Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1370910 | XP_039686012.1 | 89.197 | 361 | 13 | 8 | 1 | 357 | 1 | 339 | 2.49e-176 | 503 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1370910 | sp|Q8H102|BH128_ARATH | 42.400 | 375 | 133 | 13 | 27 | 355 | 22 | 359 | 1.36e-67 | 219 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1370910 | G7IB14 | 88.981 | 363 | 14 | 8 | 1 | 357 | 1 | 343 | 2.37e-176 | 502 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1370910 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008850 | Msa1370910 | -0.812855 | 3.436446e-51 | -8.615850e-47 |
| Msa0038310 | Msa1370910 | -0.804316 | 2.290396e-49 | -8.615850e-47 |
| Msa0053480 | Msa1370910 | -0.800506 | 1.396086e-48 | -8.615850e-47 |
| Msa0103060 | Msa1370910 | -0.809917 | 1.492568e-50 | -8.615850e-47 |
| Msa0105340 | Msa1370910 | -0.810008 | 1.426747e-50 | -8.615850e-47 |
| Msa1353280 | Msa1370910 | -0.809454 | 1.877597e-50 | -8.615850e-47 |
| Msa1355260 | Msa1370910 | -0.820723 | 5.900560e-53 | -8.615850e-47 |
| Msa1370630 | Msa1370910 | -0.816044 | 6.774465e-52 | -8.615850e-47 |
| Msa1370910 | Msa1387090 | -0.810443 | 1.149561e-50 | -8.615850e-47 |
| Msa1370910 | Msa1396570 | 0.863311 | 2.725161e-64 | -8.615850e-47 |
| Msa1370910 | Msa1428440 | -0.839432 | 1.590419e-57 | -8.615850e-47 |
| Msa1370910 | Msa1431000 | -0.800766 | 1.235581e-48 | -8.615850e-47 |
| Msa1370910 | Msa1447560 | -0.807052 | 6.100613e-50 | -8.615850e-47 |
| Msa0616910 | Msa1370910 | -0.819846 | 9.371388e-53 | -8.615850e-47 |
| Msa0621890 | Msa1370910 | -0.804059 | 2.590913e-49 | -8.615850e-47 |
| Msa0626230 | Msa1370910 | -0.824361 | 8.414476e-54 | -8.615850e-47 |
| Msa0653710 | Msa1370910 | -0.805174 | 1.516467e-49 | -8.615850e-47 |
| Msa0664130 | Msa1370910 | -0.807884 | 4.064673e-50 | -8.615850e-47 |
| Msa0697140 | Msa1370910 | -0.803932 | 2.753366e-49 | -8.615850e-47 |
| Msa0722930 | Msa1370910 | -0.819069 | 1.409403e-52 | -8.615850e-47 |
| Msa0723140 | Msa1370910 | -0.824185 | 9.256931e-54 | -8.615850e-47 |
| Msa0724050 | Msa1370910 | -0.813624 | 2.329130e-51 | -8.615850e-47 |
| Msa0739610 | Msa1370910 | -0.801566 | 8.474563e-49 | -8.615850e-47 |
| Msa0763880 | Msa1370910 | -0.809013 | 2.333286e-50 | -8.615850e-47 |
| Msa0778580 | Msa1370910 | -0.816352 | 5.781044e-52 | -8.615850e-47 |
| Msa0782330 | Msa1370910 | -0.800280 | 1.551970e-48 | -8.615850e-47 |
| Msa0796460 | Msa1370910 | -0.838581 | 2.642106e-57 | -8.615850e-47 |
