AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1437330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1437330 MtrunA17_Chr2g0293831 97.461 1142 23 1 1 1142 1 1136 0.0 2296
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1437330 AT5G49930.1 67.725 1134 284 12 1 1124 1 1062 0.0 1509

Find 271 sgRNAs with CRISPR-Local

Find 649 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAACCTGTTTAAGACTTTC+TGG 0.109689 tig0028267:+47745 None:intergenic
TCCACCACACCCTCTTATTA+TGG 0.149804 tig0028267:-43119 Msa1437330:CDS
TGAAACATCCTGCTTGGTTT+AGG 0.219085 tig0028267:+43594 None:intergenic
CACCCTCTTATTATGGGTTT+TGG 0.226117 tig0028267:-43112 Msa1437330:CDS
CATTAGCAGTGAGAATTATT+TGG 0.231172 tig0028267:-45073 Msa1437330:CDS
TTGTCCGAGGCTTCATTTAC+AGG 0.231565 tig0028267:+41964 None:intergenic
ATCATCCCACACTTTATCTT+TGG 0.239590 tig0028267:+47906 None:intergenic
CTGAAGAGCTGAGTTCTCTT+TGG 0.242491 tig0028267:+47461 None:intergenic
CATCTTCCTTGGAAGATGTT+AGG 0.245504 tig0028267:+48124 None:intergenic
GAAGATGATATTAATGAAAT+AGG 0.260656 tig0028267:-40986 Msa1437330:CDS
CATTGCCACTCTATCTTCTA+AGG 0.268341 tig0028267:+41012 None:intergenic
TCAAAGTTAAAAGATATTTC+TGG 0.272056 tig0028267:-42467 Msa1437330:CDS
GATGATACTGTGAATTTGTT+AGG 0.280752 tig0028267:+50071 None:intergenic
AATGATGTGGATTACTTAAC+AGG 0.288826 tig0028267:-40941 Msa1437330:CDS
TGCATCAAAATATATCCTTC+TGG 0.291577 tig0028267:+47805 None:intergenic
GGTGTGTATTTGTAGTCTTC+TGG 0.294799 tig0028267:-42015 Msa1437330:intron
TGGATGCAGGATATCATTTC+AGG 0.299988 tig0028267:-47838 Msa1437330:CDS
GAAACATCCTGCTTGGTTTA+GGG 0.302973 tig0028267:+43595 None:intergenic
AATGTCTCTTCCTTCTTGAT+TGG 0.307397 tig0028267:+41988 None:intergenic
CCACCACACCCTCTTATTAT+GGG 0.309163 tig0028267:-43118 Msa1437330:CDS
GAATCAAATTGTTCTTCAAC+AGG 0.316441 tig0028267:+42971 None:intergenic
GAATTAGTTGCTTCAATTGT+TGG 0.317333 tig0028267:-40423 Msa1437330:CDS
TATGATCCCTTGACTTAAAC+TGG 0.318032 tig0028267:+47565 None:intergenic
AGCTGATAACTGTATTAAAA+TGG 0.319210 tig0028267:-47093 Msa1437330:CDS
ATCATCTGAAGCTGTAGTTT+TGG 0.325584 tig0028267:+42811 None:intergenic
ACTGGTTTGAGAAATTTAAT+TGG 0.328444 tig0028267:-45098 Msa1437330:CDS
CTTCTGACATGTGGCTGAAT+AGG 0.329806 tig0028267:+40490 None:intergenic
GACAAAAGCAACACTCCTTC+TGG 0.330213 tig0028267:-49027 Msa1437330:CDS
TAAATAACTGGTTAGGCAAT+AGG 0.333438 tig0028267:-40109 Msa1437330:three_prime_UTR
TGATGCCACTGTTCAGGCTT+TGG 0.334940 tig0028267:-47887 Msa1437330:CDS
GGATGTGCTTCTCCATGTTT+CGG 0.338953 tig0028267:+42515 None:intergenic
AGGCAACGGCTGAAATTATA+TGG 0.339574 tig0028267:-40144 Msa1437330:three_prime_UTR
ACAATTGAAGCAACTAATTC+AGG 0.347362 tig0028267:+40426 None:intergenic
TCCCTTACTGCAGGTTTGCT+TGG 0.348886 tig0028267:+42584 None:intergenic
GAGCATCCGAATGTCATTAT+TGG 0.352420 tig0028267:-42321 Msa1437330:CDS
CTTGATCGAGCTCTGGGACT+TGG 0.355944 tig0028267:-42683 Msa1437330:CDS
CGCTTGGATGAGAGTTCATT+GGG 0.358618 tig0028267:-43079 Msa1437330:CDS
AAATGTCTCCGACGTTTAAT+CGG 0.361586 tig0028267:-49990 Msa1437330:CDS
TTGATGCAAAACAAAATGTT+GGG 0.361908 tig0028267:-47790 Msa1437330:CDS
TGCTCCTTTCTTCCTCGTCT+TGG 0.361938 tig0028267:+42339 None:intergenic
TCTTGACTAACTCCCTTGTT+TGG 0.362894 tig0028267:+40329 None:intergenic
TCATCCCACACTTTATCTTT+GGG 0.363486 tig0028267:+47907 None:intergenic
CCACTTTGAAAATTATCCTT+GGG 0.364362 tig0028267:-48005 Msa1437330:CDS
TTATCTGACTTCAGTGGAAA+TGG 0.366050 tig0028267:-42740 Msa1437330:CDS
AAGTTTGAAGCACTCATGTT+AGG 0.368327 tig0028267:+41037 None:intergenic
CTTGGGGAGGCACTCGGTTA+TGG 0.370025 tig0028267:-47988 Msa1437330:CDS
ATCTTCCTTGGAAGATGTTA+GGG 0.381409 tig0028267:+48125 None:intergenic
CACCCAACAGAGATCCATTA+GGG 0.382624 tig0028267:+40183 None:intergenic
CTTAAACTGGTTAAGTAAGA+TGG 0.384205 tig0028267:+47578 None:intergenic
TCCTTTCCATGTCCATCGCT+TGG 0.389389 tig0028267:+42494 None:intergenic
GGGAAAACTTAAGAAGATAA+AGG 0.392544 tig0028267:-42375 Msa1437330:CDS
TTTCCCTTTCTTCACAGGTC+CGG 0.392703 tig0028267:+40823 None:intergenic
AGACACCTCTCAAACTAGTT+TGG 0.393203 tig0028267:-42846 Msa1437330:CDS
GTAAATGAAGCCTCGGACAA+AGG 0.402536 tig0028267:-41961 Msa1437330:CDS
GGTTTCGTTTATAGATCAAT+TGG 0.403541 tig0028267:+40061 None:intergenic
CTTGAGGATGTGCGACAACT+TGG 0.405046 tig0028267:-48964 Msa1437330:CDS
CAGATTGTTCTATTTCAATT+CGG 0.405301 tig0028267:-48839 Msa1437330:CDS
GACCCTTTGTGGGATTTACT+TGG 0.406212 tig0028267:-40308 Msa1437330:three_prime_UTR
GTTAGTAAAACTGCTCCTAC+TGG 0.408852 tig0028267:-43193 Msa1437330:CDS
AAATAACATCGATAAATAAC+TGG 0.412916 tig0028267:-40121 Msa1437330:three_prime_UTR
GGAAATTCTTGATCGAGCTC+TGG 0.416560 tig0028267:-42690 Msa1437330:CDS
TTTAGGGTCAGCGGTGGAAC+TGG 0.417111 tig0028267:+43611 None:intergenic
TCGCTTGGATGAGAGTTCAT+TGG 0.417173 tig0028267:-43080 Msa1437330:CDS
GGAAACATATTCGAACTAGA+AGG 0.417794 tig0028267:-48987 Msa1437330:CDS
GCTGTTAAGGCCAATGGAAA+TGG 0.417813 tig0028267:-48090 Msa1437330:CDS
ATTAACAGGGATGATGATAA+GGG 0.418718 tig0028267:-48231 Msa1437330:intron
GTGGGATGATGCCACTGTTC+AGG 0.419541 tig0028267:-47893 Msa1437330:CDS
CATTAACAGGGATGATGATA+AGG 0.419810 tig0028267:-48232 Msa1437330:intron
TGACAATGATGAGGCTGTTA+AGG 0.419979 tig0028267:-48103 Msa1437330:CDS
GCCACTTTGAAAATTATCCT+TGG 0.421407 tig0028267:-48006 Msa1437330:CDS
GACTCGCCTACAGCTTAATC+AGG 0.422360 tig0028267:-45983 Msa1437330:intron
CTCATCATTGTCATCTTCCT+TGG 0.423507 tig0028267:+48113 None:intergenic
TCATTTATCTCGGGATTGTA+AGG 0.425596 tig0028267:-41113 Msa1437330:CDS
TTCTATTTCAATTCGGACTT+GGG 0.425819 tig0028267:-48832 Msa1437330:CDS
TTCCCTTTCTTCACAGGTCC+GGG 0.431258 tig0028267:+40824 None:intergenic
TAAGATTGAACTGCATTGTA+TGG 0.431663 tig0028267:+40869 None:intergenic
TTTGATGCAAAACAAAATGT+TGG 0.432889 tig0028267:-47791 Msa1437330:CDS
TGCATTGTATGGACCACATA+CGG 0.434326 tig0028267:+40880 None:intergenic
CTTCGAACTTTGCAACAGCT+TGG 0.438691 tig0028267:+47863 None:intergenic
TCACCCAACAGAGATCCATT+AGG 0.440729 tig0028267:+40182 None:intergenic
GTTCTATTTCAATTCGGACT+TGG 0.440813 tig0028267:-48833 Msa1437330:CDS
TCAACCAGAAAGTCTTAAAC+AGG 0.443787 tig0028267:-47749 Msa1437330:intron
AAATATGTTACAAGTGTAAG+AGG 0.444029 tig0028267:-41141 Msa1437330:CDS
GAGTTAGTCAAGACCCTTTG+TGG 0.444059 tig0028267:-40319 Msa1437330:exon
TGACTATGCAACAGATCATT+TGG 0.448313 tig0028267:+41085 None:intergenic
GATGGAGGAGAGGAGGAAAC+TGG 0.449027 tig0028267:-42995 Msa1437330:CDS
TTGTCAATTAGACCAGCTAC+TGG 0.449723 tig0028267:+46942 None:intergenic
TTAAATGAAAGGAGGGTAAG+AGG 0.451366 tig0028267:-43049 Msa1437330:CDS
CGCATATGCGCAAAGTTCAC+TGG 0.453519 tig0028267:-45116 Msa1437330:CDS
ACCCCTAATGGATCTCTGTT+GGG 0.453602 tig0028267:-40185 Msa1437330:three_prime_UTR
AGTAGTGGAATGACTGAATC+TGG 0.456045 tig0028267:-49817 Msa1437330:CDS
CTGTTGCAAAGTTCGAAGAT+TGG 0.464371 tig0028267:-47858 Msa1437330:CDS
TACCCCTAATGGATCTCTGT+TGG 0.466087 tig0028267:-40186 Msa1437330:three_prime_UTR
GAGCAACAATCTCGACGAAA+TGG 0.466394 tig0028267:-46883 Msa1437330:CDS
GGTGAGTACTACTGTTAGAT+AGG 0.470613 tig0028267:-40164 Msa1437330:three_prime_UTR
AAAATCGAGTGCACACTTTG+AGG 0.472070 tig0028267:-47121 Msa1437330:CDS
ACATCGATAAATAACTGGTT+AGG 0.472181 tig0028267:-40116 Msa1437330:three_prime_UTR
AAAATCAGCCGTGGACAAAA+GGG 0.472781 tig0028267:-42395 Msa1437330:CDS
TTAAACTGGTTAAGTAAGAT+GGG 0.475262 tig0028267:+47579 None:intergenic
CGAAGTTGATTTAGCTCTCT+CGG 0.477410 tig0028267:-46112 Msa1437330:CDS
TTATATGCTGTTCCCGTATG+TGG 0.477989 tig0028267:-40893 Msa1437330:CDS
ATCTCTACAGTGTTGAAACT+TGG 0.478000 tig0028267:+40223 None:intergenic
AACATCAGTTCCATTTCCAT+TGG 0.479249 tig0028267:+48080 None:intergenic
TCGTATGAACACGGCGGATG+TGG 0.479286 tig0028267:-50024 Msa1437330:CDS
AGACCTTTCCCTTTCTTCAC+AGG 0.479531 tig0028267:+40818 None:intergenic
AGGCCAAAACCCATAATAAG+AGG 0.480775 tig0028267:+43109 None:intergenic
TAAATGAAGCCTCGGACAAA+GGG 0.482878 tig0028267:-41960 Msa1437330:CDS
CCTTTGTGGGATTTACTTGG+TGG 0.483871 tig0028267:-40305 Msa1437330:three_prime_UTR
TATCGAGTGAAGATAATTCC+CGG 0.488121 tig0028267:-40842 Msa1437330:CDS
ACGTAGAAAACCTTATCTGC+AGG 0.488405 tig0028267:+46840 None:intergenic
ATGATACTGTGAATTTGTTA+GGG 0.488566 tig0028267:+50072 None:intergenic
AACCAAGCAAACCTGCAGTA+AGG 0.490136 tig0028267:-42586 Msa1437330:CDS
GTGAAGGAAGAAAAGAAAGC+TGG 0.492732 tig0028267:-46969 Msa1437330:CDS
TAATAAGATACGCAACGATC+AGG 0.493363 tig0028267:-47433 Msa1437330:intron
GAGAATTATTTGGTTATCAG+TGG 0.494851 tig0028267:-45063 Msa1437330:CDS
AGAGGGTAGGTCATTTATCT+CGG 0.496475 tig0028267:-41123 Msa1437330:CDS
TTCCCGGACCTGTGAAGAAA+GGG 0.497216 tig0028267:-40826 Msa1437330:CDS
TTGAATCCCATGCCTGGCTA+TGG 0.498042 tig0028267:+43254 None:intergenic
TGCGACAACTTGGGTATGAT+CGG 0.498908 tig0028267:-48954 Msa1437330:CDS
TACGGTTTATCCCTTACTGC+AGG 0.500983 tig0028267:+42575 None:intergenic
AAGAGAATGTCAGTTGGGAG+TGG 0.502462 tig0028267:+40914 None:intergenic
TCTCGGCACATGCCAATGCT+CGG 0.502589 tig0028267:-46095 Msa1437330:CDS
TCTTGCCAAGGGTATGAGTT+GGG 0.503519 tig0028267:-47009 Msa1437330:CDS
CATATAAGAGAATGTCAGTT+GGG 0.505929 tig0028267:+40909 None:intergenic
TGGAGAAACTGCTGCAGACT+CGG 0.506095 tig0028267:-42924 Msa1437330:CDS
GAAATTCTTGATCGAGCTCT+GGG 0.511076 tig0028267:-42689 Msa1437330:CDS
TGGGATCACATTTAAATGAA+AGG 0.511113 tig0028267:-43060 Msa1437330:CDS
ATTCCCGGACCTGTGAAGAA+AGG 0.512559 tig0028267:-40827 Msa1437330:CDS
TGAGACCTTTGATTTAGCCT+TGG 0.513008 tig0028267:-47535 Msa1437330:CDS
AAAGCTGGAAACCCAGTAGC+TGG 0.513107 tig0028267:-46954 Msa1437330:CDS
