AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1222970


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1222970 MtrunA17_Chr4g0074591 96.944 360 10 1 1 360 1 359 0.0 715
Msa1222970 MtrunA17_Chr2g0288101 69.459 370 102 2 12 379 2 362 0.0 528
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1222970 AT4G04880.1 66.575 362 110 1 13 374 1 351 2.12e-176 495
Msa1222970 AT4G04880.2 61.637 391 110 2 13 374 1 380 2.50e-170 481
Msa1222970 AT4G04880.3 68.889 270 73 1 13 282 1 259 1.87e-131 378

Find 120 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATTGGAAATGAGGCATTT+TGG 0.146875 8_1:+87371851 Msa1222970:CDS
TCAATTGATGCTCATCATTT+TGG 0.186433 8_1:+87372647 Msa1222970:CDS
ATCTGTCAGTTCGGTTGATC+TGG 0.224791 8_1:+87371578 Msa1222970:CDS
ACTAAAGAATAGATTGAAAT+TGG 0.226773 8_1:+87373502 Msa1222970:three_prime_UTR
CATGCATGTCCAATCCTTTC+AGG 0.257021 8_1:-87372206 None:intergenic
TTCGATGTTATGATGCTTAC+TGG 0.265041 8_1:+87373405 Msa1222970:three_prime_UTR
GTTTCAGTGGCTAGTGAAAT+TGG 0.268013 8_1:+87373580 Msa1222970:three_prime_UTR
AAAATTGCTGCTTCTTCATT+TGG 0.270139 8_1:+87373123 Msa1222970:CDS
GCATTTAACTGGACTGTTCT+TGG 0.273826 8_1:+87373555 Msa1222970:three_prime_UTR
CTTCTTAACAAGTTCTCTTA+AGG 0.289773 8_1:-87373826 None:intergenic
CTTTCTTGCGTCTTGTATCT+TGG 0.292422 8_1:-87370316 None:intergenic
GCATAATAATATCATTAATA+TGG 0.293607 8_1:-87373750 None:intergenic
AATGAGTTAACAAGGTTGTT+TGG 0.296616 8_1:+87373472 Msa1222970:three_prime_UTR
GATGGTGTGGATGTGTATTT+AGG 0.311844 8_1:+87373379 Msa1222970:three_prime_UTR
ACTAAAATTTGCTCGAGAAC+AGG 0.322893 8_1:+87372030 Msa1222970:CDS
TTATAAATCAGGCATTTAAC+TGG 0.323277 8_1:+87373544 Msa1222970:three_prime_UTR
GTTGTTGGAATTGACCTCTC+TGG 0.326172 8_1:+87371875 Msa1222970:CDS
TTTGTTTGACATCAAACATT+AGG 0.333028 8_1:+87372609 Msa1222970:CDS
ATGAGTTAACAAGGTTGTTT+GGG 0.333110 8_1:+87373473 Msa1222970:three_prime_UTR
TGCTAAAGGTTTGGGTGATA+AGG 0.334141 8_1:+87370511 Msa1222970:CDS
CAGCGAACTTGCTAAAGGTT+TGG 0.334780 8_1:+87370502 Msa1222970:intron
TATATTTGACCGCTTGAGAT+AGG 0.339541 8_1:+87373712 Msa1222970:three_prime_UTR
CAGGTCAAGTGAAGTCATTT+TGG 0.342711 8_1:+87373614 Msa1222970:three_prime_UTR
AGAGCGTTTGCTCATTCCTT+TGG 0.345646 8_1:-87371526 None:intergenic
AGCGAACTTGCTAAAGGTTT+GGG 0.357859 8_1:+87370503 Msa1222970:intron
TGAGGATAACATGCTGGACT+TGG 0.366709 8_1:-87370550 None:intergenic
TTCTTAACAAGTTCTCTTAA+GGG 0.375495 8_1:-87373825 None:intergenic
GCTAAAGGTTTGGGTGATAA+GGG 0.384911 8_1:+87370512 Msa1222970:CDS
TATATTGAAGCTGTACTTGA+AGG 0.391559 8_1:+87371549 Msa1222970:CDS
TGAGCATGCAATTCTACCTT+TGG 0.392099 8_1:-87370369 None:intergenic
TGCTGTTGAATTTATATTTG+CGG 0.392971 8_1:+87373272 Msa1222970:CDS
GCTGAAATCGTCTAAAATTC+CGG 0.393662 8_1:+87372256 Msa1222970:CDS
TTTGTATTCGTTGGAGAGAC+TGG 0.404259 8_1:-87373103 None:intergenic
CTGAGAGTATAGGGTTTGAA+TGG 0.407987 8_1:-87371632 None:intergenic
TAGCTGAGACTGAGAGTATA+GGG 0.413511 8_1:-87371641 None:intergenic
TTGTTGGAATTGACCTCTCT+GGG 0.414570 8_1:+87371876 Msa1222970:CDS
CTTAAGAGAACTTGTTAAGA+AGG 0.416179 8_1:+87373827 Msa1222970:three_prime_UTR
AAATGATGAGCATCAATTGA+TGG 0.417937 8_1:-87372644 None:intergenic
TAGTTTAGCAGCAAATGATC+TGG 0.425802 8_1:+87373329 Msa1222970:CDS
TCATGTATCTCCCTCAAGTT+AGG 0.430418 8_1:-87372167 None:intergenic
TTGTTAGGTGCCTAACTTGA+GGG 0.431636 8_1:+87372157 Msa1222970:intron
GACTTTCTTCCTGAAAGGAT+TGG 0.446859 8_1:+87372197 Msa1222970:CDS
GTAGCTGAGACTGAGAGTAT+AGG 0.447249 8_1:-87371642 None:intergenic
CAAGCGGTCAAATATAACTT+TGG 0.465490 8_1:-87373705 None:intergenic
GGCTTCTCTTAAGCATTGAC+CGG 0.466053 8_1:+87371709 Msa1222970:CDS
ATATTTGACCGCTTGAGATA+GGG 0.473201 8_1:+87373713 Msa1222970:three_prime_UTR
TGGACATGCATGTTTCTTTG+AGG 0.475411 8_1:+87372217 Msa1222970:CDS
TGCTTACTGGGTATACAGTA+AGG 0.476050 8_1:+87373418 Msa1222970:three_prime_UTR
TTTCCCAGCGAACTTGCTAA+AGG 0.480413 8_1:+87370497 Msa1222970:intron
CTGCTTCCGTTGTCTCCCTC+CGG 0.484826 8_1:-87371728 None:intergenic
GAATTGCATGCTCACCTCAA+TGG 0.485177 8_1:+87370378 Msa1222970:CDS
TCTGTCAGTTCGGTTGATCT+GGG 0.486875 8_1:+87371579 Msa1222970:CDS
GAAATTGGAATGGTCAGGTC+AGG 0.495433 8_1:+87373595 Msa1222970:three_prime_UTR
TGCGGATAACACGGCAAAAG+AGG 0.497210 8_1:+87373290 Msa1222970:CDS
