 2_1:-4423843 | None:intergenic |
TCAACTCATGGAAGAGGTTA+GGG | 0.422456 | 2_1:+4422075 | Msa0189110:CDS |
AACAAATTCTTGAGCAGACT+TGG | 0.423461 | 2_1:-4420827 | None:intergenic |
CGCCAGACTGAGGTCTCTCC+AGG | 0.424726 | 2_1:+4423368 | Msa0189110:CDS |
GGGGAAGTGGGGCCAGTGGG+AGG | 0.426486 | 2_1:+4423831 | Msa0189110:CDS |
TCATTTACAAGAACCTCGTT+TGG | 0.427156 | 2_1:-4421757 | None:intergenic |
GCAAATGAGCGCGTGAAGCT+TGG | 0.428386 | 2_1:+4419566 | Msa0189110:CDS |
GCTTTGCGTGGAGTTGTGCT+TGG | 0.428833 | 2_1:+4423809 | Msa0189110:CDS |
CCAGATGCGCTTAGCTAGGC+AGG | 0.430057 | 2_1:+4419499 | Msa0189110:CDS |
CTCTGAGGCGGCTCTCAAAC+CGG | 0.434280 | 2_1:-4420537 | None:intergenic |
GACGAAGGCATATGCCGTGC+TGG | 0.436897 | 2_1:+4420417 | Msa0189110:CDS |
GCTGATATTGAAGACATTGT+AGG | 0.436983 | 2_1:+4423644 | Msa0189110:CDS |
TGATTTAGATATTCTGTCTC+AGG | 0.442114 | 2_1:+4422153 | Msa0189110:CDS |
CCTGATGGTTCAAATACTAA+AGG | 0.442656 | 2_1:+4423119 | Msa0189110:CDS |
ATTGTACTGAAAACTGCATC+TGG | 0.442866 | 2_1:-4420781 | None:intergenic |
AGCCAATGAGGAGATAATAA+AGG | 0.443152 | 2_1:+4422365 | Msa0189110:CDS |
AATTGTTATGGCGGCGGGAG+TGG | 0.444156 | 2_1:+4417963 | Msa0189110:exon |
TGCCAATTATTATACTAGCT+TGG | 0.444866 | 2_1:+4420579 | Msa0189110:CDS |
AAGTTAGTAAGTGGAATATC+TGG | 0.445642 | 2_1:+4423303 | Msa0189110:CDS |
GCATCTGGGCCTTCGTCAAA+AGG | 0.446065 | 2_1:-4419484 | None:intergenic |
TGCAATCTGCCATCAGTTGA+CGG | 0.446093 | 2_1:+4423674 | Msa0189110:CDS |
TACGGAATCTGCTACCGTTA+CGG | 0.446758 | 2_1:+4417914 | Msa0189110:five_prime_UTR |
GAAATGGCACTACTGAAAGT+TGG | 0.447095 | 2_1:+4423863 | Msa0189110:CDS |
TAAAGGCTCGCAGGCAAAGA+AGG | 0.447389 | 2_1:+4419642 | Msa0189110:CDS |
GGGCGAGCGTGAAATTGCTT+TGG | 0.447463 | 2_1:+4420804 | Msa0189110:CDS |
TCGATTTCTTCCACCGAACT+CGG | 0.448697 | 2_1:-4418111 | None:intergenic |
TAATCTTCTGAATTTGAGCC+TGG | 0.449755 | 2_1:-4423386 | None:intergenic |
CAAATGAGCGCGTGAAGCTT+GGG | 0.449988 | 2_1:+4419567 | Msa0189110:CDS |
AGCCTCACAACAAGATCAAT+TGG | 0.450301 | 2_1:-4423270 | None:intergenic |
TCGCCGTCGTTGCTCCGTTA+CGG | 0.450313 | 2_1:+4417896 | Msa0189110:five_prime_UTR |
CTGCTGGTCTGGACTACCTT+AGG | 0.450452 | 2_1:+4422868 | Msa0189110:CDS |
TATTTGCGTGCATATAAGAA+TGG | 0.451725 | 2_1:-4424230 | None:intergenic |
AGAAGAGCAAACTGCTCAAA+TGG | 0.452623 | 2_1:-4420469 | None:intergenic |
CCTTTAGTATTTGAACCATC+AGG | 0.454225 | 2_1:-4423119 | None:intergenic |
ATTGATCTTGTTGTGAGGCT+TGG | 0.456918 | 2_1:+4423273 | Msa0189110:CDS |
GTAGAAAGTGGAGTTGGGCT+TGG | 0.457503 | 2_1:-4421565 | None:intergenic |
AGTTTCTGGTAGATCATCTT+GGG | 0.459088 | 2_1:-4423331 | None:intergenic |
GCTTCACGCGCTCATTTGCA+TGG | 0.462233 | 2_1:-4419562 | None:intergenic |
GGCGGCGGGAGTGGAATTAC+CGG | 0.470230 | 2_1:+4417972 | Msa0189110:CDS |
TATGAAAGCTATTCAGCATC+AGG | 0.470987 | 2_1:+4421125 | Msa0189110:CDS |
CAAGTGTGCAGAACAACTCT+TGG | 0.472505 | 2_1:+4423598 | Msa0189110:CDS |
ATGCACCTGAGTGGAGATGC+TGG | 0.472865 | 2_1:+4421454 | Msa0189110:CDS |
AAGCTAGTATAATAATTGGC+AGG | 0.473222 | 2_1:-4420577 | None:intergenic |
TCAGTTGACGGTGAAGATGC+AGG | 0.478387 | 2_1:+4423686 | Msa0189110:CDS |
CTGCCTAGCTAAGCGCATCT+GGG | 0.479809 | 2_1:-4419498 | None:intergenic |
CGTTGAATTGTTATGGCGGC+GGG | 0.479837 | 2_1:+4417958 | Msa0189110:exon |
GGAGTGTAAGTCACCGAGTT+CGG | 0.480480 | 2_1:+4418098 | Msa0189110:CDS |
CCTTTGCTTAAGGGACCTGC+TGG | 0.480995 | 2_1:+4422852 | Msa0189110:CDS |
ACTATATCAGTTGGTGTTCA+CGG | 0.481707 | 2_1:+4423944 | Msa0189110:CDS |
AAGTTTCTGGTAGATCATCT+TGG | 0.481739 | 2_1:-4423332 | None:intergenic |
AATATTATGCTCAAAAGTAC+TGG | 0.483848 | 2_1:+4423077 | Msa0189110:CDS |
AGTGGAATCACGTGTTCAGC+AGG | 0.486274 | 2_1:+4419595 | Msa0189110:CDS |
ATCTAGATCCTTAAGAGTAA+AGG | 0.486331 | 2_1:+4421513 | Msa0189110:CDS |
GGATCTTGGTCAGCGATTAG+AGG | 0.486551 | 2_1:+4418610 | Msa0189110:CDS |
TGAATAATCTGGTCATAGTT+GGG | 0.489027 | 2_1:-4422055 | None:intergenic |
CTTCTTTAAGGTGCTGGAGG+CGG | 0.489191 | 2_1:+4420362 | Msa0189110:intron |
TCATCTCAGGATGAGGATCT+TGG | 0.490772 | 2_1:+4418596 | Msa0189110:CDS |
CAATGCATGTGTTGTAGCCT+TGG | 0.491792 | 2_1:+4422449 | Msa0189110:CDS |
GCAACAGTAGAAAGTGGAGT+TGG | 0.492864 | 2_1:-4421571 | None:intergenic |
TAGAGCAGCTTGCCAGCTTG+AGG | 0.496691 | 2_1:+4421047 | Msa0189110:CDS |
TAATAGAATGCTTATCCTAA+AGG | 0.498395 | 2_1:+4419625 | Msa0189110:CDS |
ACGAAGGCATATGCCGTGCT+GGG | 0.499605 | 2_1:+4420418 | Msa0189110:CDS |
CCAGTTCTGAGAGTAGTTGA+AGG | 0.500604 | 2_1:-4423050 | None:intergenic |
TCCTTCACGATGTTCATCTC+AGG | 0.503488 | 2_1:+4418583 | Msa0189110:CDS |
CAACAGTAGAAAGTGGAGTT+GGG | 0.504008 | 2_1:-4421570 | None:intergenic |
TGTTATGGAATCTGTTAAGC+AGG | 0.504226 | 2_1:+4422027 | Msa0189110:CDS |
GACACACCTGAATCTGTTCA+AGG | 0.507477 | 2_1:-4422491 | None:intergenic |
ATTTGCGTGCATATAAGAAT+GGG | 0.507723 | 2_1:-4424229 | None:intergenic |
TCAGATTATTATGAGTGAAA+AGG | 0.510180 | 2_1:+4423538 | Msa0189110:CDS |
TTCCATAACACTATCCCAAA+AGG | 0.513046 | 2_1:-4422014 | None:intergenic |
ACAAAGCTCTCTCTCGAAGC+TGG | 0.513379 | 2_1:+4417683 | Msa0189110:five_prime_UTR |
ATAGCTTATCTAGGTTATCA+AGG | 0.513478 | 2_1:+4420713 | Msa0189110:CDS |
GAAGAGAAGCTTGACTCTAT+GGG | 0.515538 | 2_1:-4421679 | None:intergenic |
AGAAGAAGAAGAAATTAGAA+CGG | 0.515731 | 2_1:-4417760 | None:intergenic |
GTGAGATGGCTCCAATAAGC+TGG | 0.516218 | 2_1:+4422107 | Msa0189110:CDS |
TAAGGATGCTCGATCTTTGG+AGG | 0.517564 | 2_1:+4421014 | Msa0189110:CDS |
ACTTGCAAGTTAACTTCAGA+AGG | 0.519558 | 2_1:+4421084 | Msa0189110:CDS |
CAGTTGGTGTTCACGGGCCA+TGG | 0.519673 | 2_1:+4423951 | Msa0189110:CDS |
CTATATCAGTTGGTGTTCAC+GGG | 0.519695 | 2_1:+4423945 | Msa0189110:CDS |
AGGCCCAGATGCGCTTAGCT+AGG | 0.520214 | 2_1:+4419495 | Msa0189110:CDS |
TCATGCTCAAATTCGTAGAC+AGG | 0.520852 | 2_1:+4418146 | Msa0189110:CDS |
CTAAGGTAGTCCAGACCAGC+AGG | 0.520955 | 2_1:-4422867 | None:intergenic |
CTTCAACTACTCTCAGAACT+GGG | 0.522517 | 2_1:+4423051 | Msa0189110:CDS |
GTGAACACCAACTGATATAG+TGG | 0.523402 | 2_1:-4423942 | None:intergenic |
CAAAACTACGGTGATGCTCA+TGG | 0.524225 | 2_1:-4421786 | None:intergenic |
AGTAGTTGAAGGAAGCCCTT+GGG | 0.525794 | 2_1:-4423039 | None:intergenic |
TGCTGGAAGCTGAGAAGAAG+AGG | 0.527661 | 2_1:+4419792 | Msa0189110:CDS |
TACCGAAACGACTCCGACGA+AGG | 0.527800 | 2_1:+4418064 | Msa0189110:CDS |
AAGTTAACTTCAGAAGGAGT+TGG | 0.528728 | 2_1:+4421090 | Msa0189110:CDS |
TGTGAATTCCTCCTCAGCAT+TGG | 0.530126 | 2_1:+4423004 | Msa0189110:CDS |
TAGGGAAGAGCTTACAAGCT+GGG | 0.531041 | 2_1:+4423747 | Msa0189110:CDS |
AGCCTGGAGAGACCTCAGTC+TGG | 0.531766 | 2_1:-4423370 | None:intergenic |
ATATGCCTTCGTCAAGGTAA+AGG | 0.532947 | 2_1:-4420407 | None:intergenic |
TGCTTATCCTAAAGGCTCGC+AGG | 0.536232 | 2_1:+4419633 | Msa0189110:CDS |
GGTTTGCTGAAGTTAGTAAG+TGG | 0.537597 | 2_1:+4423294 | Msa0189110:CDS |
ACTGAGCTGAGTATTTGAAC+TGG | 0.538751 | 2_1:-4421710 | None:intergenic |
GAAGGGCATCTCTTAGAGAA+AGG | 0.539061 | 2_1:+4419660 | Msa0189110:CDS |
AGCAGCAAGCTGTGATCTGA+AGG | 0.542055 | 2_1:-4420941 | None:intergenic |