TTAGTAAAACTGCTCCTACT+GGG 0.513712 tig0028267:-43192 Msa1437330:CDS
CTGACCAAGACGAGGAAGAA+AGG 0.517332 tig0028267:-42343 Msa1437330:CDS
GAGGGTAGGTCATTTATCTC+GGG 0.519641 tig0028267:-41122 Msa1437330:CDS
AAGCAAGTCTTCTGAGGGTA+TGG 0.520395 tig0028267:+42871 None:intergenic
TGACTCTACTTCGTTCTCAC+AGG 0.521243 tig0028267:-48733 Msa1437330:intron
GAAGACACTCCCTGCAGATA+AGG 0.523210 tig0028267:-46850 Msa1437330:intron
AAAACTCGACAACTTTCTAC+AGG 0.524716 tig0028267:+48180 None:intergenic
AACTAATTCAGGATCAGTAC+AGG 0.525075 tig0028267:+40437 None:intergenic
TTCAAGCTTATGAATAGTAG+TGG 0.525380 tig0028267:-49832 Msa1437330:CDS
TCACAGCCAATAATGACATT+CGG 0.528851 tig0028267:+42315 None:intergenic
GTAAAGCGTTATATGTCTAA+AGG 0.530144 tig0028267:-45012 Msa1437330:CDS
AATGTAGGTCTGCCATAGCC+AGG 0.530748 tig0028267:-43266 Msa1437330:intron
CTTAGAAGATAGAGTGGCAA+TGG 0.530917 tig0028267:-41011 Msa1437330:CDS
ATACTGTGAAACATCCTGCT+TGG 0.532770 tig0028267:+43588 None:intergenic
TTCATACCACCTCCGAGCAT+TGG 0.534659 tig0028267:+46083 None:intergenic
TGTTCGTGTATCTCTTGCCA+AGG 0.534952 tig0028267:-47021 Msa1437330:CDS
ACTTAACCAGTTTAAGTCAA+GGG 0.535357 tig0028267:-47571 Msa1437330:CDS
AGTTAGTCAAGACCCTTTGT+GGG 0.536001 tig0028267:-40318 Msa1437330:exon
TTTGCGCATATGCGAAATTG+AGG 0.540736 tig0028267:+45125 None:intergenic
TAAATTGAAGAGAAGCAGAA+GGG 0.543437 tig0028267:+50112 None:intergenic
TACTTAACCAGTTTAAGTCA+AGG 0.543776 tig0028267:-47572 Msa1437330:CDS
AAGGAGGGTAAGAGGAGAGG+AGG 0.543851 tig0028267:-43041 Msa1437330:CDS
GTAAATTGAAGAGAAGCAGA+AGG 0.544015 tig0028267:+50111 None:intergenic
AATGTGAAGATAACTGCAGC+TGG 0.545052 tig0028267:-40399 Msa1437330:CDS
ACAGCAAAATTGAGAGTCAA+AGG 0.546298 tig0028267:-47503 Msa1437330:CDS
TGAAAGGAGGGTAAGAGGAG+AGG 0.547133 tig0028267:-43044 Msa1437330:CDS
GTCATCCCAACTCATACCCT+TGG 0.547185 tig0028267:+47004 None:intergenic
ATTATCCTTGGGGAGGCACT+CGG 0.547895 tig0028267:-47994 Msa1437330:CDS
AGCGGTGGAACTGGCTGCAA+AGG 0.548991 tig0028267:+43620 None:intergenic
CTCTTGCCAAGGGTATGAGT+TGG 0.549141 tig0028267:-47010 Msa1437330:CDS
AATTGTTACCAGTGCATGGT+GGG 0.550996 tig0028267:-43230 Msa1437330:CDS
CAGAGATCCATTAGGGGTAA+CGG 0.551145 tig0028267:+40190 None:intergenic
TTGGGATGACCTTGCTCGGA+TGG 0.551768 tig0028267:-46991 Msa1437330:CDS
GTCTGCAAGCAAGTCTTCTG+AGG 0.553373 tig0028267:+42865 None:intergenic
ACCAAGCAAACCTGCAGTAA+GGG 0.553730 tig0028267:-42585 Msa1437330:CDS
CTTCCTTCACCATCCGAGCA+AGG 0.553982 tig0028267:+46982 None:intergenic
GCATTGTATGGACCACATAC+GGG 0.556140 tig0028267:+40881 None:intergenic
ATCTGTCTCCCCTCAGCTTG+AGG 0.557479 tig0028267:-42711 Msa1437330:CDS
AGGATAAACCCACCATGCAC+TGG 0.560252 tig0028267:+43222 None:intergenic
CACCAAGTAAATCCCACAAA+GGG 0.560846 tig0028267:+40306 None:intergenic
TAACTACCTGATTAAGCTGT+AGG 0.561710 tig0028267:+45977 None:intergenic
GAAAATTTGAAGACCGGTGG+TGG 0.561844 tig0028267:-42422 Msa1437330:CDS
ATCATCATCAGCGGCAGCGA+TGG 0.565666 tig0028267:-50054 Msa1437330:exon
CACTTTGAAAATTATCCTTG+GGG 0.565758 tig0028267:-48004 Msa1437330:CDS
AAACTGCTGCAGACTCGGAA+AGG 0.566261 tig0028267:-42919 Msa1437330:CDS
GATGCTGAAAATTTGAAGAC+CGG 0.566696 tig0028267:-42428 Msa1437330:CDS
GCGACAACTTGGGTATGATC+GGG 0.567096 tig0028267:-48953 Msa1437330:intron
GATGAGGCTGTTAAGGCCAA+TGG 0.567360 tig0028267:-48096 Msa1437330:CDS
ATCACATTTAAATGAAAGGA+GGG 0.567523 tig0028267:-43056 Msa1437330:CDS
TCTCATCCAAGCGAAATAGC+AGG 0.568191 tig0028267:+43089 None:intergenic
AGGTCTGCCATAGCCAGGCA+TGG 0.568820 tig0028267:-43261 Msa1437330:CDS
TTCTGGAAAACCAATCAAGA+AGG 0.569329 tig0028267:-41998 Msa1437330:CDS
TTGAGGATGTGCGACAACTT+GGG 0.570461 tig0028267:-48963 Msa1437330:CDS
TTCATCCAAGGCTAAATCAA+AGG 0.570467 tig0028267:+47530 None:intergenic
ACTGGGGAATATCTGACAGT+AGG 0.570845 tig0028267:-43175 Msa1437330:CDS
CACATGCCAATGCTCGGAGG+TGG 0.571815 tig0028267:-46089 Msa1437330:CDS
GCAAAACAAAATGTTGGGGA+AGG 0.573207 tig0028267:-47785 Msa1437330:CDS
CTGGGGAATATCTGACAGTA+GGG 0.574392 tig0028267:-43174 Msa1437330:CDS
GCACATCCAAGCGATGGACA+TGG 0.577129 tig0028267:-42500 Msa1437330:CDS
ATAGATGATAATGTTGCTGA+TGG 0.578022 tig0028267:-43013 Msa1437330:CDS
CTACAGTGTTGAAACTTGGA+AGG 0.581217 tig0028267:+40227 None:intergenic
AAAGTTCGAAGATTGGATGC+AGG 0.581703 tig0028267:-47851 Msa1437330:CDS
TGTCAATTAGACCAGCTACT+GGG 0.582424 tig0028267:+46943 None:intergenic
TGAGTTGGGATGACCTTGCT+CGG 0.582857 tig0028267:-46995 Msa1437330:CDS
TGACCTTGCTCGGATGGTGA+AGG 0.583031 tig0028267:-46985 Msa1437330:CDS
GATCACATTTAAATGAAAGG+AGG 0.583189 tig0028267:-43057 Msa1437330:CDS
TCTATTTCAATTCGGACTTG+GGG 0.583787 tig0028267:-48831 Msa1437330:CDS
TGCAGCCAAACTAGTTTGAG+AGG 0.584392 tig0028267:+42841 None:intergenic
TGTTGCTGATGGAGGAGAGG+AGG 0.584835 tig0028267:-43002 Msa1437330:CDS
AAGTACCCAAAGATAAAGTG+TGG 0.586074 tig0028267:-47912 Msa1437330:CDS
GATGATAATGTTGCTGATGG+AGG 0.586492 tig0028267:-43010 Msa1437330:CDS
TCCAAGCGATGGACATGGAA+AGG 0.586944 tig0028267:-42495 Msa1437330:CDS
AAACCCATAATAAGAGGGTG+TGG 0.596433 tig0028267:+43115 None:intergenic
GAGAAATTATCTGACTTCAG+TGG 0.596681 tig0028267:-42746 Msa1437330:CDS
ATACTAGAGCTATATGCTCA+AGG 0.596697 tig0028267:-48791 Msa1437330:CDS
CCCATAATAAGAGGGTGTGG+TGG 0.597080 tig0028267:+43118 None:intergenic
TGATGCAAAACAAAATGTTG+GGG 0.598164 tig0028267:-47789 Msa1437330:CDS
AGAATTGATAGAATATAACT+TGG 0.598315 tig0028267:-47069 Msa1437330:CDS
GGTCTGCCATAGCCAGGCAT+GGG 0.598811 tig0028267:-43260 Msa1437330:CDS
CAAGAATTTCCTCAAGCTGA+GGG 0.599666 tig0028267:+42702 None:intergenic
CTTGTCCTTAGAAGATAGAG+TGG 0.599708 tig0028267:-41017 Msa1437330:CDS
GCTGCAGACTCGGAAAGGAA+TGG 0.600310 tig0028267:-42914 Msa1437330:CDS
TACTACTGTTAGATAGGCAA+CGG 0.601548 tig0028267:-40158 Msa1437330:three_prime_UTR
GCATATAAGAGAATGTCAGT+TGG 0.601563 tig0028267:+40908 None:intergenic
GATTTGTTGCTTCTGACATG+TGG 0.602826 tig0028267:+40481 None:intergenic
GACAGCCCTAACATCTTCCA+AGG 0.606811 tig0028267:-48130 Msa1437330:CDS
ATTACCTGTAAATGAAGCCT+CGG 0.607254 tig0028267:-41968 Msa1437330:CDS
GAGCACATGATATTAGATGC+CGG 0.607506 tig0028267:-47952 Msa1437330:CDS
TATTCGAACTAGAAGGCTTG+AGG 0.609885 tig0028267:-48980 Msa1437330:CDS
TCAAGAATTTCCTCAAGCTG+AGG 0.610198 tig0028267:+42701 None:intergenic
TTTGAAAATTATCCTTGGGG+AGG 0.610247 tig0028267:-48001 Msa1437330:CDS
TAGTAAAACTGCTCCTACTG+GGG 0.610654 tig0028267:-43191 Msa1437330:CDS
CCGCTGACCCTAAACCAAGC+AGG 0.611403 tig0028267:-43602 Msa1437330:CDS
TCTGAGAAGAATGTTGCTGA+TGG 0.611457 tig0028267:-42944 Msa1437330:CDS
GGAGAAGCACATCCAAGCGA+TGG 0.611586 tig0028267:-42506 Msa1437330:CDS
TTTGCTGTAGAATTCATCCA+AGG 0.611906 tig0028267:+47518 None:intergenic
TGTTACAAGTGTAAGAGGGT+AGG 0.612164 tig0028267:-41136 Msa1437330:CDS
AGAAGCAACAAATCGTGAGA+AGG 0.613858 tig0028267:-40472 Msa1437330:CDS
GCTTGGTTTAGGGTCAGCGG+TGG 0.615977 tig0028267:+43605 None:intergenic
GGACCTGTGAAGAAAGGGAA+AGG 0.618912 tig0028267:-40821 Msa1437330:intron
ACTGTCAGATATTCCCCAGT+AGG 0.621787 tig0028267:+43178 None:intergenic
CCACCAAGTAAATCCCACAA+AGG 0.622139 tig0028267:+40305 None:intergenic
TCGGAGACATTTCACTTCGG+CGG 0.623005 tig0028267:+50001 None:intergenic
ATCATGTGCTCAGACAGTGC+AGG 0.624086 tig0028267:+47964 None:intergenic
AATTTAAGTGTAAAACCAGA+AGG 0.625176 tig0028267:+49012 None:intergenic
TCAGGTGAAATAGTTCCAGA+AGG 0.625282 tig0028267:-47820 Msa1437330:CDS
GGCCAAAACCCATAATAAGA+GGG 0.627336 tig0028267:+43110 None:intergenic
ATCAGCGGCAGCGATGGTGA+AGG 0.627423 tig0028267:-50048 Msa1437330:exon
CCTGCTTGGTTTAGGGTCAG+CGG 0.630422 tig0028267:+43602 None:intergenic
TCAAGGCAACGTCATCCTCA+CGG 0.632859 tig0028267:-48774 Msa1437330:CDS
AATATGTTACAAGTGTAAGA+GGG 0.635432 tig0028267:-41140 Msa1437330:CDS
TGAATCTGGTGAGAGCGAGA+AGG 0.639102 tig0028267:-49803 Msa1437330:CDS
CGTAGAAAACCTTATCTGCA+GGG 0.640657 tig0028267:+46841 None:intergenic
CGGCACATGCCAATGCTCGG+AGG 0.643683 tig0028267:-46092 Msa1437330:CDS
AAATTGTTACCAGTGCATGG+TGG 0.648547 tig0028267:-43231 Msa1437330:CDS
TCTGCAAGCAAGTCTTCTGA+GGG 0.651636 tig0028267:+42866 None:intergenic
AGTACCCAAAGATAAAGTGT+GGG 0.652866 tig0028267:-47911 Msa1437330:CDS
TAATGTTGCTGATGGAGGAG+AGG 0.653586 tig0028267:-43005 Msa1437330:CDS
GTTCGTGTATCTCTTGCCAA+GGG 0.653654 tig0028267:-47020 Msa1437330:CDS
CATAACCGAGTGCCTCCCCA+AGG 0.653654 tig0028267:+47989 None:intergenic
CAAGGAAGATGACAATGATG+AGG 0.654799 tig0028267:-48112 Msa1437330:CDS
GAAGTATGCTGACCAAGACG+AGG 0.656394 tig0028267:-42351 Msa1437330:CDS
TTAACAGGGATGATGATAAG+GGG 0.667332 tig0028267:-48230 Msa1437330:intron
ATGATGTGGATTACTTAACA+GGG 0.669233 tig0028267:-40940 Msa1437330:CDS
ACGTCGGAGACATTTCACTT+CGG 0.672439 tig0028267:+49998 None:intergenic
AAAAGAGCAGTGCCAAACAA+GGG 0.672610 tig0028267:-40341 Msa1437330:CDS
TACACACTACTGTCTATATG+CGG 0.676934 tig0028267:-49750 Msa1437330:intron
TAAACTGGTTAAGTAAGATG+GGG 0.677125 tig0028267:+47580 None:intergenic
AAGAATTTCCTCAAGCTGAG+GGG 0.677466 tig0028267:+42703 None:intergenic
TATGTGCATGCTGAACTGCA+TGG 0.678899 tig0028267:-43674 Msa1437330:CDS
AATCAAATTGTTCTTCAACA+GGG 0.681729 tig0028267:+42972 None:intergenic
ATTCACAGTATCATCATCAG+CGG 0.695747 tig0028267:-50063 Msa1437330:five_prime_UTR
CAGTGAAACTAGAATCCGTG+AGG 0.709696 tig0028267:+48759 None:intergenic
TTGGACCAAAGCCTGAACAG+TGG 0.711476 tig0028267:+47882 None:intergenic
GGTGAAGGTTCGTATGAACA+CGG 0.712487 tig0028267:-50033 Msa1437330:CDS
GTAGGGAGTTTCATGATACG+AGG 0.718878 tig0028267:-43157 Msa1437330:CDS
ATCGCATTCCGATTAAACGT+CGG 0.720844 tig0028267:+49982 None:intergenic
