AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0244710


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0244710 MtrunA17_Chr2g0296581 91.085 931 57 5 1 921 1 915 0.0 1517
Msa0244710 MtrunA17_Chr4g0052941 41.676 895 355 32 96 921 21 817 1.13e-157 483
Msa0244710 MtrunA17_Chr1g0197481 40.741 135 69 2 795 918 714 848 1.41e-25 114
Msa0244710 MtrunA17_Chr1g0197481 24.542 709 385 23 36 671 16 647 3.90e-19 93.2
Msa0244710 MtrunA17_Chr4g0027771 36.641 131 68 2 801 918 687 815 5.02e-22 102
Msa0244710 MtrunA17_Chr2g0292551 36.508 126 70 1 804 919 610 735 1.04e-18 91.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0244710 AT2G34920.2 30.806 633 293 15 308 920 156 663 1.52e-77 266
Msa0244710 AT1G30860.1 32.834 667 311 19 300 917 146 724 6.17e-76 263
Msa0244710 AT2G34920.1 30.016 633 284 18 308 920 156 649 3.27e-68 240
Msa0244710 AT4G20160.3 40.113 177 94 2 744 920 1046 1210 8.57e-35 144
Msa0244710 AT4G20160.3 41.290 155 70 4 301 450 208 346 3.39e-19 94.0
Msa0244710 AT4G20160.2 40.113 177 94 2 744 920 1048 1212 8.89e-35 144
Msa0244710 AT4G20160.2 41.290 155 70 4 301 450 210 348 3.48e-19 94.0
Msa0244710 AT5G04460.6 41.270 126 64 1 803 918 735 860 2.91e-27 119
Msa0244710 AT5G04460.6 28.972 321 183 10 375 671 361 660 3.34e-13 74.3
Msa0244710 AT5G04460.3 41.270 126 64 1 803 918 735 860 2.91e-27 119
Msa0244710 AT5G04460.3 28.972 321 183 10 375 671 361 660 3.34e-13 74.3
Msa0244710 AT5G04460.1 41.270 126 64 1 803 918 735 860 2.91e-27 119
Msa0244710 AT5G04460.1 28.972 321 183 10 375 671 361 660 3.34e-13 74.3
Msa0244710 AT5G04460.4 41.270 126 64 1 803 918 735 860 2.91e-27 119
Msa0244710 AT5G04460.4 28.972 321 183 10 375 671 361 660 3.34e-13 74.3
Msa0244710 AT2G27950.2 35.762 151 83 3 780 918 688 836 1.06e-22 105
Msa0244710 AT2G27950.3 35.762 151 83 3 780 918 688 836 1.06e-22 105
Msa0244710 AT2G27950.1 35.762 151 83 3 780 918 688 836 1.06e-22 105
Msa0244710 AT4G20160.1 41.290 155 70 4 301 450 208 346 4.23e-19 93.6
Msa0244710 AT4G20160.1 33.103 145 83 3 744 888 1046 1176 7.04e-15 80.1
Msa0244710 AT5G04460.2 28.972 321 183 10 375 671 361 660 4.70e-13 73.9
Msa0244710 AT5G04460.5 28.972 321 183 10 375 671 361 660 5.61e-13 73.6
Msa0244710 AT5G44690.1 48.387 62 32 0 603 664 505 566 6.85e-11 66.6

Find 178 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGTCTTCCCTTGTTCAATTA+TGG 0.178057 2_2:+23446064 Msa0244710:CDS
CTTCAGATGATGTTGATTTC+TGG 0.190668 2_2:-23447024 None:intergenic
TGTTTGCACCCTTTGGTTAT+TGG 0.218171 2_2:-23448777 None:intergenic
AAGGAACAAGCGTTTGGTTT+TGG 0.220689 2_2:-23445028 None:intergenic
CTGTACTGTATTTCTTTCTT+TGG 0.236514 2_2:-23447407 None:intergenic
GGAAGATCTCCTCAAGAAAA+TGG 0.263129 2_2:+23448241 Msa0244710:CDS
ATTGCGACTTCTTCGCCTTT+TGG 0.264600 2_2:+23445532 Msa0244710:CDS
ACAATAACAATGTTTCTTCT+TGG 0.274224 2_2:+23445737 Msa0244710:CDS
TTGTGTGTTTACTATCTCTT+TGG 0.285465 2_2:-23447458 None:intergenic
TTCCAGGATACAAGTGTTCT+TGG 0.286044 2_2:-23448222 None:intergenic
GAAAGAGTATCTTACTTTAG+AGG 0.290159 2_2:+23449770 Msa0244710:three_prime_UTR
CTCCATTGGAGTGTTTGGTT+TGG 0.290502 2_2:-23446115 None:intergenic
GTCTTCCCTTGTTCAATTAT+GGG 0.293074 2_2:+23446065 Msa0244710:CDS
TCGTGAGATGGTGTCGAATT+TGG 0.295134 2_2:+23445921 Msa0244710:CDS
CGCTCTTCCCAATAGCTTCT+CGG 0.315396 2_2:-23447868 None:intergenic
AACTGCTTTCAGCATAGTTT+TGG 0.321527 2_2:-23447780 None:intergenic
CAAAGTTCTTAATGTTCCTT+TGG 0.332992 2_2:-23445630 None:intergenic
CTCCGACTTTGTCAATTCTA+TGG 0.336013 2_2:-23447557 None:intergenic
AAGTTTCATGACTAAGGATT+TGG 0.352118 2_2:-23449794 None:intergenic
TTCAAACTTTCAAGAGGGTT+TGG 0.353887 2_2:-23445475 None:intergenic
ATTCGCGCCTTCTTGATAGA+TGG 0.358946 2_2:+23445884 Msa0244710:CDS
TTTCTCGACCGAGAAGCTAT+TGG 0.361517 2_2:+23447860 Msa0244710:CDS
TGTGTGTTTACTATCTCTTT+GGG 0.364834 2_2:-23447457 None:intergenic
CAGAGTTCACCTCCATCTTC+TGG 0.365775 2_2:+23446477 Msa0244710:CDS
TTCACTAAGTTTCATGACTA+AGG 0.368348 2_2:-23449800 None:intergenic
GCTCTTTGCTCTGAAAGTTC+TGG 0.370843 2_2:-23446567 None:intergenic
CAATAACAATGTTTCTTCTT+GGG 0.371423 2_2:+23445738 Msa0244710:CDS
ACAAACCTGTTTGCACCCTT+TGG 0.380694 2_2:-23448784 None:intergenic
TTCTCGACCGAGAAGCTATT+GGG 0.381322 2_2:+23447861 Msa0244710:CDS
TTCAAACCTTAGTTGCATAA+TGG 0.382804 2_2:-23447077 None:intergenic
TGGTATCATCAACAACAATA+AGG 0.386293 2_2:+23445816 Msa0244710:CDS
AGCACCTGTATATCTTCATT+TGG 0.389980 2_2:-23447931 None:intergenic
GTCTCCAAGTTCGCACAAAA+AGG 0.393665 2_2:+23446708 Msa0244710:CDS
ACTTGTTCAAAACGAATTAG+AGG 0.402792 2_2:+23446603 Msa0244710:CDS
TGAAATGTGCCAACGATTTA+CGG 0.405058 2_2:+23449663 Msa0244710:CDS
TATATCTTCATTTGGAGAAC+CGG 0.410944 2_2:-23447923 None:intergenic
AAACTGAAAATGGCTTCTTC+TGG 0.411314 2_2:+23445502 Msa0244710:exon
AAGGGTAAATGAGGAGGAGG+AGG 0.412811 2_2:+23448294 Msa0244710:CDS
AACACTAACTCTATCACTTT+CGG 0.419272 2_2:-23446415 None:intergenic
CAATGATTTGCTTATGCAGT+TGG 0.421952 2_2:+23446638 Msa0244710:CDS
TTTGAAGGACCGTTATCATC+AGG 0.422188 2_2:+23446288 Msa0244710:CDS
TTATGCAGTTGGAGCGTGAT+AGG 0.422256 2_2:+23446649 Msa0244710:CDS
GTTTGGCCGATTATCATGAT+AGG 0.423967 2_2:-23448515 None:intergenic
AGTAGTTTGTGTCATGAAAT+CGG 0.425127 2_2:+23448385 Msa0244710:CDS
CTTGATAAAGTTGCTCCATA+TGG 0.430040 2_2:-23448685 None:intergenic