GAAAGGAGAGTGAGATGGAG+TGG 0.497436 8_1:+87370334 Msa1222970:CDS
TTTAACTGGACTGTTCTTGG+AGG 0.506134 8_1:+87373558 Msa1222970:three_prime_UTR
GGAATCCAGCCGTTGGTGAA+TGG 0.506410 8_1:+87371897 Msa1222970:CDS
TTGAGGAGGAACACTGGAGA+AGG 0.507250 8_1:+87372234 Msa1222970:CDS
TCTAGGTACAATGACGTACA+TGG 0.509146 8_1:+87373355 Msa1222970:exon
TGCTTGACTTTCTTCCTGAA+AGG 0.513219 8_1:+87372192 Msa1222970:CDS
TCATCAGTACACAGGACTAC+AGG 0.514472 8_1:-87373063 None:intergenic
AATATTGGATTGAGAAGCAT+AGG 0.514496 8_1:+87370194 Msa1222970:five_prime_UTR
AAAGGTATGTGTTGATAAAG+TGG 0.514853 8_1:+87373662 Msa1222970:three_prime_UTR
CTAAAATTTGCTCGAGAACA+GGG 0.517085 8_1:+87372031 Msa1222970:CDS
GGAGACAACGGAAGCAGCAA+TGG 0.518470 8_1:+87371734 Msa1222970:CDS
TCATGCTTGCATTGGAAATG+AGG 0.520953 8_1:+87371843 Msa1222970:CDS
GCTGTAGGTCATGCTTGCAT+TGG 0.522986 8_1:+87371835 Msa1222970:intron
ACTGTTCTTGGAGGTTTCAG+TGG 0.525239 8_1:+87373567 Msa1222970:three_prime_UTR
CAGAAGTGTGGAGTCTCTGA+TGG 0.532446 8_1:-87370403 None:intergenic
GAGGATAACATGCTGGACTT+GGG 0.533426 8_1:-87370549 None:intergenic
ATAGAAGTAATGAAAATACT+AGG 0.534541 8_1:+87371670 Msa1222970:CDS
CTCTCTGGGAATCCAGCCGT+TGG 0.535949 8_1:+87371890 Msa1222970:CDS
CAAGATACAAGACGCAAGAA+AGG 0.535955 8_1:+87370317 Msa1222970:CDS
TTATATAGGCCTTGGAAGGA+AGG 0.539594 8_1:+87373227 Msa1222970:intron
ATATACCATTCACCAACGGC+TGG 0.542162 8_1:-87371902 None:intergenic
TTTGTTAGGTGCCTAACTTG+AGG 0.545284 8_1:+87372156 Msa1222970:intron
CAAACATCTCCTTCCTTCCA+AGG 0.549364 8_1:-87373236 None:intergenic
CATGATCAGTTGTAAGAATG+TGG 0.551417 8_1:-87371079 None:intergenic
GATATTATATAGGCCTTGGA+AGG 0.554197 8_1:+87373223 Msa1222970:intron
GTTTCTTTGAGGAGGAACAC+TGG 0.554373 8_1:+87372228 Msa1222970:CDS
AGCAAATGATCTGGAGCTCT+AGG 0.556308 8_1:+87373338 Msa1222970:CDS
CGCAAGAAAGGAGAGTGAGA+TGG 0.559653 8_1:+87370329 Msa1222970:CDS
AGGTCTAAGATCTGTCAGTT+CGG 0.564884 8_1:+87371569 Msa1222970:CDS
CTAGTGAAATTGGAATGGTC+AGG 0.568231 8_1:+87373590 Msa1222970:three_prime_UTR
TTCTCTTAAGCATTGACCGG+AGG 0.575999 8_1:+87371712 Msa1222970:CDS
TCTCTTAAGCATTGACCGGA+GGG 0.576547 8_1:+87371713 Msa1222970:CDS
TCGATGTTATGATGCTTACT+GGG 0.579011 8_1:+87373406 Msa1222970:three_prime_UTR
ACATGCATGTTTCTTTGAGG+AGG 0.579495 8_1:+87372220 Msa1222970:CDS
ATTTATATTTGCGGATAACA+CGG 0.583351 8_1:+87373281 Msa1222970:CDS
TATTTGACCGCTTGAGATAG+GGG 0.583421 8_1:+87373714 Msa1222970:three_prime_UTR
TAAGGGACGCAACTAACTGC+TGG 0.589077 8_1:+87373436 Msa1222970:three_prime_UTR
ATGAGCATCAATTGATGGAA+CGG 0.591328 8_1:-87372639 None:intergenic
CTAGGTACAATGACGTACAT+GGG 0.594848 8_1:+87373356 Msa1222970:exon
AGTGGCTAGTGAAATTGGAA+TGG 0.597592 8_1:+87373585 Msa1222970:three_prime_UTR
TAGTAGACAATGAGTTAACA+AGG 0.599067 8_1:+87373464 Msa1222970:three_prime_UTR
TACAATGACGTACATGGGGA+TGG 0.600289 8_1:+87373361 Msa1222970:three_prime_UTR
TTAACTTTGATGAGCTCGTG+TGG 0.601630 8_1:+87370279 Msa1222970:five_prime_UTR
GTGGTGTATGTCAATTCCAA+AGG 0.611484 8_1:+87370353 Msa1222970:CDS
ATTTGACCGCTTGAGATAGG+GGG 0.614834 8_1:+87373715 Msa1222970:three_prime_UTR
GTCAGAGAATGTTGTATATG+TGG 0.621848 8_1:+87371389 Msa1222970:CDS
GTATTCGTTGGAGAGACTGG+TGG 0.624898 8_1:-87373100 None:intergenic
TGTAACTCTTCACTGTGGAG+AGG 0.625040 8_1:+87372060 Msa1222970:CDS
AGACGATCGTTCATTATCTG+AGG 0.628996 8_1:+87371034 Msa1222970:intron
TGACGTACATGGGGATGGTG+TGG 0.629757 8_1:+87373366 Msa1222970:three_prime_UTR
ATTTGAAACATACAGAAGTG+TGG 0.630716 8_1:-87370415 None:intergenic
TGAGTTAACAAGGTTGTTTG+GGG 0.635524 8_1:+87373474 Msa1222970:three_prime_UTR
AAAATAGGAAATGATAACAA+GGG 0.637400 8_1:+87373802 Msa1222970:three_prime_UTR
CATTGACCGGAGGGAGACAA+CGG 0.639400 8_1:+87371722 Msa1222970:CDS
GCTTACTGGGTATACAGTAA+GGG 0.640133 8_1:+87373419 Msa1222970:three_prime_UTR
TCTTACAACTGATCATGCGA+CGG 0.642944 8_1:+87371085 Msa1222970:CDS
ATTATTATGCCCATGCAACA+CGG 0.643033 8_1:+87373763 Msa1222970:three_prime_UTR
CAACGGCTGGATTCCCAGAG+AGG 0.647404 8_1:-87371889 None:intergenic
GAGTTAACAAGGTTGTTTGG+GGG 0.667687 8_1:+87373475 Msa1222970:three_prime_UTR
CACCTGAGTCATCAGTACAC+AGG 0.669280 8_1:-87373071 None:intergenic
GGAGTTGAGAACTACTCCAA+AGG 0.673352 8_1:+87371410 Msa1222970:CDS
AGTCTCTGATGGATCCATTG+AGG 0.676628 8_1:-87370392 None:intergenic