GATTATTCAACTCATGGAAG+AGG | 0.543798 | 2_1:+4422069 | Msa0189110:CDS |
CCGACGAAGGCTTCTAGATA+CGG | 0.543833 | 2_1:+4418077 | Msa0189110:CDS |
CTGGGGATGCTGTGTTTGAG+AGG | 0.545867 | 2_1:+4423765 | Msa0189110:CDS |
AGACAGAATATCTAAATCAA+TGG | 0.546424 | 2_1:-4422149 | None:intergenic |
TTGGATTACAATGTCAAAGC+AGG | 0.547212 | 2_1:+4420108 | Msa0189110:CDS |
TGACCAGATTATTCAACTCA+TGG | 0.548277 | 2_1:+4422063 | Msa0189110:CDS |
CGTGAAGCTTGGGACAAAAG+TGG | 0.555129 | 2_1:+4419577 | Msa0189110:CDS |
TAGAAGTTCTACAAGAAGCC+CGG | 0.557892 | 2_1:+4420657 | Msa0189110:CDS |
TCAGTTAAATATTTATACCA+TGG | 0.558194 | 2_1:-4423968 | None:intergenic |
TAGGGATGAAATTTGTGAGA+TGG | 0.559614 | 2_1:+4422093 | Msa0189110:CDS |
GAGTAGTTGAAGGAAGCCCT+TGG | 0.561462 | 2_1:-4423040 | None:intergenic |
TCGTTGAATTGTTATGGCGG+CGG | 0.562616 | 2_1:+4417957 | Msa0189110:exon |
AGATCCATATTTGTTTGCAA+AGG | 0.563460 | 2_1:-4422895 | None:intergenic |
ATCTTTCCAGAAAACTAGCA+AGG | 0.564319 | 2_1:+4420137 | Msa0189110:CDS |
GAATCATCGAAGCCTCAAGC+TGG | 0.565668 | 2_1:-4421059 | None:intergenic |
ATCACGTGTTCAGCAGGCTG+AGG | 0.566237 | 2_1:+4419601 | Msa0189110:CDS |
GCATCTTCACCGTCAACTGA+TGG | 0.568336 | 2_1:-4423683 | None:intergenic |
GGTGCTGGAGGCGGTTCTCG+AGG | 0.570699 | 2_1:+4420371 | Msa0189110:intron |
AAAGGCTCGCAGGCAAAGAA+GGG | 0.571629 | 2_1:+4419643 | Msa0189110:CDS |
CAATCCCAGCATCTCCACTC+AGG | 0.572389 | 2_1:-4421459 | None:intergenic |
TTGGCTGATAATTCATCCCA+AGG | 0.573407 | 2_1:+4423023 | Msa0189110:CDS |
TTACTTCTTTAAGGTGCTGG+AGG | 0.573749 | 2_1:+4420359 | Msa0189110:intron |
AGCTAGTATAATAATTGGCA+GGG | 0.575206 | 2_1:-4420576 | None:intergenic |
TTTCACTCATAATAATCTGA+CGG | 0.575687 | 2_1:-4423535 | None:intergenic |
CAGTTGCTGCCAGAATGTTA+GGG | 0.575971 | 2_1:+4423729 | Msa0189110:CDS |
GGGAGGCAACCCGTTTAAGA+AGG | 0.576797 | 2_1:-4420615 | None:intergenic |
GCTTTCTTCTCCAGCCAATG+AGG | 0.578628 | 2_1:+4422353 | Msa0189110:CDS |
AGAGAGGTACTAGCATCAGA+TGG | 0.580561 | 2_1:-4422918 | None:intergenic |
CCATCAGGAGAAAAGACCAT+TGG | 0.581401 | 2_1:-4423104 | None:intergenic |
TGTTTGCAAAGGCATTCCTA+AGG | 0.582243 | 2_1:-4422884 | None:intergenic |
GTGTAAGTCACCGAGTTCGG+TGG | 0.585239 | 2_1:+4418101 | Msa0189110:CDS |
TCCTTCTCTCAATCTCACGC+TGG | 0.586409 | 2_1:-4419865 | None:intergenic |
GCTGTCTATTCAGCTTTGCG+TGG | 0.587735 | 2_1:+4423797 | Msa0189110:CDS |
ACGATGTTCATCTCAGGATG+AGG | 0.588780 | 2_1:+4418589 | Msa0189110:CDS |
CTGATAAAGATTATACAAGA+GGG | 0.588879 | 2_1:+4420865 | Msa0189110:CDS |
AGAGATTCATCATCTCCGAT+TGG | 0.589231 | 2_1:-4418024 | None:intergenic |
ATTGTGATGGAATTTCCAAT+CGG | 0.589403 | 2_1:+4418009 | Msa0189110:CDS |
GCTGATAAAGATTATACAAG+AGG | 0.589849 | 2_1:+4420864 | Msa0189110:CDS |
TGATGAATCTCTGTCATCGC+CGG | 0.590050 | 2_1:+4418035 | Msa0189110:CDS |
CAAAAGTACTGGCAGTCCAA+TGG | 0.592198 | 2_1:+4423088 | Msa0189110:CDS |
GCACTACTGAAAGTTGGGGC+TGG | 0.592476 | 2_1:+4423869 | Msa0189110:CDS |
GGGCTTGCAACAGTAGAAAG+TGG | 0.596161 | 2_1:-4421577 | None:intergenic |
CAGTTGACGGTGAAGATGCA+GGG | 0.597673 | 2_1:+4423687 | Msa0189110:CDS |
TTAGGGAAGAGCTTACAAGC+TGG | 0.601032 | 2_1:+4423746 | Msa0189110:CDS |
CAACTGGATGTCGATTACCT+TGG | 0.603115 | 2_1:+4422294 | Msa0189110:CDS |
AGATGCTGGGATTGAGCGCA+TGG | 0.603145 | 2_1:+4421468 | Msa0189110:CDS |
CAAAGCCATCAGCAAAACTA+CGG | 0.603888 | 2_1:-4421798 | None:intergenic |
AATCAAACAGACAATGGAGA+AGG | 0.605188 | 2_1:+4421991 | Msa0189110:CDS |
GGGTAAAATCAAACAGACAA+TGG | 0.605711 | 2_1:+4421985 | Msa0189110:intron |
TGCTCTGACTGAAAGTGTAG+TGG | 0.606245 | 2_1:+4423892 | Msa0189110:CDS |
TGCAAGCCGCTGAACAGAAG+AGG | 0.607721 | 2_1:+4418639 | Msa0189110:CDS |
GATAATAAAGGCCAAACACA+AGG | 0.607954 | 2_1:+4422377 | Msa0189110:CDS |
AACCAATTGATCTTGTTGTG+AGG | 0.608729 | 2_1:+4423268 | Msa0189110:CDS |
TTACACACATATATGTGCAT+AGG | 0.611037 | 2_1:+4424035 | Msa0189110:three_prime_UTR |
AAGAGAAGCTTGACTCTATG+GGG | 0.612046 | 2_1:-4421678 | None:intergenic |
GTGGCAGCCACTATATCAGT+TGG | 0.613312 | 2_1:+4423935 | Msa0189110:CDS |
ATTCCGTAACGGAGCAACGA+CGG | 0.613992 | 2_1:-4417899 | None:intergenic |
ATTATCAGCCAATGCTGAGG+AGG | 0.614892 | 2_1:-4423012 | None:intergenic |
TGACGGTGAAGATGCAGGGA+AGG | 0.615541 | 2_1:+4423691 | Msa0189110:CDS |
CCAGCAGGTCCCTTAAGCAA+AGG | 0.619703 | 2_1:-4422852 | None:intergenic |
AGTCTTGCAGGCGAGACATG+TGG | 0.619807 | 2_1:+4419826 | Msa0189110:CDS |
TGCACCTGAGTGGAGATGCT+GGG | 0.620777 | 2_1:+4421455 | Msa0189110:CDS |
CTCTTAACTTCGCCAGACTG+AGG | 0.623175 | 2_1:+4423358 | Msa0189110:CDS |
AGGGAAGAGCTTACAAGCTG+GGG | 0.623286 | 2_1:+4423748 | Msa0189110:CDS |
AGTCGTTTCGGTAATCTCAC+CGG | 0.625397 | 2_1:-4418054 | None:intergenic |
TGGGGATGCTGTGTTTGAGA+GGG | 0.625999 | 2_1:+4423766 | Msa0189110:CDS |
CTATGAGAAACTTTCAAGCA+AGG | 0.627877 | 2_1:+4418541 | Msa0189110:CDS |
TTTGCGTGGAGTTGTGCTTG+GGG | 0.629888 | 2_1:+4423811 | Msa0189110:CDS |
TTTCTCGTTGATCCCCAGCA+CGG | 0.629898 | 2_1:-4420431 | None:intergenic |
GGCGGGAGTGGAATTACCGG+AGG | 0.630317 | 2_1:+4417975 | Msa0189110:CDS |
CACGGCATATGCCTTCGTCA+AGG | 0.631359 | 2_1:-4420413 | None:intergenic |
TGGCTGATAATTCATCCCAA+GGG | 0.634521 | 2_1:+4423024 | Msa0189110:CDS |
CGAAGGCATATGCCGTGCTG+GGG | 0.635521 | 2_1:+4420419 | Msa0189110:CDS |
TGAATTATCAGCCAATGCTG+AGG | 0.641122 | 2_1:-4423015 | None:intergenic |
AACCCACCTCTTCTGTTCAG+CGG | 0.641137 | 2_1:-4418645 | None:intergenic |
TCAACTACTCTCAGAACTGG+GGG | 0.641856 | 2_1:+4423053 | Msa0189110:CDS |
AACAACCTTTACCTTGACGA+AGG | 0.642137 | 2_1:+4420402 | Msa0189110:CDS |
GCTGGAAGCTGAGAAGAAGA+GGG | 0.642650 | 2_1:+4419793 | Msa0189110:CDS |
TTGCGTGGAGTTGTGCTTGG+GGG | 0.647042 | 2_1:+4423812 | Msa0189110:CDS |
ACCAGCGTGAGATTGAGAGA+AGG | 0.647303 | 2_1:+4419864 | Msa0189110:CDS |
TCCTTAAGAGTAAAGGATAG+CGG | 0.647842 | 2_1:+4421520 | Msa0189110:CDS |
GATGGCTCCAATAAGCTGGA+AGG | 0.648279 | 2_1:+4422111 | Msa0189110:CDS |
CCGTATCTAGAAGCCTTCGT+CGG | 0.648602 | 2_1:-4418077 | None:intergenic |
AGGGAAGGTTCAGTCACGAA+AGG | 0.650299 | 2_1:+4423706 | Msa0189110:CDS |
AAAGTTTGTAGCACCAAACG+AGG | 0.652298 | 2_1:+4421744 | Msa0189110:CDS |
CAATATCAGCATCTTCAACA+CGG | 0.654236 | 2_1:-4423631 | None:intergenic |
GAAAAGGTGATGCACCTGAG+TGG | 0.655329 | 2_1:+4421445 | Msa0189110:CDS |
TCCTGAGATGAACATCGTGA+AGG | 0.660871 | 2_1:-4418584 | None:intergenic |
GGTCATCTCAGTCATTGATG+AGG | 0.661342 | 2_1:+4419681 | Msa0189110:CDS |
CAACAGCTGTAAACACTCTG+AGG | 0.662054 | 2_1:-4420552 | None:intergenic |
GATCAGCAACCAGAATGCAA+AGG | 0.662463 | 2_1:+4423243 | Msa0189110:CDS |
CAGCTGTAAACACTCTGAGG+CGG | 0.662505 | 2_1:-4420549 | None:intergenic |
ACTTCGTTGAATTGTTATGG+CGG | 0.663608 | 2_1:+4417954 | Msa0189110:exon |
TTCAACTACTCTCAGAACTG+GGG | 0.664299 | 2_1:+4423052 | Msa0189110:CDS |
GCTGAATATATCAGGCAGAG+AGG | 0.672176 | 2_1:+4420058 | Msa0189110:CDS |
AGAGAAGCTTGACTCTATGG+GGG | 0.681993 | 2_1:-4421677 | None:intergenic |
GATCGTAACAAACTCCGTAA+CGG | 0.682958 | 2_1:-4417928 | None:intergenic |