TAGAGAAAGTAGCAAAGTTA+AGG 0.430240 2_2:+23445591 Msa0244710:CDS
CTAATTATAGACAAAGAAAA+CGG 0.433182 2_2:+23445180 Msa0244710:five_prime_UTR
GATACTCTTTCAACTGAGAT+AGG 0.438364 2_2:-23449758 None:intergenic
ACATTGTAATGCACGTGTTA+AGG 0.440126 2_2:-23445663 None:intergenic
CTTGAAAAGTATACGTGAAA+AGG 0.443908 2_2:-23449858 None:intergenic
AAGAGGCTTAACAATTCAAA+TGG 0.444760 2_2:+23446090 Msa0244710:CDS
TGATTGGTAGACGAGGAGTT+TGG 0.452149 2_2:-23448532 None:intergenic
ACAACATGTCTGAAATTGTA+AGG 0.453989 2_2:+23445989 Msa0244710:CDS
AGTCTTCCTATCATGATAAT+CGG 0.455989 2_2:+23448509 Msa0244710:CDS
GATTGTGCAGTAGAAGAGGA+AGG 0.461377 2_2:+23447751 Msa0244710:CDS
TACATCCATCACGATGATTA+CGG 0.464564 2_2:-23445570 None:intergenic
TGACAGTTCCATGCACAATC+TGG 0.465200 2_2:-23447528 None:intergenic
TTCTCCAAATGAAGATATAC+AGG 0.468784 2_2:+23447927 Msa0244710:CDS
TTGTTCAATTATGGGAAAAG+AGG 0.472023 2_2:+23446073 Msa0244710:CDS
GATAGACAATGAAGGGTTGA+TGG 0.476400 2_2:+23448192 Msa0244710:CDS
ATCGTGAAGAGGAGCAAGGA+GGG 0.479809 2_2:+23448335 Msa0244710:CDS
ACTCACAATTGAATGATGAT+TGG 0.480401 2_2:-23448548 None:intergenic
TACCTCGGATGAATGTTCTT+CGG 0.481836 2_2:+23446023 Msa0244710:CDS
TCTTCATTCCCTGATGATAA+CGG 0.482939 2_2:-23446297 None:intergenic
CTTGGAGACAGTTCCACGTT+CGG 0.483022 2_2:-23446694 None:intergenic
GGAAAGGGTAAATGAGGAGG+AGG 0.484249 2_2:+23448291 Msa0244710:CDS
TTTGTTGCTAACAGTCCAAC+TGG 0.486235 2_2:+23446189 Msa0244710:CDS
TTCCAAGAACACTTGTATCC+TGG 0.487761 2_2:+23448220 Msa0244710:CDS
ATATGATATGAGAGGCCATA+TGG 0.488063 2_2:+23448670 Msa0244710:CDS
AGAAGAGGAAAGGGTAAATG+AGG 0.493781 2_2:+23448285 Msa0244710:CDS
GATCTGCCATTATGCAACTA+AGG 0.494103 2_2:+23447071 Msa0244710:CDS
GTTTCTTCTTGGGCTTCAAA+AGG 0.499007 2_2:+23445748 Msa0244710:CDS
CATAACAAGACTGGTAAGAA+AGG 0.500710 2_2:+23449471 Msa0244710:CDS
TCAAGAAGGCGCGAATGTCT+CGG 0.501249 2_2:-23445877 None:intergenic
AGGTTGATGCAGTCTCATAA+AGG 0.501802 2_2:+23448133 Msa0244710:CDS
ATGGAGAAAACAAGTCCAAC+GGG 0.503867 2_2:+23446132 Msa0244710:CDS
TTCGCGCCTTCTTGATAGAT+GGG 0.504320 2_2:+23445885 Msa0244710:CDS
AATAACCAAAGGGTGCAAAC+AGG 0.504704 2_2:+23448779 Msa0244710:CDS
AAGTTGACTCAGTTCTATAC+AGG 0.506085 2_2:+23449520 Msa0244710:CDS
TGAGACATGACAGTTGAGCT+TGG 0.506263 2_2:-23447604 None:intergenic
CGGTAGATGAAGAAGAGGAA+AGG 0.507356 2_2:+23448275 Msa0244710:CDS
GGAGCAAGGAGGGGAGAGCT+TGG 0.509303 2_2:+23448345 Msa0244710:CDS
GGTAGATGAAGAAGAGGAAA+GGG 0.510736 2_2:+23448276 Msa0244710:CDS
ATTCTAATCAATCCTCATCA+TGG 0.512171 2_2:+23448413 Msa0244710:CDS
GAGCTTGGTTAGTAGTAGCT+TGG 0.515718 2_2:+23448360 Msa0244710:CDS
ATCAAGAGATGAGTGAACTA+AGG 0.515850 2_2:+23448702 Msa0244710:CDS
ATGATGAAAATAATTATGAC+TGG 0.518498 2_2:+23447827 Msa0244710:CDS
TGTGTTCAGTTGATCAAAGT+AGG 0.521979 2_2:+23446382 Msa0244710:CDS
AGTTATAGAGACAATGAAGT+TGG 0.524930 2_2:+23448436 Msa0244710:CDS
TAATTATAGACAAAGAAAAC+GGG 0.526773 2_2:+23445181 Msa0244710:five_prime_UTR
TTTCGCGGAAGCCACTAGAA+AGG 0.527381 2_2:-23448102 None:intergenic
CTGAGTCAACTTTCATCTCA+TGG 0.528417 2_2:-23449509 None:intergenic
TAACGAAAATGAGCCATCCT+TGG 0.528953 2_2:+23445840 Msa0244710:CDS
TTATGATTGTGCAGTAGAAG+AGG 0.530927 2_2:+23447747 Msa0244710:CDS
TAGAACGGTAGATGAAGAAG+AGG 0.535676 2_2:+23448270 Msa0244710:CDS
AGAGCAAAGAGCCTTTCCTC+AGG 0.536128 2_2:+23446578 Msa0244710:CDS
TCCCTTAGAACACAACCAAA+AGG 0.536748 2_2:-23445547 None:intergenic
AACGATTTACGGTGGACCAA+TGG 0.536877 2_2:+23449674 Msa0244710:CDS
TCAACCTATCCATTGTTTCG+CGG 0.538140 2_2:-23448117 None:intergenic
GATGATGAGATAGACAATGA+AGG 0.539997 2_2:+23448184 Msa0244710:CDS
GCATGGGGAGCTAAAGAACT+TGG 0.540046 2_2:+23446671 Msa0244710:CDS
AGTTGGAGCGTGATAGGCAT+GGG 0.540435 2_2:+23446655 Msa0244710:CDS
CAGTTGGAGCGTGATAGGCA+TGG 0.543124 2_2:+23446654 Msa0244710:CDS
TAGGAAGACTGAGATTGATA+AGG 0.546626 2_2:-23448496 None:intergenic
GATGTTGATTTCTGGTGTGA+TGG 0.551693 2_2:-23447016 None:intergenic
GAACATTAAGAACTTTGTCA+TGG 0.556261 2_2:+23445636 Msa0244710:CDS
ATTGTGCAGTAGAAGAGGAA+GGG 0.556865 2_2:+23447752 Msa0244710:CDS
CTAAAGAACTTGGCCGAACG+TGG 0.559845 2_2:+23446681 Msa0244710:CDS
GTTTCAACCTTCCTTTCTAG+TGG 0.560956 2_2:+23448091 Msa0244710:CDS
TAGTGGCTTCCGCGAAACAA+TGG 0.562825 2_2:+23448108 Msa0244710:CDS
AGAGGAAAGGGTAAATGAGG+AGG 0.564527 2_2:+23448288 Msa0244710:CDS
AAGAAGTCACATAACAAGAC+TGG 0.565229 2_2:+23449462 Msa0244710:CDS
TGAACAAGTAACCTGAGGAA+AGG 0.566523 2_2:-23446589 None:intergenic
AGACAAAGAAAACGGGAATG+AGG 0.567296 2_2:+23445188 Msa0244710:five_prime_UTR
TCATTGTCATCACCAGAAGA+TGG 0.568059 2_2:-23446489 None:intergenic
ATATACAGGTGCTTCTTCAA+AGG 0.568191 2_2:+23447941 Msa0244710:CDS
TTGAAGGACCGTTATCATCA+GGG 0.568227 2_2:+23446289 Msa0244710:CDS
GGGAAGAGCGGAGGCAAGCA+TGG 0.569370 2_2:+23447881 Msa0244710:CDS
GAAATCAATAAAGAGTTGCA+TGG 0.573388 2_2:+23448724 Msa0244710:CDS
GATTGGGAATCTGATAAGAC+AGG 0.576359 2_2:+23446345 Msa0244710:CDS
CAAAGAAAGAAATACAGTAC+AGG 0.576417 2_2:+23447408 Msa0244710:CDS
AGATGAGAAAGATCGTGAAG+AGG 0.578833 2_2:+23448324 Msa0244710:CDS
TTGTTTGGTCTAAATTGGTG+TGG 0.582058 2_2:-23445057 None:intergenic
CTAATCAACGAAGCCAAGGA+TGG 0.582490 2_2:-23445853 None:intergenic
ATGATGAGATAGACAATGAA+GGG 0.586074 2_2:+23448185 Msa0244710:CDS