| Msa0807050 | Msa1370910 | -0.814647 | 1.385008e-51 | -8.615850e-47 |
| Msa0815950 | Msa1370910 | -0.828650 | 7.991442e-55 | -8.615850e-47 |
| Msa0828570 | Msa1370910 | -0.800807 | 1.212039e-48 | -8.615850e-47 |
| Msa0832990 | Msa1370910 | -0.817451 | 3.276224e-52 | -8.615850e-47 |
| Msa0164360 | Msa1370910 | -0.815725 | 7.979220e-52 | -8.615850e-47 |
| Msa0205400 | Msa1370910 | -0.809535 | 1.803701e-50 | -8.615850e-47 |
| Msa1256280 | Msa1370910 | -0.838359 | 3.014212e-57 | -8.615850e-47 |
| Msa1264140 | Msa1370910 | -0.802120 | 6.521508e-49 | -8.615850e-47 |
| Msa1287160 | Msa1370910 | -0.811533 | 6.675615e-51 | -8.615850e-47 |
| Msa1327820 | Msa1370910 | -0.812760 | 3.605224e-51 | -8.615850e-47 |
| Msa1329990 | Msa1370910 | -0.800131 | 1.663994e-48 | -8.615850e-47 |
| Msa1335970 | Msa1370910 | 0.809132 | 2.200968e-50 | -8.615850e-47 |
| Msa0371420 | Msa1370910 | 0.836957 | 6.900158e-57 | -8.615850e-47 |
| Msa0411000 | Msa1370910 | -0.830059 | 3.635343e-55 | -8.615850e-47 |
| Msa0418000 | Msa1370910 | -0.822349 | 2.484002e-53 | -8.615850e-47 |
| Msa0419620 | Msa1370910 | 0.851679 | 7.585779e-61 | -8.615850e-47 |
| Msa0427050 | Msa1370910 | -0.815025 | 1.142080e-51 | -8.615850e-47 |
| Msa0429070 | Msa1370910 | 0.830113 | 3.525535e-55 | -8.615850e-47 |
| Msa0448400 | Msa1370910 | -0.812646 | 3.818617e-51 | -8.615850e-47 |
| Msa0455230 | Msa1370910 | -0.820556 | 6.443626e-53 | -8.615850e-47 |
| Msa0465680 | Msa1370910 | 0.836426 | 9.426371e-57 | -8.615850e-47 |
| Msa0985290 | Msa1370910 | 0.801875 | 7.325057e-49 | -8.615850e-47 |
| Msa0988500 | Msa1370910 | -0.803026 | 4.241667e-49 | -8.615850e-47 |
| Msa1000020 | Msa1370910 | -0.805413 | 1.351319e-49 | -8.615850e-47 |
| Msa1032350 | Msa1370910 | -0.811606 | 6.435065e-51 | -8.615850e-47 |
| Msa1036350 | Msa1370910 | -0.804280 | 2.330559e-49 | -8.615850e-47 |
| Msa1043870 | Msa1370910 | -0.810107 | 1.358608e-50 | -8.615850e-47 |
| Msa1044450 | Msa1370910 | -0.820946 | 5.243697e-53 | -8.615850e-47 |
| Msa1063490 | Msa1370910 | -0.801989 | 6.940162e-49 | -8.615850e-47 |
| Msa1076630 | Msa1370910 | -0.814657 | 1.378161e-51 | -8.615850e-47 |
| Msa1079610 | Msa1370910 | -0.813387 | 2.626815e-51 | -8.615850e-47 |
| Msa1080790 | Msa1370910 | -0.837937 | 3.870754e-57 | -8.615850e-47 |
| Msa1102180 | Msa1370910 | -0.807046 | 6.118605e-50 | -8.615850e-47 |
| Msa0248600 | Msa1370910 | -0.812915 | 3.334084e-51 | -8.615850e-47 |