TCACATTCAAAACAGCGTTG+AGG | 0.693258 | 2_1:+4421831 | Msa0189110:CDS |
AAACTGCAAACCCTTAACCA+AGG | 0.697818 | 2_1:-4422466 | None:intergenic |
TGATAAAGATTATACAAGAG+GGG | 0.699828 | 2_1:+4420866 | Msa0189110:CDS |
AACGGTAGCAGATTCCGTAA+CGG | 0.702517 | 2_1:-4417910 | None:intergenic |
AATGGCACTACTGAAAGTTG+GGG | 0.705403 | 2_1:+4423865 | Msa0189110:CDS |
GCGGGAGTGGAATTACCGGA+GGG | 0.709899 | 2_1:+4417976 | Msa0189110:CDS |
AGGCAGAGAGGAAGACTGCG+TGG | 0.717587 | 2_1:+4420070 | Msa0189110:CDS |
AGATTATTGTGATATCCACA+AGG | 0.732314 | 2_1:+4423403 | Msa0189110:CDS |
GAGCAATAAGACAAGCCGAG+TGG | 0.734191 | 2_1:+4421624 | Msa0189110:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTATGAATTGAAAAA+AGG | - | chr2_1:4417627-4417646 | None:intergenic | 10.0% |
!!! | ATCATAAAATAGTAATTTTT+TGG | + | chr2_1:4419049-4419068 | Msa0189110:intron | 10.0% |
!!! | GTGTTATTTTTTATTTTTTT+TGG | + | chr2_1:4419928-4419947 | Msa0189110:intron | 10.0% |
!!! | TTGATTAAACAAATTTTAAT+TGG | - | chr2_1:4422562-4422581 | None:intergenic | 10.0% |
!! | TATATAATAATTAAGTGAAA+GGG | - | chr2_1:4422601-4422620 | None:intergenic | 10.0% |
!! | ATATATAATAATTAAGTGAA+AGG | - | chr2_1:4422602-4422621 | None:intergenic | 10.0% |
!! | TTTCACTTAATTATTATATA+TGG | + | chr2_1:4422601-4422620 | Msa0189110:intron | 10.0% |
!! | TTCACTTAATTATTATATAT+GGG | + | chr2_1:4422602-4422621 | Msa0189110:intron | 10.0% |
!! | AAAAATATGAAAAATTGATG+TGG | - | chr2_1:4417826-4417845 | None:intergenic | 15.0% |
!!! | TTATTATTTTTTCATTCGTA+CGG | + | chr2_1:4417860-4417879 | Msa0189110:five_prime_UTR | 15.0% |
!!! | CAAAGTTAATTTTTTTAGAA+AGG | - | chr2_1:4418185-4418204 | None:intergenic | 15.0% |
!! | CTAGTAAAAATTTGAAAAAA+TGG | + | chr2_1:4418717-4418736 | Msa0189110:intron | 15.0% |
!!! | GAATTAAATTTTTCTATGAT+TGG | - | chr2_1:4419282-4419301 | None:intergenic | 15.0% |
!!! | ATTTTTTTAGTTCATCTATT+AGG | + | chr2_1:4420287-4420306 | Msa0189110:intron | 15.0% |
!! | ATTAAAAAAAATCTTAGACA+GGG | - | chr2_1:4421897-4421916 | None:intergenic | 15.0% |
!! | TATTAAAAAAAATCTTAGAC+AGG | - | chr2_1:4421898-4421917 | None:intergenic | 15.0% |
!!! | AATTCAAATTCAAAACATTT+TGG | - | chr2_1:4421943-4421962 | None:intergenic | 15.0% |
!! | TAGATGTATTACATATATTT+AGG | + | chr2_1:4422660-4422679 | Msa0189110:intron | 15.0% |
!! | TTTGGTAAAAAACATAGTTA+GGG | + | chr2_1:4419003-4419022 | Msa0189110:intron | 20.0% |
!! | ATTTAAACTTCTCAAACAAA+AGG | - | chr2_1:4419195-4419214 | None:intergenic | 20.0% |
!!! | CATTTTAATTCTGAAAAGTA+TGG | + | chr2_1:4421282-4421301 | Msa0189110:intron | 20.0% |
!!! | CTTTCAATGTTTTATAATAC+AGG | + | chr2_1:4421396-4421415 | Msa0189110:intron | 20.0% |
!! | TTAAAAAAAATCTTAGACAG+GGG | - | chr2_1:4421896-4421915 | None:intergenic | 20.0% |
!! | GAAATATAGAAATTATAGTG+AGG | - | chr2_1:4422230-4422249 | None:intergenic | 20.0% |
!! | ATTGAAGAGAACAAAAATAA+AGG | - | chr2_1:4422528-4422547 | None:intergenic | 20.0% |
!!! | GTATTACATATATTTAGGAT+TGG | + | chr2_1:4422665-4422684 | Msa0189110:intron | 20.0% |
!! | AAACAAATATAAGCAATAAG+AGG | - | chr2_1:4422745-4422764 | None:intergenic | 20.0% |
!! | TCAGTTAAATATTTATACCA+TGG | - | chr2_1:4423971-4423990 | None:intergenic | 20.0% |
! | GGTTTATAATAAACGAGTTT+GGG | - | chr2_1:4417589-4417608 | None:intergenic | 25.0% |
! | TATGAATTGAAAAAAGGTGA+AGG | - | chr2_1:4417621-4417640 | None:intergenic | 25.0% |
! | AACGGTAGAAAAATTTGAAT+TGG | - | chr2_1:4417745-4417764 | None:intergenic | 25.0% |
! | AGAAGAAGAAGAAATTAGAA+CGG | - | chr2_1:4417763-4417782 | None:intergenic | 25.0% |
! | ACGTGTAAACTATGTAATTA+AGG | - | chr2_1:4418268-4418287 | None:intergenic | 25.0% |
!! | TTAGTAATTACTCTGTTTTG+TGG | - | chr2_1:4418314-4418333 | None:intergenic | 25.0% |
!! | TGATAGTTTCTTCTCTTTTA+AGG | + | chr2_1:4418419-4418438 | Msa0189110:intron | 25.0% |
! | TTGAATGTAATTACATGTGT+TGG | + | chr2_1:4418745-4418764 | Msa0189110:intron | 25.0% |
! | TATTTAAATAGATGCAGAAC+CGG | - | chr2_1:4418851-4418870 | None:intergenic | 25.0% |
!!! | ACAAGTTTTAGACCTATTTT+TGG | + | chr2_1:4418961-4418980 | Msa0189110:intron | 25.0% |
!!! | TTCAAATGCACTTTTTTCTT+TGG | + | chr2_1:4418985-4419004 | Msa0189110:intron | 25.0% |
! | CTTTGGTAAAAAACATAGTT+AGG | + | chr2_1:4419002-4419021 | Msa0189110:intron | 25.0% |
!!! | ATAGTAATTTTTTGGTGTTC+TGG | + | chr2_1:4419057-4419076 | Msa0189110:intron | 25.0% |
! | ATTGACCAATGATAAAGAAA+AGG | - | chr2_1:4419102-4419121 | None:intergenic | 25.0% |
!! | TTTCATACTTTGAGAATCAA+TGG | - | chr2_1:4419376-4419395 | None:intergenic | 25.0% |
! | TAATAGAATGCTTATCCTAA+AGG | + | chr2_1:4419625-4419644 | Msa0189110:CDS | 25.0% |
! | CAAAAATTACACATGTTACA+TGG | + | chr2_1:4419968-4419987 | Msa0189110:intron | 25.0% |
! | TCTGACAATTTACTTCTTTA+AGG | + | chr2_1:4420350-4420369 | Msa0189110:intron | 25.0% |
! | ATCCAAGCTAGTATAATAAT+TGG | - | chr2_1:4420584-4420603 | None:intergenic | 25.0% |
! | AAAAAAATCAGATACAGTCA+AGG | + | chr2_1:4420681-4420700 | Msa0189110:CDS | 25.0% |
! | AGTTAAACAATAGCTTATCT+AGG | + | chr2_1:4420704-4420723 | Msa0189110:CDS | 25.0% |
! | TCTTTGTGCTTATATGATAT+TGG | + | chr2_1:4420753-4420772 | Msa0189110:CDS | 25.0% |
! | CTTTGTGCTTATATGATATT+GGG | + | chr2_1:4420754-4420773 | Msa0189110:CDS | 25.0% |
! | CTGATAAAGATTATACAAGA+GGG | + | chr2_1:4420865-4420884 | Msa0189110:CDS | 25.0% |
! | TGATAAAGATTATACAAGAG+GGG | + | chr2_1:4420866-4420885 | Msa0189110:CDS | 25.0% |
!! | TCTTCATCAGAACTTTTTAT+TGG | - | chr2_1:4420892-4420911 | None:intergenic | 25.0% |
! | ATCAATAACTACCATTGAAA+AGG | - | chr2_1:4421181-4421200 | None:intergenic | 25.0% |
!!! | GAAATTTTCAAGTAATGTCA+TGG | + | chr2_1:4421201-4421220 | Msa0189110:intron | 25.0% |
!! | ATGTTTTTCCCTTTCAATAA+GGG | + | chr2_1:4421317-4421336 | Msa0189110:intron | 25.0% |
!! | TGAAGATCAAAAACTTTTGA+GGG | + | chr2_1:4421423-4421442 | Msa0189110:CDS | 25.0% |
! | TTGAAATATTTCTTTCGCTT+GGG | - | chr2_1:4421600-4421619 | None:intergenic | 25.0% |
!! | TTTGAAATATTTCTTTCGCT+TGG | - | chr2_1:4421601-4421620 | None:intergenic | 25.0% |
! | TAAAAAAAATCTTAGACAGG+GGG | - | chr2_1:4421895-4421914 | None:intergenic | 25.0% |
!! | TCAAATTCAAAACATTTTGG+CGG | - | chr2_1:4421940-4421959 | None:intergenic | 25.0% |
! | AGACAGAATATCTAAATCAA+TGG | - | chr2_1:4422152-4422171 | None:intergenic | 25.0% |
! | AGAGAACAAAAATAAAGGAA+TGG | - | chr2_1:4422523-4422542 | None:intergenic | 25.0% |
!!! | TGCTTATATTTGTTTTACTC+TGG | + | chr2_1:4422750-4422769 | Msa0189110:intron | 25.0% |
!!! | GAATTTTAAAGACCAAGAAT+GGG | + | chr2_1:4422974-4422993 | Msa0189110:intron | 25.0% |
!! | AATATTATGCTCAAAAGTAC+TGG | + | chr2_1:4423077-4423096 | Msa0189110:CDS | 25.0% |
! | AAGTTAAGAGATAAAGTTTC+TGG | - | chr2_1:4423348-4423367 | None:intergenic | 25.0% |
! | TGGTGCTTAATTAGAAATTA+TGG | + | chr2_1:4423491-4423510 | Msa0189110:intron | 25.0% |
! | GGTGCTTAATTAGAAATTAT+GGG | + | chr2_1:4423492-4423511 | Msa0189110:intron | 25.0% |
! | TTTCACTCATAATAATCTGA+CGG | - | chr2_1:4423538-4423557 | None:intergenic | 25.0% |
