Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390350 | XP_003592995.2 | 96.870 | 1182 | 20 | 3 | 1 | 1168 | 1 | 1179 | 0.0 | 2326 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390350 | G7INR8 | 96.870 | 1182 | 20 | 3 | 1 | 1168 | 1 | 1179 | 0.0 | 2326 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0023330 | Msa1390350 | 0.804265 | 2.346771e-49 | -8.615850e-47 |
| Msa0031180 | Msa1390350 | 0.815793 | 7.705479e-52 | -8.615850e-47 |
| Msa0034180 | Msa1390350 | 0.820325 | 7.282288e-53 | -8.615850e-47 |
| Msa0037120 | Msa1390350 | 0.812346 | 4.440398e-51 | -8.615850e-47 |
| Msa0051210 | Msa1390350 | 0.808947 | 2.411325e-50 | -8.615850e-47 |
| Msa0051450 | Msa1390350 | 0.806424 | 8.283504e-50 | -8.615850e-47 |
| Msa0064110 | Msa1390350 | 0.811512 | 6.745865e-51 | -8.615850e-47 |
| Msa0064920 | Msa1390350 | 0.848104 | 7.578463e-60 | -8.615850e-47 |
| Msa0078480 | Msa1390350 | 0.803270 | 3.776253e-49 | -8.615850e-47 |
| Msa0079370 | Msa1390350 | 0.816721 | 4.778079e-52 | -8.615850e-47 |
| Msa0079390 | Msa1390350 | 0.836155 | 1.104548e-56 | -8.615850e-47 |
| Msa0081900 | Msa1390350 | 0.826190 | 3.108025e-54 | -8.615850e-47 |
| Msa0084340 | Msa1390350 | 0.814250 | 1.695080e-51 | -8.615850e-47 |
| Msa0102140 | Msa1390350 | 0.834237 | 3.367134e-56 | -8.615850e-47 |
| Msa1346080 | Msa1390350 | 0.823048 | 1.708625e-53 | -8.615850e-47 |
| Msa1349450 | Msa1390350 | 0.809448 | 1.883228e-50 | -8.615850e-47 |
| Msa1365350 | Msa1390350 | 0.805705 | 1.173427e-49 | -8.615850e-47 |
| Msa1372290 | Msa1390350 | 0.823005 | 1.748364e-53 | -8.615850e-47 |
| Msa1377080 | Msa1390350 | 0.806248 | 9.021839e-50 | -8.615850e-47 |
| Msa1390350 | Msa1391720 | 0.820980 | 5.150036e-53 | -8.615850e-47 |
| Msa1390350 | Msa1401460 | 0.826744 | 2.293035e-54 | -8.615850e-47 |
| Msa1390350 | Msa1406490 | 0.802062 | 6.702888e-49 | -8.615850e-47 |
| Msa1390350 | Msa1407600 | 0.820559 | 6.435609e-53 | -8.615850e-47 |
| Msa1390350 | Msa1414420 | 0.804784 | 1.828963e-49 | -8.615850e-47 |
| Msa1390350 | Msa1426910 | 0.813524 | 2.451088e-51 | -8.615850e-47 |
| Msa1390350 | Msa1435260 | 0.824895 | 6.297653e-54 | -8.615850e-47 |
| Msa1390350 | Msa1437330 | 0.801083 | 1.064551e-48 | -8.615850e-47 |
| Msa1390350 | Msa1445030 | 0.805464 | 1.318050e-49 | -8.615850e-47 |
| Msa0605190 | Msa1390350 | 0.821758 | 3.405617e-53 | -8.615850e-47 |
| Msa0621600 | Msa1390350 | 0.812585 | 3.936669e-51 | -8.615850e-47 |
| Msa0645530 | Msa1390350 | 0.810075 | 1.380234e-50 | -8.615850e-47 |
| Msa0685090 | Msa1390350 | 0.816277 | 6.009083e-52 | -8.615850e-47 |
| Msa0685750 | Msa1390350 | 0.812914 | 3.336217e-51 | -8.615850e-47 |
| Msa0688070 | Msa1390350 | 0.819934 | 8.946899e-53 | -8.615850e-47 |
| Msa0722070 | Msa1390350 | 0.805987 | 1.023692e-49 | -8.615850e-47 |
| Msa0756380 | Msa1390350 | 0.800351 | 1.501303e-48 | -8.615850e-47 |
| Msa0763400 | Msa1390350 | 0.812406 | 4.307429e-51 | -8.615850e-47 |
| Msa0763890 | Msa1390350 | 0.811131 | 8.163243e-51 | -8.615850e-47 |
| Msa0763920 | Msa1390350 | 0.811764 | 5.946539e-51 | -8.615850e-47 |
| Msa0773590 | Msa1390350 | 0.804401 | 2.199054e-49 | -8.615850e-47 |
| Msa0780280 | Msa1390350 | 0.801503 | 8.730812e-49 | -8.615850e-47 |
| Msa0789560 | Msa1390350 | 0.809002 | 2.346245e-50 | -8.615850e-47 |
| Msa0797030 | Msa1390350 | 0.803226 | 3.856438e-49 | -8.615850e-47 |
| Msa0805420 | Msa1390350 | 0.806064 | 9.860534e-50 | -8.615850e-47 |
| Msa0808100 | Msa1390350 | 0.838859 | 2.238945e-57 | -8.615850e-47 |
| Msa0811040 | Msa1390350 | 0.805963 | 1.035657e-49 | -8.615850e-47 |
| Msa0820200 | Msa1390350 | 0.803216 | 3.875002e-49 | -8.615850e-47 |
| Msa0832090 | Msa1390350 | 0.800943 | 1.136887e-48 | -8.615850e-47 |
| Msa0834750 | Msa1390350 | 0.837289 | 5.673516e-57 | -8.615850e-47 |
| Msa0122580 | Msa1390350 | 0.808147 | 3.572214e-50 | -8.615850e-47 |
| Msa0123300 | Msa1390350 | 0.801952 | 7.063872e-49 | -8.615850e-47 |
| Msa0124320 | Msa1390350 | 0.826723 | 2.320183e-54 | -8.615850e-47 |
| Msa0128180 | Msa1390350 | 0.828394 | 9.212827e-55 | -8.615850e-47 |
| Msa0131290 | Msa1390350 | 0.807623 | 4.617716e-50 | -8.615850e-47 |
| Msa0138210 | Msa1390350 | 0.825602 | 4.286981e-54 | -8.615850e-47 |
| Msa0143850 | Msa1390350 | 0.800661 | 1.298161e-48 | -8.615850e-47 |
| Msa0167850 | Msa1390350 | 0.800434 | 1.443907e-48 | -8.615850e-47 |
| Msa0172080 | Msa1390350 | 0.830131 | 3.490777e-55 | -8.615850e-47 |
| Msa0178570 | Msa1390350 | 0.801634 | 8.208741e-49 | -8.615850e-47 |
| Msa0183420 | Msa1390350 | 0.815709 | 8.046542e-52 | -8.615850e-47 |
| Msa0189110 | Msa1390350 | 0.988540 | 2.018203e-174 | -8.615850e-47 |
| Msa0195710 | Msa1390350 | 0.801472 | 8.861501e-49 | -8.615850e-47 |
| Msa0200560 | Msa1390350 | 0.802997 | 4.301312e-49 | -8.615850e-47 |
| Msa0202730 | Msa1390350 | 0.809004 | 2.343882e-50 | -8.615850e-47 |
| Msa0206010 | Msa1390350 | 0.810979 | 8.802634e-51 | -8.615850e-47 |
| Msa0218370 | Msa1390350 | 0.811442 | 6.988106e-51 | -8.615850e-47 |
| Msa0218460 | Msa1390350 | 0.800046 | 1.731701e-48 | -8.615850e-47 |
| Msa0231240 | Msa1390350 | 0.983347 | 1.697701e-157 | -8.615850e-47 |
| Msa0232340 | Msa1390350 | 0.827346 | 1.645875e-54 | -8.615850e-47 |
| Msa0237310 | Msa1390350 | 0.825469 | 4.607677e-54 | -8.615850e-47 |
| Msa0237470 | Msa1390350 | 0.803337 | 3.657954e-49 | -8.615850e-47 |
| Msa1225800 | Msa1390350 | 0.800987 | 1.113606e-48 | -8.615850e-47 |
| Msa1241570 | Msa1390350 | 0.806399 | 8.383894e-50 | -8.615850e-47 |
| Msa1263060 | Msa1390350 | 0.821141 | 4.728030e-53 | -8.615850e-47 |
| Msa1265720 | Msa1390350 | 0.815605 | 8.484319e-52 | -8.615850e-47 |
| Msa1302550 | Msa1390350 | 0.824908 | 6.255589e-54 | -8.615850e-47 |
| Msa1329550 | Msa1390350 | 0.811801 | 5.838688e-51 | -8.615850e-47 |
| Msa1333680 | Msa1390350 | 0.804454 | 2.143436e-49 | -8.615850e-47 |
| Msa1333730 | Msa1390350 | 0.870044 | 1.963859e-66 | -8.615850e-47 |
| Msa0373450 | Msa1390350 | 0.807677 | 4.497029e-50 | -8.615850e-47 |
| Msa0377440 | Msa1390350 | 0.814369 | 1.595990e-51 | -8.615850e-47 |
| Msa0389910 | Msa1390350 | 0.802636 | 5.107911e-49 | -8.615850e-47 |
| Msa0390960 | Msa1390350 | 0.816049 | 6.756940e-52 | -8.615850e-47 |
| Msa0423840 | Msa1390350 | 0.836580 | 8.608053e-57 | -8.615850e-47 |
| Msa0438040 | Msa1390350 | 0.807008 | 6.233060e-50 | -8.615850e-47 |
| Msa0439970 | Msa1390350 | 0.818877 | 1.557971e-52 | -8.615850e-47 |
| Msa0455760 | Msa1390350 | 0.802761 | 4.811197e-49 | -8.615850e-47 |
| Msa0981310 | Msa1390350 | 0.816325 | 5.862788e-52 | -8.615850e-47 |
| Msa0983770 | Msa1390350 | 0.807195 | 5.691693e-50 | -8.615850e-47 |
| Msa1026640 | Msa1390350 | 0.802171 | 6.367733e-49 | -8.615850e-47 |
| Msa1077070 | Msa1390350 | 0.838790 | 2.333240e-57 | -8.615850e-47 |
| Msa1081330 | Msa1390350 | 0.827310 | 1.679384e-54 | -8.615850e-47 |
| Msa0245860 | Msa1390350 | 0.817680 | 2.908767e-52 | -8.615850e-47 |
| Msa0249100 | Msa1390350 | 0.834246 | 3.348458e-56 | -8.615850e-47 |
| Msa0251270 | Msa1390350 | 0.805746 | 1.150080e-49 | -8.615850e-47 |
| Msa0271790 | Msa1390350 | 0.837630 | 4.642106e-57 | -8.615850e-47 |
| Msa0274730 | Msa1390350 | 0.825590 | 4.313582e-54 | -8.615850e-47 |
| Msa0280150 | Msa1390350 | 0.847036 | 1.490293e-59 | -8.615850e-47 |
| Msa0281640 | Msa1390350 | 0.800078 | 1.706367e-48 | -8.615850e-47 |
| Msa0308560 | Msa1390350 | 0.816527 | 5.281028e-52 | -8.615850e-47 |
| Msa0310430 | Msa1390350 | 0.814947 | 1.188562e-51 | -8.615850e-47 |
| Msa0315290 | Msa1390350 | 0.805911 | 1.061840e-49 | -8.615850e-47 |
| Msa0315530 | Msa1390350 | 0.812726 | 3.666641e-51 | -8.615850e-47 |
| Msa0320800 | Msa1390350 | 0.820571 | 6.391885e-53 | -8.615850e-47 |
| Msa0323370 | Msa1390350 | 0.983316 | 2.066766e-157 | -8.615850e-47 |
| Msa0326110 | Msa1390350 | 0.810903 | 9.146381e-51 | -8.615850e-47 |
| Msa1109820 | Msa1390350 | 0.827745 | 1.320024e-54 | -8.615850e-47 |
| Msa1118110 | Msa1390350 | 0.816399 | 5.642592e-52 | -8.615850e-47 |
| Msa1122780 | Msa1390350 | 0.818558 | 1.841518e-52 | -8.615850e-47 |
| Msa1206100 | Msa1390350 | 0.813977 | 1.947643e-51 | -8.615850e-47 |
| Msa1223870 | Msa1390350 | 0.820967 | 5.184531e-53 | -8.615850e-47 |
| Msa1224480 | Msa1390350 | 0.820231 | 7.649435e-53 | -8.615850e-47 |
| Msa0510990 | Msa1390350 | 0.803085 | 4.124507e-49 | -8.615850e-47 |
| Msa0517650 | Msa1390350 | 0.822350 | 2.483183e-53 | -8.615850e-47 |
| Msa0566350 | Msa1390350 | 0.817563 | 3.091136e-52 | -8.615850e-47 |
| Msa0566750 | Msa1390350 | 0.813078 | 3.070994e-51 | -8.615850e-47 |
| Msa0574850 | Msa1390350 | 0.807841 | 4.150794e-50 | -8.615850e-47 |
| Msa0866410 | Msa1390350 | 0.804504 | 2.092877e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390350 | MtrunA17_Chr2g0277571 | 96.870 | 1182 | 20 | 3 | 1 | 1168 | 1 | 1179 | 0.0 | 2326 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1390350 | AT1G22930.1 | 53.252 | 1153 | 471 | 21 | 30 | 1164 | 25 | 1127 | 0.0 | 1102 |