GTCCTGTGTACTGATGACTC+AGG 0.685762 8_1:+87373069 Msa1222970:CDS
AATGATATACCATTCACCAA+CGG 0.687223 8_1:-87371906 None:intergenic
TAGGTACAATGACGTACATG+GGG 0.693449 8_1:+87373357 Msa1222970:exon
CTTTATGTAACTCTTCACTG+TGG 0.703519 8_1:+87372055 Msa1222970:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAATTAGTTTATAAATC+AGG + chr8_1:87373533-87373552 Msa1222970:three_prime_UTR 10.0%
!!! GGTTTAAATATAATTTTCTT+TGG - chr8_1:87370866-87370885 None:intergenic 15.0%
!! TTTAATTGTTTGGTTATTTA+CGG - chr8_1:87372384-87372403 None:intergenic 15.0%
!! TAAATAACCAAACAATTAAA+CGG + chr8_1:87372384-87372403 Msa1222970:intron 15.0%
!! GCATAATAATATCATTAATA+TGG - chr8_1:87373753-87373772 None:intergenic 15.0%
!!! AAAAGACCTTATTTAAAAAT+AGG + chr8_1:87373787-87373806 Msa1222970:three_prime_UTR 15.0%
!!! TCATTTCCTATTTTTAAATA+AGG - chr8_1:87373796-87373815 None:intergenic 15.0%
!!! TCAATCCAATATTTTTATCA+AGG - chr8_1:87370187-87370206 None:intergenic 20.0%
!!! TCTTTTTACTCCAAATTAAA+TGG + chr8_1:87370661-87370680 Msa1222970:intron 20.0%
!! TTATATTTAAACCATTGAGA+AGG + chr8_1:87370873-87370892 Msa1222970:intron 20.0%
!! TAATGCAAATGCAATAAATT+TGG - chr8_1:87371330-87371349 None:intergenic 20.0%
!! AATTTATTGCATTTGCATTA+TGG + chr8_1:87371330-87371349 Msa1222970:intron 20.0%
!!! ATATTTTCTTCACAAATTCA+TGG - chr8_1:87371478-87371497 None:intergenic 20.0%
!! ATAGAAGTAATGAAAATACT+AGG + chr8_1:87371670-87371689 Msa1222970:CDS 20.0%
!!! ATTTGAAGTAAATACTATAG+AGG - chr8_1:87371944-87371963 None:intergenic 20.0%
!!! TGACTCAAATTTTTTTTGTT+AGG + chr8_1:87372142-87372161 Msa1222970:intron 20.0%
!! TTTATCATTTATGTCACTAA+AGG - chr8_1:87372303-87372322 None:intergenic 20.0%
!! TTAATTGTTTGGTTATTTAC+GGG - chr8_1:87372383-87372402 None:intergenic 20.0%
!! AAAATTGACAAAATAAAGGT+TGG - chr8_1:87372421-87372440 None:intergenic 20.0%
!! CTTCAAAATTGACAAAATAA+AGG - chr8_1:87372425-87372444 None:intergenic 20.0%
!!! TTTTGAAGTTTTATTTGATC+TGG + chr8_1:87372437-87372456 Msa1222970:intron 20.0%
!!! TTTGAAGTTTTATTTGATCT+GGG + chr8_1:87372438-87372457 Msa1222970:intron 20.0%
!! GATATAGAATATATGTAACT+TGG - chr8_1:87372565-87372584 None:intergenic 20.0%
!!! GAAAAAATGTTTCTTCTTTT+TGG + chr8_1:87372789-87372808 Msa1222970:intron 20.0%
!! TAAACATAAAAAGTGAAAAC+GGG - chr8_1:87372846-87372865 None:intergenic 20.0%
!! GTAAACATAAAAAGTGAAAA+CGG - chr8_1:87372847-87372866 None:intergenic 20.0%
!!! TGTTGATTGTGATATTATAT+AGG + chr8_1:87373213-87373232 Msa1222970:intron 20.0%
!! ACTAAAGAATAGATTGAAAT+TGG + chr8_1:87373502-87373521 Msa1222970:three_prime_UTR 20.0%
!!! TTGATAATTCTCTCAAAAAA+AGG + chr8_1:87373644-87373663 Msa1222970:three_prime_UTR 20.0%
!! AAAAATAGGAAATGATAACA+AGG + chr8_1:87373801-87373820 Msa1222970:three_prime_UTR 20.0%
!! AAAATAGGAAATGATAACAA+GGG + chr8_1:87373802-87373821 Msa1222970:three_prime_UTR 20.0%
!!! CCAATATTTTTATCAAGGAT+GGG - chr8_1:87370182-87370201 None:intergenic 25.0%
!!! TCCAATATTTTTATCAAGGA+TGG - chr8_1:87370183-87370202 None:intergenic 25.0%
!! AAAAGTAAAATTGAGAGTGT+TGG - chr8_1:87370465-87370484 None:intergenic 25.0%
! GTGATATACTGTAAAAGAAA+CGG - chr8_1:87370611-87370630 None:intergenic 25.0%
!! TTTGGAGTAAAAAGAAATGT+TGG - chr8_1:87370656-87370675 None:intergenic 25.0%
! TAAATACAGGCCATTTAATT+TGG - chr8_1:87370674-87370693 None:intergenic 25.0%
! TAAATGCTGGTAATAAATAC+AGG - chr8_1:87370687-87370706 None:intergenic 25.0%
! AATTTCTCTCTAATAAATGC+TGG - chr8_1:87370700-87370719 None:intergenic 25.0%
! AATACAATAACTAGAGATAG+AGG + chr8_1:87370836-87370855 Msa1222970:intron 25.0%
! ATACAATAACTAGAGATAGA+GGG + chr8_1:87370837-87370856 Msa1222970:intron 25.0%
! TTAATACATGACAGAATGTT+AGG + chr8_1:87370925-87370944 Msa1222970:intron 25.0%
! TAATACATGACAGAATGTTA+GGG + chr8_1:87370926-87370945 Msa1222970:intron 25.0%
! ATGAATAAAATACTGACAGT+AGG - chr8_1:87371307-87371326 None:intergenic 25.0%
! CTAGGAAAAAAATCTTTGTT+AGG + chr8_1:87371688-87371707 Msa1222970:CDS 25.0%
! AGTGTAATACACAAATCATT+TGG + chr8_1:87371765-87371784 Msa1222970:intron 25.0%
! GTGTAATACACAAATCATTT+GGG + chr8_1:87371766-87371785 Msa1222970:intron 25.0%
! TAAATACTATAGAGGAATCT+AGG - chr8_1:87371936-87371955 None:intergenic 25.0%
! TAACTTGGCAGTTAATAAAT+TGG - chr8_1:87372550-87372569 None:intergenic 25.0%