! | TCAGATTATTATGAGTGAAA+AGG | + | chr2_1:4423538-4423557 | Msa0189110:CDS | 25.0% |
GGGTTTATAATAAACGAGTT+TGG | - | chr2_1:4417590-4417609 | None:intergenic | 30.0% | |
GTTACTTCGTTGAATTGTTA+TGG | + | chr2_1:4417951-4417970 | Msa0189110:exon | 30.0% | |
! | ATTGTGATGGAATTTCCAAT+CGG | + | chr2_1:4418009-4418028 | Msa0189110:CDS | 30.0% |
! | TTTGTTTGGTGAGAAAGTTT+CGG | + | chr2_1:4418214-4418233 | Msa0189110:intron | 30.0% |
GGAGAAAAGTTGAATATTGA+AGG | - | chr2_1:4418247-4418266 | None:intergenic | 30.0% | |
! | GTAATTACATGTGTTGGTAT+CGG | + | chr2_1:4418751-4418770 | Msa0189110:intron | 30.0% |
GACATAAACGTATATGCATT+TGG | - | chr2_1:4418880-4418899 | None:intergenic | 30.0% | |
GTGCATTTGAATCCAAAAAT+AGG | - | chr2_1:4418976-4418995 | None:intergenic | 30.0% | |
!!! | TAATTTTTTGGTGTTCTGGA+TGG | + | chr2_1:4419061-4419080 | Msa0189110:intron | 30.0% |
! | TCAGTCCTTTTCTTTATCAT+TGG | + | chr2_1:4419094-4419113 | Msa0189110:intron | 30.0% |
!! | CACAAACTTCTGAAATTTGA+TGG | + | chr2_1:4419233-4419252 | Msa0189110:intron | 30.0% |
! | TGATTTTCTGCTTTCTTGAT+AGG | + | chr2_1:4419456-4419475 | Msa0189110:intron | 30.0% |
AAGATCGATTACAAAGAGTA+TGG | + | chr2_1:4419906-4419925 | Msa0189110:intron | 30.0% | |
AAATTACACATGTTACATGG+CGG | + | chr2_1:4419971-4419990 | Msa0189110:intron | 30.0% | |
! | CTCCAAATTTTATATTGAGC+AGG | + | chr2_1:4420021-4420040 | Msa0189110:intron | 30.0% |
TGCCTGCTCAATATAAAATT+TGG | - | chr2_1:4420026-4420045 | None:intergenic | 30.0% | |
!!! | AAAAAACCTTGCTAGTTTTC+TGG | - | chr2_1:4420146-4420165 | None:intergenic | 30.0% |
! | GCATATTCTGTTGTTAGTTT+AGG | + | chr2_1:4420188-4420207 | Msa0189110:intron | 30.0% |
TGAGTAAAGCAGTGAAATTA+AGG | - | chr2_1:4420217-4420236 | None:intergenic | 30.0% | |
! | TTACTCAGTTGTAGTCATTT+TGG | + | chr2_1:4420230-4420249 | Msa0189110:intron | 30.0% |
!! | AATTTACTTCTTTAAGGTGC+TGG | + | chr2_1:4420356-4420375 | Msa0189110:intron | 30.0% |
AGCTAGTATAATAATTGGCA+GGG | - | chr2_1:4420579-4420598 | None:intergenic | 30.0% | |
AAGCTAGTATAATAATTGGC+AGG | - | chr2_1:4420580-4420599 | None:intergenic | 30.0% | |
TGCCAATTATTATACTAGCT+TGG | + | chr2_1:4420579-4420598 | Msa0189110:CDS | 30.0% | |
ACATTGATCACCTTCTTAAA+CGG | + | chr2_1:4420605-4420624 | Msa0189110:CDS | 30.0% | |
!!! | ACTGTATCTGATTTTTTTGC+CGG | - | chr2_1:4420679-4420698 | None:intergenic | 30.0% |
ATAGCTTATCTAGGTTATCA+AGG | + | chr2_1:4420713-4420732 | Msa0189110:CDS | 30.0% | |
GCTGATAAAGATTATACAAG+AGG | + | chr2_1:4420864-4420883 | Msa0189110:CDS | 30.0% | |
!! | CTCGTATTTGAATTGTTTTG+TGG | + | chr2_1:4420981-4421000 | Msa0189110:CDS | 30.0% |
!! | ATTTGAATTGTTTTGTGGTC+TGG | + | chr2_1:4420986-4421005 | Msa0189110:CDS | 30.0% |
! | GATGTTTTTCCCTTTCAATA+AGG | + | chr2_1:4421316-4421335 | Msa0189110:intron | 30.0% |
! | TGTTTTTCCCTTTCAATAAG+GGG | + | chr2_1:4421318-4421337 | Msa0189110:intron | 30.0% |
AAGAAAACCCCTTATTGAAA+GGG | - | chr2_1:4421328-4421347 | None:intergenic | 30.0% | |
TGCAATAAGAAAGCAGTTAA+GGG | - | chr2_1:4421351-4421370 | None:intergenic | 30.0% | |
TTGCAATAAGAAAGCAGTTA+AGG | - | chr2_1:4421352-4421371 | None:intergenic | 30.0% | |
! | CTGAAGATCAAAAACTTTTG+AGG | + | chr2_1:4421422-4421441 | Msa0189110:CDS | 30.0% |
!! | TCAAAAACTTTTGAGGGAAA+AGG | + | chr2_1:4421429-4421448 | Msa0189110:CDS | 30.0% |
ATCTAGATCCTTAAGAGTAA+AGG | + | chr2_1:4421513-4421532 | Msa0189110:CDS | 30.0% | |
!! | AGTGTCACTTTCCTTAAAAA+GGG | - | chr2_1:4421656-4421675 | None:intergenic | 30.0% |
!! | AAGTGTCACTTTCCTTAAAA+AGG | - | chr2_1:4421657-4421676 | None:intergenic | 30.0% |
TGAGTATTTGAACTGGTAAT+AGG | - | chr2_1:4421706-4421725 | None:intergenic | 30.0% | |
TAATATAACATCAAAGGCCT+CGG | - | chr2_1:4421871-4421890 | None:intergenic | 30.0% | |
ATTCTCATTCACTCTTAATC+TGG | + | chr2_1:4421960-4421979 | Msa0189110:intron | 30.0% | |
TGAATAATCTGGTCATAGTT+GGG | - | chr2_1:4422058-4422077 | None:intergenic | 30.0% | |
TTGAATAATCTGGTCATAGT+TGG | - | chr2_1:4422059-4422078 | None:intergenic | 30.0% | |
TGATTTAGATATTCTGTCTC+AGG | + | chr2_1:4422153-4422172 | Msa0189110:CDS | 30.0% | |
!! | TATCTAAAGGTGCTTAAATC+AGG | + | chr2_1:4422270-4422289 | Msa0189110:intron | 30.0% |
! | AAAAGTCGAGAATTTTTCCA+AGG | - | chr2_1:4422314-4422333 | None:intergenic | 30.0% |
TGTTTGATTCATCTCTAGAT+TGG | - | chr2_1:4422431-4422450 | None:intergenic | 30.0% | |
AATGCCTTTGCAAACAAATA+TGG | + | chr2_1:4422891-4422910 | Msa0189110:CDS | 30.0% | |
AGATCCATATTTGTTTGCAA+AGG | - | chr2_1:4422898-4422917 | None:intergenic | 30.0% | |
ATTAGAAGAAAGCCATCTAA+GGG | - | chr2_1:4422952-4422971 | None:intergenic | 30.0% | |
AATTAGAAGAAAGCCATCTA+AGG | - | chr2_1:4422953-4422972 | None:intergenic | 30.0% | |
TTAGATGGCTTTCTTCTAAT+TGG | + | chr2_1:4422952-4422971 | Msa0189110:intron | 30.0% | |
!! | GGAATTTTAAAGACCAAGAA+TGG | + | chr2_1:4422973-4422992 | Msa0189110:intron | 30.0% |
! | GTTTTCTGTTACATACTTTG+AGG | + | chr2_1:4423176-4423195 | Msa0189110:intron | 30.0% |
AAGTTAGTAAGTGGAATATC+TGG | + | chr2_1:4423303-4423322 | Msa0189110:CDS | 30.0% | |
AGATTATTGTGATATCCACA+AGG | + | chr2_1:4423403-4423422 | Msa0189110:CDS | 30.0% | |
! | TAATCATGCTATTTACCTTG+TGG | - | chr2_1:4423421-4423440 | None:intergenic | 30.0% |
TAGCATGATTATTTGTGTCA+AGG | + | chr2_1:4423430-4423449 | Msa0189110:intron | 30.0% | |
TTACACACATATATGTGCAT+AGG | + | chr2_1:4424035-4424054 | Msa0189110:three_prime_UTR | 30.0% | |
TCCTGTAAAGTTTAGTGATA+TGG | + | chr2_1:4424091-4424110 | Msa0189110:three_prime_UTR | 30.0% | |
ACCATATCACTAAACTTTAC+AGG | - | chr2_1:4424095-4424114 | None:intergenic | 30.0% | |
! | AAAAGGTGAAGGACTTGTTT+GGG | - | chr2_1:4417610-4417629 | None:intergenic | 35.0% |
! | AAAAAGGTGAAGGACTTGTT+TGG | - | chr2_1:4417611-4417630 | None:intergenic | 35.0% |
ACTTCGTTGAATTGTTATGG+CGG | + | chr2_1:4417954-4417973 | Msa0189110:exon | 35.0% | |
CTATGAGAAACTTTCAAGCA+AGG | + | chr2_1:4418541-4418560 | Msa0189110:CDS | 35.0% | |
TGTAGCACAAGTCACATAAA+TGG | - | chr2_1:4419420-4419439 | None:intergenic | 35.0% | |
GATTGAGAGAAGGAAAAAGA+AGG | + | chr2_1:4419874-4419893 | Msa0189110:CDS | 35.0% | |
AAGGAAAAAGAAGGATGAGT+TGG | + | chr2_1:4419883-4419902 | Msa0189110:CDS | 35.0% | |
GACAAAGAGCTGAATATATC+AGG | + | chr2_1:4420050-4420069 | Msa0189110:CDS | 35.0% | |
TTGGATTACAATGTCAAAGC+AGG | + | chr2_1:4420108-4420127 | Msa0189110:CDS | 35.0% | |
ATCTTTCCAGAAAACTAGCA+AGG | + | chr2_1:4420137-4420156 | Msa0189110:CDS | 35.0% | |
!! | AGTTGTAGTCATTTTGGAGA+AGG | + | chr2_1:4420236-4420255 | Msa0189110:intron | 35.0% |
CATTGATCACCTTCTTAAAC+GGG | + | chr2_1:4420606-4420625 | Msa0189110:CDS | 35.0% | |
!!! | CTGTATCTGATTTTTTTGCC+GGG | - | chr2_1:4420678-4420697 | None:intergenic | 35.0% |
ATTGTACTGAAAACTGCATC+TGG | - | chr2_1:4420784-4420803 | None:intergenic | 35.0% | |
! | AGATGCAGTTTTCAGTACAA+TGG | + | chr2_1:4420783-4420802 | Msa0189110:CDS | 35.0% |
! | GATGCAGTTTTCAGTACAAT+GGG | + | chr2_1:4420784-4420803 | Msa0189110:CDS | 35.0% |