TGCGAGACAAGCTCGTGAGA+TGG 0.589919 2_2:+23445909 Msa0244710:CDS
ATAAGACAGGTGATCAGAGT+AGG 0.590816 2_2:+23446358 Msa0244710:CDS
GTGTTTACTATCTCTTTGGG+AGG 0.591816 2_2:-23447454 None:intergenic
GCGGAAGCCACTAGAAAGGA+AGG 0.594096 2_2:-23448098 None:intergenic
TGCATAATGGCAGATCCGTA+TGG 0.595208 2_2:-23447064 None:intergenic
TCTTCGGAGAAATTGAACCT+TGG 0.595298 2_2:+23446039 Msa0244710:CDS
GTTGCACTTGTCACACCCGT+TGG 0.598328 2_2:-23446147 None:intergenic
AGGGACCGTAATCATCGTGA+TGG 0.600040 2_2:+23445565 Msa0244710:CDS
GTTGCAGTTGTACCACCAGT+TGG 0.600262 2_2:-23446204 None:intergenic
AACAGACAAGTACAACCATA+CGG 0.601071 2_2:+23447049 Msa0244710:CDS
CGAGAAGCTATTGGGAAGAG+CGG 0.602957 2_2:+23447869 Msa0244710:CDS
ACAAGTGGCCAGATTGTGCA+TGG 0.603264 2_2:+23447520 Msa0244710:CDS
ATTGGTCCACCGTAAATCGT+TGG 0.604903 2_2:-23449672 None:intergenic
TCGCAGCCCATCTATCAAGA+AGG 0.606356 2_2:-23445891 None:intergenic
GTCTCTATAACTCCATGATG+AGG 0.607032 2_2:-23448425 None:intergenic
ACTTAAATTGTTACGTGGCG+CGG 0.614471 2_2:+23446982 Msa0244710:CDS
TTTGCTGATTTGATCAGCAG+TGG 0.614524 2_2:-23447494 None:intergenic
CGCCATAGAATTGACAAAGT+CGG 0.614709 2_2:+23447555 Msa0244710:CDS
AAGAGGTTCGGAACTAGGAG+AGG 0.614950 2_2:+23446263 Msa0244710:CDS
CTTCGACTTAAATTGTTACG+TGG 0.616038 2_2:+23446977 Msa0244710:CDS
CGGACTAATCAACGAAGCCA+AGG 0.616630 2_2:-23445857 None:intergenic
ATCCAAACCAAACACTCCAA+TGG 0.617112 2_2:+23446113 Msa0244710:CDS
AAGGTAGCAACAATCTTGCA+AGG 0.617645 2_2:+23445767 Msa0244710:CDS
AATGGAGAAAACAAGTCCAA+CGG 0.624046 2_2:+23446131 Msa0244710:CDS
AGAAAATGGAACAGATAGAA+CGG 0.624425 2_2:+23448255 Msa0244710:CDS
CTCCGAAGAACATTCATCCG+AGG 0.625270 2_2:-23446025 None:intergenic
GATCTCATATATGATATGAG+AGG 0.634713 2_2:+23448662 Msa0244710:CDS
AAGCAGTTATGAAGAGATGG+TGG 0.635175 2_2:+23447795 Msa0244710:CDS
CAAATCAGCAAAGACACAAG+TGG 0.635476 2_2:+23447505 Msa0244710:CDS
AGAGGTTCGGAACTAGGAGA+GGG 0.636854 2_2:+23446264 Msa0244710:CDS
GACAATGATCATGAAGGATG+TGG 0.638361 2_2:+23446504 Msa0244710:CDS
TTGTAATGCACGTGTTAAGG+TGG 0.638583 2_2:-23445660 None:intergenic
AAAGATCGTGAAGAGGAGCA+AGG 0.640572 2_2:+23448331 Msa0244710:CDS
GCTTCCGCGAAACAATGGAT+AGG 0.642771 2_2:+23448113 Msa0244710:CDS
TCGTGAAGAGGAGCAAGGAG+GGG 0.649715 2_2:+23448336 Msa0244710:CDS
TGAAAGCAGTTATGAAGAGA+TGG 0.649757 2_2:+23447792 Msa0244710:CDS
TTACTGTGAGGAAACTTCTG+AGG 0.653061 2_2:+23447654 Msa0244710:CDS
GATCGTGAAGAGGAGCAAGG+AGG 0.655065 2_2:+23448334 Msa0244710:CDS
GAAGCTATTGGGAAGAGCGG+AGG 0.656101 2_2:+23447872 Msa0244710:CDS
TTGAAGAGAAACAATCACAA+TGG 0.663855 2_2:+23445796 Msa0244710:CDS
GGTGATGACAATGATCATGA+AGG 0.664896 2_2:+23446498 Msa0244710:CDS
AAGGACATCTAGTTCTACCT+CGG 0.665676 2_2:+23446008 Msa0244710:CDS
GAACAAGGGAAGACGCACCA+AGG 0.669380 2_2:-23446056 None:intergenic
GTTGGAGCGTGATAGGCATG+GGG 0.671128 2_2:+23446656 Msa0244710:CDS
TATAGAGAGATGCTTGACAC+CGG 0.672311 2_2:+23447904 Msa0244710:CDS
GTTGCTAACAGTCCAACTGG+TGG 0.677526 2_2:+23446192 Msa0244710:CDS
TGAATGATGATTGGTAGACG+AGG 0.682281 2_2:-23448539 None:intergenic
AATGATCATGAAGGATGTGG+TGG 0.683968 2_2:+23446507 Msa0244710:CDS
TTGTCATCACCAGAAGATGG+AGG 0.693312 2_2:-23446486 None:intergenic
AATGTGCCAACGATTTACGG+TGG 0.717556 2_2:+23449666 Msa0244710:CDS
GGCTCAGCGTGATTACTGTG+AGG 0.718046 2_2:+23447642 Msa0244710:CDS
TCTGGTGCAAAATCTTTACG+AGG 0.719819 2_2:-23446549 None:intergenic
AGGATGTGGTGGTAGCAGTG+TGG 0.795037 2_2:+23446518 Msa0244710:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTAATTAGATTGAAAAT+TGG + chr2_2:23447996-23448015 Msa0244710:intron 10.0%
!! GTTATAAATAATTCAATATT+AGG - chr2_2:23449569-23449588 None:intergenic 10.0%
!!! TTTAATTTCTGACATATATA+TGG - chr2_2:23447133-23447152 None:intergenic 15.0%
!!! TCAAGTATATGATTTTTTTT+AGG + chr2_2:23449876-23449895 Msa0244710:three_prime_UTR 15.0%
!!! TTTTTTTGTTTGGTCTAAAT+TGG - chr2_2:23445065-23445084 None:intergenic 20.0%
!!! GTGTTTTTTCTTTTTTTGTT+TGG - chr2_2:23445075-23445094 None:intergenic 20.0%
!! CTAATTATAGACAAAGAAAA+CGG + chr2_2:23445180-23445199 Msa0244710:five_prime_UTR 20.0%
!! TAATTATAGACAAAGAAAAC+GGG + chr2_2:23445181-23445200 Msa0244710:five_prime_UTR 20.0%
!! TTTGAAGAAAAAACTGAAAA+TGG + chr2_2:23445492-23445511 Msa0244710:exon 20.0%
!! ATTCAGGTAAAAGAATAAAA+AGG + chr2_2:23446735-23446754 Msa0244710:intron 20.0%
!!! TTCAAATTTTAACGAGAAAA+AGG + chr2_2:23447696-23447715 Msa0244710:CDS 20.0%
!! ATGATGAAAATAATTATGAC+TGG + chr2_2:23447827-23447846 Msa0244710:CDS 20.0%
!!! ATCTTTTACCAAATACAAAA+TGG + chr2_2:23448621-23448640 Msa0244710:intron 20.0%
!!! TTAACACATTTAAAATCTGT+AGG - chr2_2:23448817-23448836 None:intergenic 20.0%
!!! ATATGTTTTAAAAATCGAGT+TGG + chr2_2:23448936-23448955 Msa0244710:intron 20.0%
!!! TTTTAAAGACTAAACTAAAC+GGG - chr2_2:23449096-23449115 None:intergenic 20.0%
!!! GTTTTAAAGACTAAACTAAA+CGG - chr2_2:23449097-23449116 None:intergenic 20.0%
!!! ATATTTGTGATTTTCCTTTT+GGG - chr2_2:23449256-23449275 None:intergenic 20.0%
!!! AATATTTGTGATTTTCCTTT+TGG - chr2_2:23449257-23449276 None:intergenic 20.0%
!! GTCATGAAATGTATTAAATA+TGG + chr2_2:23449412-23449431 Msa0244710:intron 20.0%
!!! GATTTTTTTTAGGAGAAATT+CGG + chr2_2:23449886-23449905 Msa0244710:three_prime_UTR 20.0%
! AGACACAATACACAAAAATA+AGG - chr2_2:23445131-23445150 None:intergenic 25.0%