| Msa1390350 | AT1G22930.2 | 52.587 | 1063 | 442 | 18 | 117 | 1164 | 1 | 1016 | 0.0 | 1004 |
| Msa1390350 | AT4G09150.2 | 45.790 | 1164 | 550 | 19 | 8 | 1164 | 4 | 1093 | 0.0 | 902 |
| Msa1390350 | AT4G09150.1 | 50.749 | 534 | 245 | 7 | 8 | 538 | 4 | 522 | 8.59e-141 | 454 |
Find 275 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGATGGCTTTCTTCTAAT+TGG | 0.152341 | tig0021335:-2315 | Msa1390350:CDS |
| ATATCATCCTTCCAGCTTAT+TGG | 0.163476 | tig0021335:+3149 | None:intergenic |
| ATTGGTTCTCCTTTGCATTC+TGG | 0.184066 | tig0021335:+2015 | None:intergenic |
| AAGTGTCACTTTCCTTAAAA+AGG | 0.198764 | tig0021335:+3611 | None:intergenic |
| TCACATGTTCTTCCCATTCT+TGG | 0.215997 | tig0021335:+2281 | None:intergenic |
| CTTGGAGTTTGGCTTGTCAT+TGG | 0.216221 | tig0021335:+3718 | None:intergenic |
| CAAAGCACGCATAAGATTAA+TGG | 0.227244 | tig0021335:-2440 | Msa1390350:CDS |
| CCTGCCTAGCTAAGCGCATC+TGG | 0.230899 | tig0021335:+5766 | None:intergenic |
| AAGTTAAGAGATAAAGTTTC+TGG | 0.262553 | tig0021335:+1922 | None:intergenic |
| TCTTTGTGCTTATATGATAT+TGG | 0.264256 | tig0021335:-4512 | Msa1390350:CDS |
| AATGCCTTTGCAAACAAATA+TGG | 0.269636 | tig0021335:-2376 | Msa1390350:CDS |
| CGAAGAGAAGCTTGACTCTA+TGG | 0.269749 | tig0021335:+3585 | None:intergenic |
| TCCTGTAAAGTTTAGTGATA+TGG | 0.279904 | tig0021335:-1176 | Msa1390350:three_prime_UTR |
| GGGTTTATAATAAACGAGTT+TGG | 0.285059 | tig0021335:+7669 | None:intergenic |
| GGTTAAGGATGCTCGATCTT+TGG | 0.289741 | tig0021335:-4254 | Msa1390350:CDS |
| GTTTGTCCTTGAACAGATTC+AGG | 0.289816 | tig0021335:-2782 | Msa1390350:intron |
| GTAGTTGCTGCCAGAATGTT+AGG | 0.294334 | tig0021335:-1539 | Msa1390350:CDS |
| GGCCTTTATTATCTCCTCAT+TGG | 0.301242 | tig0021335:+2900 | None:intergenic |
| TCCGCTATCCTTTACTCTTA+AGG | 0.307130 | tig0021335:+3744 | None:intergenic |
| ATCCAAGCTAGTATAATAAT+TGG | 0.309646 | tig0021335:+4684 | None:intergenic |
| ACCATATCACTAAACTTTAC+AGG | 0.309808 | tig0021335:+1175 | None:intergenic |
| GAACATCGTGAAGGACTTCT+TGG | 0.314155 | tig0021335:+6690 | None:intergenic |
| AATTAGAAGAAAGCCATCTA+AGG | 0.317504 | tig0021335:+2317 | None:intergenic |
| GTGGAGTTGGGCTTGGAGTT+TGG | 0.319271 | tig0021335:+3707 | None:intergenic |
| CTCTTCCTTTGACCCTTAGA+TGG | 0.319967 | tig0021335:-2330 | Msa1390350:CDS |
| AGTTGTAAGCTGTTCATCTT+AGG | 0.325225 | tig0021335:-1200 | Msa1390350:three_prime_UTR |
| CTTTGTGCTTATATGATATT+GGG | 0.325531 | tig0021335:-4511 | Msa1390350:CDS |
| TAAGCTCTTCCCTAACATTC+TGG | 0.327400 | tig0021335:+1529 | None:intergenic |
| TCAGACTGTGAAAACTTTGC+TGG | 0.328722 | tig0021335:-4752 | Msa1390350:CDS |
| GGGCTTCTTGTAGAACTTCT+AGG | 0.333123 | tig0021335:+4610 | None:intergenic |
| TTGGAGTTTGGCTTGTCATT+GGG | 0.336666 | tig0021335:+3719 | None:intergenic |
| TTCTTTGCCTGCGAGCCTTT+AGG | 0.337500 | tig0021335:+5625 | None:intergenic |
| GGTTTATAATAAACGAGTTT+GGG | 0.339936 | tig0021335:+7670 | None:intergenic |
| ACATTGATCACCTTCTTAAA+CGG | 0.344539 | tig0021335:-4660 | Msa1390350:CDS |
| CTTTGCGTGGAGTTGTGCTT+GGG | 0.345421 | tig0021335:-1457 | Msa1390350:CDS |
| TCGATCTTTGGAGGATGATT+TGG | 0.346054 | tig0021335:-4242 | Msa1390350:CDS |
| GTTACTTCGTTGAATTGTTA+TGG | 0.347562 | tig0021335:-7309 | Msa1390350:exon |
| AGACAATGGAGAAGGCCTTT+TGG | 0.350108 | tig0021335:-3268 | Msa1390350:CDS |
| TTCAACTCATGGAAGAGGTT+AGG | 0.352823 | tig0021335:-3193 | Msa1390350:CDS |
| GACAAAGAGCTGAATATATC+AGG | 0.356166 | tig0021335:-5215 | Msa1390350:CDS |
| ATTAATGGAGCCTTTGCTTA+AGG | 0.356621 | tig0021335:-2425 | Msa1390350:CDS |
| TTGAAATATTTCTTTCGCTT+GGG | 0.362058 | tig0021335:+3668 | None:intergenic |
| TGAGTATTTGAACTGGTAAT+AGG | 0.365020 | tig0021335:+3562 | None:intergenic |
| GTGGTTATGCGTTCGAGAAT+TGG | 0.365097 | tig0021335:-5176 | Msa1390350:CDS |
| TATCTAAAGGTGCTTAAATC+AGG | 0.366034 | tig0021335:-2997 | Msa1390350:intron |
| CAAGAGTTGTTCTGCACACT+TGG | 0.368784 | tig0021335:+1670 | None:intergenic |
| GCTTAAGGGACCTGCTGGTC+TGG | 0.369935 | tig0021335:-2410 | Msa1390350:CDS |
| GCATAGTAATGCCTTGTGTT+TGG | 0.373406 | tig0021335:+2879 | None:intergenic |
| TTAATGGAGCCTTTGCTTAA+GGG | 0.378720 | tig0021335:-2424 | Msa1390350:CDS |
| TGTATTTGCGTGCATATAAT+GGG | 0.380608 | tig0021335:+1038 | None:intergenic |
| AGCCTTCGTCGGAGTCGTTT+CGG | 0.382352 | tig0021335:+7194 | None:intergenic |
| GACTCGAGAGAGCAAATATA+AGG | 0.384281 | tig0021335:-5556 | Msa1390350:CDS |
| AAAAGGTGAAGGACTTGTTT+GGG | 0.384630 | tig0021335:+7649 | None:intergenic |
| CTGTGAAAACTTTGCTGGAC+CGG | 0.387801 | tig0021335:-4747 | Msa1390350:CDS |
| TGTTTGATTCATCTCTAGAT+TGG | 0.388525 | tig0021335:+2839 | None:intergenic |
| ATGTGTTGTAGCCTTGGTTA+AGG | 0.396148 | tig0021335:-2812 | Msa1390350:CDS |
| AAATGGCACTACTGAAAGTT+GGG | 0.396482 | tig0021335:-1403 | Msa1390350:CDS |
| GGTGCTTAAATCAGGTCAAC+TGG | 0.397346 | tig0021335:-2989 | Msa1390350:CDS |
| TGGGAGGAAATTAGCTGAAA+TGG | 0.400072 | tig0021335:-1420 | Msa1390350:CDS |
| GGTGCACGCTAAAGTCTTGC+AGG | 0.400289 | tig0021335:-5451 | Msa1390350:CDS |
| CTTCCATGAGTTGAATAATC+TGG | 0.402422 | tig0021335:+3201 | None:intergenic |
| ATCAAAACGACTTCAGTTGC+TGG | 0.402646 | tig0021335:-5490 | Msa1390350:CDS |
| TTTATTATCTCCTCATTGGC+TGG | 0.404642 | tig0021335:+2904 | None:intergenic |
| TTTGAAATATTTCTTTCGCT+TGG | 0.407293 | tig0021335:+3667 | None:intergenic |
| CATTGATCACCTTCTTAAAC+GGG | 0.408961 | tig0021335:-4659 | Msa1390350:CDS |
| AGTTAAACAATAGCTTATCT+AGG | 0.410401 | tig0021335:-4561 | Msa1390350:CDS |
| AGTAGCAAGCTCTGCAGATA+TGG | 0.417016 | tig0021335:-1705 | Msa1390350:CDS |
| TGTGTTGTAGCCTTGGTTAA+GGG | 0.419531 | tig0021335:-2811 | Msa1390350:CDS |
| CCTTCAACTACTCTCAGAAC+TGG | 0.419817 | tig0021335:-2217 | Msa1390350:CDS |
| TTGAATAATCTGGTCATAGT+TGG | 0.419886 | tig0021335:+3211 | None:intergenic |
| TTCAGCTAATTTCCTCCCAC+TGG | 0.421425 | tig0021335:+1424 | None:intergenic |
| TCAACTCATGGAAGAGGTTA+GGG | 0.422456 | tig0021335:-3192 | Msa1390350:CDS |
| AACAAATTCTTGAGCAGACT+TGG | 0.423461 | tig0021335:+4438 | None:intergenic |
| CGCCAGACTGAGGTCTCTCC+AGG | 0.424726 | tig0021335:-1899 | Msa1390350:CDS |
| GGGGAAGTGGGGCCAGTGGG+AGG | 0.426486 | tig0021335:-1436 | Msa1390350:CDS |
| TCATTTACAAGAACCTCGTT+TGG | 0.427156 | tig0021335:+3508 | None:intergenic |
| GCAAATGAGCGCGTGAAGCT+TGG | 0.428386 | tig0021335:-5699 | Msa1390350:CDS |
| GCTTTGCGTGGAGTTGTGCT+TGG | 0.428833 | tig0021335:-1458 | Msa1390350:CDS |
| CCAGATGCGCTTAGCTAGGC+AGG | 0.430057 | tig0021335:-5766 | Msa1390350:CDS |
| CTCTGAGGCGGCTCTCAAAC+CGG | 0.434280 | tig0021335:+4728 | None:intergenic |
| GACGAAGGCATATGCCGTGC+TGG | 0.436897 | tig0021335:-4848 | Msa1390350:CDS |
| GCTGATATTGAAGACATTGT+AGG | 0.436983 | tig0021335:-1623 | Msa1390350:CDS |
| TGATTTAGATATTCTGTCTC+AGG | 0.442114 | tig0021335:-3114 | Msa1390350:intron |
| CCTGATGGTTCAAATACTAA+AGG | 0.442656 | tig0021335:-2148 | Msa1390350:intron |
| ATTGTACTGAAAACTGCATC+TGG | 0.442866 | tig0021335:+4484 | None:intergenic |
| AGCCAATGAGGAGATAATAA+AGG | 0.443152 | tig0021335:-2902 | Msa1390350:CDS |
| AATTGTTATGGCGGCGGGAG+TGG | 0.444156 | tig0021335:-7297 | Msa1390350:exon |
| TGCCAATTATTATACTAGCT+TGG | 0.444866 | tig0021335:-4686 | Msa1390350:CDS |
| AAGTTAGTAAGTGGAATATC+TGG | 0.445642 | tig0021335:-1964 | Msa1390350:CDS |
| GCATCTGGGCCTTCGTCAAA+AGG | 0.446065 | tig0021335:+5781 | None:intergenic |
| TGCAATCTGCCATCAGTTGA+CGG | 0.446093 | tig0021335:-1593 | Msa1390350:CDS |
| TACGGAATCTGCTACCGTTA+CGG | 0.446758 | tig0021335:-7346 | Msa1390350:five_prime_UTR |
| GAAATGGCACTACTGAAAGT+TGG | 0.447095 | tig0021335:-1404 | Msa1390350:CDS |
| TAAAGGCTCGCAGGCAAAGA+AGG | 0.447389 | tig0021335:-5623 | Msa1390350:CDS |
| GGGCGAGCGTGAAATTGCTT+TGG | 0.447463 | tig0021335:-4461 | Msa1390350:CDS |
| TCGATTTCTTCCACCGAACT+CGG | 0.448697 | tig0021335:+7149 | None:intergenic |
| TAATCTTCTGAATTTGAGCC+TGG | 0.449755 | tig0021335:+1881 | None:intergenic |
| CAAATGAGCGCGTGAAGCTT+GGG | 0.449988 | tig0021335:-5698 | Msa1390350:CDS |
| AGCCTCACAACAAGATCAAT+TGG | 0.450301 | tig0021335:+1997 | None:intergenic |
| TCGCCGTCGTTGCTCCGTTA+CGG | 0.450313 | tig0021335:-7364 | Msa1390350:five_prime_UTR |
| CTGCTGGTCTGGACTACCTT+AGG | 0.450452 | tig0021335:-2399 | Msa1390350:CDS |
| AGAAGAGCAAACTGCTCAAA+TGG | 0.452623 | tig0021335:+4796 | None:intergenic |
| CCTTTAGTATTTGAACCATC+AGG | 0.454225 | tig0021335:+2148 | None:intergenic |
| ATTGATCTTGTTGTGAGGCT+TGG | 0.456918 | tig0021335:-1994 | Msa1390350:CDS |
| GTAGAAAGTGGAGTTGGGCT+TGG | 0.457503 | tig0021335:+3700 | None:intergenic |
| AGTTTCTGGTAGATCATCTT+GGG | 0.459088 | tig0021335:+1936 | None:intergenic |
| GCTTCACGCGCTCATTTGCA+TGG | 0.462233 | tig0021335:+5703 | None:intergenic |
| GGCGGCGGGAGTGGAATTAC+CGG | 0.470230 | tig0021335:-7288 | Msa1390350:CDS |
| TATGAAAGCTATTCAGCATC+AGG | 0.470987 | tig0021335:-4140 | Msa1390350:intron |
| CAAGTGTGCAGAACAACTCT+TGG | 0.472505 | tig0021335:-1669 | Msa1390350:CDS |
| ATGCACCTGAGTGGAGATGC+TGG | 0.472865 | tig0021335:-3811 | Msa1390350:CDS |