AACAAATTCTTGAGCAGACT+TGG | - | chr2_1:4420830-4420849 | None:intergenic | 35.0% | |
!!! | TTGCTGCTTTTGATAAAGCA+TGG | + | chr2_1:4420956-4420975 | Msa0189110:CDS | 35.0% |
ACTTGCAAGTTAACTTCAGA+AGG | + | chr2_1:4421084-4421103 | Msa0189110:CDS | 35.0% | |
AAGTTAACTTCAGAAGGAGT+TGG | + | chr2_1:4421090-4421109 | Msa0189110:CDS | 35.0% | |
TATGAAAGCTATTCAGCATC+AGG | + | chr2_1:4421125-4421144 | Msa0189110:CDS | 35.0% | |
AAAACTCACAGCTATTGACA+TGG | - | chr2_1:4421158-4421177 | None:intergenic | 35.0% | |
! | CTGTGAGTTTTCCTTTTCAA+TGG | + | chr2_1:4421167-4421186 | Msa0189110:intron | 35.0% |
! | AATCTTACAGTCAGCTTTTG+AGG | - | chr2_1:4421238-4421257 | None:intergenic | 35.0% |
GAAGAAAACCCCTTATTGAA+AGG | - | chr2_1:4421329-4421348 | None:intergenic | 35.0% | |
TCCTTAAGAGTAAAGGATAG+CGG | + | chr2_1:4421520-4421539 | Msa0189110:CDS | 35.0% | |
TCATTTACAAGAACCTCGTT+TGG | - | chr2_1:4421760-4421779 | None:intergenic | 35.0% | |
AATATAACATCAAAGGCCTC+GGG | - | chr2_1:4421870-4421889 | None:intergenic | 35.0% | |
GGGGGATAATATAACATCAA+AGG | - | chr2_1:4421877-4421896 | None:intergenic | 35.0% | |
!! | AAACATTTTGGCGGTAATGA+AGG | - | chr2_1:4421931-4421950 | None:intergenic | 35.0% |
GGGTAAAATCAAACAGACAA+TGG | + | chr2_1:4421985-4422004 | Msa0189110:intron | 35.0% | |
AATCAAACAGACAATGGAGA+AGG | + | chr2_1:4421991-4422010 | Msa0189110:CDS | 35.0% | |
TTCCATAACACTATCCCAAA+AGG | - | chr2_1:4422017-4422036 | None:intergenic | 35.0% | |
TGTTATGGAATCTGTTAAGC+AGG | + | chr2_1:4422027-4422046 | Msa0189110:CDS | 35.0% | |
TGACCAGATTATTCAACTCA+TGG | + | chr2_1:4422063-4422082 | Msa0189110:CDS | 35.0% | |
! | CTTCCATGAGTTGAATAATC+TGG | - | chr2_1:4422069-4422088 | None:intergenic | 35.0% |
GATTATTCAACTCATGGAAG+AGG | + | chr2_1:4422069-4422088 | Msa0189110:CDS | 35.0% | |
TAGGGATGAAATTTGTGAGA+TGG | + | chr2_1:4422093-4422112 | Msa0189110:CDS | 35.0% | |
ATATCATCCTTCCAGCTTAT+TGG | - | chr2_1:4422121-4422140 | None:intergenic | 35.0% | |
ATCTCTCTCTGTGTATCTAA+AGG | + | chr2_1:4422257-4422276 | Msa0189110:intron | 35.0% | |
TTTATTATCTCCTCATTGGC+TGG | - | chr2_1:4422366-4422385 | None:intergenic | 35.0% | |
AGCCAATGAGGAGATAATAA+AGG | + | chr2_1:4422365-4422384 | Msa0189110:CDS | 35.0% | |
GATAATAAAGGCCAAACACA+AGG | + | chr2_1:4422377-4422396 | Msa0189110:CDS | 35.0% | |
! | GCAGCTATATATGAAAGCAT+TGG | - | chr2_1:4422640-4422659 | None:intergenic | 35.0% |
! | TGTACAGTGCAACTATTTTG+TGG | - | chr2_1:4422695-4422714 | None:intergenic | 35.0% |
CAAAGCACGCATAAGATTAA+TGG | + | chr2_1:4422827-4422846 | Msa0189110:CDS | 35.0% | |
ATTAATGGAGCCTTTGCTTA+AGG | + | chr2_1:4422842-4422861 | Msa0189110:CDS | 35.0% | |
TTAATGGAGCCTTTGCTTAA+GGG | + | chr2_1:4422843-4422862 | Msa0189110:CDS | 35.0% | |
CCTTTAGTATTTGAACCATC+AGG | - | chr2_1:4423122-4423141 | None:intergenic | 35.0% | |
CCTGATGGTTCAAATACTAA+AGG | + | chr2_1:4423119-4423138 | Msa0189110:CDS | 35.0% | |
!! | TTTGAGGCAGACACTTATTT+TGG | + | chr2_1:4423192-4423211 | Msa0189110:intron | 35.0% |
TGGTCAAATAAAGTACAGTC+AGG | - | chr2_1:4423220-4423239 | None:intergenic | 35.0% | |
! | TGACTGTACTTTATTTGACC+AGG | + | chr2_1:4423219-4423238 | Msa0189110:intron | 35.0% |
! | AACCAATTGATCTTGTTGTG+AGG | + | chr2_1:4423268-4423287 | Msa0189110:CDS | 35.0% |
!! | AGTTTCTGGTAGATCATCTT+GGG | - | chr2_1:4423334-4423353 | None:intergenic | 35.0% |
!! | AAGTTTCTGGTAGATCATCT+TGG | - | chr2_1:4423335-4423354 | None:intergenic | 35.0% |
TAATCTTCTGAATTTGAGCC+TGG | - | chr2_1:4423389-4423408 | None:intergenic | 35.0% | |
!!! | GCTTTTGTTTTTCTCTCTTC+TGG | + | chr2_1:4423465-4423484 | Msa0189110:intron | 35.0% |
CAATATCAGCATCTTCAACA+CGG | - | chr2_1:4423634-4423653 | None:intergenic | 35.0% | |
GCTGATATTGAAGACATTGT+AGG | + | chr2_1:4423644-4423663 | Msa0189110:CDS | 35.0% | |
AAATGGCACTACTGAAAGTT+GGG | + | chr2_1:4423864-4423883 | Msa0189110:CDS | 35.0% | |
! | ACTATATCAGTTGGTGTTCA+CGG | + | chr2_1:4423944-4423963 | Msa0189110:CDS | 35.0% |
AGTTGTAAGCTGTTCATCTT+AGG | + | chr2_1:4424067-4424086 | Msa0189110:three_prime_UTR | 35.0% | |
GATCGTAACAAACTCCGTAA+CGG | - | chr2_1:4417931-4417950 | None:intergenic | 40.0% | |
GAATTACCGGAGGGTAAAAA+CGG | + | chr2_1:4417985-4418004 | Msa0189110:CDS | 40.0% | |
!! | ACAATTCCGTTTTTACCCTC+CGG | - | chr2_1:4417994-4418013 | None:intergenic | 40.0% |
GGGTAAAAACGGAATTGTGA+TGG | + | chr2_1:4417996-4418015 | Msa0189110:CDS | 40.0% | |
AGAGATTCATCATCTCCGAT+TGG | - | chr2_1:4418027-4418046 | None:intergenic | 40.0% | |
TCATGCTCAAATTCGTAGAC+AGG | + | chr2_1:4418146-4418165 | Msa0189110:CDS | 40.0% | |
CTTTGCGTGTTTCGTTTGTT+TGG | + | chr2_1:4418200-4418219 | Msa0189110:intron | 40.0% | |
AGTACTTCTGCACTCAATAC+AGG | - | chr2_1:4418523-4418542 | None:intergenic | 40.0% | |
ATAAGAGCAAGACCAAAGCA+TGG | - | chr2_1:4418671-4418690 | None:intergenic | 40.0% | |
! | ATGTGTTGGTATCGGATAGT+TGG | + | chr2_1:4418759-4418778 | Msa0189110:intron | 40.0% |
ATAGTGACATGTGTAGGACA+TGG | + | chr2_1:4418788-4418807 | Msa0189110:intron | 40.0% | |
GACTCGAGAGAGCAAATATA+AGG | + | chr2_1:4419709-4419728 | Msa0189110:CDS | 40.0% | |
!!! | CTGAAGTCGTTTTGATTCAG+CGG | - | chr2_1:4419771-4419790 | None:intergenic | 40.0% |
ATCAAAACGACTTCAGTTGC+TGG | + | chr2_1:4419775-4419794 | Msa0189110:CDS | 40.0% | |
AGGCAAAACTGAAGTGCAAT+AGG | + | chr2_1:4420307-4420326 | Msa0189110:intron | 40.0% | |
!! | TTACTTCTTTAAGGTGCTGG+AGG | + | chr2_1:4420359-4420378 | Msa0189110:intron | 40.0% |
AACAACCTTTACCTTGACGA+AGG | + | chr2_1:4420402-4420421 | Msa0189110:CDS | 40.0% | |
ATATGCCTTCGTCAAGGTAA+AGG | - | chr2_1:4420410-4420429 | None:intergenic | 40.0% | |
AGAAGAGCAAACTGCTCAAA+TGG | - | chr2_1:4420472-4420491 | None:intergenic | 40.0% | |
TCAGACTGTGAAAACTTTGC+TGG | + | chr2_1:4420513-4420532 | Msa0189110:CDS | 40.0% | |
TAGAAGTTCTACAAGAAGCC+CGG | + | chr2_1:4420657-4420676 | Msa0189110:CDS | 40.0% | |
!! | GAATTGTTTTGTGGTCTGGA+AGG | + | chr2_1:4420990-4421009 | Msa0189110:CDS | 40.0% |
! | TTTTGTGGTCTGGAAGGTTA+AGG | + | chr2_1:4420996-4421015 | Msa0189110:CDS | 40.0% |
! | TCGATCTTTGGAGGATGATT+TGG | + | chr2_1:4421023-4421042 | Msa0189110:CDS | 40.0% |
TCCGCTATCCTTTACTCTTA+AGG | - | chr2_1:4421524-4421543 | None:intergenic | 40.0% | |
!! | TTGGAGTTTGGCTTGTCATT+GGG | - | chr2_1:4421549-4421568 | None:intergenic | 40.0% |
AAGAGAAGCTTGACTCTATG+GGG | - | chr2_1:4421681-4421700 | None:intergenic | 40.0% | |
GAAGAGAAGCTTGACTCTAT+GGG | - | chr2_1:4421682-4421701 | None:intergenic | 40.0% | |
ACTGAGCTGAGTATTTGAAC+TGG | - | chr2_1:4421713-4421732 | None:intergenic | 40.0% | |
AAAGTTTGTAGCACCAAACG+AGG | + | chr2_1:4421744-4421763 | Msa0189110:CDS | 40.0% | |
CAAAGCCATCAGCAAAACTA+CGG | - | chr2_1:4421801-4421820 | None:intergenic | 40.0% | |
TCACATTCAAAACAGCGTTG+AGG | + | chr2_1:4421831-4421850 | Msa0189110:CDS | 40.0% | |
TCATTCACTCTTAATCTGGC+AGG | + | chr2_1:4421964-4421983 | Msa0189110:intron | 40.0% | |
CATTCACTCTTAATCTGGCA+GGG | + | chr2_1:4421965-4421984 | Msa0189110:intron | 40.0% | |