!! ATATCATCTTCACAATTTTC+AGG + chr8_1:87372580-87372599 Msa1222970:intron 25.0%
! TTTGTTTGACATCAAACATT+AGG + chr8_1:87372609-87372628 Msa1222970:CDS 25.0%
! TGTATATTAGACTTTGATCA+AGG + chr8_1:87372969-87372988 Msa1222970:intron 25.0%
! TGCTGTTGAATTTATATTTG+CGG + chr8_1:87373272-87373291 Msa1222970:CDS 25.0%
! ATTTATATTTGCGGATAACA+CGG + chr8_1:87373281-87373300 Msa1222970:CDS 25.0%
! TTATAAATCAGGCATTTAAC+TGG + chr8_1:87373544-87373563 Msa1222970:three_prime_UTR 25.0%
! TTCTTAACAAGTTCTCTTAA+GGG - chr8_1:87373828-87373847 None:intergenic 25.0%
CCCATCCTTGATAAAAATAT+TGG + chr8_1:87370179-87370198 Msa1222970:five_prime_UTR 30.0%
! AATATTGGATTGAGAAGCAT+AGG + chr8_1:87370194-87370213 Msa1222970:five_prime_UTR 30.0%
! ATTTGAAACATACAGAAGTG+TGG - chr8_1:87370418-87370437 None:intergenic 30.0%
!! AAATTGAGAGTGTTGGAAAA+CGG - chr8_1:87370458-87370477 None:intergenic 30.0%
! AAGGGAAATACATACTTTTG+AGG - chr8_1:87370571-87370590 None:intergenic 30.0%
ACACGATTACTCCAAATTTA+GGG + chr8_1:87370629-87370648 Msa1222970:intron 30.0%
AGGTGCTAGAATATCATATT+AGG + chr8_1:87370748-87370767 Msa1222970:intron 30.0%
TGCTAGAATATCATATTAGG+TGG + chr8_1:87370751-87370770 Msa1222970:intron 30.0%
GTAAGAATAGTAGTCTAGAT+GGG + chr8_1:87370810-87370829 Msa1222970:intron 30.0%
TAAGAATAGTAGTCTAGATG+GGG + chr8_1:87370811-87370830 Msa1222970:intron 30.0%
TAATCAAGCGGAAAATACTT+GGG - chr8_1:87371281-87371300 None:intergenic 30.0%
ATGCAGAAAAATGAATCCAA+AGG + chr8_1:87371510-87371529 Msa1222970:intron 30.0%
TATATTGAAGCTGTACTTGA+AGG + chr8_1:87371549-87371568 Msa1222970:CDS 30.0%
! TTTTTAATCTCTTCGCTGAA+AGG - chr8_1:87371612-87371631 None:intergenic 30.0%
AAATCATTTGGGCAAACTTA+AGG + chr8_1:87371777-87371796 Msa1222970:intron 30.0%
CAAAGAAGCAGATTATTCAA+AGG - chr8_1:87371816-87371835 None:intergenic 30.0%
AATGATATACCATTCACCAA+CGG - chr8_1:87371909-87371928 None:intergenic 30.0%
!! TTTTATTTGATCTGGGAAAG+TGG + chr8_1:87372445-87372464 Msa1222970:intron 30.0%
AAATGATGAGCATCAATTGA+TGG - chr8_1:87372647-87372666 None:intergenic 30.0%
! TCAATTGATGCTCATCATTT+TGG + chr8_1:87372647-87372666 Msa1222970:CDS 30.0%
ATGAAGTTGAGAATACAATG+AGG - chr8_1:87372732-87372751 None:intergenic 30.0%
!!! TCGAGATTTTAGAGTAGAAA+TGG + chr8_1:87372752-87372771 Msa1222970:intron 30.0%
! GATGAGAAATTGTACTTTTC+TGG - chr8_1:87372909-87372928 None:intergenic 30.0%
! AAAATTGCTGCTTCTTCATT+TGG + chr8_1:87373123-87373142 Msa1222970:CDS 30.0%
TTGTGATATTATATAGGCCT+TGG + chr8_1:87373219-87373238 Msa1222970:intron 30.0%
TAGTAGACAATGAGTTAACA+AGG + chr8_1:87373464-87373483 Msa1222970:three_prime_UTR 30.0%
AATGAGTTAACAAGGTTGTT+TGG + chr8_1:87373472-87373491 Msa1222970:three_prime_UTR 30.0%
ATGAGTTAACAAGGTTGTTT+GGG + chr8_1:87373473-87373492 Msa1222970:three_prime_UTR 30.0%
! AAAGGTATGTGTTGATAAAG+TGG + chr8_1:87373662-87373681 Msa1222970:three_prime_UTR 30.0%
CTTCTTAACAAGTTCTCTTA+AGG - chr8_1:87373829-87373848 None:intergenic 30.0%
!! CTTAAGAGAACTTGTTAAGA+AGG + chr8_1:87373827-87373846 Msa1222970:three_prime_UTR 30.0%
!! AATTGAGAGTGTTGGAAAAC+GGG - chr8_1:87370457-87370476 None:intergenic 35.0%
!! TACTTTTGAGGATAACATGC+TGG - chr8_1:87370559-87370578 None:intergenic 35.0%
GTAAAAGAGTGAGAATGGAA+GGG - chr8_1:87370589-87370608 None:intergenic 35.0%
AAACGGTAAAAGAGTGAGAA+TGG - chr8_1:87370594-87370613 None:intergenic 35.0%
CACACGATTACTCCAAATTT+AGG + chr8_1:87370628-87370647 Msa1222970:intron 35.0%
GAAATGTTGGTCCCTAAATT+TGG - chr8_1:87370643-87370662 None:intergenic 35.0%
AAATTAGATAGCCCATGTAG+TGG + chr8_1:87370715-87370734 Msa1222970:intron 35.0%
!! TAAGAGATTTGTTGAAGCAG+CGG + chr8_1:87370788-87370807 Msa1222970:intron 35.0%
GGTAAGAATAGTAGTCTAGA+TGG + chr8_1:87370809-87370828 Msa1222970:intron 35.0%
TGCTTCTAAATCCTTCTCAA+TGG - chr8_1:87370887-87370906 None:intergenic 35.0%
GAGAAGGATTTAGAAGCAAA+TGG + chr8_1:87370889-87370908 Msa1222970:intron 35.0%
! CGGTTGAGTCTTTTTACATT+AGG - chr8_1:87370980-87370999 None:intergenic 35.0%
ATAACCAACGTTAGCAAAAG+CGG - chr8_1:87371000-87371019 None:intergenic 35.0%
CATGATCAGTTGTAAGAATG+TGG - chr8_1:87371082-87371101 None:intergenic 35.0%
CTAATCAAGCGGAAAATACT+TGG - chr8_1:87371282-87371301 None:intergenic 35.0%
TGGTAGCAACTTCTATATAC+AGG + chr8_1:87371350-87371369 Msa1222970:intron 35.0%