| AAGCTAGTATAATAATTGGC+AGG | 0.473222 | tig0021335:+4688 | None:intergenic |
| TCAGTTGACGGTGAAGATGC+AGG | 0.478387 | tig0021335:-1581 | Msa1390350:CDS |
| CTGCCTAGCTAAGCGCATCT+GGG | 0.479809 | tig0021335:+5767 | None:intergenic |
| CGTTGAATTGTTATGGCGGC+GGG | 0.479837 | tig0021335:-7302 | Msa1390350:exon |
| GGAGTGTAAGTCACCGAGTT+CGG | 0.480480 | tig0021335:-7162 | Msa1390350:CDS |
| CCTTTGCTTAAGGGACCTGC+TGG | 0.480995 | tig0021335:-2415 | Msa1390350:CDS |
| GAAAGCCATCTAAGGGTCAA+AGG | 0.481283 | tig0021335:+2325 | None:intergenic |
| ACTATATCAGTTGGTGTTCA+CGG | 0.481707 | tig0021335:-1323 | Msa1390350:CDS |
| AAGTTTCTGGTAGATCATCT+TGG | 0.481739 | tig0021335:+1935 | None:intergenic |
| AATATTATGCTCAAAAGTAC+TGG | 0.483848 | tig0021335:-2190 | Msa1390350:CDS |
| AGTGGAATCACGTGTTCAGC+AGG | 0.486274 | tig0021335:-5670 | Msa1390350:CDS |
| ATCTAGATCCTTAAGAGTAA+AGG | 0.486331 | tig0021335:-3752 | Msa1390350:CDS |
| GGATCTTGGTCAGCGATTAG+AGG | 0.486551 | tig0021335:-6655 | Msa1390350:CDS |
| TGAATAATCTGGTCATAGTT+GGG | 0.489027 | tig0021335:+3212 | None:intergenic |
| CTTCTTTAAGGTGCTGGAGG+CGG | 0.489191 | tig0021335:-4903 | Msa1390350:intron |
| TCATCTCAGGATGAGGATCT+TGG | 0.490772 | tig0021335:-6669 | Msa1390350:CDS |
| CAATGCATGTGTTGTAGCCT+TGG | 0.491792 | tig0021335:-2818 | Msa1390350:CDS |
| GCAACAGTAGAAAGTGGAGT+TGG | 0.492864 | tig0021335:+3694 | None:intergenic |
| TAGAGCAGCTTGCCAGCTTG+AGG | 0.496691 | tig0021335:-4218 | Msa1390350:CDS |
| TAATAGAATGCTTATCCTAA+AGG | 0.498395 | tig0021335:-5640 | Msa1390350:CDS |
| ACGAAGGCATATGCCGTGCT+GGG | 0.499605 | tig0021335:-4847 | Msa1390350:CDS |
| CCAGTTCTGAGAGTAGTTGA+AGG | 0.500604 | tig0021335:+2217 | None:intergenic |
| TCCTTCACGATGTTCATCTC+AGG | 0.503488 | tig0021335:-6682 | Msa1390350:CDS |
| CAACAGTAGAAAGTGGAGTT+GGG | 0.504008 | tig0021335:+3695 | None:intergenic |
| TGTTATGGAATCTGTTAAGC+AGG | 0.504226 | tig0021335:-3240 | Msa1390350:CDS |
| GACACACCTGAATCTGTTCA+AGG | 0.507477 | tig0021335:+2776 | None:intergenic |
| TCAGATTATTATGAGTGAAA+AGG | 0.510180 | tig0021335:-1729 | Msa1390350:CDS |
| TTCCATAACACTATCCCAAA+AGG | 0.513046 | tig0021335:+3253 | None:intergenic |
| ACAAAGCTCTCTCTCGAAGC+TGG | 0.513379 | tig0021335:-7575 | Msa1390350:five_prime_UTR |
| ATAGCTTATCTAGGTTATCA+AGG | 0.513478 | tig0021335:-4552 | Msa1390350:CDS |
| GAAGAGAAGCTTGACTCTAT+GGG | 0.515538 | tig0021335:+3586 | None:intergenic |
| AGAAGAAGAAGAAATTAGAA+CGG | 0.515731 | tig0021335:+7498 | None:intergenic |
| GTGAGATGGCTCCAATAAGC+TGG | 0.516218 | tig0021335:-3160 | Msa1390350:CDS |
| TAAGGATGCTCGATCTTTGG+AGG | 0.517564 | tig0021335:-4251 | Msa1390350:CDS |
| ACTTGCAAGTTAACTTCAGA+AGG | 0.519558 | tig0021335:-4181 | Msa1390350:CDS |
| CAGTTGGTGTTCACGGGCCA+TGG | 0.519673 | tig0021335:-1316 | Msa1390350:CDS |
| CTATATCAGTTGGTGTTCAC+GGG | 0.519695 | tig0021335:-1322 | Msa1390350:CDS |
| AGGCCCAGATGCGCTTAGCT+AGG | 0.520214 | tig0021335:-5770 | Msa1390350:CDS |
| TCATGCTCAAATTCGTAGAC+AGG | 0.520852 | tig0021335:-7114 | Msa1390350:intron |
| CTAAGGTAGTCCAGACCAGC+AGG | 0.520955 | tig0021335:+2400 | None:intergenic |
| CTTCAACTACTCTCAGAACT+GGG | 0.522517 | tig0021335:-2216 | Msa1390350:CDS |
| GTGAACACCAACTGATATAG+TGG | 0.523402 | tig0021335:+1325 | None:intergenic |
| CAAAACTACGGTGATGCTCA+TGG | 0.524225 | tig0021335:+3479 | None:intergenic |
| AGTAGTTGAAGGAAGCCCTT+GGG | 0.525794 | tig0021335:+2228 | None:intergenic |
| TGCTGGAAGCTGAGAAGAAG+AGG | 0.527661 | tig0021335:-5473 | Msa1390350:CDS |
| TACCGAAACGACTCCGACGA+AGG | 0.527800 | tig0021335:-7196 | Msa1390350:CDS |
| AAGTTAACTTCAGAAGGAGT+TGG | 0.528728 | tig0021335:-4175 | Msa1390350:CDS |
| TGTGAATTCCTCCTCAGCAT+TGG | 0.530126 | tig0021335:-2263 | Msa1390350:CDS |
| TAGGGAAGAGCTTACAAGCT+GGG | 0.531041 | tig0021335:-1520 | Msa1390350:CDS |
| AGCCTGGAGAGACCTCAGTC+TGG | 0.531766 | tig0021335:+1897 | None:intergenic |
| ATATGCCTTCGTCAAGGTAA+AGG | 0.532947 | tig0021335:+4858 | None:intergenic |
| TGCTTATCCTAAAGGCTCGC+AGG | 0.536232 | tig0021335:-5632 | Msa1390350:CDS |
| GGTTTGCTGAAGTTAGTAAG+TGG | 0.537597 | tig0021335:-1973 | Msa1390350:CDS |
| ACTGAGCTGAGTATTTGAAC+TGG | 0.538751 | tig0021335:+3555 | None:intergenic |
| GAAGGGCATCTCTTAGAGAA+AGG | 0.539061 | tig0021335:-5605 | Msa1390350:CDS |
| AGCAGCAAGCTGTGATCTGA+AGG | 0.542055 | tig0021335:+4324 | None:intergenic |
| GATTATTCAACTCATGGAAG+AGG | 0.543798 | tig0021335:-3198 | Msa1390350:CDS |
| CCGACGAAGGCTTCTAGATA+CGG | 0.543833 | tig0021335:-7183 | Msa1390350:CDS |
| CTGGGGATGCTGTGTTTGAG+AGG | 0.545867 | tig0021335:-1502 | Msa1390350:CDS |
| AGACAGAATATCTAAATCAA+TGG | 0.546424 | tig0021335:+3118 | None:intergenic |
| TTGGATTACAATGTCAAAGC+AGG | 0.547212 | tig0021335:-5157 | Msa1390350:CDS |
| TGACCAGATTATTCAACTCA+TGG | 0.548277 | tig0021335:-3204 | Msa1390350:CDS |
| CGTGAAGCTTGGGACAAAAG+TGG | 0.555129 | tig0021335:-5688 | Msa1390350:CDS |
| TAGAAGTTCTACAAGAAGCC+CGG | 0.557892 | tig0021335:-4608 | Msa1390350:CDS |
| TCAGTTAAATATTTATACCA+TGG | 0.558194 | tig0021335:+1299 | None:intergenic |
| TAGGGATGAAATTTGTGAGA+TGG | 0.559614 | tig0021335:-3174 | Msa1390350:CDS |
| GAGTAGTTGAAGGAAGCCCT+TGG | 0.561462 | tig0021335:+2227 | None:intergenic |
| TCGTTGAATTGTTATGGCGG+CGG | 0.562616 | tig0021335:-7303 | Msa1390350:exon |
| AGATCCATATTTGTTTGCAA+AGG | 0.563460 | tig0021335:+2372 | None:intergenic |
| ATCTTTCCAGAAAACTAGCA+AGG | 0.564319 | tig0021335:-5128 | Msa1390350:intron |
| GAATCATCGAAGCCTCAAGC+TGG | 0.565668 | tig0021335:+4206 | None:intergenic |
| ATCACGTGTTCAGCAGGCTG+AGG | 0.566237 | tig0021335:-5664 | Msa1390350:CDS |
| GCATCTTCACCGTCAACTGA+TGG | 0.568336 | tig0021335:+1584 | None:intergenic |
| GGTGCTGGAGGCGGTTCTCG+AGG | 0.570699 | tig0021335:-4894 | Msa1390350:CDS |
| AAAGGCTCGCAGGCAAAGAA+GGG | 0.571629 | tig0021335:-5622 | Msa1390350:CDS |
| CAATCCCAGCATCTCCACTC+AGG | 0.572389 | tig0021335:+3806 | None:intergenic |
| TTGGCTGATAATTCATCCCA+AGG | 0.573407 | tig0021335:-2244 | Msa1390350:CDS |
| TTACTTCTTTAAGGTGCTGG+AGG | 0.573749 | tig0021335:-4906 | Msa1390350:intron |
| AGCTAGTATAATAATTGGCA+GGG | 0.575206 | tig0021335:+4689 | None:intergenic |
| TTTCACTCATAATAATCTGA+CGG | 0.575687 | tig0021335:+1732 | None:intergenic |
| GGGAGGCAACCCGTTTAAGA+AGG | 0.576797 | tig0021335:+4650 | None:intergenic |
| GCTTTCTTCTCCAGCCAATG+AGG | 0.578628 | tig0021335:-2914 | Msa1390350:CDS |
| AGAGAGGTACTAGCATCAGA+TGG | 0.580561 | tig0021335:+2349 | None:intergenic |
| CCATCAGGAGAAAAGACCAT+TGG | 0.581401 | tig0021335:+2163 | None:intergenic |
| TGTTTGCAAAGGCATTCCTA+AGG | 0.582243 | tig0021335:+2383 | None:intergenic |
| GTGTAAGTCACCGAGTTCGG+TGG | 0.585239 | tig0021335:-7159 | Msa1390350:CDS |
| TCCTTCTCTCAATCTCACGC+TGG | 0.586409 | tig0021335:+5400 | None:intergenic |
| GCTGTCTATTCAGCTTTGCG+TGG | 0.587735 | tig0021335:-1470 | Msa1390350:CDS |
| ACGATGTTCATCTCAGGATG+AGG | 0.588780 | tig0021335:-6676 | Msa1390350:CDS |
| CTGATAAAGATTATACAAGA+GGG | 0.588879 | tig0021335:-4400 | Msa1390350:CDS |
| AGAGATTCATCATCTCCGAT+TGG | 0.589231 | tig0021335:+7236 | None:intergenic |
| ATTGTGATGGAATTTCCAAT+CGG | 0.589403 | tig0021335:-7251 | Msa1390350:CDS |
| TAGTTGCTGCCAGAATGTTA+GGG | 0.589452 | tig0021335:-1538 | Msa1390350:CDS |
| GCTGATAAAGATTATACAAG+AGG | 0.589849 | tig0021335:-4401 | Msa1390350:CDS |
| TGATGAATCTCTGTCATCGC+CGG | 0.590050 | tig0021335:-7225 | Msa1390350:CDS |
| ATTAGAAGAAAGCCATCTAA+GGG | 0.591932 | tig0021335:+2318 | None:intergenic |
| CAAAAGTACTGGCAGTCCAA+TGG | 0.592198 | tig0021335:-2179 | Msa1390350:CDS |
| GCACTACTGAAAGTTGGGGC+TGG | 0.592476 | tig0021335:-1398 | Msa1390350:CDS |
| GGGCTTGCAACAGTAGAAAG+TGG | 0.596161 | tig0021335:+3688 | None:intergenic |
| CAGTTGACGGTGAAGATGCA+GGG | 0.597673 | tig0021335:-1580 | Msa1390350:CDS |
| TTAGGGAAGAGCTTACAAGC+TGG | 0.601032 | tig0021335:-1521 | Msa1390350:CDS |
| CAACTGGATGTCGATTACCT+TGG | 0.603115 | tig0021335:-2973 | Msa1390350:CDS |
| AGATGCTGGGATTGAGCGCA+TGG | 0.603145 | tig0021335:-3797 | Msa1390350:CDS |
| CAAAGCCATCAGCAAAACTA+CGG | 0.603888 | tig0021335:+3467 | None:intergenic |
| AATCAAACAGACAATGGAGA+AGG | 0.605188 | tig0021335:-3276 | Msa1390350:CDS |
| GGGTAAAATCAAACAGACAA+TGG | 0.605711 | tig0021335:-3282 | Msa1390350:CDS |
| TGCTCTGACTGAAAGTGTAG+TGG | 0.606245 | tig0021335:-1375 | Msa1390350:CDS |
| TGCAAGCCGCTGAACAGAAG+AGG | 0.607721 | tig0021335:-6626 | Msa1390350:intron |
| GATAATAAAGGCCAAACACA+AGG | 0.607954 | tig0021335:-2890 | Msa1390350:CDS |
| AACCAATTGATCTTGTTGTG+AGG | 0.608729 | tig0021335:-1999 | Msa1390350:CDS |
| TTACACACATATATGTGCAT+AGG | 0.611037 | tig0021335:-1232 | Msa1390350:three_prime_UTR |
| AAGAGAAGCTTGACTCTATG+GGG | 0.612046 | tig0021335:+3587 | None:intergenic |
| GTGGCAGCCACTATATCAGT+TGG | 0.613312 | tig0021335:-1332 | Msa1390350:CDS |
| ATTCCGTAACGGAGCAACGA+CGG | 0.613992 | tig0021335:+7361 | None:intergenic |
| ATTATCAGCCAATGCTGAGG+AGG | 0.614892 | tig0021335:+2255 | None:intergenic |
| TGACGGTGAAGATGCAGGGA+AGG | 0.615541 | tig0021335:-1576 | Msa1390350:CDS |