| Msa0252180 | Msa1370910 | -0.809507 | 1.828792e-50 | -8.615850e-47 |
| Msa0286860 | Msa1370910 | -0.859893 | 3.017529e-63 | -8.615850e-47 |
| Msa0286880 | Msa1370910 | -0.872596 | 2.816243e-67 | -8.615850e-47 |
| Msa0303200 | Msa1370910 | -0.812776 | 3.575769e-51 | -8.615850e-47 |
| Msa0306130 | Msa1370910 | -0.805006 | 1.643642e-49 | -8.615850e-47 |
| Msa0325510 | Msa1370910 | -0.841955 | 3.470610e-58 | -8.615850e-47 |
| Msa0336270 | Msa1370910 | -0.819869 | 9.260795e-53 | -8.615850e-47 |
| Msa0363460 | Msa1370910 | -0.819854 | 9.330306e-53 | -8.615850e-47 |
| Msa1108780 | Msa1370910 | -0.836601 | 8.505839e-57 | -8.615850e-47 |
| Msa1118930 | Msa1370910 | -0.836305 | 1.011808e-56 | -8.615850e-47 |
| Msa1132950 | Msa1370910 | -0.812573 | 3.961713e-51 | -8.615850e-47 |
| Msa1133660 | Msa1370910 | -0.801697 | 7.967592e-49 | -8.615850e-47 |
| Msa1152280 | Msa1370910 | -0.812891 | 3.373956e-51 | -8.615850e-47 |
| Msa1208070 | Msa1370910 | -0.848785 | 4.913385e-60 | -8.615850e-47 |
| Msa1221570 | Msa1370910 | 0.823860 | 1.103351e-53 | -8.615850e-47 |
| Msa1223460 | Msa1370910 | -0.800525 | 1.383762e-48 | -8.615850e-47 |
| Msa0496460 | Msa1370910 | -0.819682 | 1.021499e-52 | -8.615850e-47 |
| Msa0498920 | Msa1370910 | -0.813712 | 2.227432e-51 | -8.615850e-47 |
| Msa0511720 | Msa1370910 | 0.829250 | 5.716835e-55 | -8.615850e-47 |
| Msa0576400 | Msa1370910 | 0.804466 | 2.131805e-49 | -8.615850e-47 |
| Msa0576990 | Msa1370910 | 0.801978 | 6.976021e-49 | -8.615850e-47 |
| Msa0585930 | Msa1370910 | -0.806214 | 9.171857e-50 | -8.615850e-47 |
| Msa0843280 | Msa1370910 | -0.811071 | 8.409010e-51 | -8.615850e-47 |
| Msa0860270 | Msa1370910 | -0.807875 | 4.081627e-50 | -8.615850e-47 |
| Msa0887070 | Msa1370910 | -0.801054 | 1.079042e-48 | -8.615850e-47 |
| Msa0900200 | Msa1370910 | -0.809480 | 1.853211e-50 | -8.615850e-47 |
| Msa0903730 | Msa1370910 | -0.811120 | 8.206084e-51 | -8.615850e-47 |
| Msa0910570 | Msa1370910 | 0.804080 | 2.565008e-49 | -8.615850e-47 |
| Msa0922340 | Msa1370910 | -0.805324 | 1.410401e-49 | -8.615850e-47 |
| Msa0926800 | Msa1370910 | -0.800669 | 1.293026e-48 | -8.615850e-47 |
| Msa0964680 | Msa1370910 | -0.800234 | 1.586015e-48 | -8.615850e-47 |
| Msa0965520 | Msa1370910 | -0.815180 | 1.055118e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1370910 | MtrunA17_Chr1g0213791 | 88.981 | 363 | 14 | 8 | 1 | 357 | 1 | 343 | 4.57e-180 | 502 |