GTCAGAGAATGTTGTATATG+TGG + chr8_1:87371389-87371408 Msa1222970:CDS 35.0%
ACTACTCCAAAGGTAAAGAA+AGG + chr8_1:87371420-87371439 Msa1222970:intron 35.0%
TGAGATCCTTTCTTTACCTT+TGG - chr8_1:87371429-87371448 None:intergenic 35.0%
! ATAATCTGCTTCTTTGCTGT+AGG + chr8_1:87371820-87371839 Msa1222970:intron 35.0%
!! CATTGGAAATGAGGCATTTT+GGG + chr8_1:87371852-87371871 Msa1222970:CDS 35.0%
!! ATTGGAAATGAGGCATTTTG+GGG + chr8_1:87371853-87371872 Msa1222970:CDS 35.0%
ATTCCTGGTTTATCATTTGC+AGG + chr8_1:87371990-87372009 Msa1222970:intron 35.0%
TTCCTGGTTTATCATTTGCA+GGG + chr8_1:87371991-87372010 Msa1222970:intron 35.0%
! ACTAAAATTTGCTCGAGAAC+AGG + chr8_1:87372030-87372049 Msa1222970:CDS 35.0%
! CTAAAATTTGCTCGAGAACA+GGG + chr8_1:87372031-87372050 Msa1222970:CDS 35.0%
CTTTATGTAACTCTTCACTG+TGG + chr8_1:87372055-87372074 Msa1222970:CDS 35.0%
AGTGAAACAACACTAGTAAC+AGG - chr8_1:87372106-87372125 None:intergenic 35.0%
!! TGTTACTAGTGTTGTTTCAC+TGG + chr8_1:87372105-87372124 Msa1222970:intron 35.0%
! GCTGAAATCGTCTAAAATTC+CGG + chr8_1:87372256-87372275 Msa1222970:CDS 35.0%
ATTCAACTTGCAAGTCTAAC+CGG - chr8_1:87372278-87372297 None:intergenic 35.0%
! GTGATGTACTGTGATTTGTA+TGG + chr8_1:87372339-87372358 Msa1222970:intron 35.0%
ACGGGTAAAAATTCTTCTTG+TGG - chr8_1:87372365-87372384 None:intergenic 35.0%
TGCAGAACCGTTTAATTGTT+TGG - chr8_1:87372394-87372413 None:intergenic 35.0%
TCTCATTTCTACTGATCATC+CGG + chr8_1:87372486-87372505 Msa1222970:intron 35.0%
ATGAGCATCAATTGATGGAA+CGG - chr8_1:87372642-87372661 None:intergenic 35.0%
!! TTGATGCTCATCATTTTGGT+AGG + chr8_1:87372651-87372670 Msa1222970:intron 35.0%
!! GAGGAAATTTAGCTTGAAGA+GGG - chr8_1:87372869-87372888 None:intergenic 35.0%
!! AGAGGAAATTTAGCTTGAAG+AGG - chr8_1:87372870-87372889 None:intergenic 35.0%
TGAGTAGAATGACATCAGAA+GGG - chr8_1:87372947-87372966 None:intergenic 35.0%
TTGAGTAGAATGACATCAGA+AGG - chr8_1:87372948-87372967 None:intergenic 35.0%
! AGCAGCAATTTTGTATTCGT+TGG - chr8_1:87373115-87373134 None:intergenic 35.0%
GATATTATATAGGCCTTGGA+AGG + chr8_1:87373223-87373242 Msa1222970:intron 35.0%
TAGTTTAGCAGCAAATGATC+TGG + chr8_1:87373329-87373348 Msa1222970:CDS 35.0%
TTCGATGTTATGATGCTTAC+TGG + chr8_1:87373405-87373424 Msa1222970:three_prime_UTR 35.0%
TCGATGTTATGATGCTTACT+GGG + chr8_1:87373406-87373425 Msa1222970:three_prime_UTR 35.0%
TGAGTTAACAAGGTTGTTTG+GGG + chr8_1:87373474-87373493 Msa1222970:three_prime_UTR 35.0%
!! AGGTCAAGTGAAGTCATTTT+GGG + chr8_1:87373615-87373634 Msa1222970:three_prime_UTR 35.0%
CAAGCGGTCAAATATAACTT+TGG - chr8_1:87373708-87373727 None:intergenic 35.0%
TATATTTGACCGCTTGAGAT+AGG + chr8_1:87373712-87373731 Msa1222970:three_prime_UTR 35.0%
ATATTTGACCGCTTGAGATA+GGG + chr8_1:87373713-87373732 Msa1222970:three_prime_UTR 35.0%
ATTATTATGCCCATGCAACA+CGG + chr8_1:87373763-87373782 Msa1222970:three_prime_UTR 35.0%
TTAACTTTGATGAGCTCGTG+TGG + chr8_1:87370279-87370298 Msa1222970:five_prime_UTR 40.0%
CTTTCTTGCGTCTTGTATCT+TGG - chr8_1:87370319-87370338 None:intergenic 40.0%
CAAGATACAAGACGCAAGAA+AGG + chr8_1:87370317-87370336 Msa1222970:CDS 40.0%
GTGGTGTATGTCAATTCCAA+AGG + chr8_1:87370353-87370372 Msa1222970:CDS 40.0%
TGAGCATGCAATTCTACCTT+TGG - chr8_1:87370372-87370391 None:intergenic 40.0%
!! ATTGAGAGTGTTGGAAAACG+GGG - chr8_1:87370456-87370475 None:intergenic 40.0%
AAACCTTTAGCAAGTTCGCT+GGG - chr8_1:87370503-87370522 None:intergenic 40.0%
!! AGCGAACTTGCTAAAGGTTT+GGG + chr8_1:87370503-87370522 Msa1222970:intron 40.0%
TGCTAAAGGTTTGGGTGATA+AGG + chr8_1:87370511-87370530 Msa1222970:CDS 40.0%
GCTAAAGGTTTGGGTGATAA+GGG + chr8_1:87370512-87370531 Msa1222970:CDS 40.0%
GGTAAAAGAGTGAGAATGGA+AGG - chr8_1:87370590-87370609 None:intergenic 40.0%
!! GCTTTTGCTAACGTTGGTTA+TGG + chr8_1:87370999-87371018 Msa1222970:intron 40.0%
AGACGATCGTTCATTATCTG+AGG + chr8_1:87371034-87371053 Msa1222970:intron 40.0%
TCTTACAACTGATCATGCGA+CGG + chr8_1:87371085-87371104 Msa1222970:CDS 40.0%
AAGTATGTCTGACAGCACTT+GGG + chr8_1:87371126-87371145 Msa1222970:intron 40.0%
TGTCACCGTGACATTAAATC+TGG + chr8_1:87371157-87371176 Msa1222970:intron 40.0%
GTCACCGTGACATTAAATCT+GGG + chr8_1:87371158-87371177 Msa1222970:intron 40.0%
CATCCATGAGTACATTTGTG+TGG + chr8_1:87371223-87371242 Msa1222970:intron 40.0%
GTCACCGTGACATTAAATCT+GGG - chr8_1:87371158-87371177 None:intergenic 40.0%