GCTGAAAATTTGAAGACCGG+TGG 0.725719 tig0028267:-42425 Msa1437330:CDS
ACCCAACAGAGATCCATTAG+GGG 0.757722 tig0028267:+40184 None:intergenic
AGAAGGTTAACGAACCTTGG+GGG 0.769133 tig0028267:+49938 None:intergenic
GAAGGTTCGTATGAACACGG+CGG 0.823247 tig0028267:-50030 Msa1437330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTAATGTAATTTTTTTTTTA+TGG - tig0028267:43052-43071 Msa1437330:CDS 10.0%
!! ATATAATTATATTATAATGG+TGG + tig0028267:43812-43831 None:intergenic 10.0%
!! AAAAAAGAAAGAAAAAAAAA+AGG + tig0028267:44614-44633 None:intergenic 10.0%
!! AATATAAAGAAAAGATTAAA+GGG + tig0028267:46355-46374 None:intergenic 10.0%
!! TTATATAAATTTAACATCTA+TGG + tig0028267:48009-48028 None:intergenic 10.0%
!! TATTCTAATTTAAAAGTTTA+GGG + tig0028267:48042-48061 None:intergenic 10.0%
!! AATATTACATATAGAATAAA+AGG + tig0028267:48508-48527 None:intergenic 10.0%
!! AAATTAACCTTATTAATTAT+AGG + tig0028267:48774-48793 None:intergenic 10.0%
!!! TCATTTTCTCAAATTATTAT+TGG + tig0028267:40624-40643 None:intergenic 15.0%
!!! CTATAAGTTATTTTATTGTT+TGG + tig0028267:40969-40988 None:intergenic 15.0%
!! TACTTGTTTATCTATATTAT+TGG - tig0028267:41847-41866 Msa1437330:intron 15.0%
!! ACTTGTTTATCTATATTATT+GGG - tig0028267:41848-41867 Msa1437330:intron 15.0%
!! TATTTGGATATAAACAAAAA+TGG + tig0028267:42891-42910 None:intergenic 15.0%
!!! TAATTTTTTTTTTATGGTGT+AGG - tig0028267:43058-43077 Msa1437330:CDS 15.0%
!! ATCCTAAATAAAAAGAATAT+AGG - tig0028267:43451-43470 Msa1437330:intron 15.0%
!!! ATCCTATATTCTTTTTATTT+AGG + tig0028267:43456-43475 None:intergenic 15.0%
!!! CTTTCAAATATTAAACTTTT+GGG + tig0028267:43663-43682 None:intergenic 15.0%
!!! ACTTTCAAATATTAAACTTT+TGG + tig0028267:43664-43683 None:intergenic 15.0%
!! TGAAAAAAAATTCATTAATG+TGG + tig0028267:44687-44706 None:intergenic 15.0%
!! TTAAAACTTAAGAAAAACAA+CGG + tig0028267:44718-44737 None:intergenic 15.0%
!!! TTTTCTTAAGTTTTAATGAA+AGG - tig0028267:44722-44741 Msa1437330:intron 15.0%
!!! AATGTTATTTTCAAATTTCA+AGG - tig0028267:44807-44826 Msa1437330:intron 15.0%
!!! ATGTTATTTTCAAATTTCAA+GGG - tig0028267:44808-44827 Msa1437330:intron 15.0%
!!! TTTTTAACTAAATTTTATCC+AGG - tig0028267:45042-45061 Msa1437330:CDS 15.0%
!! TATACATGATTAAGAAAAAT+TGG - tig0028267:45448-45467 Msa1437330:intron 15.0%
!!! GTTTTTCTTTTTTATAGTTT+AGG - tig0028267:45658-45677 Msa1437330:intron 15.0%
!! AAAAACAAATCATCAAAAAT+TGG + tig0028267:45961-45980 None:intergenic 15.0%
!! ATATAAAGAAAAGATTAAAG+GGG + tig0028267:46354-46373 None:intergenic 15.0%
!! GAATATAAAGAAAAGATTAA+AGG + tig0028267:46356-46375 None:intergenic 15.0%
!! ATAACATTATTTAACAGAAA+GGG + tig0028267:46505-46524 None:intergenic 15.0%
!! TATAACATTATTTAACAGAA+AGG + tig0028267:46506-46525 None:intergenic 15.0%
!! TTTCTGTTAAATAATGTTAT+AGG - tig0028267:46505-46524 Msa1437330:intron 15.0%
!!! ACAGTTATTTTTAATCTTTT+AGG - tig0028267:46808-46827 Msa1437330:intron 15.0%
!!! CAGTTATTTTTAATCTTTTA+GGG - tig0028267:46809-46828 Msa1437330:intron 15.0%
!!! TTCATAACTTTTATTTGATT+TGG + tig0028267:47553-47572 None:intergenic 15.0%
!! CTATTCTAATTTAAAAGTTT+AGG + tig0028267:48043-48062 None:intergenic 15.0%
!!! TATTAAATGAACATCGATTT+TGG - tig0028267:40512-40531 Msa1437330:CDS 20.0%
!!! ACTTATTTGAGTTTATCTAT+TGG - tig0028267:40539-40558 Msa1437330:intron 20.0%
!!! AGTTATTTTATTGTTTGGAT+TGG + tig0028267:40964-40983 None:intergenic 20.0%
!! GAATGTTATTGTTATAGAAT+TGG - tig0028267:41108-41127 Msa1437330:CDS 20.0%
!! ATAACAAGTGAAATAAAAGA+TGG + tig0028267:41293-41312 None:intergenic 20.0%
!!! TTTTCTAGCTTAATTATGAT+AGG - tig0028267:41593-41612 Msa1437330:intron 20.0%
!! CTTGTTTATCTATATTATTG+GGG - tig0028267:41849-41868 Msa1437330:intron 20.0%
!!! ATCTATATTTCTATAGTAAG+AGG - tig0028267:41931-41950 Msa1437330:intron 20.0%
!! TAAAGCAATTTATCATTAAC+AGG - tig0028267:41957-41976 Msa1437330:CDS 20.0%
!! AAAGCAATTTATCATTAACA+GGG - tig0028267:41958-41977 Msa1437330:CDS 20.0%
!! TTGTTTATATCCAAATATCT+TGG - tig0028267:42894-42913 Msa1437330:CDS 20.0%
!! AGAATTGATAGAATATAACT+TGG - tig0028267:43133-43152 Msa1437330:CDS 20.0%
!!! CGTAAACTAATGAATTTTTA+CGG + tig0028267:43537-43556 None:intergenic 20.0%
!!! CGATGAAAAATTTAAGATAA+TGG + tig0028267:43951-43970 None:intergenic 20.0%
!!! TTTCTGTTTTCTTAAATATG+TGG - tig0028267:44004-44023 Msa1437330:intron 20.0%
!! TTATAACCATAAATACAACA+TGG + tig0028267:44439-44458 None:intergenic 20.0%
!! TAACTATGAGATATATGTAA+TGG - tig0028267:44753-44772 Msa1437330:intron 20.0%
!!! CATTTTGACTAAATAGTATA+TGG + tig0028267:44791-44810 None:intergenic 20.0%
!!! AATATTTAAGTTTTAGCCAT+AGG + tig0028267:45264-45283 None:intergenic 20.0%
!!! TAATGACGAAAGTATTAATT+TGG - tig0028267:45303-45322 Msa1437330:intron 20.0%
!!! TTAATATCTTTTTCTAAACC+AGG - tig0028267:45401-45420 Msa1437330:intron 20.0%
!! TCTAATATCATCTTAGAATT+TGG + tig0028267:45741-45760 None:intergenic 20.0%
!!! TCCAATTTTATGAGATTTTA+AGG - tig0028267:46087-46106 Msa1437330:CDS 20.0%
!! ACCTTAAAATCTCATAAAAT+TGG + tig0028267:46091-46110 None:intergenic 20.0%
!!! AAGGAATTCTTAAATTTTCA+AGG - tig0028267:46156-46175 Msa1437330:intron 20.0%
!!! CTATTTCATTACATGTTTTA+TGG - tig0028267:46183-46202 Msa1437330:intron 20.0%
!!! TTTCTCTTTATGTTTTTCAA+TGG - tig0028267:46385-46404 Msa1437330:intron 20.0%
!! AATTTAGACAAAACATAGTA+TGG + tig0028267:46653-46672 None:intergenic 20.0%
!! TGATCTAAATCAAATTGTAA+CGG - tig0028267:46689-46708 Msa1437330:intron 20.0%
!! TAGCCTATTTATTACTTTAT+TGG - tig0028267:46771-46790 Msa1437330:intron 20.0%
!! ATGCCAATAAAGTAATAAAT+AGG + tig0028267:46777-46796 None:intergenic 20.0%
!! TCAAAGTTAAAAGATATTTC+TGG - tig0028267:47735-47754 Msa1437330:intron 20.0%
!! AATCTTGTTCTGATTTAAAT+TGG - tig0028267:48338-48357 Msa1437330:intron 20.0%
!! ATCTTGTTCTGATTTAAATT+GGG - tig0028267:48339-48358 Msa1437330:intron 20.0%
!!! TTTATATGAACCAATTTGTT+TGG - tig0028267:48385-48404 Msa1437330:intron 20.0%
!! CAAATAAGCTTGAATAATTT+AGG - tig0028267:48421-48440 Msa1437330:intron 20.0%
!!! CTATATGTAATATTTTAGCA+TGG - tig0028267:48514-48533 Msa1437330:intron 20.0%
!! AAGTGATGCAAATAATTATA+GGG + tig0028267:48701-48720 None:intergenic 20.0%
!! TGACTTTGTATTTATGATAA+TGG - tig0028267:48736-48755 Msa1437330:CDS 20.0%
!! ATAATACAGTAAACAAGTTA+AGG + tig0028267:49006-49025 None:intergenic 20.0%
!! CTGTATTATAATGTTTATTG+TGG - tig0028267:49017-49036 Msa1437330:CDS 20.0%
!!! TTACACTTGTAACATATTTT+CGG + tig0028267:49060-49079 None:intergenic 20.0%
!! GAAGATGATATTAATGAAAT+AGG - tig0028267:49216-49235 Msa1437330:intron 20.0%
!! AAAATAGAGAGAATGATAAA+TGG + tig0028267:49576-49595 None:intergenic 20.0%
!! AAATAACATCGATAAATAAC+TGG - tig0028267:50081-50100 Msa1437330:five_prime_UTR 20.0%
!!! ATGATACTGTGAATTTGTTA+GGG + tig0028267:40133-40152 None:intergenic 25.0%
! TGGTGAAATTGAATTGAAAA+GGG + tig0028267:40302-40321 None:intergenic 25.0%
! ATGGTGAAATTGAATTGAAA+AGG + tig0028267:40303-40322 None:intergenic 25.0%
!!! TAAGTTTTGTGAAACTGTTT+GGG + tig0028267:40917-40936 None:intergenic 25.0%
!!! ATAAGTTTTGTGAAACTGTT+TGG + tig0028267:40918-40937 None:intergenic 25.0%
!!! ACAACTTAATTTGCAACTTA+TGG + tig0028267:41062-41081 None:intergenic 25.0%
! AATTTAAGTGTAAAACCAGA+AGG + tig0028267:41193-41212 None:intergenic 25.0%
! TAAAAGATGGTTCAAATTGA+AGG + tig0028267:41280-41299 None:intergenic 25.0%
! CAGATTGTTCTATTTCAATT+CGG - tig0028267:41363-41382 Msa1437330:intron 25.0%
! TCCATTTGTAAATTTCAGTT+TGG - tig0028267:41523-41542 Msa1437330:intron 25.0%
! ACCAAACTGAAATTTACAAA+TGG + tig0028267:41527-41546 None:intergenic 25.0%
!! AAAGAAGAATTTGTTTAGAG+AGG - tig0028267:41641-41660 Msa1437330:intron 25.0%
! TTTGATGCAAAACAAAATGT+TGG - tig0028267:42411-42430 Msa1437330:CDS 25.0%
! TTGATGCAAAACAAAATGTT+GGG - tig0028267:42412-42431 Msa1437330:CDS 25.0%
! TTAAACTGGTTAAGTAAGAT+GGG + tig0028267:42626-42645 None:intergenic 25.0%
! ATCATACAATTGTAGTAGTT+TGG + tig0028267:42808-42827 None:intergenic 25.0%
! AACTACTACAATTGTATGAT+TGG - tig0028267:42808-42827 Msa1437330:CDS 25.0%
! GGATATAAACAAAAATGGAA+TGG + tig0028267:42886-42905 None:intergenic 25.0%
! AGCTGATAACTGTATTAAAA+TGG - tig0028267:43109-43128 Msa1437330:CDS 25.0%
!! TTTGTTATGCATAATAACCA+AGG + tig0028267:43756-43775 None:intergenic 25.0%
! TAACCAAACATAACATGATA+AGG - tig0028267:43838-43857 Msa1437330:intron 25.0%
! ATTCCTTATCATGTTATGTT+TGG + tig0028267:43844-43863 None:intergenic 25.0%
! CAATATTCTATCGTTACTAA+TGG + tig0028267:44060-44079 None:intergenic 25.0%
!!! AGCTTTAAAAGCTTTTTCAT+GGG + tig0028267:44188-44207 None:intergenic 25.0%
! TAAACTTCTTAGATGTTGAA+AGG + tig0028267:44405-44424 None:intergenic 25.0%
! CAACATCTAAGAAGTTTATT+TGG - tig0028267:44407-44426 Msa1437330:intron 25.0%
!!! CTTTCTTTTTTTCTTTTCCT+AGG - tig0028267:44623-44642 Msa1437330:intron 25.0%
! TTAATGTGGAGAAAGAAAAA+AGG + tig0028267:44673-44692 None:intergenic 25.0%
!! GATATATGTAATGGCATTTT+TGG - tig0028267:44762-44781 Msa1437330:intron 25.0%
! TTTGGGAGATATAAAAGTTA+AGG + tig0028267:44893-44912 None:intergenic 25.0%
!! AATATCACTAGTCACATTTT+GGG + tig0028267:44910-44929 None:intergenic 25.0%
!!! ACTGGTTTGAGAAATTTAAT+TGG - tig0028267:45104-45123 Msa1437330:CDS 25.0%
! ACATGATTAAGAAAAATTGG+TGG - tig0028267:45451-45470 Msa1437330:intron 25.0%
!! ATTTTGTATTGAACATCACA+GGG + tig0028267:45496-45515 None:intergenic 25.0%
!! AATTTTGTATTGAACATCAC+AGG + tig0028267:45497-45516 None:intergenic 25.0%
! TAGAATACCAATTGTCAATT+AGG - tig0028267:45548-45567 Msa1437330:intron 25.0%
! AGAATACCAATTGTCAATTA+GGG - tig0028267:45549-45568 Msa1437330:intron 25.0%
!! ACATGTTTTATGGTATAAAG+TGG - tig0028267:46193-46212 Msa1437330:intron 25.0%