| Msa1370910 | MtrunA17_Chr1g0174271 | 40.076 | 262 | 128 | 8 | 102 | 351 | 126 | 370 | 3.17e-38 | 140 |
| Msa1370910 | MtrunA17_Chr4g0032951 | 62.617 | 107 | 39 | 1 | 250 | 355 | 325 | 431 | 1.33e-37 | 140 |
| Msa1370910 | MtrunA17_Chr2g0329041 | 60.526 | 114 | 39 | 3 | 245 | 355 | 297 | 407 | 1.39e-34 | 131 |
| Msa1370910 | MtrunA17_Chr4g0014771 | 58.947 | 95 | 39 | 0 | 261 | 355 | 100 | 194 | 9.42e-34 | 123 |
| Msa1370910 | MtrunA17_Chr3g0087771 | 30.569 | 422 | 176 | 13 | 6 | 352 | 16 | 395 | 2.94e-31 | 122 |
| Msa1370910 | MtrunA17_Chr7g0258181 | 50.000 | 124 | 57 | 3 | 235 | 355 | 198 | 319 | 1.56e-29 | 115 |
| Msa1370910 | MtrunA17_Chr4g0074161 | 53.846 | 65 | 29 | 1 | 278 | 342 | 205 | 268 | 6.53e-14 | 72.4 |
| Msa1370910 | MtrunA17_Chr1g0190731 | 50.769 | 65 | 31 | 1 | 278 | 342 | 192 | 255 | 3.65e-12 | 67.0 |
| Msa1370910 | MtrunA17_Chr3g0131771 | 50.000 | 64 | 32 | 0 | 279 | 342 | 147 | 210 | 7.75e-12 | 65.5 |
| Msa1370910 | MtrunA17_Chr8g0339091 | 47.059 | 68 | 36 | 0 | 279 | 346 | 291 | 358 | 1.42e-11 | 65.5 |
| Msa1370910 | MtrunA17_Chr1g0152651 | 50.000 | 68 | 33 | 1 | 278 | 345 | 273 | 339 | 2.12e-11 | 64.7 |
| Msa1370910 | MtrunA17_Chr3g0144641 | 47.059 | 68 | 36 | 0 | 279 | 346 | 191 | 258 | 2.13e-11 | 64.7 |
| Msa1370910 | MtrunA17_Chr8g0363921 | 46.377 | 69 | 37 | 0 | 279 | 347 | 151 | 219 | 2.69e-11 | 63.5 |
| Msa1370910 | MtrunA17_Chr5g0393721 | 50.000 | 68 | 33 | 1 | 278 | 345 | 223 | 289 | 2.72e-11 | 63.9 |
| Msa1370910 | MtrunA17_Chr8g0365941 | 47.059 | 68 | 36 | 0 | 279 | 346 | 305 | 372 | 3.34e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1370910 | AT1G05805.1 | 42.400 | 375 | 133 | 13 | 27 | 355 | 22 | 359 | 1.38e-68 | 219 |
| Msa1370910 | AT2G43140.2 | 48.188 | 276 | 96 | 10 | 94 | 355 | 66 | 308 | 3.39e-60 | 196 |
| Msa1370910 | AT2G43140.1 | 52.727 | 220 | 63 | 8 | 144 | 355 | 25 | 211 | 1.40e-56 | 184 |
| Msa1370910 | AT1G51140.1 | 61.765 | 102 | 35 | 1 | 250 | 351 | 279 | 376 | 3.84e-36 | 135 |
| Msa1370910 | AT1G35460.1 | 61.290 | 93 | 36 | 0 | 263 | 355 | 165 | 257 | 8.68e-36 | 131 |
| Msa1370910 | AT2G42280.1 | 71.429 | 84 | 24 | 0 | 272 | 355 | 272 | 355 | 1.30e-34 | 130 |
| Msa1370910 | AT4G09180.1 | 60.870 | 92 | 36 | 0 | 264 | 355 | 169 | 260 | 1.41e-33 | 125 |
| Msa1370910 | AT2G42280.3 | 79.710 | 69 | 14 | 0 | 272 | 340 | 272 | 340 | 5.94e-31 | 120 |
| Msa1370910 | AT1G35460.2 | 69.492 | 59 | 18 | 0 | 263 | 321 | 165 | 223 | 2.95e-23 | 97.1 |