TGTCACCGTGACATTAAATC+TGG - chr8_1:87371157-87371176 None:intergenic 40.0%
CTTCACAAATTCATGGACAC+AGG - chr8_1:87371471-87371490 None:intergenic 40.0%
! AGGTCTAAGATCTGTCAGTT+CGG + chr8_1:87371569-87371588 Msa1222970:CDS 40.0%
! CTGAGAGTATAGGGTTTGAA+TGG - chr8_1:87371635-87371654 None:intergenic 40.0%
! TAGCTGAGACTGAGAGTATA+GGG - chr8_1:87371644-87371663 None:intergenic 40.0%
TCATGCTTGCATTGGAAATG+AGG + chr8_1:87371843-87371862 Msa1222970:CDS 40.0%
!! GCATTGGAAATGAGGCATTT+TGG + chr8_1:87371851-87371870 Msa1222970:CDS 40.0%
TTGTTGGAATTGACCTCTCT+GGG + chr8_1:87371876-87371895 Msa1222970:CDS 40.0%
ATGCTTGAGCTCAAAATTCC+TGG + chr8_1:87371975-87371994 Msa1222970:intron 40.0%
AACCCTGCAAATGATAAACC+AGG - chr8_1:87371996-87372015 None:intergenic 40.0%
!! TCTCGAGCAAATTTTAGTGC+TGG - chr8_1:87372028-87372047 None:intergenic 40.0%
ACAACACTAGTAACAGGTAC+AGG - chr8_1:87372100-87372119 None:intergenic 40.0%
TTTGTTAGGTGCCTAACTTG+AGG + chr8_1:87372156-87372175 Msa1222970:intron 40.0%
TTGTTAGGTGCCTAACTTGA+GGG + chr8_1:87372157-87372176 Msa1222970:intron 40.0%
TCATGTATCTCCCTCAAGTT+AGG - chr8_1:87372170-87372189 None:intergenic 40.0%
TGCTTGACTTTCTTCCTGAA+AGG + chr8_1:87372192-87372211 Msa1222970:CDS 40.0%
GACTTTCTTCCTGAAAGGAT+TGG + chr8_1:87372197-87372216 Msa1222970:CDS 40.0%
TGGACATGCATGTTTCTTTG+AGG + chr8_1:87372217-87372236 Msa1222970:CDS 40.0%
! ACATGCATGTTTCTTTGAGG+AGG + chr8_1:87372220-87372239 Msa1222970:CDS 40.0%
AAGCATTCAAACTTAGCCAC+CGG - chr8_1:87372508-87372527 None:intergenic 40.0%
!!! TGTACTTTTCTGGTTCTGTG+AGG - chr8_1:87372899-87372918 None:intergenic 40.0%
AGTAGAATGACATCAGAAGG+GGG - chr8_1:87372945-87372964 None:intergenic 40.0%
GAGTAGAATGACATCAGAAG+GGG - chr8_1:87372946-87372965 None:intergenic 40.0%
! TCATGCTTTTGTTGATGCAG+TGG + chr8_1:87373020-87373039 Msa1222970:intron 40.0%
TTTGTATTCGTTGGAGAGAC+TGG - chr8_1:87373106-87373125 None:intergenic 40.0%
TTATATAGGCCTTGGAAGGA+AGG + chr8_1:87373227-87373246 Msa1222970:intron 40.0%
TCTAGGTACAATGACGTACA+TGG + chr8_1:87373355-87373374 Msa1222970:exon 40.0%
CTAGGTACAATGACGTACAT+GGG + chr8_1:87373356-87373375 Msa1222970:exon 40.0%
TAGGTACAATGACGTACATG+GGG + chr8_1:87373357-87373376 Msa1222970:exon 40.0%
GATGGTGTGGATGTGTATTT+AGG + chr8_1:87373379-87373398 Msa1222970:three_prime_UTR 40.0%
TGCTTACTGGGTATACAGTA+AGG + chr8_1:87373418-87373437 Msa1222970:three_prime_UTR 40.0%
GCTTACTGGGTATACAGTAA+GGG + chr8_1:87373419-87373438 Msa1222970:three_prime_UTR 40.0%
GAGTTAACAAGGTTGTTTGG+GGG + chr8_1:87373475-87373494 Msa1222970:three_prime_UTR 40.0%
GCATTTAACTGGACTGTTCT+TGG + chr8_1:87373555-87373574 Msa1222970:three_prime_UTR 40.0%
TTTAACTGGACTGTTCTTGG+AGG + chr8_1:87373558-87373577 Msa1222970:three_prime_UTR 40.0%
GTTTCAGTGGCTAGTGAAAT+TGG + chr8_1:87373580-87373599 Msa1222970:three_prime_UTR 40.0%
AGTGGCTAGTGAAATTGGAA+TGG + chr8_1:87373585-87373604 Msa1222970:three_prime_UTR 40.0%
CTAGTGAAATTGGAATGGTC+AGG + chr8_1:87373590-87373609 Msa1222970:three_prime_UTR 40.0%
! CAGGTCAAGTGAAGTCATTT+TGG + chr8_1:87373614-87373633 Msa1222970:three_prime_UTR 40.0%
TATTTGACCGCTTGAGATAG+GGG + chr8_1:87373714-87373733 Msa1222970:three_prime_UTR 40.0%
GAATTGCATGCTCACCTCAA+TGG + chr8_1:87370378-87370397 Msa1222970:CDS 45.0%
! AGTCTCTGATGGATCCATTG+AGG - chr8_1:87370395-87370414 None:intergenic 45.0%
!! TTTCCCAGCGAACTTGCTAA+AGG + chr8_1:87370497-87370516 Msa1222970:intron 45.0%
CAAACCTTTAGCAAGTTCGC+TGG - chr8_1:87370504-87370523 None:intergenic 45.0%
!! CAGCGAACTTGCTAAAGGTT+TGG + chr8_1:87370502-87370521 Msa1222970:intron 45.0%
GAGGATAACATGCTGGACTT+GGG - chr8_1:87370552-87370571 None:intergenic 45.0%
TGAGGATAACATGCTGGACT+TGG - chr8_1:87370553-87370572 None:intergenic 45.0%
TTCTCCAGTCTCCACTACAT+GGG - chr8_1:87370729-87370748 None:intergenic 45.0%
ATTAGGTGCGATCTTCTGCT+TGG - chr8_1:87370963-87370982 None:intergenic 45.0%
!! TCAACCGCTTTTGCTAACGT+TGG + chr8_1:87370993-87371012 Msa1222970:intron 45.0%
GAAGTATGTCTGACAGCACT+TGG + chr8_1:87371125-87371144 Msa1222970:intron 45.0%
GTGGCCCAGATTTAATGTCA+CGG - chr8_1:87371242-87371261 None:intergenic 45.0%
AAACGGCAATGTGTGTTGTG+TGG - chr8_1:87371184-87371203 None:intergenic 45.0%
! ACACATTGCCGTTTGCATCT+GGG + chr8_1:87371190-87371209 Msa1222970:intron 45.0%