!!! CTGATTTTTTTTTCTCTTGT+AGG - tig0028267:46311-46330 Msa1437330:intron 25.0%
!! TTTTCATAAAATCTGTCTCT+AGG + tig0028267:46723-46742 None:intergenic 25.0%
!! GAGACAGATTTTATGAAAAA+AGG - tig0028267:46724-46743 Msa1437330:intron 25.0%
! TAATAGTTAGCAATTGTGTT+AGG + tig0028267:46896-46915 None:intergenic 25.0%
! ATCACATTTAAATGAAAGGA+GGG - tig0028267:47146-47165 Msa1437330:intron 25.0%
! AATCAAATTGTTCTTCAACA+GGG + tig0028267:47233-47252 None:intergenic 25.0%
!!! ATTTGAAGTTTTATTGTGTC+TGG - tig0028267:47954-47973 Msa1437330:CDS 25.0%
! AAGATGCAAAAATCAATTCA+AGG + tig0028267:48124-48143 None:intergenic 25.0%
!!! TGTTGATTTAACTTTAAAGC+TGG - tig0028267:48166-48185 Msa1437330:CDS 25.0%
! AAAATTCAAGCTGAAGATTA+AGG + tig0028267:48368-48387 None:intergenic 25.0%
! ACAAATGACACTTATTAAGA+GGG + tig0028267:48562-48581 None:intergenic 25.0%
! TACAAATGACACTTATTAAG+AGG + tig0028267:48563-48582 None:intergenic 25.0%
!!! GTGTCATTTGTAAAGAAAAA+AGG - tig0028267:48571-48590 Msa1437330:intron 25.0%
! AAATAATTATAGGGTACGAT+TGG + tig0028267:48692-48711 None:intergenic 25.0%
! GAAGTGATGCAAATAATTAT+AGG + tig0028267:48702-48721 None:intergenic 25.0%
!!! CTTTGTATTTATGATAATGG+TGG - tig0028267:48739-48758 Msa1437330:CDS 25.0%
! ACACACACCTATAATTAATA+AGG - tig0028267:48764-48783 Msa1437330:CDS 25.0%
! TTACAGTGAAGTTTATATCT+CGG + tig0028267:48935-48954 None:intergenic 25.0%
! ATTATAATGTTTATTGTGGC+AGG - tig0028267:49021-49040 Msa1437330:CDS 25.0%
! AAATATGTTACAAGTGTAAG+AGG - tig0028267:49061-49080 Msa1437330:intron 25.0%
! AATATGTTACAAGTGTAAGA+GGG - tig0028267:49062-49081 Msa1437330:intron 25.0%
!!! GATCAATTGATGATGAAAAA+AGG + tig0028267:49424-49443 None:intergenic 25.0%
!!! TAACATAAGAAGTTTTAAGC+AGG + tig0028267:49452-49471 None:intergenic 25.0%
! TTGAAGCAAAAACAAAAGAA+AGG - tig0028267:49836-49855 Msa1437330:CDS 25.0%
!!! TTGGTGGAAAATGTTTTTTT+TGG - tig0028267:49913-49932 Msa1437330:intron 25.0%
TAAATTGAAGAGAAGCAGAA+GGG + tig0028267:40093-40112 None:intergenic 30.0%
! GATGATACTGTGAATTTGTT+AGG + tig0028267:40134-40153 None:intergenic 30.0%
TGAATTGAAAAGGGAGAAAA+AGG + tig0028267:40293-40312 None:intergenic 30.0%
TTCAAGCTTATGAATAGTAG+TGG - tig0028267:40370-40389 Msa1437330:CDS 30.0%
TAAAACACAGACACATATAG+TGG - tig0028267:40581-40600 Msa1437330:intron 30.0%
!! TTCTCGGCTTATTTTCATAA+AGG - tig0028267:40665-40684 Msa1437330:intron 30.0%
ATAAGCCGTTTATCTAAACA+GGG + tig0028267:40691-40710 None:intergenic 30.0%
AATAAGCCGTTTATCTAAAC+AGG + tig0028267:40692-40711 None:intergenic 30.0%
ATAAGCTATCTCTATTACAC+AGG + tig0028267:41022-41041 None:intergenic 30.0%
!!! CTGGTTTTACACTTAAATTG+AGG - tig0028267:41194-41213 Msa1437330:intron 30.0%
TTCTATTTCAATTCGGACTT+GGG - tig0028267:41370-41389 Msa1437330:intron 30.0%
AGATAAGCAAAGTTGTTTGT+TGG + tig0028267:41572-41591 None:intergenic 30.0%
GGAAATAAGTATACTTAGAG+AGG - tig0028267:41662-41681 Msa1437330:intron 30.0%
AAGTATACTTAGAGAGGATT+CGG - tig0028267:41668-41687 Msa1437330:intron 30.0%
ATTAACAGGGATGATGATAA+GGG - tig0028267:41971-41990 Msa1437330:CDS 30.0%
AATGTAGAAAAAGAGAAGCA+GGG - tig0028267:42148-42167 Msa1437330:intron 30.0%
! CCACTTTGAAAATTATCCTT+GGG - tig0028267:42197-42216 Msa1437330:intron 30.0%
! CACTTTGAAAATTATCCTTG+GGG - tig0028267:42198-42217 Msa1437330:intron 30.0%
! TTTTTCATTGGGGATTAAAC+CGG + tig0028267:42272-42291 None:intergenic 30.0%
!!! TCTTTGGGTACTTTTTCATT+GGG + tig0028267:42283-42302 None:intergenic 30.0%
!!! ATCTTTGGGTACTTTTTCAT+TGG + tig0028267:42284-42303 None:intergenic 30.0%
TGCATCAAAATATATCCTTC+TGG + tig0028267:42400-42419 None:intergenic 30.0%
TGATGCAAAACAAAATGTTG+GGG - tig0028267:42413-42432 Msa1437330:CDS 30.0%
! ATAACCTGTTTAAGACTTTC+TGG + tig0028267:42460-42479 None:intergenic 30.0%
AAAGTAGCATCATGAATATG+AGG - tig0028267:42499-42518 Msa1437330:CDS 30.0%
ATATGAGGAGAATGAGAATA+AGG - tig0028267:42514-42533 Msa1437330:CDS 30.0%
TATGAGGAGAATGAGAATAA+GGG - tig0028267:42515-42534 Msa1437330:CDS 30.0%
AGAAAATATGTTACCTCAGA+TGG - tig0028267:42538-42557 Msa1437330:CDS 30.0%
TAAACTGGTTAAGTAAGATG+GGG + tig0028267:42625-42644 None:intergenic 30.0%
CTTAAACTGGTTAAGTAAGA+TGG + tig0028267:42627-42646 None:intergenic 30.0%
TACTTAACCAGTTTAAGTCA+AGG - tig0028267:42630-42649 Msa1437330:CDS 30.0%
ACTTAACCAGTTTAAGTCAA+GGG - tig0028267:42631-42650 Msa1437330:CDS 30.0%
AATTGTAGTAGTTTGGACAT+GGG + tig0028267:42801-42820 None:intergenic 30.0%
GGAAAATCAACTGAATCATT+TGG - tig0028267:42829-42848 Msa1437330:CDS 30.0%
GCTTCTTGTAATAATACACA+TGG - tig0028267:42925-42944 Msa1437330:CDS 30.0%
CAACTTCATATGAATACTGA+AGG + tig0028267:42960-42979 None:intergenic 30.0%
AGTAATACACATATTTCAGG+AGG + tig0028267:43598-43617 None:intergenic 30.0%
GAGAGTAATACACATATTTC+AGG + tig0028267:43601-43620 None:intergenic 30.0%
AATTTGTAGGCCAAACAAAT+TGG + tig0028267:43723-43742 None:intergenic 30.0%
AGGTGTCTTAAAGAATTTGT+AGG + tig0028267:43736-43755 None:intergenic 30.0%
!! ACAAATTCTTTAAGACACCT+TGG - tig0028267:43736-43755 Msa1437330:intron 30.0%
AAGGAATCAAAAAGTTTGAC+CGG - tig0028267:43857-43876 Msa1437330:intron 30.0%
ACCTTATGTCCCATTATTAT+AGG - tig0028267:43907-43926 Msa1437330:intron 30.0%
! TCCTATAATAATGGGACATA+AGG + tig0028267:43911-43930 None:intergenic 30.0%
TTATGTCCCATTATTATAGG+AGG - tig0028267:43910-43929 Msa1437330:intron 30.0%
TATGTCCCATTATTATAGGA+GGG - tig0028267:43911-43930 Msa1437330:intron 30.0%
ATACACCCTCCTATAATAAT+GGG + tig0028267:43919-43938 None:intergenic 30.0%
TTACTAATGGTATTCATCCA+AGG + tig0028267:44047-44066 None:intergenic 30.0%
ACGATAGAATATTGTGTTCA+AGG - tig0028267:44066-44085 Msa1437330:intron 30.0%
GTATGAACTGAAGAAAAAAC+AGG - tig0028267:44135-44154 Msa1437330:intron 30.0%
!!! CAGCTTTAAAAGCTTTTTCA+TGG + tig0028267:44189-44208 None:intergenic 30.0%
!!! TGAAAAAGCTTTTAAAGCTG+CGG - tig0028267:44189-44208 Msa1437330:intron 30.0%
CTTGCAAAAGAGTAAATCTA+TGG - tig0028267:44318-44337 Msa1437330:intron 30.0%
AACTCTTACTATCCAAAACT+TGG + tig0028267:44377-44396 None:intergenic 30.0%
TCATGACCATGTTGTATTTA+TGG - tig0028267:44430-44449 Msa1437330:intron 30.0%
GAAAAAAAAAAGACAGCAGT+TGG + tig0028267:44837-44856 None:intergenic 30.0%
! GAATATCACTAGTCACATTT+TGG + tig0028267:44911-44930 None:intergenic 30.0%
CCAAAAATGAAAAAGTAGAC+AGG + tig0028267:44991-45010 None:intergenic 30.0%
!!! CCTGTCTACTTTTTCATTTT+TGG - tig0028267:44988-45007 Msa1437330:intron 30.0%
CATTAGCAGTGAGAATTATT+TGG - tig0028267:45129-45148 Msa1437330:CDS 30.0%
GAGAATTATTTGGTTATCAG+TGG - tig0028267:45139-45158 Msa1437330:CDS 30.0%
! TACTATCATCTCATTTTGCT+GGG + tig0028267:45173-45192 None:intergenic 30.0%
! TTACTATCATCTCATTTTGC+TGG + tig0028267:45174-45193 None:intergenic 30.0%
! GTAAAGCGTTATATGTCTAA+AGG - tig0028267:45190-45209 Msa1437330:intron 30.0%
! TTTCTGAATTCCTTTTCCTA+TGG - tig0028267:45245-45264 Msa1437330:intron 30.0%
!! TAAGTTTTAGCCATAGGAAA+AGG + tig0028267:45258-45277 None:intergenic 30.0%
! TTTTGCATTAAATGTAAGCC+TGG + tig0028267:45422-45441 None:intergenic 30.0%
GTATTCTAACTACAGAGAAA+AGG + tig0028267:45536-45555 None:intergenic 30.0%
GAGTCTATCTTAGATAGATT+AGG - tig0028267:45759-45778 Msa1437330:intron 30.0%
TTTAACCCAACTCTAATTCT+AGG - tig0028267:45924-45943 Msa1437330:intron 30.0%
AAACTCCTAGAATTAGAGTT+GGG + tig0028267:45932-45951 None:intergenic 30.0%
AAAACTCCTAGAATTAGAGT+TGG + tig0028267:45933-45952 None:intergenic 30.0%
CAGTCATATAAACTAGGTAT+TGG + tig0028267:46246-46265 None:intergenic 30.0%
TTCAATGGTAAAATTGCTCT+AGG - tig0028267:46400-46419 Msa1437330:intron 30.0%
TTACAATAAAAGCCATTGCA+TGG - tig0028267:46861-46880 Msa1437330:CDS 30.0%
TGGGATCACATTTAAATGAA+AGG - tig0028267:47142-47161 Msa1437330:intron 30.0%
GATCACATTTAAATGAAAGG+AGG - tig0028267:47145-47164 Msa1437330:intron 30.0%
! ATAGATGATAATGTTGCTGA+TGG - tig0028267:47189-47208 Msa1437330:intron 30.0%
GAATCAAATTGTTCTTCAAC+AGG + tig0028267:47234-47253 None:intergenic 30.0%
! CTCTCAGCTTTTGATATATA+CGG + tig0028267:47648-47667 None:intergenic 30.0%
CTTAAAAATGAACCGAAACA+TGG - tig0028267:47675-47694 Msa1437330:intron 30.0%
GGGAAAACTTAAGAAGATAA+AGG - tig0028267:47827-47846 Msa1437330:CDS 30.0%
! TTTGCATCTTTTTATATCCG+TGG - tig0028267:48134-48153 Msa1437330:CDS 30.0%
AATCAACACAATTTCATCCA+CGG + tig0028267:48154-48173 None:intergenic 30.0%
! TATGAACCAATTTGTTTGGA+TGG - tig0028267:48389-48408 Msa1437330:intron 30.0%
! ATGAACCAATTTGTTTGGAT+GGG - tig0028267:48390-48409 Msa1437330:intron 30.0%
ATGCACATAATGACTTAGAA+GGG + tig0028267:48635-48654 None:intergenic 30.0%
CAAAGTCAAAGATAATGACT+CGG + tig0028267:48724-48743 None:intergenic 30.0%
TCTTTGATTGCTTCAAAGTT+TGG + tig0028267:48818-48837 None:intergenic 30.0%
GTAATCAGTTAATAGATACG+AGG + tig0028267:48913-48932 None:intergenic 30.0%
ATTAGACAGTAAACCAATTG+AGG - tig0028267:48955-48974 Msa1437330:CDS 30.0%
GAAAGAAAAACTGAATGATG+TGG - tig0028267:49248-49267 Msa1437330:intron 30.0%
! AATGATGTGGATTACTTAAC+AGG - tig0028267:49261-49280 Msa1437330:intron 30.0%
! ATGATGTGGATTACTTAACA+GGG - tig0028267:49262-49281 Msa1437330:intron 30.0%
CATATAAGAGAATGTCAGTT+GGG + tig0028267:49296-49315 None:intergenic 30.0%
TAAGATTGAACTGCATTGTA+TGG + tig0028267:49336-49355 None:intergenic 30.0%
AAATAAGATACCCTTATTCC+GGG + tig0028267:49631-49650 None:intergenic 30.0%
GAAATAAGATACCCTTATTC+CGG + tig0028267:49632-49651 None:intergenic 30.0%
CAAACGAGGAAAAAAAGTTA+TGG + tig0028267:49664-49683 None:intergenic 30.0%
ACAATTGAAGCAACTAATTC+AGG + tig0028267:49779-49798 None:intergenic 30.0%
GAATTAGTTGCTTCAATTGT+TGG - tig0028267:49779-49798 Msa1437330:CDS 30.0%