TTCAACTCATGGAAGAGGTT+AGG | + | chr2_1:4422074-4422093 | Msa0189110:CDS | 40.0% | |
TCAACTCATGGAAGAGGTTA+GGG | + | chr2_1:4422075-4422094 | Msa0189110:CDS | 40.0% | |
GGCCTTTATTATCTCCTCAT+TGG | - | chr2_1:4422370-4422389 | None:intergenic | 40.0% | |
GCATAGTAATGCCTTGTGTT+TGG | - | chr2_1:4422391-4422410 | None:intergenic | 40.0% | |
! | ATGTGTTGTAGCCTTGGTTA+AGG | + | chr2_1:4422455-4422474 | Msa0189110:CDS | 40.0% |
! | TGTGTTGTAGCCTTGGTTAA+GGG | + | chr2_1:4422456-4422475 | Msa0189110:CDS | 40.0% |
AAACTGCAAACCCTTAACCA+AGG | - | chr2_1:4422469-4422488 | None:intergenic | 40.0% | |
GTTTGTCCTTGAACAGATTC+AGG | + | chr2_1:4422485-4422504 | Msa0189110:CDS | 40.0% | |
GAGGTGCAGTTTACTCATTA+AGG | - | chr2_1:4422726-4422745 | None:intergenic | 40.0% | |
!! | TGTTTGCAAAGGCATTCCTA+AGG | - | chr2_1:4422887-4422906 | None:intergenic | 40.0% |
TCACATGTTCTTCCCATTCT+TGG | - | chr2_1:4422989-4423008 | None:intergenic | 40.0% | |
TGAATTATCAGCCAATGCTG+AGG | - | chr2_1:4423018-4423037 | None:intergenic | 40.0% | |
TTGGCTGATAATTCATCCCA+AGG | + | chr2_1:4423023-4423042 | Msa0189110:CDS | 40.0% | |
TGGCTGATAATTCATCCCAA+GGG | + | chr2_1:4423024-4423043 | Msa0189110:CDS | 40.0% | |
CTTCAACTACTCTCAGAACT+GGG | + | chr2_1:4423051-4423070 | Msa0189110:CDS | 40.0% | |
TTCAACTACTCTCAGAACTG+GGG | + | chr2_1:4423052-4423071 | Msa0189110:CDS | 40.0% | |
! | ATTGGTTCTCCTTTGCATTC+TGG | - | chr2_1:4423255-4423274 | None:intergenic | 40.0% |
AGCCTCACAACAAGATCAAT+TGG | - | chr2_1:4423273-4423292 | None:intergenic | 40.0% | |
! | ATTGATCTTGTTGTGAGGCT+TGG | + | chr2_1:4423273-4423292 | Msa0189110:CDS | 40.0% |
!! | GGTTTGCTGAAGTTAGTAAG+TGG | + | chr2_1:4423294-4423313 | Msa0189110:CDS | 40.0% |
TAAGCTCTTCCCTAACATTC+TGG | - | chr2_1:4423741-4423760 | None:intergenic | 40.0% | |
TGGGAGGAAATTAGCTGAAA+TGG | + | chr2_1:4423847-4423866 | Msa0189110:CDS | 40.0% | |
GAAATGGCACTACTGAAAGT+TGG | + | chr2_1:4423863-4423882 | Msa0189110:CDS | 40.0% | |
AATGGCACTACTGAAAGTTG+GGG | + | chr2_1:4423865-4423884 | Msa0189110:CDS | 40.0% | |
GTGAACACCAACTGATATAG+TGG | - | chr2_1:4423945-4423964 | None:intergenic | 40.0% | |
! | CTATATCAGTTGGTGTTCAC+GGG | + | chr2_1:4423945-4423964 | Msa0189110:CDS | 40.0% |
AACGGTAGCAGATTCCGTAA+CGG | - | chr2_1:4417913-4417932 | None:intergenic | 45.0% | |
TACGGAATCTGCTACCGTTA+CGG | + | chr2_1:4417914-4417933 | Msa0189110:five_prime_UTR | 45.0% | |
TCGTTGAATTGTTATGGCGG+CGG | + | chr2_1:4417957-4417976 | Msa0189110:exon | 45.0% | |
TGATGAATCTCTGTCATCGC+CGG | + | chr2_1:4418035-4418054 | Msa0189110:CDS | 45.0% | |
AGTCGTTTCGGTAATCTCAC+CGG | - | chr2_1:4418057-4418076 | None:intergenic | 45.0% | |
TCGATTTCTTCCACCGAACT+CGG | - | chr2_1:4418114-4418133 | None:intergenic | 45.0% | |
GAACATCGTGAAGGACTTCT+TGG | - | chr2_1:4418578-4418597 | None:intergenic | 45.0% | |
TCCTTCACGATGTTCATCTC+AGG | + | chr2_1:4418583-4418602 | Msa0189110:CDS | 45.0% | |
TCCTGAGATGAACATCGTGA+AGG | - | chr2_1:4418587-4418606 | None:intergenic | 45.0% | |
ACGATGTTCATCTCAGGATG+AGG | + | chr2_1:4418589-4418608 | Msa0189110:CDS | 45.0% | |
TCATCTCAGGATGAGGATCT+TGG | + | chr2_1:4418596-4418615 | Msa0189110:CDS | 45.0% | |
! | TGGTATCGGATAGTTGGTCT+CGG | + | chr2_1:4418765-4418784 | Msa0189110:intron | 45.0% |
TCTCGGATAGTGACATGTGT+AGG | + | chr2_1:4418782-4418801 | Msa0189110:intron | 45.0% | |
ACATGTGTAGGACATGGACA+TGG | + | chr2_1:4418794-4418813 | Msa0189110:intron | 45.0% | |
CATGTGTAGGACATGGACAT+GGG | + | chr2_1:4418795-4418814 | Msa0189110:intron | 45.0% | |
!! | CACTTTCCATCAGAAGTGTC+CGG | + | chr2_1:4418821-4418840 | Msa0189110:intron | 45.0% |
!! | TAGGTTGAGCCTTTTGACGA+AGG | + | chr2_1:4419475-4419494 | Msa0189110:intron | 45.0% |
!! | TTTTAGCTGCTTGACGCAGT+TGG | - | chr2_1:4419526-4419545 | None:intergenic | 45.0% |
CTGCGTCAAGCAGCTAAAAA+TGG | + | chr2_1:4419527-4419546 | Msa0189110:CDS | 45.0% | |
!! | GAAGGGCATCTCTTAGAGAA+AGG | + | chr2_1:4419660-4419679 | Msa0189110:CDS | 45.0% |
GGTCATCTCAGTCATTGATG+AGG | + | chr2_1:4419681-4419700 | Msa0189110:CDS | 45.0% | |
ATGTTACATGGCGGTCTTAG+TGG | + | chr2_1:4419980-4419999 | Msa0189110:intron | 45.0% | |
GCTGAATATATCAGGCAGAG+AGG | + | chr2_1:4420058-4420077 | Msa0189110:CDS | 45.0% | |
GTGGTTATGCGTTCGAGAAT+TGG | + | chr2_1:4420089-4420108 | Msa0189110:CDS | 45.0% | |
CTGTGAAAACTTTGCTGGAC+CGG | + | chr2_1:4420518-4420537 | Msa0189110:CDS | 45.0% | |
CAACAGCTGTAAACACTCTG+AGG | - | chr2_1:4420555-4420574 | None:intergenic | 45.0% | |
GGGCTTCTTGTAGAACTTCT+AGG | - | chr2_1:4420658-4420677 | None:intergenic | 45.0% | |
GGTTAAGGATGCTCGATCTT+TGG | + | chr2_1:4421011-4421030 | Msa0189110:CDS | 45.0% | |
TAAGGATGCTCGATCTTTGG+AGG | + | chr2_1:4421014-4421033 | Msa0189110:CDS | 45.0% | |
TATTGCAAGAGCGAACGCTT+TGG | + | chr2_1:4421364-4421383 | Msa0189110:intron | 45.0% | |
!! | CTTGGAGTTTGGCTTGTCAT+TGG | - | chr2_1:4421550-4421569 | None:intergenic | 45.0% |
TAAAAAGGGAGCGAACCACT+CGG | - | chr2_1:4421642-4421661 | None:intergenic | 45.0% | |
! | AGTGGTTCGCTCCCTTTTTA+AGG | + | chr2_1:4421642-4421661 | Msa0189110:CDS | 45.0% |
AGAGAAGCTTGACTCTATGG+GGG | - | chr2_1:4421680-4421699 | None:intergenic | 45.0% | |
CGAAGAGAAGCTTGACTCTA+TGG | - | chr2_1:4421683-4421702 | None:intergenic | 45.0% | |
CAAAACTACGGTGATGCTCA+TGG | - | chr2_1:4421789-4421808 | None:intergenic | 45.0% | |
!! | CATCACCGTAGTTTTGCTGA+TGG | + | chr2_1:4421793-4421812 | Msa0189110:CDS | 45.0% |
! | CAAAACAGCGTTGAGGTAAG+AGG | + | chr2_1:4421838-4421857 | Msa0189110:intron | 45.0% |
! | AGACAATGGAGAAGGCCTTT+TGG | + | chr2_1:4421999-4422018 | Msa0189110:CDS | 45.0% |
! | GACAATGGAGAAGGCCTTTT+GGG | + | chr2_1:4422000-4422019 | Msa0189110:CDS | 45.0% |
!!! | GGCCTTTTGGGATAGTGTTA+TGG | + | chr2_1:4422012-4422031 | Msa0189110:CDS | 45.0% |
GGTGCTTAAATCAGGTCAAC+TGG | + | chr2_1:4422278-4422297 | Msa0189110:intron | 45.0% | |
! | CAACTGGATGTCGATTACCT+TGG | + | chr2_1:4422294-4422313 | Msa0189110:CDS | 45.0% |
CAATGCATGTGTTGTAGCCT+TGG | + | chr2_1:4422449-4422468 | Msa0189110:CDS | 45.0% | |
GACACACCTGAATCTGTTCA+AGG | - | chr2_1:4422494-4422513 | None:intergenic | 45.0% | |
!! | AGAGAGGTACTAGCATCAGA+TGG | - | chr2_1:4422921-4422940 | None:intergenic | 45.0% |
TCTAAGGGTCAAAGGAAGAG+AGG | - | chr2_1:4422937-4422956 | None:intergenic | 45.0% | |
CTCTTCCTTTGACCCTTAGA+TGG | + | chr2_1:4422937-4422956 | Msa0189110:intron | 45.0% | |
GAAAGCCATCTAAGGGTCAA+AGG | - | chr2_1:4422945-4422964 | None:intergenic | 45.0% | |
TGTGAATTCCTCCTCAGCAT+TGG | + | chr2_1:4423004-4423023 | Msa0189110:CDS | 45.0% | |
ATTATCAGCCAATGCTGAGG+AGG | - | chr2_1:4423015-4423034 | None:intergenic | 45.0% | |
AGTAGTTGAAGGAAGCCCTT+GGG | - | chr2_1:4423042-4423061 | None:intergenic | 45.0% | |
!! | CCAGTTCTGAGAGTAGTTGA+AGG | - | chr2_1:4423053-4423072 | None:intergenic | 45.0% |
CCTTCAACTACTCTCAGAAC+TGG | + | chr2_1:4423050-4423069 | Msa0189110:CDS | 45.0% | |
TCAACTACTCTCAGAACTGG+GGG | + | chr2_1:4423053-4423072 | Msa0189110:CDS | 45.0% | |