GTACTCATGGATGTGTTGTG+TGG - chr8_1:87371216-87371235 None:intergenic 45.0%
GTGGCCCAGATTTAATGTCA+CGG + chr8_1:87371242-87371261 Msa1222970:intron 45.0%
GACAGTAGGCACTAATCAAG+CGG - chr8_1:87371293-87371312 None:intergenic 45.0%
GGAGTTGAGAACTACTCCAA+AGG + chr8_1:87371410-87371429 Msa1222970:CDS 45.0%
! AGAGCGTTTGCTCATTCCTT+TGG - chr8_1:87371529-87371548 None:intergenic 45.0%
ATCTGTCAGTTCGGTTGATC+TGG + chr8_1:87371578-87371597 Msa1222970:CDS 45.0%
TCTGTCAGTTCGGTTGATCT+GGG + chr8_1:87371579-87371598 Msa1222970:CDS 45.0%
! GTAGCTGAGACTGAGAGTAT+AGG - chr8_1:87371645-87371664 None:intergenic 45.0%
!! GGCTTCTCTTAAGCATTGAC+CGG + chr8_1:87371709-87371728 Msa1222970:CDS 45.0%
!! TTCTCTTAAGCATTGACCGG+AGG + chr8_1:87371712-87371731 Msa1222970:CDS 45.0%
!! TCTCTTAAGCATTGACCGGA+GGG + chr8_1:87371713-87371732 Msa1222970:CDS 45.0%
!!! ATGAGGCATTTTGGGGTTGT+TGG + chr8_1:87371860-87371879 Msa1222970:CDS 45.0%
GTTGTTGGAATTGACCTCTC+TGG + chr8_1:87371875-87371894 Msa1222970:CDS 45.0%
ATATACCATTCACCAACGGC+TGG - chr8_1:87371905-87371924 None:intergenic 45.0%
TGTAACTCTTCACTGTGGAG+AGG + chr8_1:87372060-87372079 Msa1222970:CDS 45.0%
!! ACTAGTGTTGTTTCACTGGC+AGG + chr8_1:87372109-87372128 Msa1222970:intron 45.0%
CATGCATGTCCAATCCTTTC+AGG - chr8_1:87372209-87372228 None:intergenic 45.0%
! GTTTCTTTGAGGAGGAACAC+TGG + chr8_1:87372228-87372247 Msa1222970:CDS 45.0%
CATTTCTACTGATCATCCGG+TGG + chr8_1:87372489-87372508 Msa1222970:intron 45.0%
GGTTCTGTGAGGTTCTTTAG+AGG - chr8_1:87372888-87372907 None:intergenic 45.0%
GTAGAATGACATCAGAAGGG+GGG - chr8_1:87372944-87372963 None:intergenic 45.0%
TCATCAGTACACAGGACTAC+AGG - chr8_1:87373066-87373085 None:intergenic 45.0%
CAAACATCTCCTTCCTTCCA+AGG - chr8_1:87373239-87373258 None:intergenic 45.0%
! AGCAAATGATCTGGAGCTCT+AGG + chr8_1:87373338-87373357 Msa1222970:CDS 45.0%
TACAATGACGTACATGGGGA+TGG + chr8_1:87373361-87373380 Msa1222970:three_prime_UTR 45.0%
TTAACAAGGTTGTTTGGGGG+TGG + chr8_1:87373478-87373497 Msa1222970:three_prime_UTR 45.0%
ACTGTTCTTGGAGGTTTCAG+TGG + chr8_1:87373567-87373586 Msa1222970:three_prime_UTR 45.0%
GAAATTGGAATGGTCAGGTC+AGG + chr8_1:87373595-87373614 Msa1222970:three_prime_UTR 45.0%
ATTTGACCGCTTGAGATAGG+GGG + chr8_1:87373715-87373734 Msa1222970:three_prime_UTR 45.0%
CGCAAGAAAGGAGAGTGAGA+TGG + chr8_1:87370329-87370348 Msa1222970:CDS 50.0%
GAAAGGAGAGTGAGATGGAG+TGG + chr8_1:87370334-87370353 Msa1222970:CDS 50.0%
! CAGAAGTGTGGAGTCTCTGA+TGG - chr8_1:87370406-87370425 None:intergenic 50.0%
! ATAGCCCATGTAGTGGAGAC+TGG + chr8_1:87370722-87370741 Msa1222970:intron 50.0%
CTTCTCCAGTCTCCACTACA+TGG - chr8_1:87370730-87370749 None:intergenic 50.0%
! CATGTAGTGGAGACTGGAGA+AGG + chr8_1:87370728-87370747 Msa1222970:intron 50.0%
! CACACATTGCCGTTTGCATC+TGG + chr8_1:87371189-87371208 Msa1222970:intron 50.0%
TTGTGTGGCCCAGATGCAAA+CGG - chr8_1:87371201-87371220 None:intergenic 50.0%
GGGCCACACAAATGTACTCA+TGG - chr8_1:87371229-87371248 None:intergenic 50.0%
GCTGTAGGTCATGCTTGCAT+TGG + chr8_1:87371835-87371854 Msa1222970:intron 50.0%
TTGAGGAGGAACACTGGAGA+AGG + chr8_1:87372234-87372253 Msa1222970:CDS 50.0%
! GTCCTGTGTACTGATGACTC+AGG + chr8_1:87373069-87373088 Msa1222970:CDS 50.0%
CACCTGAGTCATCAGTACAC+AGG - chr8_1:87373074-87373093 None:intergenic 50.0%
GTATTCGTTGGAGAGACTGG+TGG - chr8_1:87373103-87373122 None:intergenic 50.0%
TGCGGATAACACGGCAAAAG+AGG + chr8_1:87373290-87373309 Msa1222970:CDS 50.0%
TAAGGGACGCAACTAACTGC+TGG + chr8_1:87373436-87373455 Msa1222970:three_prime_UTR 50.0%
! GGTCTTTTGCCGTGTTGCAT+GGG - chr8_1:87373775-87373794 None:intergenic 50.0%
! AGGTCTTTTGCCGTGTTGCA+TGG - chr8_1:87373776-87373795 None:intergenic 50.0%
CATTGACCGGAGGGAGACAA+CGG + chr8_1:87371722-87371741 Msa1222970:CDS 55.0%
GGAGACAACGGAAGCAGCAA+TGG + chr8_1:87371734-87371753 Msa1222970:CDS 55.0%
! GGAATCCAGCCGTTGGTGAA+TGG + chr8_1:87371897-87371916 Msa1222970:CDS 55.0%
TGACGTACATGGGGATGGTG+TGG + chr8_1:87373366-87373385 Msa1222970:three_prime_UTR 55.0%
TCCTAGCCCCCTATCTCAAG+CGG - chr8_1:87373724-87373743 None:intergenic 55.0%
CTGCTTCCGTTGTCTCCCTC+CGG - chr8_1:87371731-87371750 None:intergenic 60.0%
CAACGGCTGGATTCCCAGAG+AGG - chr8_1:87371892-87371911 None:intergenic 60.0%
! CTCTCTGGGAATCCAGCCGT+TGG + chr8_1:87371890-87371909 Msa1222970:CDS 60.0%