! TAGTTATTACACGAAAAGAA+AGG - chr2_2:23445264-23445283 None:intergenic 25.0%
! AAAAGAAGAATGTGAAAAAG+AGG - chr2_2:23445330-23445349 None:intergenic 25.0%
!! TCATAGACATATTTTTCTCT+TGG - chr2_2:23445370-23445389 None:intergenic 25.0%
!!! ATGTCTATGATGATGAATTT+TGG + chr2_2:23445380-23445399 Msa0244710:intron 25.0%
!!! TGTCTATGATGATGAATTTT+GGG + chr2_2:23445381-23445400 Msa0244710:intron 25.0%
!! TTTTCTTCAAACTTTCAAGA+GGG - chr2_2:23445483-23445502 None:intergenic 25.0%
!! TTTTTCTTCAAACTTTCAAG+AGG - chr2_2:23445484-23445503 None:intergenic 25.0%
! ACAATAACAATGTTTCTTCT+TGG + chr2_2:23445737-23445756 Msa0244710:CDS 25.0%
! CAATAACAATGTTTCTTCTT+GGG + chr2_2:23445738-23445757 Msa0244710:CDS 25.0%
!!! TTTGTTGTTGAAGAAAAAAG+AGG + chr2_2:23446246-23446265 Msa0244710:CDS 25.0%
! GTAAAAGAATAAAAAGGAAG+TGG + chr2_2:23446741-23446760 Msa0244710:intron 25.0%
!!! CAAGCACTTACTTTTATAAA+TGG + chr2_2:23447251-23447270 Msa0244710:intron 25.0%
! AGAAACATTCATCACAATTA+AGG + chr2_2:23447331-23447350 Msa0244710:intron 25.0%
!! ATTTTTCCTGCATTACATAA+CGG - chr2_2:23447374-23447393 None:intergenic 25.0%
! TTCAAATGTTACCTTAAGAT+AGG + chr2_2:23448577-23448596 Msa0244710:intron 25.0%
! TACAAAAATCCAATAACCAA+AGG + chr2_2:23448768-23448787 Msa0244710:CDS 25.0%
! ACAAAAATCCAATAACCAAA+GGG + chr2_2:23448769-23448788 Msa0244710:CDS 25.0%
! AAAGTTGTCAATGAATCATT+AGG + chr2_2:23448854-23448873 Msa0244710:intron 25.0%
!!! GTTATCTATTGTCCTTTTTT+TGG + chr2_2:23449371-23449390 Msa0244710:intron 25.0%
TAAATTGGTGTGGCTAAAAA+AGG - chr2_2:23445050-23445069 None:intergenic 30.0%
ATTACACGAAAAGAAAGGAA+CGG - chr2_2:23445259-23445278 None:intergenic 30.0%
TTCATCCCTTTATCTGAAAA+GGG + chr2_2:23445426-23445445 Msa0244710:intron 30.0%
! AACAACCCTTTTCAGATAAA+GGG - chr2_2:23445434-23445453 None:intergenic 30.0%
! AAACAACCCTTTTCAGATAA+AGG - chr2_2:23445435-23445454 None:intergenic 30.0%
!!! AAAAGGGTTGTTTTGTTTTC+AGG + chr2_2:23445442-23445461 Msa0244710:intron 30.0%
TAGAGAAAGTAGCAAAGTTA+AGG + chr2_2:23445591-23445610 Msa0244710:CDS 30.0%
CAAAGTTCTTAATGTTCCTT+TGG - chr2_2:23445633-23445652 None:intergenic 30.0%
GAACATTAAGAACTTTGTCA+TGG + chr2_2:23445636-23445655 Msa0244710:CDS 30.0%
TTGAAGAGAAACAATCACAA+TGG + chr2_2:23445796-23445815 Msa0244710:CDS 30.0%
TGGTATCATCAACAACAATA+AGG + chr2_2:23445816-23445835 Msa0244710:CDS 30.0%
! ACAACATGTCTGAAATTGTA+AGG + chr2_2:23445989-23446008 Msa0244710:CDS 30.0%
! CTTTTCCCATAATTGAACAA+GGG - chr2_2:23446073-23446092 None:intergenic 30.0%
! TCTTTTCCCATAATTGAACA+AGG - chr2_2:23446074-23446093 None:intergenic 30.0%
TTGTTCAATTATGGGAAAAG+AGG + chr2_2:23446073-23446092 Msa0244710:CDS 30.0%
AAGAGGCTTAACAATTCAAA+TGG + chr2_2:23446090-23446109 Msa0244710:CDS 30.0%
TGTTGAAGAAAAAAGAGGTT+CGG + chr2_2:23446251-23446270 Msa0244710:CDS 30.0%
!! GTTTTCTTCATTCACTGATT+GGG + chr2_2:23446329-23446348 Msa0244710:CDS 30.0%
AACACTAACTCTATCACTTT+CGG - chr2_2:23446418-23446437 None:intergenic 30.0%
ACTTGTTCAAAACGAATTAG+AGG + chr2_2:23446603-23446622 Msa0244710:CDS 30.0%
TAGTACGACTTTAATAGTTG+TGG + chr2_2:23446876-23446895 Msa0244710:intron 30.0%
TTCAAACCTTAGTTGCATAA+TGG - chr2_2:23447080-23447099 None:intergenic 30.0%
CTAAATTTCACTCTATGGAA+TGG - chr2_2:23447171-23447190 None:intergenic 30.0%
CTAGTCTAAATTTCACTCTA+TGG - chr2_2:23447176-23447195 None:intergenic 30.0%
TTTCTATGTATTGCGTATCT+TGG - chr2_2:23447316-23447335 None:intergenic 30.0%
!! CAGGAAAAATTTTAGCATCA+GGG + chr2_2:23447384-23447403 Msa0244710:intron 30.0%
CTGTACTGTATTTCTTTCTT+TGG - chr2_2:23447410-23447429 None:intergenic 30.0%
CAAAGAAAGAAATACAGTAC+AGG + chr2_2:23447408-23447427 Msa0244710:CDS 30.0%
TGTGTGTTTACTATCTCTTT+GGG - chr2_2:23447460-23447479 None:intergenic 30.0%
TTGTGTGTTTACTATCTCTT+TGG - chr2_2:23447461-23447480 None:intergenic 30.0%
! AACTGTTTTCATCATTTTGC+TGG - chr2_2:23447729-23447748 None:intergenic 30.0%
TATATCTTCATTTGGAGAAC+CGG - chr2_2:23447926-23447945 None:intergenic 30.0%
TTCTCCAAATGAAGATATAC+AGG + chr2_2:23447927-23447946 Msa0244710:CDS 30.0%
ATGATGAGATAGACAATGAA+GGG + chr2_2:23448185-23448204 Msa0244710:CDS 30.0%
AGAAAATGGAACAGATAGAA+CGG + chr2_2:23448255-23448274 Msa0244710:CDS 30.0%
! AGTAGTTTGTGTCATGAAAT+CGG + chr2_2:23448385-23448404 Msa0244710:CDS 30.0%
ATTCTAATCAATCCTCATCA+TGG + chr2_2:23448413-23448432 Msa0244710:CDS 30.0%
AGTTATAGAGACAATGAAGT+TGG + chr2_2:23448436-23448455 Msa0244710:CDS 30.0%
AGTCTTCCTATCATGATAAT+CGG + chr2_2:23448509-23448528 Msa0244710:CDS 30.0%
ACTCACAATTGAATGATGAT+TGG - chr2_2:23448551-23448570 None:intergenic 30.0%
AATGCACTAAACCTATCTTA+AGG - chr2_2:23448591-23448610 None:intergenic 30.0%
! AAGCACATCCATTTTGTATT+TGG - chr2_2:23448632-23448651 None:intergenic 30.0%
GATCTCATATATGATATGAG+AGG + chr2_2:23448662-23448681 Msa0244710:CDS 30.0%
GAAATCAATAAAGAGTTGCA+TGG + chr2_2:23448724-23448743 Msa0244710:CDS 30.0%
CTTAAGAATTTCCCAAACAA+AGG + chr2_2:23448898-23448917 Msa0244710:intron 30.0%
ATGCTAATATAACCTAACTG+TGG + chr2_2:23449035-23449054 Msa0244710:intron 30.0%
TCATGACTAAAGATATTCAG+AGG - chr2_2:23449399-23449418 None:intergenic 30.0%
!!! TTCCATCAACTTCTTTTTTC+AGG + chr2_2:23449618-23449637 Msa0244710:intron 30.0%
! ACATATTGGACATTTTCCAT+TGG - chr2_2:23449693-23449712 None:intergenic 30.0%