| CCAGCAGGTCCCTTAAGCAA+AGG | 0.619703 | tig0021335:+2415 | None:intergenic |
| AGTCTTGCAGGCGAGACATG+TGG | 0.619807 | tig0021335:-5439 | Msa1390350:CDS |
| TGCACCTGAGTGGAGATGCT+GGG | 0.620777 | tig0021335:-3810 | Msa1390350:CDS |
| CTCTTAACTTCGCCAGACTG+AGG | 0.623175 | tig0021335:-1909 | Msa1390350:CDS |
| AGGGAAGAGCTTACAAGCTG+GGG | 0.623286 | tig0021335:-1519 | Msa1390350:CDS |
| AGTCGTTTCGGTAATCTCAC+CGG | 0.625397 | tig0021335:+7206 | None:intergenic |
| TGGGGATGCTGTGTTTGAGA+GGG | 0.625999 | tig0021335:-1501 | Msa1390350:CDS |
| CTATGAGAAACTTTCAAGCA+AGG | 0.627877 | tig0021335:-6724 | Msa1390350:CDS |
| TTTGCGTGGAGTTGTGCTTG+GGG | 0.629888 | tig0021335:-1456 | Msa1390350:CDS |
| TTTCTCGTTGATCCCCAGCA+CGG | 0.629898 | tig0021335:+4834 | None:intergenic |
| GGCGGGAGTGGAATTACCGG+AGG | 0.630317 | tig0021335:-7285 | Msa1390350:CDS |
| CACGGCATATGCCTTCGTCA+AGG | 0.631359 | tig0021335:+4852 | None:intergenic |
| TGGCTGATAATTCATCCCAA+GGG | 0.634521 | tig0021335:-2243 | Msa1390350:CDS |
| CGAAGGCATATGCCGTGCTG+GGG | 0.635521 | tig0021335:-4846 | Msa1390350:CDS |
| TGAATTATCAGCCAATGCTG+AGG | 0.641122 | tig0021335:+2252 | None:intergenic |
| AACCCACCTCTTCTGTTCAG+CGG | 0.641137 | tig0021335:+6620 | None:intergenic |
| TCAACTACTCTCAGAACTGG+GGG | 0.641856 | tig0021335:-2214 | Msa1390350:CDS |
| AACAACCTTTACCTTGACGA+AGG | 0.642137 | tig0021335:-4863 | Msa1390350:CDS |
| GCTGGAAGCTGAGAAGAAGA+GGG | 0.642650 | tig0021335:-5472 | Msa1390350:CDS |
| TCTAAGGGTCAAAGGAAGAG+AGG | 0.643917 | tig0021335:+2333 | None:intergenic |
| TTGCGTGGAGTTGTGCTTGG+GGG | 0.647042 | tig0021335:-1455 | Msa1390350:CDS |
| ACCAGCGTGAGATTGAGAGA+AGG | 0.647303 | tig0021335:-5401 | Msa1390350:CDS |
| TCCTTAAGAGTAAAGGATAG+CGG | 0.647842 | tig0021335:-3745 | Msa1390350:CDS |
| GATGGCTCCAATAAGCTGGA+AGG | 0.648279 | tig0021335:-3156 | Msa1390350:CDS |
| CCGTATCTAGAAGCCTTCGT+CGG | 0.648602 | tig0021335:+7183 | None:intergenic |
| AAAGTTTGTAGCACCAAACG+AGG | 0.652298 | tig0021335:-3521 | Msa1390350:CDS |
| CAATATCAGCATCTTCAACA+CGG | 0.654236 | tig0021335:+1636 | None:intergenic |
| GAAAAGGTGATGCACCTGAG+TGG | 0.655329 | tig0021335:-3820 | Msa1390350:CDS |
| TCCTGAGATGAACATCGTGA+AGG | 0.660871 | tig0021335:+6681 | None:intergenic |
| GGTCATCTCAGTCATTGATG+AGG | 0.661342 | tig0021335:-5584 | Msa1390350:CDS |
| CAACAGCTGTAAACACTCTG+AGG | 0.662054 | tig0021335:+4713 | None:intergenic |
| GATCAGCAACCAGAATGCAA+AGG | 0.662463 | tig0021335:-2024 | Msa1390350:CDS |
| CAGCTGTAAACACTCTGAGG+CGG | 0.662505 | tig0021335:+4716 | None:intergenic |
| AGGGAAGGTTCAGTCACGAA+AGG | 0.663505 | tig0021335:-1561 | Msa1390350:CDS |
| ACTTCGTTGAATTGTTATGG+CGG | 0.663608 | tig0021335:-7306 | Msa1390350:exon |
| TTCAACTACTCTCAGAACTG+GGG | 0.664299 | tig0021335:-2215 | Msa1390350:CDS |
| GCTGAATATATCAGGCAGAG+AGG | 0.672176 | tig0021335:-5207 | Msa1390350:CDS |
| AGAGAAGCTTGACTCTATGG+GGG | 0.681993 | tig0021335:+3588 | None:intergenic |
| GATCGTAACAAACTCCGTAA+CGG | 0.682958 | tig0021335:+7332 | None:intergenic |
| TCACATTCAAAACAGCGTTG+AGG | 0.693258 | tig0021335:-3434 | Msa1390350:intron |
| AAACTGCAAACCCTTAACCA+AGG | 0.697818 | tig0021335:+2801 | None:intergenic |
| TGATAAAGATTATACAAGAG+GGG | 0.699828 | tig0021335:-4399 | Msa1390350:CDS |
| AACGGTAGCAGATTCCGTAA+CGG | 0.702517 | tig0021335:+7350 | None:intergenic |
| AATGGCACTACTGAAAGTTG+GGG | 0.705403 | tig0021335:-1402 | Msa1390350:CDS |
| GCGGGAGTGGAATTACCGGA+GGG | 0.709899 | tig0021335:-7284 | Msa1390350:CDS |
| AGGCAGAGAGGAAGACTGCG+TGG | 0.717587 | tig0021335:-5195 | Msa1390350:CDS |
| AGATTATTGTGATATCCACA+AGG | 0.732314 | tig0021335:-1864 | Msa1390350:intron |
| GAGCAATAAGACAAGCCGAG+TGG | 0.734191 | tig0021335:-3641 | Msa1390350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTATGAATTGAAAAA+AGG | + | tig0021335:1094-1113 | None:intergenic | 10.0% |
| !!! | ATCATAAAATAGTAATTTTT+TGG | - | tig0021335:2507-2526 | Msa1390350:intron | 10.0% |
| !!! | GTGTTATTTTTTATTTTTTT+TGG | - | tig0021335:3386-3405 | Msa1390350:intron | 10.0% |
| !! | AAATATTGCAAATAATATTA+AGG | + | tig0021335:3720-3739 | None:intergenic | 10.0% |
| !! | ATATTAAAAAAAATCTTAGA+CGG | + | tig0021335:5355-5374 | None:intergenic | 10.0% |
| !!! | TTGATTAAACAAATTTTAAT+TGG | + | tig0021335:6018-6037 | None:intergenic | 10.0% |
| !! | TATATAATAATTAAGTGAAA+GGG | + | tig0021335:6057-6076 | None:intergenic | 10.0% |
| !! | ATATATAATAATTAAGTGAA+AGG | + | tig0021335:6058-6077 | None:intergenic | 10.0% |
| !! | TTTCACTTAATTATTATATA+TGG | - | tig0021335:6057-6076 | Msa1390350:intron | 10.0% |
| !! | TTCACTTAATTATTATATAT+GGG | - | tig0021335:6058-6077 | Msa1390350:intron | 10.0% |
| !! | AAAAATATGAAAAATTGATG+TGG | + | tig0021335:1289-1308 | None:intergenic | 15.0% |
| !!! | TTATTATTTTTTCATTCGTA+CGG | - | tig0021335:1323-1342 | Msa1390350:CDS | 15.0% |
| !!! | CAAAGTTAATTTTTTTAGAA+AGG | + | tig0021335:1648-1667 | None:intergenic | 15.0% |
| !! | CTAGTAAAAATTTGAAAAAA+TGG | - | tig0021335:2175-2194 | Msa1390350:CDS | 15.0% |
| !!! | GAATTAAATTTTTCTATGAT+TGG | + | tig0021335:2740-2759 | None:intergenic | 15.0% |
| !!! | ATTTTTTTAGTTCATCTATT+AGG | - | tig0021335:3745-3764 | Msa1390350:CDS | 15.0% |
| !! | TATTAAAAAAAATCTTAGAC+GGG | + | tig0021335:5354-5373 | None:intergenic | 15.0% |
| !!! | AATTCAAATTCAAAACATTT+TGG | + | tig0021335:5399-5418 | None:intergenic | 15.0% |
| !! | TAGATGTATTACATATATTT+AGG | - | tig0021335:6116-6135 | Msa1390350:intron | 15.0% |
| !! | TTTGGTAAAAAACATAGTTA+GGG | - | tig0021335:2461-2480 | Msa1390350:CDS | 20.0% |
| !! | ATTTAAACTTCTCAAACAAA+AGG | + | tig0021335:2653-2672 | None:intergenic | 20.0% |
| !!! | CATTTTAATTCTGAAAAGTA+TGG | - | tig0021335:4740-4759 | Msa1390350:CDS | 20.0% |
| !!! | CTTTCAATGTTTTATAATAC+AGG | - | tig0021335:4854-4873 | Msa1390350:CDS | 20.0% |
| !! | ATTAAAAAAAATCTTAGACG+GGG | + | tig0021335:5353-5372 | None:intergenic | 20.0% |
| !! | GAAATATAGAAATTATAGTG+AGG | + | tig0021335:5686-5705 | None:intergenic | 20.0% |
| !! | ATTGAAGAGAACAAAAATAA+AGG | + | tig0021335:5984-6003 | None:intergenic | 20.0% |
| !!! | GTATTACATATATTTAGGAT+TGG | - | tig0021335:6121-6140 | Msa1390350:intron | 20.0% |
| !! | AAACAAATATAAGCAATAAG+AGG | + | tig0021335:6201-6220 | None:intergenic | 20.0% |
| !! | TCAGTTAAATATTTATACCA+TGG | + | tig0021335:7427-7446 | None:intergenic | 20.0% |
| ! | GGTTTATAATAAACGAGTTT+GGG | + | tig0021335:1056-1075 | None:intergenic | 25.0% |
| ! | TATGAATTGAAAAAAGGTGA+AGG | + | tig0021335:1088-1107 | None:intergenic | 25.0% |
| ! | AACGGTAGAAAAATTTGAAT+TGG | + | tig0021335:1210-1229 | None:intergenic | 25.0% |
| ! | AGAAGAAGAAGAAATTAGAA+CGG | + | tig0021335:1228-1247 | None:intergenic | 25.0% |
| ! | ACGTGTAAACTATGTAATTA+AGG | + | tig0021335:1731-1750 | None:intergenic | 25.0% |
| !! | TTAGTAATTACTCTGTTTTG+TGG | + | tig0021335:1777-1796 | None:intergenic | 25.0% |
| !! | TGATAGTTTCTTCTCTTTTA+AGG | - | tig0021335:1882-1901 | Msa1390350:CDS | 25.0% |
| ! | TTGAATGTAATTACATGTGT+TGG | - | tig0021335:2203-2222 | Msa1390350:CDS | 25.0% |
| ! | TATTTAAATAGATGCAGAAC+CGG | + | tig0021335:2309-2328 | None:intergenic | 25.0% |
| !!! | ACAAGTTTTAGACCTATTTT+TGG | - | tig0021335:2419-2438 | Msa1390350:CDS | 25.0% |
| !!! | TTCAAATGCACTTTTTTCTT+TGG | - | tig0021335:2443-2462 | Msa1390350:CDS | 25.0% |
| ! | CTTTGGTAAAAAACATAGTT+AGG | - | tig0021335:2460-2479 | Msa1390350:CDS | 25.0% |
| !!! | ATAGTAATTTTTTGGTGTTC+TGG | - | tig0021335:2515-2534 | Msa1390350:intron | 25.0% |
| ! | ATTGACCAATGATAAAGAAA+AGG | + | tig0021335:2560-2579 | None:intergenic | 25.0% |
| !! | TTTCATACTTTGAGAATCAA+TGG | + | tig0021335:2834-2853 | None:intergenic | 25.0% |
| ! | TAATAGAATGCTTATCCTAA+AGG | - | tig0021335:3083-3102 | Msa1390350:intron | 25.0% |
| ! | CAAAAATTACACATGTTACA+TGG | - | tig0021335:3426-3445 | Msa1390350:intron | 25.0% |
| ! | TCTGACAATTTACTTCTTTA+AGG | - | tig0021335:3808-3827 | Msa1390350:CDS | 25.0% |
| ! | ATCCAAGCTAGTATAATAAT+TGG | + | tig0021335:4042-4061 | None:intergenic | 25.0% |
| ! | AAAAAAATCAGATACAGTCA+AGG | - | tig0021335:4139-4158 | Msa1390350:intron | 25.0% |
| ! | AGTTAAACAATAGCTTATCT+AGG | - | tig0021335:4162-4181 | Msa1390350:CDS | 25.0% |
| ! | TCTTTGTGCTTATATGATAT+TGG | - | tig0021335:4211-4230 | Msa1390350:CDS | 25.0% |
| ! | CTTTGTGCTTATATGATATT+GGG | - | tig0021335:4212-4231 | Msa1390350:CDS | 25.0% |
| ! | CTGATAAAGATTATACAAGA+GGG | - | tig0021335:4323-4342 | Msa1390350:CDS | 25.0% |
| ! | TGATAAAGATTATACAAGAG+GGG | - | tig0021335:4324-4343 | Msa1390350:CDS | 25.0% |
| !! | TCTTCATCAGAACTTTTTAT+TGG | + | tig0021335:4350-4369 | None:intergenic | 25.0% |
| ! | ATCAATAACTACCATTGAAA+AGG | + | tig0021335:4639-4658 | None:intergenic | 25.0% |
| !!! | GAAATTTTCAAGTAATGTCA+TGG | - | tig0021335:4659-4678 | Msa1390350:CDS | 25.0% |
| !! | ATGTTTTTCCCTTTCAATAA+GGG | - | tig0021335:4775-4794 | Msa1390350:CDS | 25.0% |
| !! | TGAAGATCAAAAACTTTTGA+GGG | - | tig0021335:4881-4900 | Msa1390350:CDS | 25.0% |