ACATCGATAAATAACTGGTT+AGG - tig0028267:50086-50105 Msa1437330:five_prime_UTR 30.0%
TAAATAACTGGTTAGGCAAT+AGG - tig0028267:50093-50112 Msa1437330:five_prime_UTR 30.0%
GGTTTCGTTTATAGATCAAT+TGG + tig0028267:50144-50163 None:intergenic 30.0%
GTAAATTGAAGAGAAGCAGA+AGG + tig0028267:40094-40113 None:intergenic 35.0%
ATTCACAGTATCATCATCAG+CGG - tig0028267:40139-40158 Msa1437330:three_prime_UTR 35.0%
AAATGTCTCCGACGTTTAAT+CGG - tig0028267:40212-40231 Msa1437330:three_prime_UTR 35.0%
AAAGAAGGTTAACGAACCTT+GGG + tig0028267:40269-40288 None:intergenic 35.0%
TACACACTACTGTCTATATG+CGG - tig0028267:40452-40471 Msa1437330:CDS 35.0%
TGAATGTAATCACGTGTTCT+CGG - tig0028267:40649-40668 Msa1437330:intron 35.0%
AAAGGCCCTGTTTAGATAAA+CGG - tig0028267:40683-40702 Msa1437330:intron 35.0%
GGAAACATATTCGAACTAGA+AGG - tig0028267:41215-41234 Msa1437330:intron 35.0%
GTTCTATTTCAATTCGGACT+TGG - tig0028267:41369-41388 Msa1437330:intron 35.0%
TCTATTTCAATTCGGACTTG+GGG - tig0028267:41371-41390 Msa1437330:intron 35.0%
ATACTAGAGCTATATGCTCA+AGG - tig0028267:41411-41430 Msa1437330:intron 35.0%
! CTCTCTTGATTGATTTCATG+TGG - tig0028267:41694-41713 Msa1437330:intron 35.0%
CATTAACAGGGATGATGATA+AGG - tig0028267:41970-41989 Msa1437330:CDS 35.0%
TTAACAGGGATGATGATAAG+GGG - tig0028267:41972-41991 Msa1437330:CDS 35.0%
AAAACTCGACAACTTTCTAC+AGG + tig0028267:42025-42044 None:intergenic 35.0%
ATCTTCCTTGGAAGATGTTA+GGG + tig0028267:42080-42099 None:intergenic 35.0%
AACATCAGTTCCATTTCCAT+TGG + tig0028267:42125-42144 None:intergenic 35.0%
! CTGCTTCTCTTTTTCTACAT+TGG + tig0028267:42149-42168 None:intergenic 35.0%
CAATGTAGAAAAAGAGAAGC+AGG - tig0028267:42147-42166 Msa1437330:intron 35.0%
!!! ATATGACTTCCCACCTTTTT+TGG + tig0028267:42176-42195 None:intergenic 35.0%
! GCCACTTTGAAAATTATCCT+TGG - tig0028267:42196-42215 Msa1437330:intron 35.0%
! CCCAAGGATAATTTTCAAAG+TGG + tig0028267:42200-42219 None:intergenic 35.0%
TTTGAAAATTATCCTTGGGG+AGG - tig0028267:42201-42220 Msa1437330:intron 35.0%
!!! CTTTGGGTACTTTTTCATTG+GGG + tig0028267:42282-42301 None:intergenic 35.0%
AAGTACCCAAAGATAAAGTG+TGG - tig0028267:42290-42309 Msa1437330:intron 35.0%
AGTACCCAAAGATAAAGTGT+GGG - tig0028267:42291-42310 Msa1437330:intron 35.0%
TCATCCCACACTTTATCTTT+GGG + tig0028267:42298-42317 None:intergenic 35.0%
ATCATCCCACACTTTATCTT+TGG + tig0028267:42299-42318 None:intergenic 35.0%
TCAACCAGAAAGTCTTAAAC+AGG - tig0028267:42453-42472 Msa1437330:CDS 35.0%
TATGATCCCTTGACTTAAAC+TGG + tig0028267:42640-42659 None:intergenic 35.0%
TTCATCCAAGGCTAAATCAA+AGG + tig0028267:42675-42694 None:intergenic 35.0%
! TTTGCTGTAGAATTCATCCA+AGG + tig0028267:42687-42706 None:intergenic 35.0%
ACAGCAAAATTGAGAGTCAA+AGG - tig0028267:42699-42718 Msa1437330:CDS 35.0%
TAATAAGATACGCAACGATC+AGG - tig0028267:42769-42788 Msa1437330:CDS 35.0%
CAATTGTAGTAGTTTGGACA+TGG + tig0028267:42802-42821 None:intergenic 35.0%
GCTATGACATCCAAGATATT+TGG + tig0028267:42907-42926 None:intergenic 35.0%
CATATGAATACTGAAGGTTC+TGG + tig0028267:42954-42973 None:intergenic 35.0%
ACAACCATGCAAAATGAGAA+AGG - tig0028267:43479-43498 Msa1437330:intron 35.0%
! TTTGCCTTTCTCATTTTGCA+TGG + tig0028267:43486-43505 None:intergenic 35.0%
TAGACTGTAGCACATTTAGT+TGG + tig0028267:43623-43642 None:intergenic 35.0%
! TACCTCCAAACCAATTTGTT+TGG - tig0028267:43710-43729 Msa1437330:intron 35.0%
AACATCTCACATATGCTTTC+TGG - tig0028267:43883-43902 Msa1437330:intron 35.0%
CATACACCCTCCTATAATAA+TGG + tig0028267:43920-43939 None:intergenic 35.0%
TAACTACCTGATTAAGCTGT+AGG + tig0028267:44228-44247 None:intergenic 35.0%
AAGAGTAAATCTATGGTCAG+TGG - tig0028267:44325-44344 Msa1437330:intron 35.0%
GTCAGTGGTTATATCCTTAT+AGG - tig0028267:44340-44359 Msa1437330:intron 35.0%
GAAAGAAAAAAGGACAGAAG+TGG + tig0028267:44663-44682 None:intergenic 35.0%
ATTGAACATCACAGGGAATT+GGG + tig0028267:45489-45508 None:intergenic 35.0%
TATTGAACATCACAGGGAAT+TGG + tig0028267:45490-45509 None:intergenic 35.0%
GACAATCCCTAATTGACAAT+TGG + tig0028267:45558-45577 None:intergenic 35.0%
! TTAGGGATTGTCTTTCTAGT+TGG - tig0028267:45566-45585 Msa1437330:intron 35.0%
CTTGTAACTTTGTAAGGTGA+AGG + tig0028267:45688-45707 None:intergenic 35.0%
! AAAGTTACAAGCCAGTCTTT+TGG - tig0028267:45697-45716 Msa1437330:intron 35.0%
! AAGTTACAAGCCAGTCTTTT+GGG - tig0028267:45698-45717 Msa1437330:intron 35.0%
CTAATTCAATCCCAAAAGAC+TGG + tig0028267:45711-45730 None:intergenic 35.0%
!!! CAGTCTTTTGGGATTGAATT+AGG - tig0028267:45709-45728 Msa1437330:intron 35.0%
TAGTGATATGTCTTGAGTAG+TGG - tig0028267:45867-45886 Msa1437330:intron 35.0%
ATTGGATACAAAAGTCACGT+AGG + tig0028267:46073-46092 None:intergenic 35.0%
TTAAGGTGAGAAGTTCCTAT+TGG - tig0028267:46104-46123 Msa1437330:CDS 35.0%
AAGAATTCCTTTCCAGTCAA+AGG + tig0028267:46147-46166 None:intergenic 35.0%
!!! TGGTTTTTTTGTAGCTTCTG+TGG - tig0028267:46213-46232 Msa1437330:intron 35.0%
TGAAGGCAGTCATATAAACT+AGG + tig0028267:46252-46271 None:intergenic 35.0%
TTCGTTCACATATTCACTGA+AGG + tig0028267:46269-46288 None:intergenic 35.0%
! CTAACAGATCTTTTTCCACA+GGG + tig0028267:46471-46490 None:intergenic 35.0%
! ACTAACAGATCTTTTTCCAC+AGG + tig0028267:46472-46491 None:intergenic 35.0%
!! AATCAAATTGTAACGGATGC+TGG - tig0028267:46696-46715 Msa1437330:intron 35.0%
TTACCTTCTCTGTATCTTCT+TGG - tig0028267:46913-46932 Msa1437330:CDS 35.0%
ATTCCAAGAAGATACAGAGA+AGG + tig0028267:46919-46938 None:intergenic 35.0%
TCTGTATCTTCTTGGAATGT+AGG - tig0028267:46921-46940 Msa1437330:CDS 35.0%
CAAAAATTGTTACCAGTGCA+TGG - tig0028267:46968-46987 Msa1437330:CDS 35.0%
! GCAGTTTTACTAACTTGATG+AGG + tig0028267:47003-47022 None:intergenic 35.0%
TTAGTAAAACTGCTCCTACT+GGG - tig0028267:47010-47029 Msa1437330:CDS 35.0%
TTAAATGAAAGGAGGGTAAG+AGG - tig0028267:47153-47172 Msa1437330:intron 35.0%
!! ATCATCTGAAGCTGTAGTTT+TGG + tig0028267:47394-47413 None:intergenic 35.0%
GAGAAATTATCTGACTTCAG+TGG - tig0028267:47456-47475 Msa1437330:CDS 35.0%
TTATCTGACTTCAGTGGAAA+TGG - tig0028267:47462-47481 Msa1437330:CDS 35.0%
GATGCTGAAAATTTGAAGAC+CGG - tig0028267:47774-47793 Msa1437330:CDS 35.0%
! TAAGTTTTCCCTTTTGTCCA+CGG + tig0028267:47818-47837 None:intergenic 35.0%
TCACAGCCAATAATGACATT+CGG + tig0028267:47890-47909 None:intergenic 35.0%
AGAACTAAAATACCACATCG+AGG - tig0028267:48075-48094 Msa1437330:CDS 35.0%
! TTCTGGAAAACCAATCAAGA+AGG - tig0028267:48204-48223 Msa1437330:CDS 35.0%
AATGTCTCTTCCTTCTTGAT+TGG + tig0028267:48217-48236 None:intergenic 35.0%
ATTACCTGTAAATGAAGCCT+CGG - tig0028267:48234-48253 Msa1437330:intron 35.0%
AAAGGGAAAAAATCTGACAG+TGG - tig0028267:48259-48278 Msa1437330:intron 35.0%
AATCAGAACAAGATTCCCAT+TGG + tig0028267:48333-48352 None:intergenic 35.0%
! TGAACCAATTTGTTTGGATG+GGG - tig0028267:48391-48410 Msa1437330:intron 35.0%
GATGCACATAATGACTTAGA+AGG + tig0028267:48636-48655 None:intergenic 35.0%
! GCATTGACAGATAATGACTT+AGG + tig0028267:48662-48681 None:intergenic 35.0%
AACATTCACAGCGTATGAAA+GGG + tig0028267:48870-48889 None:intergenic 35.0%
AAACATTCACAGCGTATGAA+AGG + tig0028267:48871-48890 None:intergenic 35.0%
GCATTAATTGACACCTCAAT+TGG + tig0028267:48971-48990 None:intergenic 35.0%
TCATTTATCTCGGGATTGTA+AGG - tig0028267:49089-49108 Msa1437330:intron 35.0%
TGACTATGCAACAGATCATT+TGG + tig0028267:49120-49139 None:intergenic 35.0%
! AAGTTTGAAGCACTCATGTT+AGG + tig0028267:49168-49187 None:intergenic 35.0%
GCATATAAGAGAATGTCAGT+TGG + tig0028267:49297-49316 None:intergenic 35.0%
TATCGAGTGAAGATAATTCC+CGG - tig0028267:49360-49379 Msa1437330:intron 35.0%
TTTACTACGCATCAATTACG+AGG + tig0028267:49530-49549 None:intergenic 35.0%
AACTAATTCAGGATCAGTAC+AGG + tig0028267:49768-49787 None:intergenic 35.0%
! ATCTCTACAGTGTTGAAACT+TGG + tig0028267:49982-50001 None:intergenic 35.0%
TACTACTGTTAGATAGGCAA+CGG - tig0028267:50044-50063 Msa1437330:exon 35.0%
ATCGCATTCCGATTAAACGT+CGG + tig0028267:40223-40242 None:intergenic 40.0%
GGGGGTAAGATCATAAACAT+TGG + tig0028267:40249-40268 None:intergenic 40.0%
TGTTTATGATCTTACCCCCA+AGG - tig0028267:40250-40269 Msa1437330:three_prime_UTR 40.0%
AAGAAGGTTAACGAACCTTG+GGG + tig0028267:40268-40287 None:intergenic 40.0%
CAAAGAAGGTTAACGAACCT+TGG + tig0028267:40270-40289 None:intergenic 40.0%
AAGGGAGAAAAAGGCAAAGA+AGG + tig0028267:40284-40303 None:intergenic 40.0%
AATCGCTTATGCGTTTGCAA+TGG + tig0028267:40322-40341 None:intergenic 40.0%
! AGTAGTGGAATGACTGAATC+TGG - tig0028267:40385-40404 Msa1437330:CDS 40.0%
!! GTTTTGTTGCTCATGGAAAG+TGG - tig0028267:40421-40440 Msa1437330:CDS 40.0%
AGCAAGCACTTGTCATGATA+AGG - tig0028267:40724-40743 Msa1437330:intron 40.0%
GCAAGCACTTGTCATGATAA+GGG - tig0028267:40725-40744 Msa1437330:intron 40.0%
!! GCTGTTTTCACAAGCTATCT+TGG - tig0028267:40825-40844 Msa1437330:CDS 40.0%
TATTCGAACTAGAAGGCTTG+AGG - tig0028267:41222-41241 Msa1437330:intron 40.0%
CATCTTCCTTGGAAGATGTT+AGG + tig0028267:42081-42100 None:intergenic 40.0%
CTCATCATTGTCATCTTCCT+TGG + tig0028267:42092-42111 None:intergenic 40.0%
CAAGGAAGATGACAATGATG+AGG - tig0028267:42090-42109 Msa1437330:intron 40.0%
TGACAATGATGAGGCTGTTA+AGG - tig0028267:42099-42118 Msa1437330:intron 40.0%
GAGCACATGATATTAGATGC+CGG - tig0028267:42250-42269 Msa1437330:intron 40.0%
CTGTTGCAAAGTTCGAAGAT+TGG - tig0028267:42344-42363 Msa1437330:CDS 40.0%
AAAGTTCGAAGATTGGATGC+AGG - tig0028267:42351-42370 Msa1437330:CDS 40.0%
TGGATGCAGGATATCATTTC+AGG - tig0028267:42364-42383 Msa1437330:CDS 40.0%
TCAGGTGAAATAGTTCCAGA+AGG - tig0028267:42382-42401 Msa1437330:CDS 40.0%
GCAAAACAAAATGTTGGGGA+AGG - tig0028267:42417-42436 Msa1437330:CDS 40.0%
GAATATCACAAGACCATCTG+AGG + tig0028267:42554-42573 None:intergenic 40.0%