!! GAAAGAGTATCTTACTTTAG+AGG + chr2_2:23449770-23449789 Msa0244710:three_prime_UTR 30.0%
AAGTTTCATGACTAAGGATT+TGG - chr2_2:23449797-23449816 None:intergenic 30.0%
TTCACTAAGTTTCATGACTA+AGG - chr2_2:23449803-23449822 None:intergenic 30.0%
! CTTGAAAAGTATACGTGAAA+AGG - chr2_2:23449861-23449880 None:intergenic 30.0%
CTAAAAAAGGAACAAGCGTT+TGG - chr2_2:23445037-23445056 None:intergenic 35.0%
TTGTTTGGTCTAAATTGGTG+TGG - chr2_2:23445060-23445079 None:intergenic 35.0%
AAAAGAGGAGGAAAAGATGA+AGG - chr2_2:23445315-23445334 None:intergenic 35.0%
AGAAGAATGTGAAAAAGAGG+AGG - chr2_2:23445327-23445346 None:intergenic 35.0%
!! CTATGATGATGAATTTTGGG+AGG + chr2_2:23445384-23445403 Msa0244710:intron 35.0%
CTTCATCCCTTTATCTGAAA+AGG + chr2_2:23445425-23445444 Msa0244710:intron 35.0%
TTCAAACTTTCAAGAGGGTT+TGG - chr2_2:23445478-23445497 None:intergenic 35.0%
AAACTGAAAATGGCTTCTTC+TGG + chr2_2:23445502-23445521 Msa0244710:exon 35.0%
TACATCCATCACGATGATTA+CGG - chr2_2:23445573-23445592 None:intergenic 35.0%
ACATTGTAATGCACGTGTTA+AGG - chr2_2:23445666-23445685 None:intergenic 35.0%
GTCTTCCCTTGTTCAATTAT+GGG + chr2_2:23446065-23446084 Msa0244710:CDS 35.0%
AATGGAGAAAACAAGTCCAA+CGG + chr2_2:23446131-23446150 Msa0244710:CDS 35.0%
TCTTCATTCCCTGATGATAA+CGG - chr2_2:23446300-23446319 None:intergenic 35.0%
! CGTTTTCTTCATTCACTGAT+TGG + chr2_2:23446328-23446347 Msa0244710:CDS 35.0%
TGTGTTCAGTTGATCAAAGT+AGG + chr2_2:23446382-23446401 Msa0244710:CDS 35.0%
!! CAATGATTTGCTTATGCAGT+TGG + chr2_2:23446638-23446657 Msa0244710:CDS 35.0%
! GGATCACATGTTTAAAACCT+TGG - chr2_2:23446812-23446831 None:intergenic 35.0%
GCAATATCAAAGACAACAAC+AGG - chr2_2:23446833-23446852 None:intergenic 35.0%
CATGAAATCGAGCAATAGAA+AGG - chr2_2:23446914-23446933 None:intergenic 35.0%
AATTCGTACACATCATGACA+CGG - chr2_2:23446948-23446967 None:intergenic 35.0%
CTTCGACTTAAATTGTTACG+TGG + chr2_2:23446977-23446996 Msa0244710:CDS 35.0%
!! CTTCAGATGATGTTGATTTC+TGG - chr2_2:23447027-23447046 None:intergenic 35.0%
AACAGACAAGTACAACCATA+CGG + chr2_2:23447049-23447068 Msa0244710:CDS 35.0%
TCTGACATATATATGGTCCA+TGG - chr2_2:23447126-23447145 None:intergenic 35.0%
AGATGAGAAATTGAGCATGA+AGG + chr2_2:23447218-23447237 Msa0244710:intron 35.0%
!! GCAGGAAAAATTTTAGCATC+AGG + chr2_2:23447383-23447402 Msa0244710:intron 35.0%
! GTCTCAAGAAACATGTTTTG+AGG + chr2_2:23447621-23447640 Msa0244710:CDS 35.0%
TTATGATTGTGCAGTAGAAG+AGG + chr2_2:23447747-23447766 Msa0244710:CDS 35.0%
! AACTGCTTTCAGCATAGTTT+TGG - chr2_2:23447783-23447802 None:intergenic 35.0%
TGAAAGCAGTTATGAAGAGA+TGG + chr2_2:23447792-23447811 Msa0244710:CDS 35.0%
AGCACCTGTATATCTTCATT+TGG - chr2_2:23447934-23447953 None:intergenic 35.0%
ATATACAGGTGCTTCTTCAA+AGG + chr2_2:23447941-23447960 Msa0244710:CDS 35.0%
GATGATGAGATAGACAATGA+AGG + chr2_2:23448184-23448203 Msa0244710:CDS 35.0%
! CTATCTGTTCCATTTTCTTG+AGG - chr2_2:23448253-23448272 None:intergenic 35.0%
TAGGAAGACTGAGATTGATA+AGG - chr2_2:23448499-23448518 None:intergenic 35.0%
TACAAAATGGATGTGCTTAC+AGG + chr2_2:23448634-23448653 Msa0244710:intron 35.0%
ATATGATATGAGAGGCCATA+TGG + chr2_2:23448670-23448689 Msa0244710:CDS 35.0%
CTTGATAAAGTTGCTCCATA+TGG - chr2_2:23448688-23448707 None:intergenic 35.0%
ATCAAGAGATGAGTGAACTA+AGG + chr2_2:23448702-23448721 Msa0244710:CDS 35.0%
TTCCCAAACAAAGGAAAAAG+AGG + chr2_2:23448907-23448926 Msa0244710:intron 35.0%
!! CACCTCTTTTTCCTTTGTTT+GGG - chr2_2:23448912-23448931 None:intergenic 35.0%
! ACACCTCTTTTTCCTTTGTT+TGG - chr2_2:23448913-23448932 None:intergenic 35.0%
! GGTTTAAAACAGTTGAACCA+TGG - chr2_2:23448987-23449006 None:intergenic 35.0%
ATTCAGTCGCAATATTCTCT+CGG - chr2_2:23449017-23449036 None:intergenic 35.0%
! AGAATTTTGCTTCACCCAAA+AGG + chr2_2:23449239-23449258 Msa0244710:intron 35.0%
!!! CTTGAGTTTTAAGCGATCTA+AGG - chr2_2:23449297-23449316 None:intergenic 35.0%
!! TATTCAGAGGCACCAAAAAA+AGG - chr2_2:23449386-23449405 None:intergenic 35.0%
! CTTCCTTTTCAGCTGTAAAA+GGG - chr2_2:23449440-23449459 None:intergenic 35.0%
! TCTTCCTTTTCAGCTGTAAA+AGG - chr2_2:23449441-23449460 None:intergenic 35.0%
AAGAAGTCACATAACAAGAC+TGG + chr2_2:23449462-23449481 Msa0244710:CDS 35.0%
CATAACAAGACTGGTAAGAA+AGG + chr2_2:23449471-23449490 Msa0244710:CDS 35.0%
! AAGTTGACTCAGTTCTATAC+AGG + chr2_2:23449520-23449539 Msa0244710:CDS 35.0%
!! TGCTACTTTGTTCTGAAGAT+TGG - chr2_2:23449591-23449610 None:intergenic 35.0%
CACCTGAAAAAAGAAGTTGA+TGG - chr2_2:23449623-23449642 None:intergenic 35.0%
!!! TCAACTTCTTTTTTCAGGTG+TGG + chr2_2:23449623-23449642 Msa0244710:intron 35.0%
TGAAATGTGCCAACGATTTA+CGG + chr2_2:23449663-23449682 Msa0244710:CDS 35.0%
!!! TCTATTTTAGCGCGACATAT+TGG - chr2_2:23449707-23449726 None:intergenic 35.0%
GATACTCTTTCAACTGAGAT+AGG - chr2_2:23449761-23449780 None:intergenic 35.0%
AGACAAAGAAAACGGGAATG+AGG + chr2_2:23445188-23445207 Msa0244710:five_prime_UTR 40.0%
!! GCCTTTTGGTTGTGTTCTAA+GGG + chr2_2:23445546-23445565 Msa0244710:CDS 40.0%
TCCCTTAGAACACAACCAAA+AGG - chr2_2:23445550-23445569 None:intergenic 40.0%
!!! CTACACATGCTGTTTTCCAA+AGG + chr2_2:23445614-23445633 Msa0244710:CDS 40.0%
TTGTAATGCACGTGTTAAGG+TGG - chr2_2:23445663-23445682 None:intergenic 40.0%
GTTTCTTCTTGGGCTTCAAA+AGG + chr2_2:23445748-23445767 Msa0244710:CDS 40.0%
AAGGTAGCAACAATCTTGCA+AGG + chr2_2:23445767-23445786 Msa0244710:CDS 40.0%