| ! | TTGAAATATTTCTTTCGCTT+GGG | + | tig0021335:5058-5077 | None:intergenic | 25.0% |
| !! | TTTGAAATATTTCTTTCGCT+TGG | + | tig0021335:5059-5078 | None:intergenic | 25.0% |
| !! | TCAAATTCAAAACATTTTGG+CGG | + | tig0021335:5396-5415 | None:intergenic | 25.0% |
| ! | AGACAGAATATCTAAATCAA+TGG | + | tig0021335:5608-5627 | None:intergenic | 25.0% |
| ! | AGAGAACAAAAATAAAGGAA+TGG | + | tig0021335:5979-5998 | None:intergenic | 25.0% |
| !!! | TGCTTATATTTGTTTTACTC+TGG | - | tig0021335:6206-6225 | Msa1390350:intron | 25.0% |
| !!! | GAATTTTAAAGACCAAGAAT+GGG | - | tig0021335:6430-6449 | Msa1390350:intron | 25.0% |
| !! | AATATTATGCTCAAAAGTAC+TGG | - | tig0021335:6533-6552 | Msa1390350:intron | 25.0% |
| ! | AAGTTAAGAGATAAAGTTTC+TGG | + | tig0021335:6804-6823 | None:intergenic | 25.0% |
| ! | TGGTGCTTAATTAGAAATTA+TGG | - | tig0021335:6947-6966 | Msa1390350:intron | 25.0% |
| ! | GGTGCTTAATTAGAAATTAT+GGG | - | tig0021335:6948-6967 | Msa1390350:intron | 25.0% |
| ! | TTTCACTCATAATAATCTGA+CGG | + | tig0021335:6994-7013 | None:intergenic | 25.0% |
| ! | TCAGATTATTATGAGTGAAA+AGG | - | tig0021335:6994-7013 | Msa1390350:intron | 25.0% |
| GGGTTTATAATAAACGAGTT+TGG | + | tig0021335:1057-1076 | None:intergenic | 30.0% | |
| GTTACTTCGTTGAATTGTTA+TGG | - | tig0021335:1414-1433 | Msa1390350:CDS | 30.0% | |
| ! | ATTGTGATGGAATTTCCAAT+CGG | - | tig0021335:1472-1491 | Msa1390350:CDS | 30.0% |
| ! | TTTGTTTGGTGAGAAAGTTT+CGG | - | tig0021335:1677-1696 | Msa1390350:CDS | 30.0% |
| GGAGAAAAGTTGAATATTGA+AGG | + | tig0021335:1710-1729 | None:intergenic | 30.0% | |
| ! | GTAATTACATGTGTTGGTAT+CGG | - | tig0021335:2209-2228 | Msa1390350:CDS | 30.0% |
| GACATAAACGTATATGCATT+TGG | + | tig0021335:2338-2357 | None:intergenic | 30.0% | |
| GTGCATTTGAATCCAAAAAT+AGG | + | tig0021335:2434-2453 | None:intergenic | 30.0% | |
| !!! | TAATTTTTTGGTGTTCTGGA+TGG | - | tig0021335:2519-2538 | Msa1390350:intron | 30.0% |
| ! | TCAGTCCTTTTCTTTATCAT+TGG | - | tig0021335:2552-2571 | Msa1390350:intron | 30.0% |
| !! | CACAAACTTCTGAAATTTGA+TGG | - | tig0021335:2691-2710 | Msa1390350:intron | 30.0% |
| ! | TGATTTTCTGCTTTCTTGAT+AGG | - | tig0021335:2914-2933 | Msa1390350:CDS | 30.0% |
| AAGATCGATTACAAAGAGTA+TGG | - | tig0021335:3364-3383 | Msa1390350:intron | 30.0% | |
| AAATTACACATGTTACATGG+CGG | - | tig0021335:3429-3448 | Msa1390350:intron | 30.0% | |
| ! | CTCCAAATTTTATATTGAGC+AGG | - | tig0021335:3479-3498 | Msa1390350:CDS | 30.0% |
| TGCCTGCTCAATATAAAATT+TGG | + | tig0021335:3484-3503 | None:intergenic | 30.0% | |
| !!! | AAAAAACCTTGCTAGTTTTC+TGG | + | tig0021335:3604-3623 | None:intergenic | 30.0% |
| ! | GCATATTCTGTTGTTAGTTT+AGG | - | tig0021335:3646-3665 | Msa1390350:CDS | 30.0% |
| TGAGTAAAGCAGTGAAATTA+AGG | + | tig0021335:3675-3694 | None:intergenic | 30.0% | |
| ! | TTACTCAGTTGTAGTCATTT+TGG | - | tig0021335:3688-3707 | Msa1390350:CDS | 30.0% |
| !! | AATTTACTTCTTTAAGGTGC+TGG | - | tig0021335:3814-3833 | Msa1390350:CDS | 30.0% |
| AGCTAGTATAATAATTGGCA+GGG | + | tig0021335:4037-4056 | None:intergenic | 30.0% | |
| AAGCTAGTATAATAATTGGC+AGG | + | tig0021335:4038-4057 | None:intergenic | 30.0% | |
| TGCCAATTATTATACTAGCT+TGG | - | tig0021335:4037-4056 | Msa1390350:intron | 30.0% | |
| ACATTGATCACCTTCTTAAA+CGG | - | tig0021335:4063-4082 | Msa1390350:intron | 30.0% | |
| !!! | ACTGTATCTGATTTTTTTGC+CGG | + | tig0021335:4137-4156 | None:intergenic | 30.0% |
| ATAGCTTATCTAGGTTATCA+AGG | - | tig0021335:4171-4190 | Msa1390350:CDS | 30.0% | |
| GCTGATAAAGATTATACAAG+AGG | - | tig0021335:4322-4341 | Msa1390350:CDS | 30.0% | |
| !! | CTCGTATTTGAATTGTTTTG+TGG | - | tig0021335:4439-4458 | Msa1390350:CDS | 30.0% |
| !! | ATTTGAATTGTTTTGTGGTC+TGG | - | tig0021335:4444-4463 | Msa1390350:CDS | 30.0% |
| ! | GATGTTTTTCCCTTTCAATA+AGG | - | tig0021335:4774-4793 | Msa1390350:CDS | 30.0% |
| ! | TGTTTTTCCCTTTCAATAAG+GGG | - | tig0021335:4776-4795 | Msa1390350:CDS | 30.0% |
| AAGAAAACCCCTTATTGAAA+GGG | + | tig0021335:4786-4805 | None:intergenic | 30.0% | |
| TGCAATAAGAAAGCAGTTAA+GGG | + | tig0021335:4809-4828 | None:intergenic | 30.0% | |
| TTGCAATAAGAAAGCAGTTA+AGG | + | tig0021335:4810-4829 | None:intergenic | 30.0% | |
| ! | CTGAAGATCAAAAACTTTTG+AGG | - | tig0021335:4880-4899 | Msa1390350:CDS | 30.0% |
| !! | TCAAAAACTTTTGAGGGAAA+AGG | - | tig0021335:4887-4906 | Msa1390350:CDS | 30.0% |
| ATCTAGATCCTTAAGAGTAA+AGG | - | tig0021335:4971-4990 | Msa1390350:intron | 30.0% | |
| !! | AGTGTCACTTTCCTTAAAAA+GGG | + | tig0021335:5114-5133 | None:intergenic | 30.0% |
| !! | AAGTGTCACTTTCCTTAAAA+AGG | + | tig0021335:5115-5134 | None:intergenic | 30.0% |
| TGAGTATTTGAACTGGTAAT+AGG | + | tig0021335:5164-5183 | None:intergenic | 30.0% | |
| TAATATAACATCAAAGGCCT+CGG | + | tig0021335:5329-5348 | None:intergenic | 30.0% | |
| ATTCTCATTCACTCTTAATC+TGG | - | tig0021335:5416-5435 | Msa1390350:CDS | 30.0% | |
| TGAATAATCTGGTCATAGTT+GGG | + | tig0021335:5514-5533 | None:intergenic | 30.0% | |
| TTGAATAATCTGGTCATAGT+TGG | + | tig0021335:5515-5534 | None:intergenic | 30.0% | |
| TGATTTAGATATTCTGTCTC+AGG | - | tig0021335:5609-5628 | Msa1390350:CDS | 30.0% | |
| !! | TATCTAAAGGTGCTTAAATC+AGG | - | tig0021335:5726-5745 | Msa1390350:CDS | 30.0% |
| ! | AAAAGTCGAGAATTTTTCCA+AGG | + | tig0021335:5770-5789 | None:intergenic | 30.0% |
| TGTTTGATTCATCTCTAGAT+TGG | + | tig0021335:5887-5906 | None:intergenic | 30.0% | |
| AATGCCTTTGCAAACAAATA+TGG | - | tig0021335:6347-6366 | Msa1390350:intron | 30.0% | |
| AGATCCATATTTGTTTGCAA+AGG | + | tig0021335:6354-6373 | None:intergenic | 30.0% | |
| ATTAGAAGAAAGCCATCTAA+GGG | + | tig0021335:6408-6427 | None:intergenic | 30.0% | |
| AATTAGAAGAAAGCCATCTA+AGG | + | tig0021335:6409-6428 | None:intergenic | 30.0% | |
| TTAGATGGCTTTCTTCTAAT+TGG | - | tig0021335:6408-6427 | Msa1390350:intron | 30.0% | |
| !! | GGAATTTTAAAGACCAAGAA+TGG | - | tig0021335:6429-6448 | Msa1390350:intron | 30.0% |
| ! | GTTTTCTGTTACATACTTTG+AGG | - | tig0021335:6632-6651 | Msa1390350:CDS | 30.0% |
| AAGTTAGTAAGTGGAATATC+TGG | - | tig0021335:6759-6778 | Msa1390350:intron | 30.0% | |
| AGATTATTGTGATATCCACA+AGG | - | tig0021335:6859-6878 | Msa1390350:intron | 30.0% | |
| ! | TAATCATGCTATTTACCTTG+TGG | + | tig0021335:6877-6896 | None:intergenic | 30.0% |
| TAGCATGATTATTTGTGTCA+AGG | - | tig0021335:6886-6905 | Msa1390350:intron | 30.0% | |
| TTACACACATATATGTGCAT+AGG | - | tig0021335:7491-7510 | Msa1390350:five_prime_UTR | 30.0% | |
| TCCTGTAAAGTTTAGTGATA+TGG | - | tig0021335:7547-7566 | Msa1390350:five_prime_UTR | 30.0% | |
| ACCATATCACTAAACTTTAC+AGG | + | tig0021335:7551-7570 | None:intergenic | 30.0% | |
| ! | AAAAGGTGAAGGACTTGTTT+GGG | + | tig0021335:1077-1096 | None:intergenic | 35.0% |
| ! | AAAAAGGTGAAGGACTTGTT+TGG | + | tig0021335:1078-1097 | None:intergenic | 35.0% |
| ACTTCGTTGAATTGTTATGG+CGG | - | tig0021335:1417-1436 | Msa1390350:CDS | 35.0% | |
| CTCAATACAGGAAAACTTTC+AGG | + | tig0021335:1969-1988 | None:intergenic | 35.0% | |
| CTATGAGAAACTTTCAAGCA+AGG | - | tig0021335:1999-2018 | Msa1390350:CDS | 35.0% | |
| TGTAGCACAAGTCACATAAA+TGG | + | tig0021335:2878-2897 | None:intergenic | 35.0% | |
| GATTGAGAGAAGGAAAAAGA+AGG | - | tig0021335:3332-3351 | Msa1390350:intron | 35.0% | |
| AAGGAAAAAGAAGGATGAGT+TGG | - | tig0021335:3341-3360 | Msa1390350:intron | 35.0% | |
| GACAAAGAGCTGAATATATC+AGG | - | tig0021335:3508-3527 | Msa1390350:CDS | 35.0% | |
| TTGGATTACAATGTCAAAGC+AGG | - | tig0021335:3566-3585 | Msa1390350:CDS | 35.0% | |
| ATCTTTCCAGAAAACTAGCA+AGG | - | tig0021335:3595-3614 | Msa1390350:CDS | 35.0% | |
| !! | AGTTGTAGTCATTTTGGAGA+AGG | - | tig0021335:3694-3713 | Msa1390350:CDS | 35.0% |
| CATTGATCACCTTCTTAAAC+GGG | - | tig0021335:4064-4083 | Msa1390350:intron | 35.0% | |
| !!! | CTGTATCTGATTTTTTTGCC+GGG | + | tig0021335:4136-4155 | None:intergenic | 35.0% |
| ATTGTACTGAAAACTGCATC+TGG | + | tig0021335:4242-4261 | None:intergenic | 35.0% | |
| ! | AGATGCAGTTTTCAGTACAA+TGG | - | tig0021335:4241-4260 | Msa1390350:CDS | 35.0% |
| ! | GATGCAGTTTTCAGTACAAT+GGG | - | tig0021335:4242-4261 | Msa1390350:CDS | 35.0% |
| AACAAATTCTTGAGCAGACT+TGG | + | tig0021335:4288-4307 | None:intergenic | 35.0% | |
| !!! | TTGCTGCTTTTGATAAAGCA+TGG | - | tig0021335:4414-4433 | Msa1390350:CDS | 35.0% |
| ACTTGCAAGTTAACTTCAGA+AGG | - | tig0021335:4542-4561 | Msa1390350:CDS | 35.0% | |
| AAGTTAACTTCAGAAGGAGT+TGG | - | tig0021335:4548-4567 | Msa1390350:CDS | 35.0% | |
| TATGAAAGCTATTCAGCATC+AGG | - | tig0021335:4583-4602 | Msa1390350:CDS | 35.0% | |
| AAAACTCACAGCTATTGACA+TGG | + | tig0021335:4616-4635 | None:intergenic | 35.0% | |
| ! | CTGTGAGTTTTCCTTTTCAA+TGG | - | tig0021335:4625-4644 | Msa1390350:CDS | 35.0% |
| ! | AATCTTACAGTCAGCTTTTG+AGG | + | tig0021335:4696-4715 | None:intergenic | 35.0% |
| GAAGAAAACCCCTTATTGAA+AGG | + | tig0021335:4787-4806 | None:intergenic | 35.0% | |
| TCCTTAAGAGTAAAGGATAG+CGG | - | tig0021335:4978-4997 | Msa1390350:intron | 35.0% | |
| TCATTTACAAGAACCTCGTT+TGG | + | tig0021335:5218-5237 | None:intergenic | 35.0% | |