ACCGCTTGAGATAGGGGGCT+AGG + chr8_1:87373720-87373739 Msa1222970:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 87370166 87373894 87370166 ID=Msa1222970;Name=Msa1222970
chr8_1 mRNA 87370166 87373894 87370166 ID=Msa1222970-mRNA-1;Parent=Msa1222970;Name=Msa1222970-mRNA-1;_AED=0.16;_eAED=0.16;_QI=146|1|1|1|1|1|11|535|379
chr8_1 exon 87370166 87370424 87370166 ID=Msa1222970-mRNA-1:exon:31496;Parent=Msa1222970-mRNA-1
chr8_1 exon 87370505 87370575 87370505 ID=Msa1222970-mRNA-1:exon:31497;Parent=Msa1222970-mRNA-1
chr8_1 exon 87371036 87371127 87371036 ID=Msa1222970-mRNA-1:exon:31498;Parent=Msa1222970-mRNA-1
chr8_1 exon 87371372 87371431 87371372 ID=Msa1222970-mRNA-1:exon:31499;Parent=Msa1222970-mRNA-1
chr8_1 exon 87371516 87371761 87371516 ID=Msa1222970-mRNA-1:exon:31500;Parent=Msa1222970-mRNA-1
chr8_1 exon 87371842 87371918 87371842 ID=Msa1222970-mRNA-1:exon:31501;Parent=Msa1222970-mRNA-1
chr8_1 exon 87372012 87372081 87372012 ID=Msa1222970-mRNA-1:exon:31502;Parent=Msa1222970-mRNA-1
chr8_1 exon 87372164 87372277 87372164 ID=Msa1222970-mRNA-1:exon:31503;Parent=Msa1222970-mRNA-1
chr8_1 exon 87372602 87372668 87372602 ID=Msa1222970-mRNA-1:exon:31504;Parent=Msa1222970-mRNA-1
chr8_1 exon 87373040 87373144 87373040 ID=Msa1222970-mRNA-1:exon:31505;Parent=Msa1222970-mRNA-1
chr8_1 exon 87373235 87373894 87373235 ID=Msa1222970-mRNA-1:exon:31506;Parent=Msa1222970-mRNA-1
chr8_1 five_prime_UTR 87370166 87370311 87370166 ID=Msa1222970-mRNA-1:five_prime_utr;Parent=Msa1222970-mRNA-1
chr8_1 CDS 87370312 87370424 87370312 ID=Msa1222970-mRNA-1:cds;Parent=Msa1222970-mRNA-1
chr8_1 CDS 87370505 87370575 87370505 ID=Msa1222970-mRNA-1:cds;Parent=Msa1222970-mRNA-1
chr8_1 CDS 87371036 87371127 87371036 ID=Msa1222970-mRNA-1:cds;Parent=Msa1222970-mRNA-1
chr8_1 CDS 87371372 87371431 87371372 ID=Msa1222970-mRNA-1:cds;Parent=Msa1222970-mRNA-1
chr8_1 CDS 87371516 87371761 87371516 ID=Msa1222970-mRNA-1:cds;Parent=Msa1222970-mRNA-1
chr8_1 CDS 87371842 87371918 87371842 ID=Msa1222970-mRNA-1:cds;Parent=Msa1222970-mRNA-1
chr8_1 CDS 87372012 87372081 87372012 ID=Msa1222970-mRNA-1:cds;Parent=Msa1222970-mRNA-1
chr8_1 CDS 87372164 87372277 87372164 ID=Msa1222970-mRNA-1:cds;Parent=Msa1222970-mRNA-1
chr8_1 CDS 87372602 87372668 87372602 ID=Msa1222970-mRNA-1:cds;Parent=Msa1222970-mRNA-1
chr8_1 CDS 87373040 87373144 87373040 ID=Msa1222970-mRNA-1:cds;Parent=Msa1222970-mRNA-1
chr8_1 CDS 87373235 87373359 87373235 ID=Msa1222970-mRNA-1:cds;Parent=Msa1222970-mRNA-1
chr8_1 three_prime_UTR 87373360 87373894 87373360 ID=Msa1222970-mRNA-1:three_prime_utr;Parent=Msa1222970-mRNA-1
Gene Sequence

>Msa1222970

ATGACCAAGATACAAGACGCAAGAAAGGAGAGTGAGATGGAGTGGTGTATGTCAATTCCAAAGGTAGAATTGCATGCTCACCTCAATGGATCCATCAGAGACTCCACACTTCTCGAACTTGCTAAAGGTTTGGGTGATAAGGGTCTCATTGATTTCTCCCAAGTCCAGCATGTTATCCTCAAAAACGATCGTTCATTATCTGAGGTATTCAAGCTGTTTGACGTAATCCACATTCTTACAACTGATCATGCGACGGTTACAAGAATTACAAAAGAAGTTGTTGAAGATTTTGCGTCAGAGAATGTTGTATATGTGGAGTTGAGAACTACTCCAAAGAAAAATGAATCCAAAGGAATGAGCAAACGCTCTTATATTGAAGCTGTACTTGAAGGTCTAAGATCTGTCAGTTCGGTTGATCTGGGTTTTATTCCTTTCAGCGAAGAGATTAAAAACCATTCAAACCCTATACTCTCAGTCTCAGCTACAGATGATAGAAGTAATGAAAATACTAGGAAAAAAATCTTTGTTAGGCTTCTCTTAAGCATTGACCGGAGGGAGACAACGGAAGCAGCAATGGAAACTGTCATGCTTGCATTGGAAATGAGGCATTTTGGGGTTGTTGGAATTGACCTCTCTGGGAATCCAGCCGTTGGTGAATGGGTTACATATTTGCCAGCACTAAAATTTGCTCGAGAACAGGGTCTTTATGTAACTCTTCACTGTGGAGAGGTGCCTAACTTGAGGGAGATACATGATATGCTTGACTTTCTTCCTGAAAGGATTGGACATGCATGTTTCTTTGAGGAGGAACACTGGAGAAGGCTGAAATCGTCTAAAATTCCGGTTGAACTTTGTTTGACATCAAACATTAGGACATTGTCCGTTCCATCAATTGATGCTCATCATTTTGTGGATTTGTATAATGCAAAACATCCTGTAGTCCTGTGTACTGATGACTCAGGTGTGTTCTCCACCAGTCTCTCCAACGAATACAAAATTGCTGCTTCTTCATTTGGCCTTGGAAGGAAGGAGATGTTTGAGCTATCAAAGAATGCTGTTGAATTTATATTTGCGGATAACACGGCAAAAGAGGATTTAAGAAATATTTTTAGTTTAGCAGCAAATGATCTGGAGCTCTAG

Protein sequence

>Msa1222970

MTKIQDARKESEMEWCMSIPKVELHAHLNGSIRDSTLLELAKGLGDKGLIDFSQVQHVILKNDRSLSEVFKLFDVIHILTTDHATVTRITKEVVEDFASENVVYVELRTTPKKNESKGMSKRSYIEAVLEGLRSVSSVDLGFIPFSEEIKNHSNPILSVSATDDRSNENTRKKIFVRLLLSIDRRETTEAAMETVMLALEMRHFGVVGIDLSGNPAVGEWVTYLPALKFAREQGLYVTLHCGEVPNLREIHDMLDFLPERIGHACFFEEEHWRRLKSSKIPVELCLTSNIRTLSVPSIDAHHFVDLYNAKHPVVLCTDDSGVFSTSLSNEYKIAASSFGLGRKEMFELSKNAVEFIFADNTAKEDLRNIFSLAANDLEL*