TAACGAAAATGAGCCATCCT+TGG + chr2_2:23445840-23445859 Msa0244710:CDS 40.0%
!! AAGGACATCTAGTTCTACCT+CGG + chr2_2:23446008-23446027 Msa0244710:CDS 40.0%
TACCTCGGATGAATGTTCTT+CGG + chr2_2:23446023-23446042 Msa0244710:CDS 40.0%
TCTTCGGAGAAATTGAACCT+TGG + chr2_2:23446039-23446058 Msa0244710:CDS 40.0%
CGTCTTCCCTTGTTCAATTA+TGG + chr2_2:23446064-23446083 Msa0244710:CDS 40.0%
ATCCAAACCAAACACTCCAA+TGG + chr2_2:23446113-23446132 Msa0244710:CDS 40.0%
!! GTTTTCTCCATTGGAGTGTT+TGG - chr2_2:23446123-23446142 None:intergenic 40.0%
!! GTTGGACTTGTTTTCTCCAT+TGG - chr2_2:23446132-23446151 None:intergenic 40.0%
ATGGAGAAAACAAGTCCAAC+GGG + chr2_2:23446132-23446151 Msa0244710:CDS 40.0%
TTTGTTGCTAACAGTCCAAC+TGG + chr2_2:23446189-23446208 Msa0244710:CDS 40.0%
GAAAAAAGAGGTTCGGAACT+AGG + chr2_2:23446258-23446277 Msa0244710:CDS 40.0%
TTTGAAGGACCGTTATCATC+AGG + chr2_2:23446288-23446307 Msa0244710:CDS 40.0%
TTGAAGGACCGTTATCATCA+GGG + chr2_2:23446289-23446308 Msa0244710:CDS 40.0%
GATTGGGAATCTGATAAGAC+AGG + chr2_2:23446345-23446364 Msa0244710:CDS 40.0%
ATAAGACAGGTGATCAGAGT+AGG + chr2_2:23446358-23446377 Msa0244710:CDS 40.0%
TCATTGTCATCACCAGAAGA+TGG - chr2_2:23446492-23446511 None:intergenic 40.0%
GGTGATGACAATGATCATGA+AGG + chr2_2:23446498-23446517 Msa0244710:CDS 40.0%
GACAATGATCATGAAGGATG+TGG + chr2_2:23446504-23446523 Msa0244710:CDS 40.0%
AATGATCATGAAGGATGTGG+TGG + chr2_2:23446507-23446526 Msa0244710:CDS 40.0%
TCTGGTGCAAAATCTTTACG+AGG - chr2_2:23446552-23446571 None:intergenic 40.0%
TGAACAAGTAACCTGAGGAA+AGG - chr2_2:23446592-23446611 None:intergenic 40.0%
!! CGTTTTGAACAAGTAACCTG+AGG - chr2_2:23446597-23446616 None:intergenic 40.0%
GTCATGATGTGTACGAATTC+AGG + chr2_2:23446949-23446968 Msa0244710:intron 40.0%
ACTTAAATTGTTACGTGGCG+CGG + chr2_2:23446982-23447001 Msa0244710:CDS 40.0%
!! GATGTTGATTTCTGGTGTGA+TGG - chr2_2:23447019-23447038 None:intergenic 40.0%
GATCTGCCATTATGCAACTA+AGG + chr2_2:23447071-23447090 Msa0244710:CDS 40.0%
CATGGAAGTTGACATCTGTA+TGG - chr2_2:23447108-23447127 None:intergenic 40.0%
CATACAGATGTCAACTTCCA+TGG + chr2_2:23447106-23447125 Msa0244710:intron 40.0%
GTGTTTACTATCTCTTTGGG+AGG - chr2_2:23447457-23447476 None:intergenic 40.0%
!! TTTGCTGATTTGATCAGCAG+TGG - chr2_2:23447497-23447516 None:intergenic 40.0%
CAAATCAGCAAAGACACAAG+TGG + chr2_2:23447505-23447524 Msa0244710:CDS 40.0%
CGCCATAGAATTGACAAAGT+CGG + chr2_2:23447555-23447574 Msa0244710:CDS 40.0%
CTCCGACTTTGTCAATTCTA+TGG - chr2_2:23447560-23447579 None:intergenic 40.0%
TTACTGTGAGGAAACTTCTG+AGG + chr2_2:23447654-23447673 Msa0244710:CDS 40.0%
ATTGTGCAGTAGAAGAGGAA+GGG + chr2_2:23447752-23447771 Msa0244710:CDS 40.0%
AAGCAGTTATGAAGAGATGG+TGG + chr2_2:23447795-23447814 Msa0244710:CDS 40.0%
TATAGAGAGATGCTTGACAC+CGG + chr2_2:23447904-23447923 Msa0244710:CDS 40.0%
GTTTCAACCTTCCTTTCTAG+TGG + chr2_2:23448091-23448110 Msa0244710:CDS 40.0%
TCAACCTATCCATTGTTTCG+CGG - chr2_2:23448120-23448139 None:intergenic 40.0%
!! AGGTTGATGCAGTCTCATAA+AGG + chr2_2:23448133-23448152 Msa0244710:CDS 40.0%
GATAGACAATGAAGGGTTGA+TGG + chr2_2:23448192-23448211 Msa0244710:CDS 40.0%
TTCCAAGAACACTTGTATCC+TGG + chr2_2:23448220-23448239 Msa0244710:CDS 40.0%
TTCCAGGATACAAGTGTTCT+TGG - chr2_2:23448225-23448244 None:intergenic 40.0%
! TTTTCTTGAGGAGATCTTCC+AGG - chr2_2:23448241-23448260 None:intergenic 40.0%
GGAAGATCTCCTCAAGAAAA+TGG + chr2_2:23448241-23448260 Msa0244710:CDS 40.0%
TAGAACGGTAGATGAAGAAG+AGG + chr2_2:23448270-23448289 Msa0244710:CDS 40.0%
GGTAGATGAAGAAGAGGAAA+GGG + chr2_2:23448276-23448295 Msa0244710:CDS 40.0%
AGAAGAGGAAAGGGTAAATG+AGG + chr2_2:23448285-23448304 Msa0244710:CDS 40.0%
AGATGAGAAAGATCGTGAAG+AGG + chr2_2:23448324-23448343 Msa0244710:CDS 40.0%
GTCTCTATAACTCCATGATG+AGG - chr2_2:23448428-23448447 None:intergenic 40.0%
GTTTGGCCGATTATCATGAT+AGG - chr2_2:23448518-23448537 None:intergenic 40.0%
TGAATGATGATTGGTAGACG+AGG - chr2_2:23448542-23448561 None:intergenic 40.0%
ATGGATGTGCTTACAGGAAA+TGG + chr2_2:23448640-23448659 Msa0244710:intron 40.0%
TGTTTGCACCCTTTGGTTAT+TGG - chr2_2:23448780-23448799 None:intergenic 40.0%
! AATAACCAAAGGGTGCAAAC+AGG + chr2_2:23448779-23448798 Msa0244710:CDS 40.0%
AATCGACATTGTCCACAGTT+AGG - chr2_2:23449050-23449069 None:intergenic 40.0%
! TCTTTTCTGAACTTGCAGAC+TGG - chr2_2:23449219-23449238 None:intergenic 40.0%
!!! GAGTTTTAAGCGATCTAAGG+AGG - chr2_2:23449294-23449313 None:intergenic 40.0%
! GAACCCTTTTACAGCTGAAA+AGG + chr2_2:23449434-23449453 Msa0244710:intron 40.0%
CTGAGTCAACTTTCATCTCA+TGG - chr2_2:23449512-23449531 None:intergenic 40.0%
! ATTGCGACTTCTTCGCCTTT+TGG + chr2_2:23445532-23445551 Msa0244710:CDS 45.0%
!! CGCCTTTTGGTTGTGTTCTA+AGG + chr2_2:23445545-23445564 Msa0244710:CDS 45.0%
CTAATCAACGAAGCCAAGGA+TGG - chr2_2:23445856-23445875 None:intergenic 45.0%
ATTCGCGCCTTCTTGATAGA+TGG + chr2_2:23445884-23445903 Msa0244710:CDS 45.0%
TTCGCGCCTTCTTGATAGAT+GGG + chr2_2:23445885-23445904 Msa0244710:CDS 45.0%
! TCGTGAGATGGTGTCGAATT+TGG + chr2_2:23445921-23445940 Msa0244710:CDS 45.0%
! CTCCATTGGAGTGTTTGGTT+TGG - chr2_2:23446118-23446137 None:intergenic 45.0%
!! GAACTAGGAGAGGGTTTTGA+AGG + chr2_2:23446273-23446292 Msa0244710:CDS 45.0%
TTGTCATCACCAGAAGATGG+AGG - chr2_2:23446489-23446508 None:intergenic 45.0%