| AATATAACATCAAAGGCCTC+GGG | + | tig0021335:5328-5347 | None:intergenic | 35.0% | |
| CGGGGATAATATAACATCAA+AGG | + | tig0021335:5335-5354 | None:intergenic | 35.0% | |
| !! | AAACATTTTGGCGGTAATGA+AGG | + | tig0021335:5387-5406 | None:intergenic | 35.0% |
| GGGTAAAATCAAACAGACAA+TGG | - | tig0021335:5441-5460 | Msa1390350:CDS | 35.0% | |
| AATCAAACAGACAATGGAGA+AGG | - | tig0021335:5447-5466 | Msa1390350:CDS | 35.0% | |
| TTCCATAACACTATCCCAAA+AGG | + | tig0021335:5473-5492 | None:intergenic | 35.0% | |
| TGTTATGGAATCTGTTAAGC+AGG | - | tig0021335:5483-5502 | Msa1390350:CDS | 35.0% | |
| TGACCAGATTATTCAACTCA+TGG | - | tig0021335:5519-5538 | Msa1390350:CDS | 35.0% | |
| ! | CTTCCATGAGTTGAATAATC+TGG | + | tig0021335:5525-5544 | None:intergenic | 35.0% |
| GATTATTCAACTCATGGAAG+AGG | - | tig0021335:5525-5544 | Msa1390350:CDS | 35.0% | |
| TAGGGATGAAATTTGTGAGA+TGG | - | tig0021335:5549-5568 | Msa1390350:CDS | 35.0% | |
| ATATCATCCTTCCAGCTTAT+TGG | + | tig0021335:5577-5596 | None:intergenic | 35.0% | |
| ATCTCTCTCTGTGTATCTAA+AGG | - | tig0021335:5713-5732 | Msa1390350:CDS | 35.0% | |
| TTTATTATCTCCTCATTGGC+TGG | + | tig0021335:5822-5841 | None:intergenic | 35.0% | |
| AGCCAATGAGGAGATAATAA+AGG | - | tig0021335:5821-5840 | Msa1390350:intron | 35.0% | |
| GATAATAAAGGCCAAACACA+AGG | - | tig0021335:5833-5852 | Msa1390350:intron | 35.0% | |
| ! | GCAGCTATATATGAAAGCAT+TGG | + | tig0021335:6096-6115 | None:intergenic | 35.0% |
| ! | TGTACAGTGCAACTATTTTG+TGG | + | tig0021335:6151-6170 | None:intergenic | 35.0% |
| CAAAGCACGCATAAGATTAA+TGG | - | tig0021335:6283-6302 | Msa1390350:intron | 35.0% | |
| ATTAATGGAGCCTTTGCTTA+AGG | - | tig0021335:6298-6317 | Msa1390350:intron | 35.0% | |
| TTAATGGAGCCTTTGCTTAA+GGG | - | tig0021335:6299-6318 | Msa1390350:intron | 35.0% | |
| CCTTTAGTATTTGAACCATC+AGG | + | tig0021335:6578-6597 | None:intergenic | 35.0% | |
| CCTGATGGTTCAAATACTAA+AGG | - | tig0021335:6575-6594 | Msa1390350:intron | 35.0% | |
| !! | TTTGAGGCAGACACTTATTT+TGG | - | tig0021335:6648-6667 | Msa1390350:CDS | 35.0% |
| TGGTCAAATAAAGTACAGTC+AGG | + | tig0021335:6676-6695 | None:intergenic | 35.0% | |
| ! | TGACTGTACTTTATTTGACC+AGG | - | tig0021335:6675-6694 | Msa1390350:CDS | 35.0% |
| ! | AACCAATTGATCTTGTTGTG+AGG | - | tig0021335:6724-6743 | Msa1390350:CDS | 35.0% |
| !! | AGTTTCTGGTAGATCATCTT+GGG | + | tig0021335:6790-6809 | None:intergenic | 35.0% |
| !! | AAGTTTCTGGTAGATCATCT+TGG | + | tig0021335:6791-6810 | None:intergenic | 35.0% |
| TAATCTTCTGAATTTGAGCC+TGG | + | tig0021335:6845-6864 | None:intergenic | 35.0% | |
| !!! | GCTTTTGTTTTTCTCTCTTC+TGG | - | tig0021335:6921-6940 | Msa1390350:intron | 35.0% |
| CAATATCAGCATCTTCAACA+CGG | + | tig0021335:7090-7109 | None:intergenic | 35.0% | |
| GCTGATATTGAAGACATTGT+AGG | - | tig0021335:7100-7119 | Msa1390350:intron | 35.0% | |
| AAATGGCACTACTGAAAGTT+GGG | - | tig0021335:7320-7339 | Msa1390350:five_prime_UTR | 35.0% | |
| ! | ACTATATCAGTTGGTGTTCA+CGG | - | tig0021335:7400-7419 | Msa1390350:five_prime_UTR | 35.0% |
| AGTTGTAAGCTGTTCATCTT+AGG | - | tig0021335:7523-7542 | Msa1390350:five_prime_UTR | 35.0% | |
| GATCGTAACAAACTCCGTAA+CGG | + | tig0021335:1394-1413 | None:intergenic | 40.0% | |
| GAATTACCGGAGGGTAAAAA+CGG | - | tig0021335:1448-1467 | Msa1390350:CDS | 40.0% | |
| !! | ACAATTCCGTTTTTACCCTC+CGG | + | tig0021335:1457-1476 | None:intergenic | 40.0% |
| GGGTAAAAACGGAATTGTGA+TGG | - | tig0021335:1459-1478 | Msa1390350:CDS | 40.0% | |
| AGAGATTCATCATCTCCGAT+TGG | + | tig0021335:1490-1509 | None:intergenic | 40.0% | |
| TCATGCTCAAATTCGTAGAC+AGG | - | tig0021335:1609-1628 | Msa1390350:CDS | 40.0% | |
| CTTTGCGTGTTTCGTTTGTT+TGG | - | tig0021335:1663-1682 | Msa1390350:CDS | 40.0% | |
| AGTACTTCTGCACTCAATAC+AGG | + | tig0021335:1981-2000 | None:intergenic | 40.0% | |
| ATAAGAGCAAGACCAAAGCA+TGG | + | tig0021335:2129-2148 | None:intergenic | 40.0% | |
| ! | ATGTGTTGGTATCGGATAGT+TGG | - | tig0021335:2217-2236 | Msa1390350:CDS | 40.0% |
| ATAGTGACATGTGTAGGACA+TGG | - | tig0021335:2246-2265 | Msa1390350:CDS | 40.0% | |
| GACTCGAGAGAGCAAATATA+AGG | - | tig0021335:3167-3186 | Msa1390350:CDS | 40.0% | |
| !!! | CTGAAGTCGTTTTGATTCAG+CGG | + | tig0021335:3229-3248 | None:intergenic | 40.0% |
| ATCAAAACGACTTCAGTTGC+TGG | - | tig0021335:3233-3252 | Msa1390350:CDS | 40.0% | |
| AGGCAAAACTGAAGTGCAAT+AGG | - | tig0021335:3765-3784 | Msa1390350:CDS | 40.0% | |
| !! | TTACTTCTTTAAGGTGCTGG+AGG | - | tig0021335:3817-3836 | Msa1390350:CDS | 40.0% |
| AACAACCTTTACCTTGACGA+AGG | - | tig0021335:3860-3879 | Msa1390350:intron | 40.0% | |
| ATATGCCTTCGTCAAGGTAA+AGG | + | tig0021335:3868-3887 | None:intergenic | 40.0% | |
| AGAAGAGCAAACTGCTCAAA+TGG | + | tig0021335:3930-3949 | None:intergenic | 40.0% | |
| TCAGACTGTGAAAACTTTGC+TGG | - | tig0021335:3971-3990 | Msa1390350:intron | 40.0% | |
| TAGAAGTTCTACAAGAAGCC+CGG | - | tig0021335:4115-4134 | Msa1390350:intron | 40.0% | |
| !! | GAATTGTTTTGTGGTCTGGA+AGG | - | tig0021335:4448-4467 | Msa1390350:CDS | 40.0% |
| ! | TTTTGTGGTCTGGAAGGTTA+AGG | - | tig0021335:4454-4473 | Msa1390350:CDS | 40.0% |
| ! | TCGATCTTTGGAGGATGATT+TGG | - | tig0021335:4481-4500 | Msa1390350:CDS | 40.0% |
| TCCGCTATCCTTTACTCTTA+AGG | + | tig0021335:4982-5001 | None:intergenic | 40.0% | |
| !! | TTGGAGTTTGGCTTGTCATT+GGG | + | tig0021335:5007-5026 | None:intergenic | 40.0% |
| CAACAGTAGAAAGTGGAGTT+GGG | + | tig0021335:5031-5050 | None:intergenic | 40.0% | |
| AAGAGAAGCTTGACTCTATG+GGG | + | tig0021335:5139-5158 | None:intergenic | 40.0% | |
| GAAGAGAAGCTTGACTCTAT+GGG | + | tig0021335:5140-5159 | None:intergenic | 40.0% | |
| ACTGAGCTGAGTATTTGAAC+TGG | + | tig0021335:5171-5190 | None:intergenic | 40.0% | |
| AAAGTTTGTAGCACCAAACG+AGG | - | tig0021335:5202-5221 | Msa1390350:CDS | 40.0% | |
| CAAAGCCATCAGCAAAACTA+CGG | + | tig0021335:5259-5278 | None:intergenic | 40.0% | |
| TCACATTCAAAACAGCGTTG+AGG | - | tig0021335:5289-5308 | Msa1390350:intron | 40.0% | |
| TCATTCACTCTTAATCTGGC+AGG | - | tig0021335:5420-5439 | Msa1390350:CDS | 40.0% | |
| CATTCACTCTTAATCTGGCA+GGG | - | tig0021335:5421-5440 | Msa1390350:CDS | 40.0% | |
| TTCAACTCATGGAAGAGGTT+AGG | - | tig0021335:5530-5549 | Msa1390350:CDS | 40.0% | |
| TCAACTCATGGAAGAGGTTA+GGG | - | tig0021335:5531-5550 | Msa1390350:CDS | 40.0% | |
| GGCCTTTATTATCTCCTCAT+TGG | + | tig0021335:5826-5845 | None:intergenic | 40.0% | |
| GCATAGTAATGCCTTGTGTT+TGG | + | tig0021335:5847-5866 | None:intergenic | 40.0% | |
| ! | ATGTGTTGTAGCCTTGGTTA+AGG | - | tig0021335:5911-5930 | Msa1390350:intron | 40.0% |
| ! | TGTGTTGTAGCCTTGGTTAA+GGG | - | tig0021335:5912-5931 | Msa1390350:intron | 40.0% |
| AAACTGCAAACCCTTAACCA+AGG | + | tig0021335:5925-5944 | None:intergenic | 40.0% | |
| GTTTGTCCTTGAACAGATTC+AGG | - | tig0021335:5941-5960 | Msa1390350:intron | 40.0% | |
| GAGGTGCAGTTTACTCATTA+AGG | + | tig0021335:6182-6201 | None:intergenic | 40.0% | |
| !! | TGTTTGCAAAGGCATTCCTA+AGG | + | tig0021335:6343-6362 | None:intergenic | 40.0% |
| TCACATGTTCTTCCCATTCT+TGG | + | tig0021335:6445-6464 | None:intergenic | 40.0% | |
| TGAATTATCAGCCAATGCTG+AGG | + | tig0021335:6474-6493 | None:intergenic | 40.0% | |
| TTGGCTGATAATTCATCCCA+AGG | - | tig0021335:6479-6498 | Msa1390350:intron | 40.0% | |
| TGGCTGATAATTCATCCCAA+GGG | - | tig0021335:6480-6499 | Msa1390350:intron | 40.0% | |
| CTTCAACTACTCTCAGAACT+GGG | - | tig0021335:6507-6526 | Msa1390350:intron | 40.0% | |
| TTCAACTACTCTCAGAACTG+GGG | - | tig0021335:6508-6527 | Msa1390350:intron | 40.0% | |
| ! | ATTGGTTCTCCTTTGCATTC+TGG | + | tig0021335:6711-6730 | None:intergenic | 40.0% |
| AGCCTCACAACAAGATCAAT+TGG | + | tig0021335:6729-6748 | None:intergenic | 40.0% | |
| ! | ATTGATCTTGTTGTGAGGCT+TGG | - | tig0021335:6729-6748 | Msa1390350:CDS | 40.0% |
| !! | GGTTTGCTGAAGTTAGTAAG+TGG | - | tig0021335:6750-6769 | Msa1390350:intron | 40.0% |
| TAGTTGCTGCCAGAATGTTA+GGG | - | tig0021335:7185-7204 | Msa1390350:CDS | 40.0% | |
| TAAGCTCTTCCCTAACATTC+TGG | + | tig0021335:7197-7216 | None:intergenic | 40.0% | |
| TGGGAGGAAATTAGCTGAAA+TGG | - | tig0021335:7303-7322 | Msa1390350:exon | 40.0% | |
| GAAATGGCACTACTGAAAGT+TGG | - | tig0021335:7319-7338 | Msa1390350:five_prime_UTR | 40.0% | |
| AATGGCACTACTGAAAGTTG+GGG | - | tig0021335:7321-7340 | Msa1390350:five_prime_UTR | 40.0% | |
| GTGAACACCAACTGATATAG+TGG | + | tig0021335:7401-7420 | None:intergenic | 40.0% | |
| ! | CTATATCAGTTGGTGTTCAC+GGG | - | tig0021335:7401-7420 | Msa1390350:five_prime_UTR | 40.0% |
| AACGGTAGCAGATTCCGTAA+CGG | + | tig0021335:1376-1395 | None:intergenic | 45.0% | |
| TACGGAATCTGCTACCGTTA+CGG | - | tig0021335:1377-1396 | Msa1390350:CDS | 45.0% | |
| TCGTTGAATTGTTATGGCGG+CGG | - | tig0021335:1420-1439 | Msa1390350:CDS | 45.0% | |
| TGATGAATCTCTGTCATCGC+CGG | - | tig0021335:1498-1517 | Msa1390350:CDS | 45.0% | |
| AGTCGTTTCGGTAATCTCAC+CGG | + | tig0021335:1520-1539 | None:intergenic | 45.0% | |
| TCGATTTCTTCCACCGAACT+CGG | + | tig0021335:1577-1596 | None:intergenic | 45.0% | |