!! | CAAAAGTACTGGCAGTCCAA+TGG | + | chr2_1:4423088-4423107 | Msa0189110:CDS | 45.0% |
CCATCAGGAGAAAAGACCAT+TGG | - | chr2_1:4423107-4423126 | None:intergenic | 45.0% | |
! | CCAATGGTCTTTTCTCCTGA+TGG | + | chr2_1:4423104-4423123 | Msa0189110:CDS | 45.0% |
GATCAGCAACCAGAATGCAA+AGG | + | chr2_1:4423243-4423262 | Msa0189110:CDS | 45.0% | |
! | GTTTTTCTCTCTTCTGGCGA+TGG | + | chr2_1:4423471-4423490 | Msa0189110:intron | 45.0% |
AGTAGCAAGCTCTGCAGATA+TGG | + | chr2_1:4423562-4423581 | Msa0189110:CDS | 45.0% | |
CAAGAGTTGTTCTGCACACT+TGG | - | chr2_1:4423600-4423619 | None:intergenic | 45.0% | |
CAAGTGTGCAGAACAACTCT+TGG | + | chr2_1:4423598-4423617 | Msa0189110:CDS | 45.0% | |
TGCAATCTGCCATCAGTTGA+CGG | + | chr2_1:4423674-4423693 | Msa0189110:CDS | 45.0% | |
CAGTTGCTGCCAGAATGTTA+GGG | + | chr2_1:4423729-4423748 | Msa0189110:CDS | 45.0% | |
TTAGGGAAGAGCTTACAAGC+TGG | + | chr2_1:4423746-4423765 | Msa0189110:CDS | 45.0% | |
TAGGGAAGAGCTTACAAGCT+GGG | + | chr2_1:4423747-4423766 | Msa0189110:CDS | 45.0% | |
TTCAGCTAATTTCCTCCCAC+TGG | - | chr2_1:4423846-4423865 | None:intergenic | 45.0% | |
! | TGCTCTGACTGAAAGTGTAG+TGG | + | chr2_1:4423892-4423911 | Msa0189110:CDS | 45.0% |
!!! | AGCTGCTCGTGTTTTGATTG+TGG | + | chr2_1:4423916-4423935 | Msa0189110:CDS | 45.0% |
!! | AAATATTACAAATAATATTA+AGG | - | chr2_1:4420262-4420281 | None:intergenic | 5.0% |
ACAAAGCTCTCTCTCGAAGC+TGG | + | chr2_1:4417683-4417702 | Msa0189110:five_prime_UTR | 50.0% | |
! | ATTCCGTAACGGAGCAACGA+CGG | - | chr2_1:4417902-4417921 | None:intergenic | 50.0% |
CGTTGAATTGTTATGGCGGC+GGG | + | chr2_1:4417958-4417977 | Msa0189110:exon | 50.0% | |
CCGTATCTAGAAGCCTTCGT+CGG | - | chr2_1:4418080-4418099 | None:intergenic | 50.0% | |
CCGACGAAGGCTTCTAGATA+CGG | + | chr2_1:4418077-4418096 | Msa0189110:CDS | 50.0% | |
GGAGTGTAAGTCACCGAGTT+CGG | + | chr2_1:4418098-4418117 | Msa0189110:CDS | 50.0% | |
GGATCTTGGTCAGCGATTAG+AGG | + | chr2_1:4418610-4418629 | Msa0189110:CDS | 50.0% | |
AACCCACCTCTTCTGTTCAG+CGG | - | chr2_1:4418648-4418667 | None:intergenic | 50.0% | |
! | AAGAGGTGGGTTCCATGCTT+TGG | + | chr2_1:4418656-4418675 | Msa0189110:intron | 50.0% |
CAAATGAGCGCGTGAAGCTT+GGG | + | chr2_1:4419567-4419586 | Msa0189110:CDS | 50.0% | |
CGTGAAGCTTGGGACAAAAG+TGG | + | chr2_1:4419577-4419596 | Msa0189110:CDS | 50.0% | |
AGTGGAATCACGTGTTCAGC+AGG | + | chr2_1:4419595-4419614 | Msa0189110:CDS | 50.0% | |
TGCTTATCCTAAAGGCTCGC+AGG | + | chr2_1:4419633-4419652 | Msa0189110:CDS | 50.0% | |
TTCTTTGCCTGCGAGCCTTT+AGG | - | chr2_1:4419643-4419662 | None:intergenic | 50.0% | |
TAAAGGCTCGCAGGCAAAGA+AGG | + | chr2_1:4419642-4419661 | Msa0189110:CDS | 50.0% | |
AAAGGCTCGCAGGCAAAGAA+GGG | + | chr2_1:4419643-4419662 | Msa0189110:CDS | 50.0% | |
! | ATTCAGCGGCAGCTCGTTTT+TGG | - | chr2_1:4419757-4419776 | None:intergenic | 50.0% |
TGCTGGAAGCTGAGAAGAAG+AGG | + | chr2_1:4419792-4419811 | Msa0189110:CDS | 50.0% | |
GCTGGAAGCTGAGAAGAAGA+GGG | + | chr2_1:4419793-4419812 | Msa0189110:CDS | 50.0% | |
ACCAGCGTGAGATTGAGAGA+AGG | + | chr2_1:4419864-4419883 | Msa0189110:CDS | 50.0% | |
TCCTTCTCTCAATCTCACGC+TGG | - | chr2_1:4419868-4419887 | None:intergenic | 50.0% | |
!! | CTTCTTTAAGGTGCTGGAGG+CGG | + | chr2_1:4420362-4420381 | Msa0189110:intron | 50.0% |
TTTCTCGTTGATCCCCAGCA+CGG | - | chr2_1:4420434-4420453 | None:intergenic | 50.0% | |
! | CAGCTGTAAACACTCTGAGG+CGG | - | chr2_1:4420552-4420571 | None:intergenic | 50.0% |
! | TAGGAGTAGCCCTTTTCCTG+GGG | - | chr2_1:4420639-4420658 | None:intergenic | 50.0% |
! | CTAGGAGTAGCCCTTTTCCT+GGG | - | chr2_1:4420640-4420659 | None:intergenic | 50.0% |
! | TCTAGGAGTAGCCCTTTTCC+TGG | - | chr2_1:4420641-4420660 | None:intergenic | 50.0% |
AGCAGCAAGCTGTGATCTGA+AGG | - | chr2_1:4420944-4420963 | None:intergenic | 50.0% | |
GAATCATCGAAGCCTCAAGC+TGG | - | chr2_1:4421062-4421081 | None:intergenic | 50.0% | |
GAAAAGGTGATGCACCTGAG+TGG | + | chr2_1:4421445-4421464 | Msa0189110:CDS | 50.0% | |
GAGCAATAAGACAAGCCGAG+TGG | + | chr2_1:4421624-4421643 | Msa0189110:CDS | 50.0% | |
GTGAGATGGCTCCAATAAGC+TGG | + | chr2_1:4422107-4422126 | Msa0189110:CDS | 50.0% | |
GATGGCTCCAATAAGCTGGA+AGG | + | chr2_1:4422111-4422130 | Msa0189110:CDS | 50.0% | |
GCTTTCTTCTCCAGCCAATG+AGG | + | chr2_1:4422353-4422372 | Msa0189110:CDS | 50.0% | |
GAGTAGTTGAAGGAAGCCCT+TGG | - | chr2_1:4423043-4423062 | None:intergenic | 50.0% | |
! | CATTCTGGTTGCTGATCACC+TGG | - | chr2_1:4423240-4423259 | None:intergenic | 50.0% |
CTCTTAACTTCGCCAGACTG+AGG | + | chr2_1:4423358-4423377 | Msa0189110:CDS | 50.0% | |
GCATCTTCACCGTCAACTGA+TGG | - | chr2_1:4423686-4423705 | None:intergenic | 50.0% | |
TCAGTTGACGGTGAAGATGC+AGG | + | chr2_1:4423686-4423705 | Msa0189110:CDS | 50.0% | |
CAGTTGACGGTGAAGATGCA+GGG | + | chr2_1:4423687-4423706 | Msa0189110:CDS | 50.0% | |
AGGGAAGGTTCAGTCACGAA+AGG | + | chr2_1:4423706-4423725 | Msa0189110:CDS | 50.0% | |
GCAGTTGCTGCCAGAATGTT+AGG | + | chr2_1:4423728-4423747 | Msa0189110:CDS | 50.0% | |
AGGGAAGAGCTTACAAGCTG+GGG | + | chr2_1:4423748-4423767 | Msa0189110:CDS | 50.0% | |
TGGGGATGCTGTGTTTGAGA+GGG | + | chr2_1:4423766-4423785 | Msa0189110:CDS | 50.0% | |
GCTGTCTATTCAGCTTTGCG+TGG | + | chr2_1:4423797-4423816 | Msa0189110:CDS | 50.0% | |
CTTTGCGTGGAGTTGTGCTT+GGG | + | chr2_1:4423810-4423829 | Msa0189110:CDS | 50.0% | |
TTTGCGTGGAGTTGTGCTTG+GGG | + | chr2_1:4423811-4423830 | Msa0189110:CDS | 50.0% | |
GTGGCAGCCACTATATCAGT+TGG | + | chr2_1:4423935-4423954 | Msa0189110:CDS | 50.0% | |
AATTGTTATGGCGGCGGGAG+TGG | + | chr2_1:4417963-4417982 | Msa0189110:exon | 55.0% | |
TACCGAAACGACTCCGACGA+AGG | + | chr2_1:4418064-4418083 | Msa0189110:CDS | 55.0% | |
AGCCTTCGTCGGAGTCGTTT+CGG | - | chr2_1:4418069-4418088 | None:intergenic | 55.0% | |
GTGTAAGTCACCGAGTTCGG+TGG | + | chr2_1:4418101-4418120 | Msa0189110:CDS | 55.0% | |
TGCAAGCCGCTGAACAGAAG+AGG | + | chr2_1:4418639-4418658 | Msa0189110:CDS | 55.0% | |
AAGCCGCTGAACAGAAGAGG+TGG | + | chr2_1:4418642-4418661 | Msa0189110:intron | 55.0% | |
AGCCGCTGAACAGAAGAGGT+GGG | + | chr2_1:4418643-4418662 | Msa0189110:intron | 55.0% | |
!! | ATCAGAAGTGTCCGGTGCTC+CGG | + | chr2_1:4418829-4418848 | Msa0189110:intron | 55.0% |
TAGATGCAGAACCGGAGCAC+CGG | - | chr2_1:4418843-4418862 | None:intergenic | 55.0% | |
GCATCTGGGCCTTCGTCAAA+AGG | - | chr2_1:4419487-4419506 | None:intergenic | 55.0% | |
CTGCCTAGCTAAGCGCATCT+GGG | - | chr2_1:4419501-4419520 | None:intergenic | 55.0% | |
GCTTCACGCGCTCATTTGCA+TGG | - | chr2_1:4419565-4419584 | None:intergenic | 55.0% | |
GCAAATGAGCGCGTGAAGCT+TGG | + | chr2_1:4419566-4419585 | Msa0189110:CDS | 55.0% | |
ATCACGTGTTCAGCAGGCTG+AGG | + | chr2_1:4419601-4419620 | Msa0189110:CDS | 55.0% | |
GGTGCACGCTAAAGTCTTGC+AGG | + | chr2_1:4419814-4419833 | Msa0189110:CDS | 55.0% | |
AGTCTTGCAGGCGAGACATG+TGG | + | chr2_1:4419826-4419845 | Msa0189110:CDS | 55.0% | |
CACGGCATATGCCTTCGTCA+AGG | - | chr2_1:4420416-4420435 | None:intergenic | 55.0% | |