!! GCTCTTTGCTCTGAAAGTTC+TGG - chr2_2:23446570-23446589 None:intergenic 45.0%
TTATGCAGTTGGAGCGTGAT+AGG + chr2_2:23446649-23446668 Msa0244710:CDS 45.0%
GTCTCCAAGTTCGCACAAAA+AGG + chr2_2:23446708-23446727 Msa0244710:CDS 45.0%
TATGTTAGTGCTCGTGTCCA+AGG + chr2_2:23446792-23446811 Msa0244710:intron 45.0%
TGCATAATGGCAGATCCGTA+TGG - chr2_2:23447067-23447086 None:intergenic 45.0%
CTTGCACCGTTATGTAATGC+AGG + chr2_2:23447365-23447384 Msa0244710:intron 45.0%
TGACAGTTCCATGCACAATC+TGG - chr2_2:23447531-23447550 None:intergenic 45.0%
TGAGACATGACAGTTGAGCT+TGG - chr2_2:23447607-23447626 None:intergenic 45.0%
GATTGTGCAGTAGAAGAGGA+AGG + chr2_2:23447751-23447770 Msa0244710:CDS 45.0%
TTTCTCGACCGAGAAGCTAT+TGG + chr2_2:23447860-23447879 Msa0244710:CDS 45.0%
TTCTCGACCGAGAAGCTATT+GGG + chr2_2:23447861-23447880 Msa0244710:CDS 45.0%
CGGTAGATGAAGAAGAGGAA+AGG + chr2_2:23448275-23448294 Msa0244710:CDS 45.0%
AGAGGAAAGGGTAAATGAGG+AGG + chr2_2:23448288-23448307 Msa0244710:CDS 45.0%
AAAGATCGTGAAGAGGAGCA+AGG + chr2_2:23448331-23448350 Msa0244710:CDS 45.0%
GAGCTTGGTTAGTAGTAGCT+TGG + chr2_2:23448360-23448379 Msa0244710:CDS 45.0%
TGATTGGTAGACGAGGAGTT+TGG - chr2_2:23448535-23448554 None:intergenic 45.0%
ACAAACCTGTTTGCACCCTT+TGG - chr2_2:23448787-23448806 None:intergenic 45.0%
CTGTCAAAACCACTACACCA+TGG + chr2_2:23448967-23448986 Msa0244710:intron 45.0%
ACAGTTGAACCATGGTGTAG+TGG - chr2_2:23448979-23448998 None:intergenic 45.0%
! CAATATTCTCTCGGTTCGAG+TGG - chr2_2:23449008-23449027 None:intergenic 45.0%
AATGTGCCAACGATTTACGG+TGG + chr2_2:23449666-23449685 Msa0244710:CDS 45.0%
ATTGGTCCACCGTAAATCGT+TGG - chr2_2:23449675-23449694 None:intergenic 45.0%
AACGATTTACGGTGGACCAA+TGG + chr2_2:23449674-23449693 Msa0244710:CDS 45.0%
AGGGACCGTAATCATCGTGA+TGG + chr2_2:23445565-23445584 Msa0244710:CDS 50.0%
CGGACTAATCAACGAAGCCA+AGG - chr2_2:23445860-23445879 None:intergenic 50.0%
! TCAAGAAGGCGCGAATGTCT+CGG - chr2_2:23445880-23445899 None:intergenic 50.0%
TCGCAGCCCATCTATCAAGA+AGG - chr2_2:23445894-23445913 None:intergenic 50.0%
CTCCGAAGAACATTCATCCG+AGG - chr2_2:23446028-23446047 None:intergenic 50.0%
GTTGCTAACAGTCCAACTGG+TGG + chr2_2:23446192-23446211 Msa0244710:CDS 50.0%
GTTGCAGTTGTACCACCAGT+TGG - chr2_2:23446207-23446226 None:intergenic 50.0%
AAGAGGTTCGGAACTAGGAG+AGG + chr2_2:23446263-23446282 Msa0244710:CDS 50.0%
AGAGGTTCGGAACTAGGAGA+GGG + chr2_2:23446264-23446283 Msa0244710:CDS 50.0%
CAGAGTTCACCTCCATCTTC+TGG + chr2_2:23446477-23446496 Msa0244710:CDS 50.0%
AGAGCAAAGAGCCTTTCCTC+AGG + chr2_2:23446578-23446597 Msa0244710:CDS 50.0%
AGTTGGAGCGTGATAGGCAT+GGG + chr2_2:23446655-23446674 Msa0244710:CDS 50.0%
GCATGGGGAGCTAAAGAACT+TGG + chr2_2:23446671-23446690 Msa0244710:CDS 50.0%
CTAAAGAACTTGGCCGAACG+TGG + chr2_2:23446681-23446700 Msa0244710:CDS 50.0%
CTTGGAGACAGTTCCACGTT+CGG - chr2_2:23446697-23446716 None:intergenic 50.0%
! GCGACCTTTTTGTGCGAACT+TGG - chr2_2:23446715-23446734 None:intergenic 50.0%
CGCACAAAAAGGTCGCATTC+AGG + chr2_2:23446719-23446738 Msa0244710:CDS 50.0%
ACAAGTGGCCAGATTGTGCA+TGG + chr2_2:23447520-23447539 Msa0244710:CDS 50.0%
CGCTCTTCCCAATAGCTTCT+CGG - chr2_2:23447871-23447890 None:intergenic 50.0%
CGAGAAGCTATTGGGAAGAG+CGG + chr2_2:23447869-23447888 Msa0244710:CDS 50.0%
TTTCGCGGAAGCCACTAGAA+AGG - chr2_2:23448105-23448124 None:intergenic 50.0%
TAGTGGCTTCCGCGAAACAA+TGG + chr2_2:23448108-23448127 Msa0244710:CDS 50.0%
GCTTCCGCGAAACAATGGAT+AGG + chr2_2:23448113-23448132 Msa0244710:CDS 50.0%
GGAAAGGGTAAATGAGGAGG+AGG + chr2_2:23448291-23448310 Msa0244710:CDS 50.0%
AAGGGTAAATGAGGAGGAGG+AGG + chr2_2:23448294-23448313 Msa0244710:CDS 50.0%
ATCGTGAAGAGGAGCAAGGA+GGG + chr2_2:23448335-23448354 Msa0244710:CDS 50.0%
TGCGAGACAAGCTCGTGAGA+TGG + chr2_2:23445909-23445928 Msa0244710:CDS 55.0%
GAACAAGGGAAGACGCACCA+AGG - chr2_2:23446059-23446078 None:intergenic 55.0%
GTTGCACTTGTCACACCCGT+TGG - chr2_2:23446150-23446169 None:intergenic 55.0%
AGGATGTGGTGGTAGCAGTG+TGG + chr2_2:23446518-23446537 Msa0244710:CDS 55.0%
CAGTTGGAGCGTGATAGGCA+TGG + chr2_2:23446654-23446673 Msa0244710:CDS 55.0%
GTTGGAGCGTGATAGGCATG+GGG + chr2_2:23446656-23446675 Msa0244710:CDS 55.0%
GGCTCAGCGTGATTACTGTG+AGG + chr2_2:23447642-23447661 Msa0244710:CDS 55.0%
GAAGCTATTGGGAAGAGCGG+AGG + chr2_2:23447872-23447891 Msa0244710:CDS 55.0%
GCGGAAGCCACTAGAAAGGA+AGG - chr2_2:23448101-23448120 None:intergenic 55.0%
GATCGTGAAGAGGAGCAAGG+AGG + chr2_2:23448334-23448353 Msa0244710:CDS 55.0%
TCGTGAAGAGGAGCAAGGAG+GGG + chr2_2:23448336-23448355 Msa0244710:CDS 55.0%
GGGAAGAGCGGAGGCAAGCA+TGG + chr2_2:23447881-23447900 Msa0244710:CDS 65.0%
GGAGCAAGGAGGGGAGAGCT+TGG + chr2_2:23448345-23448364 Msa0244710:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 23445030 23449953 23445030 ID=Msa0244710;Name=Msa0244710
chr2_2 mRNA 23445030 23449953 23445030 ID=Msa0244710-mRNA-1;Parent=Msa0244710;Name=Msa0244710-mRNA-1;_AED=0.02;_eAED=0.02;_QI=227|1|1|1|0.85|0.75|8|196|921
chr2_2 exon 23445030 23445209 23445030 ID=Msa0244710-mRNA-1:exon:8929;Parent=Msa0244710-mRNA-1
chr2_2 exon 23445464 23446740 23445464 ID=Msa0244710-mRNA-1:exon:8930;Parent=Msa0244710-mRNA-1
chr2_2 exon 23446971 23447092 23446971 ID=Msa0244710-mRNA-1:exon:8931;Parent=Msa0244710-mRNA-1