| GAACATCGTGAAGGACTTCT+TGG | + | tig0021335:2036-2055 | None:intergenic | 45.0% | |
| TCCTTCACGATGTTCATCTC+AGG | - | tig0021335:2041-2060 | Msa1390350:intron | 45.0% | |
| TCCTGAGATGAACATCGTGA+AGG | + | tig0021335:2045-2064 | None:intergenic | 45.0% | |
| ACGATGTTCATCTCAGGATG+AGG | - | tig0021335:2047-2066 | Msa1390350:intron | 45.0% | |
| TCATCTCAGGATGAGGATCT+TGG | - | tig0021335:2054-2073 | Msa1390350:intron | 45.0% | |
| ! | TGGTATCGGATAGTTGGTCT+CGG | - | tig0021335:2223-2242 | Msa1390350:CDS | 45.0% |
| TCTCGGATAGTGACATGTGT+AGG | - | tig0021335:2240-2259 | Msa1390350:CDS | 45.0% | |
| ACATGTGTAGGACATGGACA+TGG | - | tig0021335:2252-2271 | Msa1390350:CDS | 45.0% | |
| CATGTGTAGGACATGGACAT+GGG | - | tig0021335:2253-2272 | Msa1390350:CDS | 45.0% | |
| !! | CACTTTCCATCAGAAGTGTC+CGG | - | tig0021335:2279-2298 | Msa1390350:CDS | 45.0% |
| !! | TAGGTTGAGCCTTTTGACGA+AGG | - | tig0021335:2933-2952 | Msa1390350:CDS | 45.0% |
| !! | TTTTAGCTGCTTGACGCAGT+TGG | + | tig0021335:2984-3003 | None:intergenic | 45.0% |
| CTGCGTCAAGCAGCTAAAAA+TGG | - | tig0021335:2985-3004 | Msa1390350:CDS | 45.0% | |
| !! | GAAGGGCATCTCTTAGAGAA+AGG | - | tig0021335:3118-3137 | Msa1390350:CDS | 45.0% |
| GGTCATCTCAGTCATTGATG+AGG | - | tig0021335:3139-3158 | Msa1390350:CDS | 45.0% | |
| ATGTTACATGGCGGTCTTAG+TGG | - | tig0021335:3438-3457 | Msa1390350:CDS | 45.0% | |
| GCTGAATATATCAGGCAGAG+AGG | - | tig0021335:3516-3535 | Msa1390350:CDS | 45.0% | |
| GTGGTTATGCGTTCGAGAAT+TGG | - | tig0021335:3547-3566 | Msa1390350:CDS | 45.0% | |
| CTGTGAAAACTTTGCTGGAC+CGG | - | tig0021335:3976-3995 | Msa1390350:intron | 45.0% | |
| CAACAGCTGTAAACACTCTG+AGG | + | tig0021335:4013-4032 | None:intergenic | 45.0% | |
| GGGCTTCTTGTAGAACTTCT+AGG | + | tig0021335:4116-4135 | None:intergenic | 45.0% | |
| GGTTAAGGATGCTCGATCTT+TGG | - | tig0021335:4469-4488 | Msa1390350:CDS | 45.0% | |
| TAAGGATGCTCGATCTTTGG+AGG | - | tig0021335:4472-4491 | Msa1390350:CDS | 45.0% | |
| TATTGCAAGAGCGAACGCTT+TGG | - | tig0021335:4822-4841 | Msa1390350:CDS | 45.0% | |
| !! | CTTGGAGTTTGGCTTGTCAT+TGG | + | tig0021335:5008-5027 | None:intergenic | 45.0% |
| GCAACAGTAGAAAGTGGAGT+TGG | + | tig0021335:5032-5051 | None:intergenic | 45.0% | |
| TAAAAAGGGAGCGAACCACT+CGG | + | tig0021335:5100-5119 | None:intergenic | 45.0% | |
| ! | AGTGGTTCGCTCCCTTTTTA+AGG | - | tig0021335:5100-5119 | Msa1390350:intron | 45.0% |
| AGAGAAGCTTGACTCTATGG+GGG | + | tig0021335:5138-5157 | None:intergenic | 45.0% | |
| CGAAGAGAAGCTTGACTCTA+TGG | + | tig0021335:5141-5160 | None:intergenic | 45.0% | |
| CAAAACTACGGTGATGCTCA+TGG | + | tig0021335:5247-5266 | None:intergenic | 45.0% | |
| !! | CATCACCGTAGTTTTGCTGA+TGG | - | tig0021335:5251-5270 | Msa1390350:intron | 45.0% |
| ! | CAAAACAGCGTTGAGGTAAG+AGG | - | tig0021335:5296-5315 | Msa1390350:intron | 45.0% |
| ! | AGACAATGGAGAAGGCCTTT+TGG | - | tig0021335:5455-5474 | Msa1390350:CDS | 45.0% |
| ! | GACAATGGAGAAGGCCTTTT+GGG | - | tig0021335:5456-5475 | Msa1390350:CDS | 45.0% |
| !!! | GGCCTTTTGGGATAGTGTTA+TGG | - | tig0021335:5468-5487 | Msa1390350:CDS | 45.0% |
| GGTGCTTAAATCAGGTCAAC+TGG | - | tig0021335:5734-5753 | Msa1390350:CDS | 45.0% | |
| ! | CAACTGGATGTCGATTACCT+TGG | - | tig0021335:5750-5769 | Msa1390350:CDS | 45.0% |
| CAATGCATGTGTTGTAGCCT+TGG | - | tig0021335:5905-5924 | Msa1390350:intron | 45.0% | |
| GACACACCTGAATCTGTTCA+AGG | + | tig0021335:5950-5969 | None:intergenic | 45.0% | |
| !! | AGAGAGGTACTAGCATCAGA+TGG | + | tig0021335:6377-6396 | None:intergenic | 45.0% |
| TCTAAGGGTCAAAGGAAGAG+AGG | + | tig0021335:6393-6412 | None:intergenic | 45.0% | |
| CTCTTCCTTTGACCCTTAGA+TGG | - | tig0021335:6393-6412 | Msa1390350:intron | 45.0% | |
| GAAAGCCATCTAAGGGTCAA+AGG | + | tig0021335:6401-6420 | None:intergenic | 45.0% | |
| TGTGAATTCCTCCTCAGCAT+TGG | - | tig0021335:6460-6479 | Msa1390350:intron | 45.0% | |
| ATTATCAGCCAATGCTGAGG+AGG | + | tig0021335:6471-6490 | None:intergenic | 45.0% | |
| AGTAGTTGAAGGAAGCCCTT+GGG | + | tig0021335:6498-6517 | None:intergenic | 45.0% | |
| !! | CCAGTTCTGAGAGTAGTTGA+AGG | + | tig0021335:6509-6528 | None:intergenic | 45.0% |
| CCTTCAACTACTCTCAGAAC+TGG | - | tig0021335:6506-6525 | Msa1390350:intron | 45.0% | |
| TCAACTACTCTCAGAACTGG+GGG | - | tig0021335:6509-6528 | Msa1390350:intron | 45.0% | |
| !! | CAAAAGTACTGGCAGTCCAA+TGG | - | tig0021335:6544-6563 | Msa1390350:intron | 45.0% |
| CCATCAGGAGAAAAGACCAT+TGG | + | tig0021335:6563-6582 | None:intergenic | 45.0% | |
| ! | CCAATGGTCTTTTCTCCTGA+TGG | - | tig0021335:6560-6579 | Msa1390350:intron | 45.0% |
| GATCAGCAACCAGAATGCAA+AGG | - | tig0021335:6699-6718 | Msa1390350:CDS | 45.0% | |
| ! | GTTTTTCTCTCTTCTGGCGA+TGG | - | tig0021335:6927-6946 | Msa1390350:intron | 45.0% |
| AGTAGCAAGCTCTGCAGATA+TGG | - | tig0021335:7018-7037 | Msa1390350:intron | 45.0% | |
| CAAGAGTTGTTCTGCACACT+TGG | + | tig0021335:7056-7075 | None:intergenic | 45.0% | |
| CAAGTGTGCAGAACAACTCT+TGG | - | tig0021335:7054-7073 | Msa1390350:intron | 45.0% | |
| TGCAATCTGCCATCAGTTGA+CGG | - | tig0021335:7130-7149 | Msa1390350:CDS | 45.0% | |
| GTAGTTGCTGCCAGAATGTT+AGG | - | tig0021335:7184-7203 | Msa1390350:CDS | 45.0% | |
| TTAGGGAAGAGCTTACAAGC+TGG | - | tig0021335:7202-7221 | Msa1390350:CDS | 45.0% | |
| TAGGGAAGAGCTTACAAGCT+GGG | - | tig0021335:7203-7222 | Msa1390350:CDS | 45.0% | |
| TTCAGCTAATTTCCTCCCAC+TGG | + | tig0021335:7302-7321 | None:intergenic | 45.0% | |
| ! | TGCTCTGACTGAAAGTGTAG+TGG | - | tig0021335:7348-7367 | Msa1390350:five_prime_UTR | 45.0% |
| !!! | AGCTGCTCGTGTTTTGATTG+TGG | - | tig0021335:7372-7391 | Msa1390350:five_prime_UTR | 45.0% |
| ACAAAGCTCTCTCTCGAAGC+TGG | - | tig0021335:1148-1167 | Msa1390350:three_prime_UTR | 50.0% | |
| ! | ATTCCGTAACGGAGCAACGA+CGG | + | tig0021335:1365-1384 | None:intergenic | 50.0% |
| CGTTGAATTGTTATGGCGGC+GGG | - | tig0021335:1421-1440 | Msa1390350:CDS | 50.0% | |
| CCGTATCTAGAAGCCTTCGT+CGG | + | tig0021335:1543-1562 | None:intergenic | 50.0% | |
| CCGACGAAGGCTTCTAGATA+CGG | - | tig0021335:1540-1559 | Msa1390350:CDS | 50.0% | |
| GGAGTGTAAGTCACCGAGTT+CGG | - | tig0021335:1561-1580 | Msa1390350:CDS | 50.0% | |
| GGATCTTGGTCAGCGATTAG+AGG | - | tig0021335:2068-2087 | Msa1390350:intron | 50.0% | |
| AACCCACCTCTTCTGTTCAG+CGG | + | tig0021335:2106-2125 | None:intergenic | 50.0% | |
| ! | AAGAGGTGGGTTCCATGCTT+TGG | - | tig0021335:2114-2133 | Msa1390350:intron | 50.0% |
| CAAATGAGCGCGTGAAGCTT+GGG | - | tig0021335:3025-3044 | Msa1390350:intron | 50.0% | |
| CGTGAAGCTTGGGACAAAAG+TGG | - | tig0021335:3035-3054 | Msa1390350:intron | 50.0% | |
| AGTGGAATCACGTGTTCAGC+AGG | - | tig0021335:3053-3072 | Msa1390350:intron | 50.0% | |
| TGCTTATCCTAAAGGCTCGC+AGG | - | tig0021335:3091-3110 | Msa1390350:intron | 50.0% | |
| TTCTTTGCCTGCGAGCCTTT+AGG | + | tig0021335:3101-3120 | None:intergenic | 50.0% | |
| TAAAGGCTCGCAGGCAAAGA+AGG | - | tig0021335:3100-3119 | Msa1390350:intron | 50.0% | |
| AAAGGCTCGCAGGCAAAGAA+GGG | - | tig0021335:3101-3120 | Msa1390350:intron | 50.0% | |
| ! | ATTCAGCGGCAGCTCGTTTT+TGG | + | tig0021335:3215-3234 | None:intergenic | 50.0% |
| TGCTGGAAGCTGAGAAGAAG+AGG | - | tig0021335:3250-3269 | Msa1390350:CDS | 50.0% | |
| GCTGGAAGCTGAGAAGAAGA+GGG | - | tig0021335:3251-3270 | Msa1390350:CDS | 50.0% | |
| ACCAGCGTGAGATTGAGAGA+AGG | - | tig0021335:3322-3341 | Msa1390350:intron | 50.0% | |
| TCCTTCTCTCAATCTCACGC+TGG | + | tig0021335:3326-3345 | None:intergenic | 50.0% | |
| !! | CTTCTTTAAGGTGCTGGAGG+CGG | - | tig0021335:3820-3839 | Msa1390350:CDS | 50.0% |
| TTTCTCGTTGATCCCCAGCA+CGG | + | tig0021335:3892-3911 | None:intergenic | 50.0% | |
| ! | CAGCTGTAAACACTCTGAGG+CGG | + | tig0021335:4010-4029 | None:intergenic | 50.0% |
| ! | TAGGAGTAGCCCTTTTCCTG+GGG | + | tig0021335:4097-4116 | None:intergenic | 50.0% |
| ! | CTAGGAGTAGCCCTTTTCCT+GGG | + | tig0021335:4098-4117 | None:intergenic | 50.0% |
| ! | TCTAGGAGTAGCCCTTTTCC+TGG | + | tig0021335:4099-4118 | None:intergenic | 50.0% |
| AGCAGCAAGCTGTGATCTGA+AGG | + | tig0021335:4402-4421 | None:intergenic | 50.0% | |
| GAATCATCGAAGCCTCAAGC+TGG | + | tig0021335:4520-4539 | None:intergenic | 50.0% | |
| GAAAAGGTGATGCACCTGAG+TGG | - | tig0021335:4903-4922 | Msa1390350:intron | 50.0% | |
| GTAGAAAGTGGAGTTGGGCT+TGG | + | tig0021335:5026-5045 | None:intergenic | 50.0% | |
| GAGCAATAAGACAAGCCGAG+TGG | - | tig0021335:5082-5101 | Msa1390350:intron | 50.0% | |
| GTGAGATGGCTCCAATAAGC+TGG | - | tig0021335:5563-5582 | Msa1390350:CDS | 50.0% | |
| GATGGCTCCAATAAGCTGGA+AGG | - | tig0021335:5567-5586 | Msa1390350:CDS | 50.0% | |
| GCTTTCTTCTCCAGCCAATG+AGG | - | tig0021335:5809-5828 | Msa1390350:intron | 50.0% | |
| GAGTAGTTGAAGGAAGCCCT+TGG | + | tig0021335:6499-6518 | None:intergenic | 50.0% | |
| ! | CATTCTGGTTGCTGATCACC+TGG | + | tig0021335:6696-6715 | None:intergenic | 50.0% |
| CTCTTAACTTCGCCAGACTG+AGG | - | tig0021335:6814-6833 | Msa1390350:intron | 50.0% | |
| GCATCTTCACCGTCAACTGA+TGG | + | tig0021335:7142-7161 | None:intergenic | 50.0% | |