! TGAGACCTTTGATTTAGCCT+TGG - tig0028267:42667-42686 Msa1437330:CDS 40.0%
TAGTCGATACTCAATAGTGC+AGG - tig0028267:43017-43036 Msa1437330:CDS 40.0%
AAAATCGAGTGCACACTTTG+AGG - tig0028267:43081-43100 Msa1437330:CDS 40.0%
GTGAAGGAAGAAAAGAAAGC+TGG - tig0028267:43233-43252 Msa1437330:CDS 40.0%
TGTCAATTAGACCAGCTACT+GGG + tig0028267:43262-43281 None:intergenic 40.0%
TTGTCAATTAGACCAGCTAC+TGG + tig0028267:43263-43282 None:intergenic 40.0%
CGTAGAAAACCTTATCTGCA+GGG + tig0028267:43364-43383 None:intergenic 40.0%
ACGTAGAAAACCTTATCTGC+AGG + tig0028267:43365-43384 None:intergenic 40.0%
GATCTCTATGTTGAGGGATT+AGG + tig0028267:43513-43532 None:intergenic 40.0%
TACGGAGATCTCTATGTTGA+GGG + tig0028267:43519-43538 None:intergenic 40.0%
TTACGGAGATCTCTATGTTG+AGG + tig0028267:43520-43539 None:intergenic 40.0%
CATATTTCAGGAGGTTCCTA+CGG + tig0028267:43589-43608 None:intergenic 40.0%
GTAGGCCAAACAAATTGGTT+TGG + tig0028267:43718-43737 None:intergenic 40.0%
GCATATGTGAGATGTTTCTC+CGG + tig0028267:43879-43898 None:intergenic 40.0%
! AGCATTGCCTTTTACATCAC+TGG - tig0028267:43976-43995 Msa1437330:intron 40.0%
AACACAGCCAGTGATGTAAA+AGG + tig0028267:43986-44005 None:intergenic 40.0%
!! ATTTTTGTTGTGTTCCGCCT+TGG - tig0028267:44027-44046 Msa1437330:intron 40.0%
CTAATGGTATTCATCCAAGG+CGG + tig0028267:44044-44063 None:intergenic 40.0%
!! CGAAGTTGATTTAGCTCTCT+CGG - tig0028267:44090-44109 Msa1437330:intron 40.0%
GAAAAAACAGGAGAGCAAAC+AGG - tig0028267:44147-44166 Msa1437330:intron 40.0%
! TGGCTCTGTTTCATCCTATA+AGG + tig0028267:44357-44376 None:intergenic 40.0%
! GATGAAACAGAGCCAAGTTT+TGG - tig0028267:44362-44381 Msa1437330:intron 40.0%
CTTATATTCCCTGCCACAAA+CGG + tig0028267:44491-44510 None:intergenic 40.0%
CACAGATGACAAAGAATGAG+AGG + tig0028267:44582-44601 None:intergenic 40.0%
TGGAGGAAAAGAAATCTCCT+AGG + tig0028267:44643-44662 None:intergenic 40.0%
AGAAAAAAGGACAGAAGTGG+AGG + tig0028267:44660-44679 None:intergenic 40.0%
!!! TTGAGGCAACAGTTTTTTCC+TGG + tig0028267:45063-45082 None:intergenic 40.0%
TTTGCGCATATGCGAAATTG+AGG + tig0028267:45080-45099 None:intergenic 40.0%
AAATCTGTTGCAAGCCTATG+AGG - tig0028267:45590-45609 Msa1437330:intron 40.0%
!! GACTGGCTTGTAACTTTGTA+AGG + tig0028267:45694-45713 None:intergenic 40.0%
CCATCAGTTATGCAATCTCT+GGG - tig0028267:45782-45801 Msa1437330:intron 40.0%
! CACTCAAGATGTTTGGTCTT+TGG - tig0028267:45808-45827 Msa1437330:intron 40.0%
! AAGATGTTTGGTCTTTGGCT+TGG - tig0028267:45813-45832 Msa1437330:intron 40.0%
!! TCTTGAGTAGTGGATATGAG+AGG - tig0028267:45877-45896 Msa1437330:intron 40.0%
!! TCCTTTTTAGTGCCTTTGAC+TGG - tig0028267:46132-46151 Msa1437330:intron 40.0%
!! TCCAGTCAAAGGCACTAAAA+AGG + tig0028267:46136-46155 None:intergenic 40.0%
TTTAGTGCCTTTGACTGGAA+AGG - tig0028267:46137-46156 Msa1437330:intron 40.0%
CAGTGAATATGTGAACGAAG+AGG - tig0028267:46270-46289 Msa1437330:intron 40.0%
GAAACATCCTGCTTGGTTTA+GGG + tig0028267:46610-46629 None:intergenic 40.0%
TGAAACATCCTGCTTGGTTT+AGG + tig0028267:46611-46630 None:intergenic 40.0%
ATACTGTGAAACATCCTGCT+TGG + tig0028267:46617-46636 None:intergenic 40.0%
AGCAATTGTGTTAGGAAAGC+TGG + tig0028267:46888-46907 None:intergenic 40.0%
! CAATTTTTGAATCCCATGCC+TGG + tig0028267:46957-46976 None:intergenic 40.0%
AAATTGTTACCAGTGCATGG+TGG - tig0028267:46971-46990 Msa1437330:CDS 40.0%
AATTGTTACCAGTGCATGGT+GGG - tig0028267:46972-46991 Msa1437330:CDS 40.0%
GTTAGTAAAACTGCTCCTAC+TGG - tig0028267:47009-47028 Msa1437330:CDS 40.0%
TAGTAAAACTGCTCCTACTG+GGG - tig0028267:47011-47030 Msa1437330:CDS 40.0%
AAACCCATAATAAGAGGGTG+TGG + tig0028267:47090-47109 None:intergenic 40.0%
! CACCCTCTTATTATGGGTTT+TGG - tig0028267:47090-47109 Msa1437330:CDS 40.0%
GGCCAAAACCCATAATAAGA+GGG + tig0028267:47095-47114 None:intergenic 40.0%
AGGCCAAAACCCATAATAAG+AGG + tig0028267:47096-47115 None:intergenic 40.0%
! GATGATAATGTTGCTGATGG+AGG - tig0028267:47192-47211 Msa1437330:intron 40.0%
TCTGAGAAGAATGTTGCTGA+TGG - tig0028267:47258-47277 Msa1437330:intron 40.0%
AGACACCTCTCAAACTAGTT+TGG - tig0028267:47356-47375 Msa1437330:intron 40.0%
AAGAATTTCCTCAAGCTGAG+GGG + tig0028267:47502-47521 None:intergenic 40.0%
CAAGAATTTCCTCAAGCTGA+GGG + tig0028267:47503-47522 None:intergenic 40.0%
TCAAGAATTTCCTCAAGCTG+AGG + tig0028267:47504-47523 None:intergenic 40.0%
GAAATTCTTGATCGAGCTCT+GGG - tig0028267:47513-47532 Msa1437330:CDS 40.0%
!!! GCTGATTTTTTTACCACCAC+CGG + tig0028267:47796-47815 None:intergenic 40.0%
AAAAATCAGCCGTGGACAAA+AGG - tig0028267:47806-47825 Msa1437330:CDS 40.0%
AAAATCAGCCGTGGACAAAA+GGG - tig0028267:47807-47826 Msa1437330:CDS 40.0%
GAGCATCCGAATGTCATTAT+TGG - tig0028267:47881-47900 Msa1437330:CDS 40.0%
TCTATGGAACTCATCTTAGC+AGG + tig0028267:47993-48012 None:intergenic 40.0%
GGTGTGTATTTGTAGTCTTC+TGG - tig0028267:48187-48206 Msa1437330:CDS 40.0%
TAAATGAAGCCTCGGACAAA+GGG - tig0028267:48242-48261 Msa1437330:intron 40.0%
!!! AGATTTTTTCCCTTTGTCCG+AGG + tig0028267:48254-48273 None:intergenic 40.0%
AACTCGGTATAGTAGGTTCA+TGG - tig0028267:48477-48496 Msa1437330:intron 40.0%
AAAGGGAAATGAACCAAGCT+TGG + tig0028267:48853-48872 None:intergenic 40.0%
!! CATATTTTCGGAGCATCTAC+AGG + tig0028267:49048-49067 None:intergenic 40.0%
TGTTACAAGTGTAAGAGGGT+AGG - tig0028267:49066-49085 Msa1437330:intron 40.0%
AGAGGGTAGGTCATTTATCT+CGG - tig0028267:49079-49098 Msa1437330:intron 40.0%
! AGGATTTTCTTCAGCTTCAC+TGG + tig0028267:49148-49167 None:intergenic 40.0%
CTTGTCCTTAGAAGATAGAG+TGG - tig0028267:49185-49204 Msa1437330:intron 40.0%
CATTGCCACTCTATCTTCTA+AGG + tig0028267:49193-49212 None:intergenic 40.0%
CTTAGAAGATAGAGTGGCAA+TGG - tig0028267:49191-49210 Msa1437330:intron 40.0%
TTATATGCTGTTCCCGTATG+TGG - tig0028267:49309-49328 Msa1437330:intron 40.0%
TGCATTGTATGGACCACATA+CGG + tig0028267:49325-49344 None:intergenic 40.0%
TTATGTTATGACCAAGTCGC+AGG - tig0028267:49464-49483 Msa1437330:intron 40.0%
TTCTATGATTTCCTGCGACT+TGG + tig0028267:49478-49497 None:intergenic 40.0%
CAATTACGAGGAGCAAAAAG+TGG + tig0028267:49518-49537 None:intergenic 40.0%
TTTATGCAGCAACAGATTCC+CGG - tig0028267:49610-49629 Msa1437330:intron 40.0%
!! GATTTGTTGCTTCTGACATG+TGG + tig0028267:49724-49743 None:intergenic 40.0%
AGAAGCAACAAATCGTGAGA+AGG - tig0028267:49730-49749 Msa1437330:intron 40.0%
AATGTGAAGATAACTGCAGC+TGG - tig0028267:49803-49822 Msa1437330:CDS 40.0%
AAAAAGAGCAGTGCCAAACA+AGG - tig0028267:49860-49879 Msa1437330:intron 40.0%
AAAAGAGCAGTGCCAAACAA+GGG - tig0028267:49861-49880 Msa1437330:intron 40.0%
TCTTGACTAACTCCCTTGTT+TGG + tig0028267:49876-49895 None:intergenic 40.0%
AGTTAGTCAAGACCCTTTGT+GGG - tig0028267:49884-49903 Msa1437330:intron 40.0%
CACCAAGTAAATCCCACAAA+GGG + tig0028267:49899-49918 None:intergenic 40.0%
! CTACAGTGTTGAAACTTGGA+AGG + tig0028267:49978-49997 None:intergenic 40.0%
!!! GTTTTTTCCGTTACCCCTAA+TGG - tig0028267:50005-50024 Msa1437330:CDS 40.0%
GGTGAGTACTACTGTTAGAT+AGG - tig0028267:50038-50057 Msa1437330:CDS 40.0%
AGGCAACGGCTGAAATTATA+TGG - tig0028267:50058-50077 Msa1437330:five_prime_UTR 40.0%
GGTGAAGGTTCGTATGAACA+CGG - tig0028267:40169-40188 Msa1437330:three_prime_UTR 45.0%
ACGTCGGAGACATTTCACTT+CGG + tig0028267:40207-40226 None:intergenic 45.0%
AGAAGGTTAACGAACCTTGG+GGG + tig0028267:40267-40286 None:intergenic 45.0%
!!! CGAGAAGGTTTTGTTGCTCA+TGG - tig0028267:40414-40433 Msa1437330:CDS 45.0%
!! CACAACACTTTAGCTCTGCA+TGG + tig0028267:41089-41108 None:intergenic 45.0%
GACAAAAGCAACACTCCTTC+TGG - tig0028267:41175-41194 Msa1437330:intron 45.0%
TTGAGGATGTGCGACAACTT+GGG - tig0028267:41239-41258 Msa1437330:intron 45.0%
TGCGACAACTTGGGTATGAT+CGG - tig0028267:41248-41267 Msa1437330:intron 45.0%
CAGTGAAACTAGAATCCGTG+AGG + tig0028267:41446-41465 None:intergenic 45.0%
TGACTCTACTTCGTTCTCAC+AGG - tig0028267:41469-41488 Msa1437330:intron 45.0%
TCATGTCCAATCGAGCTAGT+TGG - tig0028267:41748-41767 Msa1437330:intron 45.0%
GCTGTTAAGGCCAATGGAAA+TGG - tig0028267:42112-42131 Msa1437330:intron 45.0%
GAGAAGCAGGGATCCAAAAA+AGG - tig0028267:42160-42179 Msa1437330:intron 45.0%
AAGCAGGGATCCAAAAAAGG+TGG - tig0028267:42163-42182 Msa1437330:intron 45.0%
AGCAGGGATCCAAAAAAGGT+GGG - tig0028267:42164-42183 Msa1437330:intron 45.0%
CTTCGAACTTTGCAACAGCT+TGG + tig0028267:42342-42361 None:intergenic 45.0%
CTGAAGAGCTGAGTTCTCTT+TGG + tig0028267:42744-42763 None:intergenic 45.0%
AAGATACGCAACGATCAGGT+TGG - tig0028267:42773-42792 Msa1437330:CDS 45.0%
TGTTCGTGTATCTCTTGCCA+AGG - tig0028267:43181-43200 Msa1437330:CDS 45.0%
GTTCGTGTATCTCTTGCCAA+GGG - tig0028267:43182-43201 Msa1437330:CDS 45.0%
! TCTTGCCAAGGGTATGAGTT+GGG - tig0028267:43193-43212 Msa1437330:CDS 45.0%
GAGCAACAATCTCGACGAAA+TGG - tig0028267:43319-43338 Msa1437330:intron 45.0%
TACGGCACAACACTTGATCT+GGG + tig0028267:43571-43590 None:intergenic 45.0%
!! GGCCAAACAAATTGGTTTGG+AGG + tig0028267:43715-43734 None:intergenic 45.0%
ACTGCTTGACTTTCCGTTTG+TGG - tig0028267:44475-44494 Msa1437330:intron 45.0%
TTGACTTTCCGTTTGTGGCA+GGG - tig0028267:44480-44499 Msa1437330:intron 45.0%
AGGGAATTGGGATCTTGAAC+AGG + tig0028267:45477-45496 None:intergenic 45.0%
TGCAAGCCTATGAGGAAAAG+AGG - tig0028267:45598-45617 Msa1437330:intron 45.0%
GCAAGCCTATGAGGAAAAGA+GGG - tig0028267:45599-45618 Msa1437330:intron 45.0%
CAAGCCTATGAGGAAAAGAG+GGG - tig0028267:45600-45619 Msa1437330:intron 45.0%
! ACATCCCCTCTTTTCCTCAT+AGG + tig0028267:45607-45626 None:intergenic 45.0%
GCCATCAGTTATGCAATCTC+TGG - tig0028267:45781-45800 Msa1437330:intron 45.0%
CCCAGAGATTGCATAACTGA+TGG + tig0028267:45785-45804 None:intergenic 45.0%