chr2_2 exon 23447387 23447962 23447387 ID=Msa0244710-mRNA-1:exon:8932;Parent=Msa0244710-mRNA-1
chr2_2 exon 23448084 23448564 23448084 ID=Msa0244710-mRNA-1:exon:8933;Parent=Msa0244710-mRNA-1
chr2_2 exon 23448656 23448800 23448656 ID=Msa0244710-mRNA-1:exon:8934;Parent=Msa0244710-mRNA-1
chr2_2 exon 23449448 23449541 23449448 ID=Msa0244710-mRNA-1:exon:8935;Parent=Msa0244710-mRNA-1
chr2_2 exon 23449640 23449953 23449640 ID=Msa0244710-mRNA-1:exon:8936;Parent=Msa0244710-mRNA-1
chr2_2 five_prime_UTR 23445030 23445209 23445030 ID=Msa0244710-mRNA-1:five_prime_utr;Parent=Msa0244710-mRNA-1
chr2_2 five_prime_UTR 23445464 23445510 23445464 ID=Msa0244710-mRNA-1:five_prime_utr;Parent=Msa0244710-mRNA-1
chr2_2 CDS 23445511 23446740 23445511 ID=Msa0244710-mRNA-1:cds;Parent=Msa0244710-mRNA-1
chr2_2 CDS 23446971 23447092 23446971 ID=Msa0244710-mRNA-1:cds;Parent=Msa0244710-mRNA-1
chr2_2 CDS 23447387 23447962 23447387 ID=Msa0244710-mRNA-1:cds;Parent=Msa0244710-mRNA-1
chr2_2 CDS 23448084 23448564 23448084 ID=Msa0244710-mRNA-1:cds;Parent=Msa0244710-mRNA-1
chr2_2 CDS 23448656 23448800 23448656 ID=Msa0244710-mRNA-1:cds;Parent=Msa0244710-mRNA-1
chr2_2 CDS 23449448 23449541 23449448 ID=Msa0244710-mRNA-1:cds;Parent=Msa0244710-mRNA-1
chr2_2 CDS 23449640 23449757 23449640 ID=Msa0244710-mRNA-1:cds;Parent=Msa0244710-mRNA-1
chr2_2 three_prime_UTR 23449758 23449953 23449758 ID=Msa0244710-mRNA-1:three_prime_utr;Parent=Msa0244710-mRNA-1
Gene Sequence

>Msa0244710

ATGGCTTCTTCTGGTGTTGAAATTGCGACTTCTTCGCCTTTTGGTTGTGTTCTAAGGGACCGTAATCATCGTGATGGATGTAGAGAAAGTAGCAAAGTTAAGGCTACACATGCTGTTTTCCAAAGGAACATTAAGAACTTTGTCATGGACCACCTTAACACGTGCATTACAATGTCTTCTGATTCTGCAACAAACGAAAACAACGAGAGTCAAATGAAGAACAACAACAATAACAATGTTTCTTCTTGGGCTTCAAAAGGTAGCAACAATCTTGCAAGGCTTCGTTTGAAGAGAAACAATCACAATGGTATCATCAACAACAATAAGGATAACGAAAATGAGCCATCCTTGGCTTCGTTGATTAGTCCGAGACATTCGCGCCTTCTTGATAGATGGGCTGCGAGACAAGCTCGTGAGATGGTGTCGAATTTGGAGAATGAAACTGAATTGTTGTCGATTGACAACACGAACAATGACAACAACATGTCTGAAATTGTAAGGACATCTAGTTCTACCTCGGATGAATGTTCTTCGGAGAAATTGAACCTTGGTGCGTCTTCCCTTGTTCAATTATGGGAAAAGAGGCTTAACAATTCAAATGGATCCAAACCAAACACTCCAATGGAGAAAACAAGTCCAACGGGTGTGACAAGTGCAACTTGCAACAATGAGAATGTGTTTGTTGCTAACAGTCCAACTGGTGGTACAACTGCAACTTGCAACAATGAGAATGCGTTTGTTGTTGAAGAAAAAAGAGGTTCGGAACTAGGAGAGGGTTTTGAAGGACCGTTATCATCAGGGAATGAAGAATCGTTTTCGTTTTCTTCATTCACTGATTGGGAATCTGATAAGACAGGTGATCAGAGTAGGTTGTGTTCAGTTGATCAAAGTAGGAAGAATTCGTCCGAAAGTGATAGAGTTAGTGTTGCTGATATCATAAAGAAACTCACTGCTACAAGTCAAACTCAGAGTTCACCTCCATCTTCTGGTGATGACAATGATCATGAAGGATGTGGTGGTAGCAGTGTGGCAAGTTCTCCTCGTAAAGATTTTGCACCAGAACTTTCAGAGCAAAGAGCCTTTCCTCAGGTTACTTGTTCAAAACGAATTAGAGGACGTCGAGCTTTCAATGATTTGCTTATGCAGTTGGAGCGTGATAGGCATGGGGAGCTAAAGAACTTGGCCGAACGTGGAACTGTCTCCAAGTTCGCACAAAAAGGTCGCATTCAGGCATTACTTCGACTTAAATTGTTACGTGGCGCGGCAGCTAATGTTCCATCACACCAGAAATCAACATCATCTGAAGTAAACAGACAAGTACAACCATACGGATCTGCCATTATGCAACTAAGGAAAAATTTTAGCATCAGGGCCAAAGAAAGAAATACAGTACAGGCAGAAGTAGTGAACACACGAAGTCCTCCCAAAGAGATAGTAAACACACAATTACAAAACTCTACCACTGCTGATCAAATCAGCAAAGACACAAGTGGCCAGATTGTGCATGGAACTGTCAGTCACGCCATAGAATTGACAAAGTCGGAGACTCAGACTAGAGAAGAAGATCATCCAAGCTCAACTGTCATGTCTCAAGAAACATGTTTTGAGGCTCAGCGTGATTACTGTGAGGAAACTTCTGAGGAAACTGCATCAATAACAGATTCAAATTTTAACGAGAAAAAGGAAATTAACCAGCAAAATGATGAAAACAGTTATGATTGTGCAGTAGAAGAGGAAGGGAGTAACCAAAACTATGCTGAAAGCAGTTATGAAGAGATGGTGGAAGAGAATTATGATGAAAATAATTATGACTGGATCAGTGAAATTTCTCGACCGAGAAGCTATTGGGAAGAGCGGAGGCAAGCATGGTATAGAGAGATGCTTGACACCGGTTCTCCAAATGAAGATATACAGGTGCTTCTTCAAAGAAGAACAGTTTCAACCTTCCTTTCTAGTGGCTTCCGCGAAACAATGGATAGGTTGATGCAGTCTCATAAAGGAACACAAACACATCTAGTTAGCAGTCAAGATGATGAGATAGACAATGAAGGGTTGATGGCGTTTTTCCAAGAACACTTGTATCCTGGAAGATCTCCTCAAGAAAATGGAACAGATAGAACGGTAGATGAAGAAGAGGAAAGGGTAAATGAGGAGGAGGAGGAGAAGCAAGATGAGAAAGATCGTGAAGAGGAGCAAGGAGGGGAGAGCTTGGTTAGTAGTAGCTTGGTTAGTAGTTTGTGTCATGAAATCGGAGACTATTCTAATCAATCCTCATCATGGAGTTATAGAGACAATGAAGTTGGTGATGATTTTGATAGAGTAGCTTCTACATCTTCACAACCTTATCAATCTCAGTCTTCCTATCATGATAATCGGCCAAACTCCTCGTCTACCAATCATCATTCAATTGAAATGGATCTCATATATGATATGAGAGGCCATATGGAGCAACTTTATCAAGAGATGAGTGAACTAAGGAAATCAATAAAGAGTTGCATGGATATGCAGATGCAGATGCAGTTACAAAAATCCAATAACCAAAGGGTGCAAACAGCTGAAAAGGAAGAAAAGAAGTCACATAACAAGACTGGTAAGAAAGGAAACTGCTGCATTTGCCATGAGATGAAAGTTGACTCAGTTCTATACAGGTGTGGACACATGTGTGCATGTCTGAAATGTGCCAACGATTTACGGTGGACCAATGGAAAATGTCCAATATGTCGCGCTAAAATAGACGATGTTGTTCGAGTTTATCTTGAAGTATAG

Protein sequence

>Msa0244710

MASSGVEIATSSPFGCVLRDRNHRDGCRESSKVKATHAVFQRNIKNFVMDHLNTCITMSSDSATNENNESQMKNNNNNNVSSWASKGSNNLARLRLKRNNHNGIINNNKDNENEPSLASLISPRHSRLLDRWAARQAREMVSNLENETELLSIDNTNNDNNMSEIVRTSSSTSDECSSEKLNLGASSLVQLWEKRLNNSNGSKPNTPMEKTSPTGVTSATCNNENVFVANSPTGGTTATCNNENAFVVEEKRGSELGEGFEGPLSSGNEESFSFSSFTDWESDKTGDQSRLCSVDQSRKNSSESDRVSVADIIKKLTATSQTQSSPPSSGDDNDHEGCGGSSVASSPRKDFAPELSEQRAFPQVTCSKRIRGRRAFNDLLMQLERDRHGELKNLAERGTVSKFAQKGRIQALLRLKLLRGAAANVPSHQKSTSSEVNRQVQPYGSAIMQLRKNFSIRAKERNTVQAEVVNTRSPPKEIVNTQLQNSTTADQISKDTSGQIVHGTVSHAIELTKSETQTREEDHPSSTVMSQETCFEAQRDYCEETSEETASITDSNFNEKKEINQQNDENSYDCAVEEEGSNQNYAESSYEEMVEENYDENNYDWISEISRPRSYWEERRQAWYREMLDTGSPNEDIQVLLQRRTVSTFLSSGFRETMDRLMQSHKGTQTHLVSSQDDEIDNEGLMAFFQEHLYPGRSPQENGTDRTVDEEEERVNEEEEEKQDEKDREEEQGGESLVSSSLVSSLCHEIGDYSNQSSSWSYRDNEVGDDFDRVASTSSQPYQSQSSYHDNRPNSSSTNHHSIEMDLIYDMRGHMEQLYQEMSELRKSIKSCMDMQMQMQLQKSNNQRVQTAEKEEKKSHNKTGKKGNCCICHEMKVDSVLYRCGHMCACLKCANDLRWTNGKCPICRAKIDDVVRVYLEV*