| TCAGTTGACGGTGAAGATGC+AGG | - | tig0021335:7142-7161 | Msa1390350:CDS | 50.0% | |
| CAGTTGACGGTGAAGATGCA+GGG | - | tig0021335:7143-7162 | Msa1390350:CDS | 50.0% | |
| AGGGAAGGTTCAGTCACGAA+AGG | - | tig0021335:7162-7181 | Msa1390350:CDS | 50.0% | |
| AGGGAAGAGCTTACAAGCTG+GGG | - | tig0021335:7204-7223 | Msa1390350:CDS | 50.0% | |
| TGGGGATGCTGTGTTTGAGA+GGG | - | tig0021335:7222-7241 | Msa1390350:CDS | 50.0% | |
| GCTGTCTATTCAGCTTTGCG+TGG | - | tig0021335:7253-7272 | Msa1390350:CDS | 50.0% | |
| CTTTGCGTGGAGTTGTGCTT+GGG | - | tig0021335:7266-7285 | Msa1390350:CDS | 50.0% | |
| TTTGCGTGGAGTTGTGCTTG+GGG | - | tig0021335:7267-7286 | Msa1390350:CDS | 50.0% | |
| GTGGCAGCCACTATATCAGT+TGG | - | tig0021335:7391-7410 | Msa1390350:five_prime_UTR | 50.0% | |
| AATTGTTATGGCGGCGGGAG+TGG | - | tig0021335:1426-1445 | Msa1390350:CDS | 55.0% | |
| TACCGAAACGACTCCGACGA+AGG | - | tig0021335:1527-1546 | Msa1390350:CDS | 55.0% | |
| AGCCTTCGTCGGAGTCGTTT+CGG | + | tig0021335:1532-1551 | None:intergenic | 55.0% | |
| GTGTAAGTCACCGAGTTCGG+TGG | - | tig0021335:1564-1583 | Msa1390350:CDS | 55.0% | |
| TGCAAGCCGCTGAACAGAAG+AGG | - | tig0021335:2097-2116 | Msa1390350:intron | 55.0% | |
| AAGCCGCTGAACAGAAGAGG+TGG | - | tig0021335:2100-2119 | Msa1390350:intron | 55.0% | |
| AGCCGCTGAACAGAAGAGGT+GGG | - | tig0021335:2101-2120 | Msa1390350:intron | 55.0% | |
| !! | ATCAGAAGTGTCCGGTGCTC+CGG | - | tig0021335:2287-2306 | Msa1390350:CDS | 55.0% |
| TAGATGCAGAACCGGAGCAC+CGG | + | tig0021335:2301-2320 | None:intergenic | 55.0% | |
| GCATCTGGGCCTTCGTCAAA+AGG | + | tig0021335:2945-2964 | None:intergenic | 55.0% | |
| CTGCCTAGCTAAGCGCATCT+GGG | + | tig0021335:2959-2978 | None:intergenic | 55.0% | |
| GCTTCACGCGCTCATTTGCA+TGG | + | tig0021335:3023-3042 | None:intergenic | 55.0% | |
| GCAAATGAGCGCGTGAAGCT+TGG | - | tig0021335:3024-3043 | Msa1390350:intron | 55.0% | |
| ATCACGTGTTCAGCAGGCTG+AGG | - | tig0021335:3059-3078 | Msa1390350:intron | 55.0% | |
| GGTGCACGCTAAAGTCTTGC+AGG | - | tig0021335:3272-3291 | Msa1390350:CDS | 55.0% | |
| AGTCTTGCAGGCGAGACATG+TGG | - | tig0021335:3284-3303 | Msa1390350:CDS | 55.0% | |
| CACGGCATATGCCTTCGTCA+AGG | + | tig0021335:3874-3893 | None:intergenic | 55.0% | |
| ! | ACGAAGGCATATGCCGTGCT+GGG | - | tig0021335:3876-3895 | Msa1390350:intron | 55.0% |
| GGGAGGCAACCCGTTTAAGA+AGG | + | tig0021335:4076-4095 | None:intergenic | 55.0% | |
| ! | AGGAGTAGCCCTTTTCCTGG+GGG | + | tig0021335:4096-4115 | None:intergenic | 55.0% |
| GGGCGAGCGTGAAATTGCTT+TGG | - | tig0021335:4262-4281 | Msa1390350:CDS | 55.0% | |
| TAGAGCAGCTTGCCAGCTTG+AGG | - | tig0021335:4505-4524 | Msa1390350:CDS | 55.0% | |
| ATGCACCTGAGTGGAGATGC+TGG | - | tig0021335:4912-4931 | Msa1390350:intron | 55.0% | |
| TGCACCTGAGTGGAGATGCT+GGG | - | tig0021335:4913-4932 | Msa1390350:intron | 55.0% | |
| CAATCCCAGCATCTCCACTC+AGG | + | tig0021335:4920-4939 | None:intergenic | 55.0% | |
| AGATGCTGGGATTGAGCGCA+TGG | - | tig0021335:4926-4945 | Msa1390350:intron | 55.0% | |
| GTGGAGTTGGGCTTGGAGTT+TGG | + | tig0021335:5019-5038 | None:intergenic | 55.0% | |
| AGGTAAGAGGATTCTGCCCG+AGG | - | tig0021335:5309-5328 | Msa1390350:intron | 55.0% | |
| CCAGCAGGTCCCTTAAGCAA+AGG | + | tig0021335:6311-6330 | None:intergenic | 55.0% | |
| CCTTTGCTTAAGGGACCTGC+TGG | - | tig0021335:6308-6327 | Msa1390350:intron | 55.0% | |
| CTAAGGTAGTCCAGACCAGC+AGG | + | tig0021335:6326-6345 | None:intergenic | 55.0% | |
| ! | CTGCTGGTCTGGACTACCTT+AGG | - | tig0021335:6324-6343 | Msa1390350:intron | 55.0% |
| TGACGGTGAAGATGCAGGGA+AGG | - | tig0021335:7147-7166 | Msa1390350:CDS | 55.0% | |
| CTGGGGATGCTGTGTTTGAG+AGG | - | tig0021335:7221-7240 | Msa1390350:CDS | 55.0% | |
| GCTTTGCGTGGAGTTGTGCT+TGG | - | tig0021335:7265-7284 | Msa1390350:CDS | 55.0% | |
| TTGCGTGGAGTTGTGCTTGG+GGG | - | tig0021335:7268-7287 | Msa1390350:CDS | 55.0% | |
| GAGTTGTGCTTGGGGGAAGT+GGG | - | tig0021335:7275-7294 | Msa1390350:CDS | 55.0% | |
| AGTTGTGCTTGGGGGAAGTG+GGG | - | tig0021335:7276-7295 | Msa1390350:CDS | 55.0% | |
| GCACTACTGAAAGTTGGGGC+TGG | - | tig0021335:7325-7344 | Msa1390350:five_prime_UTR | 55.0% | |
| TCGCCGTCGTTGCTCCGTTA+CGG | - | tig0021335:1359-1378 | Msa1390350:CDS | 60.0% | |
| GCGGGAGTGGAATTACCGGA+GGG | - | tig0021335:1439-1458 | Msa1390350:CDS | 60.0% | |
| !! | GGAGCACCGGACACTTCTGA+TGG | + | tig0021335:2288-2307 | None:intergenic | 60.0% |
| AGGCCCAGATGCGCTTAGCT+AGG | - | tig0021335:2953-2972 | Msa1390350:CDS | 60.0% | |
| CCTGCCTAGCTAAGCGCATC+TGG | + | tig0021335:2960-2979 | None:intergenic | 60.0% | |
| CCAGATGCGCTTAGCTAGGC+AGG | - | tig0021335:2957-2976 | Msa1390350:CDS | 60.0% | |
| AGGCAGAGAGGAAGACTGCG+TGG | - | tig0021335:3528-3547 | Msa1390350:CDS | 60.0% | |
| ! | GACGAAGGCATATGCCGTGC+TGG | - | tig0021335:3875-3894 | Msa1390350:intron | 60.0% |
| ! | CGAAGGCATATGCCGTGCTG+GGG | - | tig0021335:3877-3896 | Msa1390350:intron | 60.0% |
| !! | CTCTGAGGCGGCTCTCAAAC+CGG | + | tig0021335:3998-4017 | None:intergenic | 60.0% |
| !! | TTAAACGGGTTGCCTCCCCC+AGG | - | tig0021335:4078-4097 | Msa1390350:intron | 60.0% |
| GGTTGCCTCCCCCAGGAAAA+GGG | - | tig0021335:4085-4104 | Msa1390350:intron | 60.0% | |
| ! | AGTAGCCCTTTTCCTGGGGG+AGG | + | tig0021335:4093-4112 | None:intergenic | 60.0% |
| GCTTAAGGGACCTGCTGGTC+TGG | - | tig0021335:6313-6332 | Msa1390350:intron | 60.0% | |
| AGCCTGGAGAGACCTCAGTC+TGG | + | tig0021335:6829-6848 | None:intergenic | 60.0% | |
| GGAGTTGTGCTTGGGGGAAG+TGG | - | tig0021335:7274-7293 | Msa1390350:CDS | 60.0% | |
| ! | CAGTTGGTGTTCACGGGCCA+TGG | - | tig0021335:7407-7426 | Msa1390350:five_prime_UTR | 60.0% |
| GGCGGCGGGAGTGGAATTAC+CGG | - | tig0021335:1435-1454 | Msa1390350:CDS | 65.0% | |
| GGCGGGAGTGGAATTACCGG+AGG | - | tig0021335:1438-1457 | Msa1390350:CDS | 65.0% | |
| GGGTTGCCTCCCCCAGGAAA+AGG | - | tig0021335:4084-4103 | Msa1390350:intron | 65.0% | |
| CGCCAGACTGAGGTCTCTCC+AGG | - | tig0021335:6824-6843 | Msa1390350:intron | 65.0% | |
| TTGGGGGAAGTGGGGCCAGT+GGG | - | tig0021335:7284-7303 | Msa1390350:CDS | 65.0% | |
| ! | GGTGCTGGAGGCGGTTCTCG+AGG | - | tig0021335:3829-3848 | Msa1390350:CDS | 70.0% |
| CTTGGGGGAAGTGGGGCCAG+TGG | - | tig0021335:7283-7302 | Msa1390350:CDS | 70.0% | |
| GGGGAAGTGGGGCCAGTGGG+AGG | - | tig0021335:7287-7306 | Msa1390350:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021335 | gene | 1053 | 7692 | 1053 | ID=Msa1390350;Name=Msa1390350 |
| tig0021335 | mRNA | 1053 | 7692 | 1053 | ID=Msa1390350-mRNA-1;Parent=Msa1390350;Name=Msa1390350-mRNA-1;_AED=0.07;_eAED=0.07;_QI=380|1|1|1|1|1|11|236|1168 |
| tig0021335 | exon | 1053 | 1766 | 1053 | ID=Msa1390350-mRNA-1:exon:12180;Parent=Msa1390350-mRNA-1 |
| tig0021335 | exon | 1865 | 2048 | 1865 | ID=Msa1390350-mRNA-1:exon:12179;Parent=Msa1390350-mRNA-1 |
| tig0021335 | exon | 2149 | 2482 | 2149 | ID=Msa1390350-mRNA-1:exon:12178;Parent=Msa1390350-mRNA-1 |
| tig0021335 | exon | 2783 | 3010 | 2783 | ID=Msa1390350-mRNA-1:exon:12177;Parent=Msa1390350-mRNA-1 |
| tig0021335 | exon | 3115 | 3303 | 3115 | ID=Msa1390350-mRNA-1:exon:12176;Parent=Msa1390350-mRNA-1 |
| tig0021335 | exon | 3435 | 3869 | 3435 | ID=Msa1390350-mRNA-1:exon:12175;Parent=Msa1390350-mRNA-1 |
| tig0021335 | exon | 4141 | 4915 | 4141 | ID=Msa1390350-mRNA-1:exon:12174;Parent=Msa1390350-mRNA-1 |
| tig0021335 | exon | 5129 | 5244 | 5129 | ID=Msa1390350-mRNA-1:exon:12173;Parent=Msa1390350-mRNA-1 |
| tig0021335 | exon | 5365 | 5809 | 5365 | ID=Msa1390350-mRNA-1:exon:12172;Parent=Msa1390350-mRNA-1 |
| tig0021335 | exon | 6627 | 6751 | 6627 | ID=Msa1390350-mRNA-1:exon:12171;Parent=Msa1390350-mRNA-1 |
| tig0021335 | exon | 7115 | 7692 | 7115 | ID=Msa1390350-mRNA-1:exon:12170;Parent=Msa1390350-mRNA-1 |
| tig0021335 | five_prime_UTR | 7313 | 7692 | 7313 | ID=Msa1390350-mRNA-1:five_prime_utr;Parent=Msa1390350-mRNA-1 |
| tig0021335 | CDS | 7115 | 7312 | 7115 | ID=Msa1390350-mRNA-1:cds;Parent=Msa1390350-mRNA-1 |
| tig0021335 | CDS | 6627 | 6751 | 6627 | ID=Msa1390350-mRNA-1:cds;Parent=Msa1390350-mRNA-1 |
| tig0021335 | CDS | 5365 | 5809 | 5365 | ID=Msa1390350-mRNA-1:cds;Parent=Msa1390350-mRNA-1 |
| tig0021335 | CDS | 5129 | 5244 | 5129 | ID=Msa1390350-mRNA-1:cds;Parent=Msa1390350-mRNA-1 |
| tig0021335 | CDS | 4141 | 4915 | 4141 | ID=Msa1390350-mRNA-1:cds;Parent=Msa1390350-mRNA-1 |
| tig0021335 | CDS | 3435 | 3869 | 3435 | ID=Msa1390350-mRNA-1:cds;Parent=Msa1390350-mRNA-1 |
| tig0021335 | CDS | 3115 | 3303 | 3115 | ID=Msa1390350-mRNA-1:cds;Parent=Msa1390350-mRNA-1 |
| tig0021335 | CDS | 2783 | 3010 | 2783 | ID=Msa1390350-mRNA-1:cds;Parent=Msa1390350-mRNA-1 |
| tig0021335 | CDS | 2149 | 2482 | 2149 | ID=Msa1390350-mRNA-1:cds;Parent=Msa1390350-mRNA-1 |
| tig0021335 | CDS | 1865 | 2048 | 1865 | ID=Msa1390350-mRNA-1:cds;Parent=Msa1390350-mRNA-1 |
| tig0021335 | CDS | 1289 | 1766 | 1289 | ID=Msa1390350-mRNA-1:cds;Parent=Msa1390350-mRNA-1 |
| tig0021335 | three_prime_UTR | 1053 | 1288 | 1053 | ID=Msa1390350-mRNA-1:three_prime_utr;Parent=Msa1390350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