TGGGTCACACTCAAGATGTT+TGG - tig0028267:45801-45820 Msa1437330:intron 45.0%
!! GGGTGTTGAGAGTCTCATAT+TGG - tig0028267:45843-45862 Msa1437330:intron 45.0%
GGGTTAAACACAAACCCACA+AGG + tig0028267:45912-45931 None:intergenic 45.0%
CCATGCTTAGCTAAAGGATC+AGG + tig0028267:46005-46024 None:intergenic 45.0%
CCTGATCCTTTAGCTAAGCA+TGG - tig0028267:46002-46021 Msa1437330:CDS 45.0%
AGGATGCCATGCTTAGCTAA+AGG + tig0028267:46011-46030 None:intergenic 45.0%
CATATCACATGACACCACGA+AGG + tig0028267:46031-46050 None:intergenic 45.0%
! GTGAGAAGTTCCTATTGGCT+GGG - tig0028267:46109-46128 Msa1437330:CDS 45.0%
CTAAAAAGGACCCAGCCAAT+AGG + tig0028267:46122-46141 None:intergenic 45.0%
TTTATAAATGCGCCACCCTG+TGG - tig0028267:46453-46472 Msa1437330:intron 45.0%
! ACAGATCTTTTTCCACAGGG+TGG + tig0028267:46468-46487 None:intergenic 45.0%
TATGTGCATGCTGAACTGCA+TGG - tig0028267:46528-46547 Msa1437330:intron 45.0%
ACTGTCAGATATTCCCCAGT+AGG + tig0028267:47027-47046 None:intergenic 45.0%
ACTGGGGAATATCTGACAGT+AGG - tig0028267:47027-47046 Msa1437330:CDS 45.0%
CTGGGGAATATCTGACAGTA+GGG - tig0028267:47028-47047 Msa1437330:CDS 45.0%
GTAGGGAGTTTCATGATACG+AGG - tig0028267:47045-47064 Msa1437330:CDS 45.0%
TCCACCACACCCTCTTATTA+TGG - tig0028267:47083-47102 Msa1437330:CDS 45.0%
CCACCACACCCTCTTATTAT+GGG - tig0028267:47084-47103 Msa1437330:CDS 45.0%
!!! TTTTGGCCTGCTATTTCGCT+TGG - tig0028267:47107-47126 Msa1437330:CDS 45.0%
TCTCATCCAAGCGAAATAGC+AGG + tig0028267:47116-47135 None:intergenic 45.0%
TCGCTTGGATGAGAGTTCAT+TGG - tig0028267:47122-47141 Msa1437330:CDS 45.0%
CGCTTGGATGAGAGTTCATT+GGG - tig0028267:47123-47142 Msa1437330:CDS 45.0%
TAATGTTGCTGATGGAGGAG+AGG - tig0028267:47197-47216 Msa1437330:intron 45.0%
! AAGCAAGTCTTCTGAGGGTA+TGG + tig0028267:47334-47353 None:intergenic 45.0%
TCTGCAAGCAAGTCTTCTGA+GGG + tig0028267:47339-47358 None:intergenic 45.0%
! TGCAGCCAAACTAGTTTGAG+AGG + tig0028267:47364-47383 None:intergenic 45.0%
GGAAATTCTTGATCGAGCTC+TGG - tig0028267:47512-47531 Msa1437330:CDS 45.0%
AACCAAGCAAACCTGCAGTA+AGG - tig0028267:47616-47635 Msa1437330:intron 45.0%
ACCAAGCAAACCTGCAGTAA+GGG - tig0028267:47617-47636 Msa1437330:intron 45.0%
TACGGTTTATCCCTTACTGC+AGG + tig0028267:47630-47649 None:intergenic 45.0%
GGATGTGCTTCTCCATGTTT+CGG + tig0028267:47690-47709 None:intergenic 45.0%
GCTGAAAATTTGAAGACCGG+TGG - tig0028267:47777-47796 Msa1437330:CDS 45.0%
GAAAATTTGAAGACCGGTGG+TGG - tig0028267:47780-47799 Msa1437330:CDS 45.0%
GGTGGTAAAAAAATCAGCCG+TGG - tig0028267:47798-47817 Msa1437330:CDS 45.0%
TGCTGAGAATATCCTCGATG+TGG + tig0028267:48090-48109 None:intergenic 45.0%
TTGTCCGAGGCTTCATTTAC+AGG + tig0028267:48241-48260 None:intergenic 45.0%
GTAAATGAAGCCTCGGACAA+AGG - tig0028267:48241-48260 Msa1437330:intron 45.0%
CAGCACATTGTCAGCAATAC+TGG + tig0028267:48308-48327 None:intergenic 45.0%
TGACAATGTGCTGAGCCAAT+GGG - tig0028267:48315-48334 Msa1437330:intron 45.0%
CAAGCCCCATCCAAACAAAT+TGG + tig0028267:48398-48417 None:intergenic 45.0%
! CAATTTGTTTGGATGGGGCT+TGG - tig0028267:48396-48415 Msa1437330:intron 45.0%
GCTCACAAACTCGGTATAGT+AGG - tig0028267:48470-48489 Msa1437330:intron 45.0%
! AGTTGAGTTGTGACCAAGCT+TGG - tig0028267:48837-48856 Msa1437330:CDS 45.0%
GAGGGTAGGTCATTTATCTC+GGG - tig0028267:49080-49099 Msa1437330:intron 45.0%
AAGAGAATGTCAGTTGGGAG+TGG + tig0028267:49291-49310 None:intergenic 45.0%
GCATTGTATGGACCACATAC+GGG + tig0028267:49324-49343 None:intergenic 45.0%
TTTCCCTTTCTTCACAGGTC+CGG + tig0028267:49382-49401 None:intergenic 45.0%
AGACCTTTCCCTTTCTTCAC+AGG + tig0028267:49387-49406 None:intergenic 45.0%
AGCAACAGATTCCCGGAATA+AGG - tig0028267:49617-49636 Msa1437330:intron 45.0%
GCAACAGATTCCCGGAATAA+GGG - tig0028267:49618-49637 Msa1437330:intron 45.0%
TGCAGCTGTACAATCAAACG+AGG + tig0028267:49678-49697 None:intergenic 45.0%
CTTCTGACATGTGGCTGAAT+AGG + tig0028267:49715-49734 None:intergenic 45.0%
GAGTTAGTCAAGACCCTTTG+TGG - tig0028267:49883-49902 Msa1437330:intron 45.0%
GACCCTTTGTGGGATTTACT+TGG - tig0028267:49894-49913 Msa1437330:intron 45.0%
CCACCAAGTAAATCCCACAA+AGG + tig0028267:49900-49919 None:intergenic 45.0%
CCTTTGTGGGATTTACTTGG+TGG - tig0028267:49897-49916 Msa1437330:intron 45.0%
CAGAGATCCATTAGGGGTAA+CGG + tig0028267:50015-50034 None:intergenic 45.0%
! TACCCCTAATGGATCTCTGT+TGG - tig0028267:50016-50035 Msa1437330:CDS 45.0%
! ACCCCTAATGGATCTCTGTT+GGG - tig0028267:50017-50036 Msa1437330:CDS 45.0%
ACCCAACAGAGATCCATTAG+GGG + tig0028267:50021-50040 None:intergenic 45.0%
CACCCAACAGAGATCCATTA+GGG + tig0028267:50022-50041 None:intergenic 45.0%
TCACCCAACAGAGATCCATT+AGG + tig0028267:50023-50042 None:intergenic 45.0%
!! ATCATATAATTATATTATAA+TGG + tig0028267:43815-43834 None:intergenic 5.0%
GAAGGTTCGTATGAACACGG+CGG - tig0028267:40172-40191 Msa1437330:three_prime_UTR 50.0%
TCGGAGACATTTCACTTCGG+CGG + tig0028267:40204-40223 None:intergenic 50.0%
TGAATCTGGTGAGAGCGAGA+AGG - tig0028267:40399-40418 Msa1437330:CDS 50.0%
CTTGAGGATGTGCGACAACT+TGG - tig0028267:41238-41257 Msa1437330:intron 50.0%
GCGACAACTTGGGTATGATC+GGG - tig0028267:41249-41268 Msa1437330:intron 50.0%
TCAAGGCAACGTCATCCTCA+CGG - tig0028267:41428-41447 Msa1437330:intron 50.0%
TCCAATCGAGCTAGTTGGCT+TGG - tig0028267:41753-41772 Msa1437330:intron 50.0%
GACAGCCCTAACATCTTCCA+AGG - tig0028267:42072-42091 Msa1437330:intron 50.0%
GATGAGGCTGTTAAGGCCAA+TGG - tig0028267:42106-42125 Msa1437330:intron 50.0%
!! ATTATCCTTGGGGAGGCACT+CGG - tig0028267:42208-42227 Msa1437330:intron 50.0%
ATCATGTGCTCAGACAGTGC+AGG + tig0028267:42241-42260 None:intergenic 50.0%
TGATGCCACTGTTCAGGCTT+TGG - tig0028267:42315-42334 Msa1437330:intron 50.0%
TTGGACCAAAGCCTGAACAG+TGG + tig0028267:42323-42342 None:intergenic 50.0%
! CTCTTGCCAAGGGTATGAGT+TGG - tig0028267:43192-43211 Msa1437330:CDS 50.0%
GTCATCCCAACTCATACCCT+TGG + tig0028267:43201-43220 None:intergenic 50.0%
! TGAGTTGGGATGACCTTGCT+CGG - tig0028267:43207-43226 Msa1437330:CDS 50.0%
AAAGCTGGAAACCCAGTAGC+TGG - tig0028267:43248-43267 Msa1437330:CDS 50.0%
GAAGACACTCCCTGCAGATA+AGG - tig0028267:43352-43371 Msa1437330:intron 50.0%
ACGGCACAACACTTGATCTG+GGG + tig0028267:43570-43589 None:intergenic 50.0%
CTACGGCACAACACTTGATC+TGG + tig0028267:43572-43591 None:intergenic 50.0%
! CAGATCAAGTGTTGTGCCGT+AGG - tig0028267:43570-43589 Msa1437330:intron 50.0%
TTCATACCACCTCCGAGCAT+TGG + tig0028267:44122-44141 None:intergenic 50.0%
GACTCGCCTACAGCTTAATC+AGG - tig0028267:44219-44238 Msa1437330:intron 50.0%
CTTGACTTTCCGTTTGTGGC+AGG - tig0028267:44479-44498 Msa1437330:intron 50.0%
CGCATATGCGCAAAGTTCAC+TGG - tig0028267:45086-45105 Msa1437330:CDS 50.0%
TGAGGAAAAGAGGGGATGTC+AGG - tig0028267:45608-45627 Msa1437330:intron 50.0%
AAAGAGGGGATGTCAGGTCA+TGG - tig0028267:45614-45633 Msa1437330:intron 50.0%
!! TTGGTCTTTGGCTTGGCATG+AGG - tig0028267:45820-45839 Msa1437330:intron 50.0%
!! TGGTCTTTGGCTTGGCATGA+GGG - tig0028267:45821-45840 Msa1437330:intron 50.0%
AGAGGCAACTCTCACCTTGT+GGG - tig0028267:45895-45914 Msa1437330:intron 50.0%
GGTGAGAAGTTCCTATTGGC+TGG - tig0028267:46108-46127 Msa1437330:CDS 50.0%
AGGAAAGCTGGTCCATGCAA+TGG + tig0028267:46876-46895 None:intergenic 50.0%
AATGTAGGTCTGCCATAGCC+AGG - tig0028267:46936-46955 Msa1437330:CDS 50.0%
TTGAATCCCATGCCTGGCTA+TGG + tig0028267:46951-46970 None:intergenic 50.0%
AGGATAAACCCACCATGCAC+TGG + tig0028267:46983-47002 None:intergenic 50.0%
! CCCATAATAAGAGGGTGTGG+TGG + tig0028267:47087-47106 None:intergenic 50.0%
TGAAAGGAGGGTAAGAGGAG+AGG - tig0028267:47158-47177 Msa1437330:intron 50.0%
TGGAGAAACTGCTGCAGACT+CGG - tig0028267:47278-47297 Msa1437330:intron 50.0%
AAACTGCTGCAGACTCGGAA+AGG - tig0028267:47283-47302 Msa1437330:intron 50.0%
GTCTGCAAGCAAGTCTTCTG+AGG + tig0028267:47340-47359 None:intergenic 50.0%
! TCCCTTACTGCAGGTTTGCT+TGG + tig0028267:47621-47640 None:intergenic 50.0%
TCCAAGCGATGGACATGGAA+AGG - tig0028267:47707-47726 Msa1437330:intron 50.0%
TCCTTTCCATGTCCATCGCT+TGG + tig0028267:47711-47730 None:intergenic 50.0%
GAAGTATGCTGACCAAGACG+AGG - tig0028267:47851-47870 Msa1437330:CDS 50.0%
CTGACCAAGACGAGGAAGAA+AGG - tig0028267:47859-47878 Msa1437330:CDS 50.0%
TGCTCCTTTCTTCCTCGTCT+TGG + tig0028267:47866-47885 None:intergenic 50.0%
CTGACAATGTGCTGAGCCAA+TGG - tig0028267:48314-48333 Msa1437330:intron 50.0%
GCTGAGCTAGCTCACAAACT+CGG - tig0028267:48461-48480 Msa1437330:intron 50.0%
ATTCCCGGACCTGTGAAGAA+AGG - tig0028267:49375-49394 Msa1437330:intron 50.0%
TTCCCGGACCTGTGAAGAAA+GGG - tig0028267:49376-49395 Msa1437330:intron 50.0%
TTCCCTTTCTTCACAGGTCC+GGG + tig0028267:49381-49400 None:intergenic 50.0%
GGACCTGTGAAGAAAGGGAA+AGG - tig0028267:49381-49400 Msa1437330:intron 50.0%
ATCATCATCAGCGGCAGCGA+TGG - tig0028267:40148-40167 Msa1437330:three_prime_UTR 55.0%
TCGTATGAACACGGCGGATG+TGG - tig0028267:40178-40197 Msa1437330:three_prime_UTR 55.0%
GCCAAGCCAACTAGCTCGAT+TGG + tig0028267:41757-41776 None:intergenic 55.0%
GTGGGATGATGCCACTGTTC+AGG - tig0028267:42309-42328 Msa1437330:intron 55.0%
TTGGGATGACCTTGCTCGGA+TGG - tig0028267:43211-43230 Msa1437330:CDS 55.0%
TGACCTTGCTCGGATGGTGA+AGG - tig0028267:43217-43236 Msa1437330:CDS 55.0%
CTTCCTTCACCATCCGAGCA+AGG + tig0028267:43223-43242 None:intergenic 55.0%
TCTCGGCACATGCCAATGCT+CGG - tig0028267:44107-44126 Msa1437330:intron 55.0%
AGGGGATGTCAGGTCATGGA+AGG - tig0028267:45618-45637 Msa1437330:intron 55.0%
GGGGATGTCAGGTCATGGAA+GGG - tig0028267:45619-45638 Msa1437330:intron 55.0%
GGGATGTCAGGTCATGGAAG+GGG - tig0028267:45620-45639 Msa1437330:intron 55.0%
TGTCAGGTCATGGAAGGGGA+AGG - tig0028267:45624-45643 Msa1437330:intron 55.0%