! | ACGAAGGCATATGCCGTGCT+GGG | + | chr2_1:4420418-4420437 | Msa0189110:CDS | 55.0% |
GGGAGGCAACCCGTTTAAGA+AGG | - | chr2_1:4420618-4420637 | None:intergenic | 55.0% | |
! | AGGAGTAGCCCTTTTCCTGG+GGG | - | chr2_1:4420638-4420657 | None:intergenic | 55.0% |
GGGCGAGCGTGAAATTGCTT+TGG | + | chr2_1:4420804-4420823 | Msa0189110:CDS | 55.0% | |
TAGAGCAGCTTGCCAGCTTG+AGG | + | chr2_1:4421047-4421066 | Msa0189110:CDS | 55.0% | |
ATGCACCTGAGTGGAGATGC+TGG | + | chr2_1:4421454-4421473 | Msa0189110:CDS | 55.0% | |
TGCACCTGAGTGGAGATGCT+GGG | + | chr2_1:4421455-4421474 | Msa0189110:CDS | 55.0% | |
CAATCCCAGCATCTCCACTC+AGG | - | chr2_1:4421462-4421481 | None:intergenic | 55.0% | |
AGATGCTGGGATTGAGCGCA+TGG | + | chr2_1:4421468-4421487 | Msa0189110:CDS | 55.0% | |
GTGGAGTTGGGCTTGGAGTT+TGG | - | chr2_1:4421561-4421580 | None:intergenic | 55.0% | |
AGGTAAGAGGATTCTGCCCG+AGG | + | chr2_1:4421851-4421870 | Msa0189110:intron | 55.0% | |
CCAGCAGGTCCCTTAAGCAA+AGG | - | chr2_1:4422855-4422874 | None:intergenic | 55.0% | |
CCTTTGCTTAAGGGACCTGC+TGG | + | chr2_1:4422852-4422871 | Msa0189110:CDS | 55.0% | |
CTAAGGTAGTCCAGACCAGC+AGG | - | chr2_1:4422870-4422889 | None:intergenic | 55.0% | |
! | CTGCTGGTCTGGACTACCTT+AGG | + | chr2_1:4422868-4422887 | Msa0189110:CDS | 55.0% |
TGACGGTGAAGATGCAGGGA+AGG | + | chr2_1:4423691-4423710 | Msa0189110:CDS | 55.0% | |
CTGGGGATGCTGTGTTTGAG+AGG | + | chr2_1:4423765-4423784 | Msa0189110:CDS | 55.0% | |
GCTTTGCGTGGAGTTGTGCT+TGG | + | chr2_1:4423809-4423828 | Msa0189110:CDS | 55.0% | |
TTGCGTGGAGTTGTGCTTGG+GGG | + | chr2_1:4423812-4423831 | Msa0189110:CDS | 55.0% | |
GAGTTGTGCTTGGGGGAAGT+GGG | + | chr2_1:4423819-4423838 | Msa0189110:CDS | 55.0% | |
AGTTGTGCTTGGGGGAAGTG+GGG | + | chr2_1:4423820-4423839 | Msa0189110:CDS | 55.0% | |
GCACTACTGAAAGTTGGGGC+TGG | + | chr2_1:4423869-4423888 | Msa0189110:CDS | 55.0% | |
TCGCCGTCGTTGCTCCGTTA+CGG | + | chr2_1:4417896-4417915 | Msa0189110:five_prime_UTR | 60.0% | |
GCGGGAGTGGAATTACCGGA+GGG | + | chr2_1:4417976-4417995 | Msa0189110:CDS | 60.0% | |
!! | GGAGCACCGGACACTTCTGA+TGG | - | chr2_1:4418830-4418849 | None:intergenic | 60.0% |
AGGCCCAGATGCGCTTAGCT+AGG | + | chr2_1:4419495-4419514 | Msa0189110:CDS | 60.0% | |
CCTGCCTAGCTAAGCGCATC+TGG | - | chr2_1:4419502-4419521 | None:intergenic | 60.0% | |
CCAGATGCGCTTAGCTAGGC+AGG | + | chr2_1:4419499-4419518 | Msa0189110:CDS | 60.0% | |
AGGCAGAGAGGAAGACTGCG+TGG | + | chr2_1:4420070-4420089 | Msa0189110:CDS | 60.0% | |
! | GACGAAGGCATATGCCGTGC+TGG | + | chr2_1:4420417-4420436 | Msa0189110:CDS | 60.0% |
! | CGAAGGCATATGCCGTGCTG+GGG | + | chr2_1:4420419-4420438 | Msa0189110:CDS | 60.0% |
!! | CTCTGAGGCGGCTCTCAAAC+CGG | - | chr2_1:4420540-4420559 | None:intergenic | 60.0% |
!! | TTAAACGGGTTGCCTCCCCC+AGG | + | chr2_1:4420620-4420639 | Msa0189110:CDS | 60.0% |
GGTTGCCTCCCCCAGGAAAA+GGG | + | chr2_1:4420627-4420646 | Msa0189110:CDS | 60.0% | |
! | AGTAGCCCTTTTCCTGGGGG+AGG | - | chr2_1:4420635-4420654 | None:intergenic | 60.0% |
GCTTAAGGGACCTGCTGGTC+TGG | + | chr2_1:4422857-4422876 | Msa0189110:CDS | 60.0% | |
AGCCTGGAGAGACCTCAGTC+TGG | - | chr2_1:4423373-4423392 | None:intergenic | 60.0% | |
GGAGTTGTGCTTGGGGGAAG+TGG | + | chr2_1:4423818-4423837 | Msa0189110:CDS | 60.0% | |
! | CAGTTGGTGTTCACGGGCCA+TGG | + | chr2_1:4423951-4423970 | Msa0189110:CDS | 60.0% |
GGCGGCGGGAGTGGAATTAC+CGG | + | chr2_1:4417972-4417991 | Msa0189110:CDS | 65.0% | |
GGCGGGAGTGGAATTACCGG+AGG | + | chr2_1:4417975-4417994 | Msa0189110:CDS | 65.0% | |
GGGTTGCCTCCCCCAGGAAA+AGG | + | chr2_1:4420626-4420645 | Msa0189110:CDS | 65.0% | |
CGCCAGACTGAGGTCTCTCC+AGG | + | chr2_1:4423368-4423387 | Msa0189110:CDS | 65.0% | |
TTGGGGGAAGTGGGGCCAGT+GGG | + | chr2_1:4423828-4423847 | Msa0189110:CDS | 65.0% | |
! | GGTGCTGGAGGCGGTTCTCG+AGG | + | chr2_1:4420371-4420390 | Msa0189110:intron | 70.0% |
CTTGGGGGAAGTGGGGCCAG+TGG | + | chr2_1:4423827-4423846 | Msa0189110:CDS | 70.0% | |
GGGGAAGTGGGGCCAGTGGG+AGG | + | chr2_1:4423831-4423850 | Msa0189110:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 4417586 | 4424238 | 4417586 | ID=Msa0189110;Name=Msa0189110 |
chr2_1 | mRNA | 4417586 | 4424238 | 4417586 | ID=Msa0189110-mRNA-1;Parent=Msa0189110;Name=Msa0189110-mRNA-1;_AED=0.07;_eAED=0.07;_QI=384|0.90|0.83|1|1|1|12|238|1150 |
chr2_1 | exon | 4417586 | 4418167 | 4417586 | ID=Msa0189110-mRNA-1:exon:1977;Parent=Msa0189110-mRNA-1 |
chr2_1 | exon | 4418536 | 4418660 | 4418536 | ID=Msa0189110-mRNA-1:exon:1978;Parent=Msa0189110-mRNA-1 |
chr2_1 | exon | 4419478 | 4419922 | 4419478 | ID=Msa0189110-mRNA-1:exon:1979;Parent=Msa0189110-mRNA-1 |
chr2_1 | exon | 4420043 | 4420158 | 4420043 | ID=Msa0189110-mRNA-1:exon:1980;Parent=Msa0189110-mRNA-1 |
chr2_1 | exon | 4420372 | 4421146 | 4420372 | ID=Msa0189110-mRNA-1:exon:1981;Parent=Msa0189110-mRNA-1 |
chr2_1 | exon | 4421418 | 4421852 | 4421418 | ID=Msa0189110-mRNA-1:exon:1982;Parent=Msa0189110-mRNA-1 |
chr2_1 | exon | 4421986 | 4422174 | 4421986 | ID=Msa0189110-mRNA-1:exon:1983;Parent=Msa0189110-mRNA-1 |
chr2_1 | exon | 4422279 | 4422506 | 4422279 | ID=Msa0189110-mRNA-1:exon:1984;Parent=Msa0189110-mRNA-1 |
chr2_1 | exon | 4422807 | 4422930 | 4422807 | ID=Msa0189110-mRNA-1:exon:1985;Parent=Msa0189110-mRNA-1 |
chr2_1 | exon | 4422985 | 4423140 | 4422985 | ID=Msa0189110-mRNA-1:exon:1986;Parent=Msa0189110-mRNA-1 |
chr2_1 | exon | 4423241 | 4423424 | 4423241 | ID=Msa0189110-mRNA-1:exon:1987;Parent=Msa0189110-mRNA-1 |
chr2_1 | exon | 4423523 | 4424238 | 4423523 | ID=Msa0189110-mRNA-1:exon:1988;Parent=Msa0189110-mRNA-1 |
chr2_1 | five_prime_UTR | 4417586 | 4417969 | 4417586 | ID=Msa0189110-mRNA-1:five_prime_utr;Parent=Msa0189110-mRNA-1 |
chr2_1 | CDS | 4417970 | 4418167 | 4417970 | ID=Msa0189110-mRNA-1:cds;Parent=Msa0189110-mRNA-1 |
chr2_1 | CDS | 4418536 | 4418660 | 4418536 | ID=Msa0189110-mRNA-1:cds;Parent=Msa0189110-mRNA-1 |
chr2_1 | CDS | 4419478 | 4419922 | 4419478 | ID=Msa0189110-mRNA-1:cds;Parent=Msa0189110-mRNA-1 |
chr2_1 | CDS | 4420043 | 4420158 | 4420043 | ID=Msa0189110-mRNA-1:cds;Parent=Msa0189110-mRNA-1 |
chr2_1 | CDS | 4420372 | 4421146 | 4420372 | ID=Msa0189110-mRNA-1:cds;Parent=Msa0189110-mRNA-1 |
chr2_1 | CDS | 4421418 | 4421852 | 4421418 | ID=Msa0189110-mRNA-1:cds;Parent=Msa0189110-mRNA-1 |
chr2_1 | CDS | 4421986 | 4422174 | 4421986 | ID=Msa0189110-mRNA-1:cds;Parent=Msa0189110-mRNA-1 |
chr2_1 | CDS | 4422279 | 4422506 | 4422279 | ID=Msa0189110-mRNA-1:cds;Parent=Msa0189110-mRNA-1 |
chr2_1 | CDS | 4422807 | 4422930 | 4422807 | ID=Msa0189110-mRNA-1:cds;Parent=Msa0189110-mRNA-1 |
chr2_1 | CDS | 4422985 | 4423140 | 4422985 | ID=Msa0189110-mRNA-1:cds;Parent=Msa0189110-mRNA-1 |
chr2_1 | CDS | 4423241 | 4423424 | 4423241 | ID=Msa0189110-mRNA-1:cds;Parent=Msa0189110-mRNA-1 |
chr2_1 | CDS | 4423523 | 4424000 | 4423523 | ID=Msa0189110-mRNA-1:cds;Parent=Msa0189110-mRNA-1 |
chr2_1 | three_prime_UTR | 4424001 | 4424238 | 4424001 | ID=Msa0189110-mRNA-1:three_prime_utr;Parent=Msa0189110-mRNA-1 |
Gene Sequence |
Protein sequence |