!! GGTCTTTGGCTTGGCATGAG+GGG - tig0028267:45822-45841 Msa1437330:intron 55.0%
!! GTCTTTGGCTTGGCATGAGG+GGG - tig0028267:45823-45842 Msa1437330:intron 55.0%
GAGAGGCAACTCTCACCTTG+TGG - tig0028267:45894-45913 Msa1437330:intron 55.0%
GCTAAGCATGGCATCCTTCG+TGG - tig0028267:46014-46033 Msa1437330:CDS 55.0%
! TTTAGGGTCAGCGGTGGAAC+TGG + tig0028267:46594-46613 None:intergenic 55.0%
! CCTGCTTGGTTTAGGGTCAG+CGG + tig0028267:46603-46622 None:intergenic 55.0%
AAGGAGGGTAAGAGGAGAGG+AGG - tig0028267:47161-47180 Msa1437330:intron 55.0%
TGTTGCTGATGGAGGAGAGG+AGG - tig0028267:47200-47219 Msa1437330:intron 55.0%
GATGGAGGAGAGGAGGAAAC+TGG - tig0028267:47207-47226 Msa1437330:intron 55.0%
GCTGCAGACTCGGAAAGGAA+TGG - tig0028267:47288-47307 Msa1437330:intron 55.0%
ATCTGTCTCCCCTCAGCTTG+AGG - tig0028267:47491-47510 Msa1437330:CDS 55.0%
!! CTTGATCGAGCTCTGGGACT+TGG - tig0028267:47519-47538 Msa1437330:CDS 55.0%
! GGAGAAGCACATCCAAGCGA+TGG - tig0028267:47696-47715 Msa1437330:intron 55.0%
GCACATCCAAGCGATGGACA+TGG - tig0028267:47702-47721 Msa1437330:intron 55.0%
ATCAGCGGCAGCGATGGTGA+AGG - tig0028267:40154-40173 Msa1437330:three_prime_UTR 60.0%
CATAACCGAGTGCCTCCCCA+AGG + tig0028267:42216-42235 None:intergenic 60.0%
!! CTTGGGGAGGCACTCGGTTA+TGG - tig0028267:42214-42233 Msa1437330:intron 60.0%
CACATGCCAATGCTCGGAGG+TGG - tig0028267:44113-44132 Msa1437330:intron 60.0%
AGCGGTGGAACTGGCTGCAA+AGG + tig0028267:46585-46604 None:intergenic 60.0%
! GCTTGGTTTAGGGTCAGCGG+TGG + tig0028267:46600-46619 None:intergenic 60.0%
CCGCTGACCCTAAACCAAGC+AGG - tig0028267:46600-46619 Msa1437330:intron 60.0%
AGGTCTGCCATAGCCAGGCA+TGG - tig0028267:46941-46960 Msa1437330:CDS 60.0%
GGTCTGCCATAGCCAGGCAT+GGG - tig0028267:46942-46961 Msa1437330:CDS 60.0%
CGGCACATGCCAATGCTCGG+AGG - tig0028267:44110-44129 Msa1437330:intron 65.0%
Chromosome Type Strat End Strand Name
tig0028267 gene 40059 50165 40059 ID=Msa1437330;Name=Msa1437330
tig0028267 mRNA 40059 50165 40059 ID=Msa1437330-mRNA-1;Parent=Msa1437330;Name=Msa1437330-mRNA-1;_AED=0.01;_eAED=0.01;_QI=108|1|1|1|1|1|14|276|1142
tig0028267 exon 40059 40531 40059 ID=Msa1437330-mRNA-1:exon:10628;Parent=Msa1437330-mRNA-1
tig0028267 exon 40822 41181 40822 ID=Msa1437330-mRNA-1:exon:10627;Parent=Msa1437330-mRNA-1
tig0028267 exon 41944 42022 41944 ID=Msa1437330-mRNA-1:exon:10626;Parent=Msa1437330-mRNA-1
tig0028267 exon 42319 43281 42319 ID=Msa1437330-mRNA-1:exon:10625;Parent=Msa1437330-mRNA-1
tig0028267 exon 43592 43697 43592 ID=Msa1437330-mRNA-1:exon:10624;Parent=Msa1437330-mRNA-1
tig0028267 exon 45006 45160 45006 ID=Msa1437330-mRNA-1:exon:10623;Parent=Msa1437330-mRNA-1
tig0028267 exon 45984 46136 45984 ID=Msa1437330-mRNA-1:exon:10622;Parent=Msa1437330-mRNA-1
tig0028267 exon 46851 47144 46851 ID=Msa1437330-mRNA-1:exon:10621;Parent=Msa1437330-mRNA-1
tig0028267 exon 47434 47619 47434 ID=Msa1437330-mRNA-1:exon:10620;Parent=Msa1437330-mRNA-1
tig0028267 exon 47750 48245 47750 ID=Msa1437330-mRNA-1:exon:10619;Parent=Msa1437330-mRNA-1
tig0028267 exon 48734 48858 48734 ID=Msa1437330-mRNA-1:exon:10618;Parent=Msa1437330-mRNA-1
tig0028267 exon 48954 49050 48954 ID=Msa1437330-mRNA-1:exon:10617;Parent=Msa1437330-mRNA-1
tig0028267 exon 49751 49863 49751 ID=Msa1437330-mRNA-1:exon:10616;Parent=Msa1437330-mRNA-1
tig0028267 exon 49953 50165 49953 ID=Msa1437330-mRNA-1:exon:10615;Parent=Msa1437330-mRNA-1
tig0028267 five_prime_UTR 50058 50165 50058 ID=Msa1437330-mRNA-1:five_prime_utr;Parent=Msa1437330-mRNA-1
tig0028267 CDS 49953 50057 49953 ID=Msa1437330-mRNA-1:cds;Parent=Msa1437330-mRNA-1
tig0028267 CDS 49751 49863 49751 ID=Msa1437330-mRNA-1:cds;Parent=Msa1437330-mRNA-1
tig0028267 CDS 48954 49050 48954 ID=Msa1437330-mRNA-1:cds;Parent=Msa1437330-mRNA-1
tig0028267 CDS 48734 48858 48734 ID=Msa1437330-mRNA-1:cds;Parent=Msa1437330-mRNA-1
tig0028267 CDS 47750 48245 47750 ID=Msa1437330-mRNA-1:cds;Parent=Msa1437330-mRNA-1
tig0028267 CDS 47434 47619 47434 ID=Msa1437330-mRNA-1:cds;Parent=Msa1437330-mRNA-1
tig0028267 CDS 46851 47144 46851 ID=Msa1437330-mRNA-1:cds;Parent=Msa1437330-mRNA-1
tig0028267 CDS 45984 46136 45984 ID=Msa1437330-mRNA-1:cds;Parent=Msa1437330-mRNA-1
tig0028267 CDS 45006 45160 45006 ID=Msa1437330-mRNA-1:cds;Parent=Msa1437330-mRNA-1
tig0028267 CDS 43592 43697 43592 ID=Msa1437330-mRNA-1:cds;Parent=Msa1437330-mRNA-1
tig0028267 CDS 42319 43281 42319 ID=Msa1437330-mRNA-1:cds;Parent=Msa1437330-mRNA-1
tig0028267 CDS 41944 42022 41944 ID=Msa1437330-mRNA-1:cds;Parent=Msa1437330-mRNA-1
tig0028267 CDS 40822 41181 40822 ID=Msa1437330-mRNA-1:cds;Parent=Msa1437330-mRNA-1
tig0028267 CDS 40335 40531 40335 ID=Msa1437330-mRNA-1:cds;Parent=Msa1437330-mRNA-1
tig0028267 three_prime_UTR 40059 40334 40059 ID=Msa1437330-mRNA-1:three_prime_utr;Parent=Msa1437330-mRNA-1
Gene Sequence

>Msa1437330

ATGGTGAAGGTTCGTATGAACACGGCGGATGTGGCCGCCGAAGTGAAATGTCTCCGACGTTTAATCGGAATGCGATGTTCCAATGTTTATGATCTTACCCCCAAGACGTACGTTTTCAAGCTTATGAATAGTAGTGGAATGACTGAATCTGGTGAGAGCGAGAAGGTTTTGTTGCTCATGGAAAGTGGTGCTCGATTACACACTACTGTCTATATGCGTGACAAAAGCAACACTCCTTCTGGTTTTACACTTAAATTGAGGAAACATATTCGAACTAGAAGGCTTGAGGATGTGCGACAACTTGGGTATGATCGGATTGTTCTATTTCAATTCGGACTTGGGGAGAATGCATACTATGTTATACTAGAGCTATATGCTCAAGGCAACGTCATCCTCACGGATTCTAGTTTCACTGTCTTGACTCTACTTCGTTCTCACAGGGATGATGATAAGGGGCTTGCAATCATGTCACGACATCGTTATCCTGTAGAAAGTTGTCGAGTTTTTGAGCGAACAACTACAACAAAGCTGCAGACAGCCCTAACATCTTCCAAGGAAGATGACAATGATGAGGCTGTTAAGGCCAATGGAAATGGAACTGATGTTTCCAATGTAGAAAAAGAGAAGCAGGGATCCAAAAAAGGTGGGAAGTCATATGCCACTTTGAAAATTATCCTTGGGGAGGCACTCGGTTATGGACCTGCACTGTCTGAGCACATGATATTAGATGCCGGTTTAATCCCCAATGAAAAAGTACCCAAAGATAAAGTGTGGGATGATGCCACTGTTCAGGCTTTGGTCCAAGCTGTTGCAAAGTTCGAAGATTGGATGCAGGATATCATTTCAGGTGAAATAGTTCCAGAAGGATATATTTTGATGCAAAACAAAATGTTGGGGAAGGATTCTTCTGTATCTCAACCAGAAAGTCTTAAACAGATCTATGATGAGTTCTGCCCCATCTTACTTAACCAGTTTAAGTCAAGGGATCATACAAAGTTTGAGACCTTTGATTTAGCCTTGGATGAATTCTACAGCAAAATTGAGAGTCAAAGGTCTGAACAACAGCACAAAGCCAAAGAGAACTCAGCTCTTCAGAAACTTAATAAGATACGCAACGATCAGGAAAATCGAGTGCACACTTTGAGGAAAGAAGCTGATAACTGTATTAAAATGGCAGAATTGATAGAATATAACTTGGAAGATGTAGATGCTGCTATATTAGCTGTTCGTGTATCTCTTGCCAAGGGTATGAGTTGGGATGACCTTGCTCGGATGGTGAAGGAAGAAAAGAAAGCTGGAAACCCAGTAGCTGGTCTAATTGACAAGCTTCATCTTGAAAGAAATTGCATGACTTTACTGTTGAGCAACAATCTCGACGAAATGGATGATGATGAGAAGACACTCCCTGCAGATAAGGTCGAAGTTGATTTAGCTCTCTCGGCACATGCCAATGCTCGGAGGTGGTATGAACTGAAGAAAAAACAGGAGAGCAAACAGGAAAAGACTATAACTGCCCATGAAAAAGCTTTTAAAGCTGCGGAGAGAAAGACTCGCCTACAGCTTAATCAGGAAAAAACTGTTGCCTCAATTTCGCATATGCGCAAAGTTCACTGGTTTGAGAAATTTAATTGGTTCATTAGCAGTGAGAATTATTTGGTTATCAGTGGACGTGATGCCCAGCAAAATGAGATGATAGTAAAGCGTTATATGTCTAAAGGAGATCTGTATGTGCATGCTGAACTGCATGGAGCTTCTAGTACAGTTATCAAGAATCACAAACCTTTGCAGCCAGTTCCACCGCTGACCCTAAACCAAGCAGGATGTTTCACAGTCTGCCATAGCCAGGCATGGGATTCAAAAATTGTTACCAGTGCATGGTGGGTTTATCCTCATCAAGTTAGTAAAACTGCTCCTACTGGGGAATATCTGACAGTAGGGAGTTTCATGATACGAGGAAAGAAAAATTATCTTCCACCACACCCTCTTATTATGGGTTTTGGCCTGCTATTTCGCTTGGATGAGAGTTCATTGGGATCACATTTAAATGAAAGGAGGGTAAGAGGAGAGGAGGAAACAATAGATGATAATGTTGCTGATGGAGGAGAGGAGGAAACTGGCCCTGTTGAAGAACAATTTGATTCAGAGTCTGAGAAGAATGTTGCTGATGGAGAAACTGCTGCAGACTCGGAAAGGAATGGTAATATATCTGCATATTCATCCATACCCTCAGAAGACTTGCTTGCAGACACCTCTCAAACTAGTTTGGCTGCAATTAATGCCAAAACTACAGCTTCAGATGATTTTTCTGCAAAAGATACAAGTACAAAAAATATGCTTGATAGTGAGAAATTATCTGACTTCAGTGGAAATGGCTTAGCATCTGTCTCCCCTCAGCTTGAGGAAATTCTTGATCGAGCTCTGGGACTTGGATCTGTTGCCAAATCAAATAAAAGTTATGAAGCTGAGAATACTCAGCTTGATTTAAGCAGTGAGAATCGTAACGAACCAAGCAAACCTGCAGTAAGGGATAAACCGTATATATCAAAAGCTGAGAGAAGAAAGCTTAAAAATGAACCGAAACATGGAGAAGCACATCCAAGCGATGGACATGGAAAGGACAAATCAAAGTTAAAAGATATTTCTGGTGATCTGCATGCAAAAGATGCTGAAAATTTGAAGACCGGTGGTGGTAAAAAAATCAGCCGTGGACAAAAGGGAAAACTTAAGAAGATAAAGGAGAAGTATGCTGACCAAGACGAGGAAGAAAGGAGCATCCGAATGTCATTATTGGCTTCTTCTGGAAAACCAATCAAGAAGGAAGAGACATTACCTGTAAATGAAGCCTCGGACAAAGGGAAAAAATCTGACAGTGGTCCTGTAGATGCTCCGAAAATATGTTACAAGTGTAAGAGGGTAGGTCATTTATCTCGGGATTGTAAGGAGCAACCAAATGATCTGTTGCATAGTCATGCAACCAGTGAAGCTGAAGAAAATCCTAACATGAGTGCTTCAAACTTGTCCTTAGAAGATAGAGTGGCAATGGAAGAAGATGATATTAATGAAATAGGAGAAGAAGAGAAAGAAAAACTGAATGATGTGGATTACTTAACAGGGAATCCACTCCCAACTGACATTCTCTTATATGCTGTTCCCGTATGTGGTCCATACAATGCAGTTCAATCTTACAAGTATCGAGTGAAGATAATTCCCGGACCTGTGAAGAAAGGGAAAGCTGCAAAAACTGCAATGAACCTATTCAGCCACATGTCAGAAGCAACAAATCGTGAGAAGGAGTTGATGAAAGCCTGTACTGATCCTGAATTAGTTGCTTCAATTGTTGGTAATGTGAAGATAACTGCAGCTGGACTTACTCAATTGAAGCAAAAACAAAAGAAAGGCAAAAAGAGCAGTGCCAAACAAGGGAGTTAG
Protein sequence

>Msa1437330

MVKVRMNTADVAAEVKCLRRLIGMRCSNVYDLTPKTYVFKLMNSSGMTESGESEKVLLLMESGARLHTTVYMRDKSNTPSGFTLKLRKHIRTRRLEDVRQLGYDRIVLFQFGLGENAYYVILELYAQGNVILTDSSFTVLTLLRSHRDDDKGLAIMSRHRYPVESCRVFERTTTTKLQTALTSSKEDDNDEAVKANGNGTDVSNVEKEKQGSKKGGKSYATLKIILGEALGYGPALSEHMILDAGLIPNEKVPKDKVWDDATVQALVQAVAKFEDWMQDIISGEIVPEGYILMQNKMLGKDSSVSQPESLKQIYDEFCPILLNQFKSRDHTKFETFDLALDEFYSKIESQRSEQQHKAKENSALQKLNKIRNDQENRVHTLRKEADNCIKMAELIEYNLEDVDAAILAVRVSLAKGMSWDDLARMVKEEKKAGNPVAGLIDKLHLERNCMTLLLSNNLDEMDDDEKTLPADKVEVDLALSAHANARRWYELKKKQESKQEKTITAHEKAFKAAERKTRLQLNQEKTVASISHMRKVHWFEKFNWFISSENYLVISGRDAQQNEMIVKRYMSKGDLYVHAELHGASSTVIKNHKPLQPVPPLTLNQAGCFTVCHSQAWDSKIVTSAWWVYPHQVSKTAPTGEYLTVGSFMIRGKKNYLPPHPLIMGFGLLFRLDESSLGSHLNERRVRGEEETIDDNVADGGEEETGPVEEQFDSESEKNVADGETAADSERNGNISAYSSIPSEDLLADTSQTSLAAINAKTTASDDFSAKDTSTKNMLDSEKLSDFSGNGLASVSPQLEEILDRALGLGSVAKSNKSYEAENTQLDLSSENRNEPSKPAVRDKPYISKAERRKLKNEPKHGEAHPSDGHGKDKSKLKDISGDLHAKDAENLKTGGGKKISRGQKGKLKKIKEKYADQDEEERSIRMSLLASSGKPIKKEETLPVNEASDKGKKSDSGPVDAPKICYKCKRVGHLSRDCKEQPNDLLHSHATSEAEENPNMSASNLSLEDRVAMEEDDINEIGEEEKEKLNDVDYLTGNPLPTDILLYAVPVCGPYNAVQSYKYRVKIIPGPVKKGKAAKTAMNLFSHMSEATNREKELMKACTDPELVASIVGNVKITAAGLTQLKQKQKKGKKSSAKQGS*