| Msa1370910 | AT2G24260.2 | 55.385 | 65 | 28 | 1 | 278 | 342 | 34 | 97 | 8.46e-14 | 70.9 |
| Msa1370910 | AT2G24260.1 | 55.385 | 65 | 28 | 1 | 278 | 342 | 137 | 200 | 1.45e-13 | 71.2 |
| Msa1370910 | AT5G58010.1 | 50.769 | 65 | 31 | 1 | 278 | 342 | 98 | 161 | 2.48e-13 | 70.1 |
| Msa1370910 | AT4G30980.1 | 53.846 | 65 | 29 | 1 | 278 | 342 | 129 | 192 | 2.68e-13 | 70.1 |
| Msa1370910 | AT4G30980.2 | 53.846 | 65 | 29 | 1 | 278 | 342 | 177 | 240 | 3.83e-13 | 70.1 |
| Msa1370910 | AT1G25330.1 | 45.833 | 72 | 37 | 1 | 271 | 342 | 98 | 167 | 2.40e-12 | 66.2 |
| Msa1370910 | AT4G34530.1 | 50.000 | 64 | 32 | 0 | 279 | 342 | 172 | 235 | 4.52e-12 | 67.0 |
| Msa1370910 | AT5G50915.1 | 44.737 | 76 | 40 | 1 | 271 | 346 | 130 | 203 | 7.24e-12 | 65.9 |
| Msa1370910 | AT5G50915.2 | 44.737 | 76 | 40 | 1 | 271 | 346 | 130 | 203 | 7.24e-12 | 65.9 |
| Msa1370910 | AT5G50915.3 | 44.737 | 76 | 40 | 1 | 271 | 346 | 130 | 203 | 8.94e-12 | 65.1 |
| Msa1370910 | AT5G50915.4 | 44.737 | 76 | 40 | 1 | 271 | 346 | 130 | 203 | 8.94e-12 | 65.1 |
| Msa1370910 | AT1G68920.3 | 44.737 | 76 | 41 | 1 | 271 | 346 | 295 | 369 | 1.19e-11 | 66.2 |
| Msa1370910 | AT1G68920.1 | 44.737 | 76 | 41 | 1 | 271 | 346 | 296 | 370 | 1.23e-11 | 66.2 |
| Msa1370910 | AT1G68920.4 | 44.737 | 76 | 41 | 1 | 271 | 346 | 296 | 370 | 1.23e-11 | 66.2 |
| Msa1370910 | AT1G68920.2 | 44.737 | 76 | 41 | 1 | 271 | 346 | 296 | 370 | 1.23e-11 | 66.2 |
| Msa1370910 | AT1G26260.5 | 45.333 | 75 | 38 | 1 | 271 | 342 | 190 | 264 | 1.53e-11 | 65.5 |
| Msa1370910 | AT1G26260.4 | 45.333 | 75 | 38 | 1 | 271 | 342 | 212 | 286 | 1.66e-11 | 65.5 |
| Msa1370910 | AT1G26260.1 | 45.333 | 75 | 38 | 1 | 271 | 342 | 212 | 286 | 1.66e-11 | 65.5 |
| Msa1370910 | AT1G26260.6 | 45.333 | 75 | 38 | 1 | 271 | 342 | 212 | 286 | 1.66e-11 | 65.5 |
| Msa1370910 | AT1G26260.2 | 45.333 | 75 | 38 | 1 | 271 | 342 | 212 | 286 | 1.66e-11 | 65.5 |
| Msa1370910 | AT1G26260.3 | 45.333 | 75 | 38 | 1 | 271 | 342 | 161 | 235 | 2.08e-11 | 64.7 |
| Msa1370910 | AT3G07340.2 | 47.059 | 68 | 36 | 0 | 279 | 346 | 258 | 325 | 4.50e-11 | 64.3 |
| Msa1370910 | AT3G07340.1 | 47.059 | 68 | 36 | 0 | 279 | 346 | 258 | 325 | 5.51e-11 | 63.9 |
| Msa1370910 | AT4G36540.1 | 48.438 | 64 | 33 | 0 | 279 | 342 | 141 | 204 | 5.81e-11 | 63.2 |
| Msa1370910 | AT4G36540.2 | 48.438 | 64 | 33 | 0 | 279 | 342 | 141 | 204 | 6.17e-11 | 63.2 |
| Msa1370910 | AT5G48560.1 | 41.772 | 79 | 44 | 1 | 271 | 349 | 295 | 371 | 6.19e-11 | 63.9 |
| Msa1370910 | AT5G48560.2 | 41.772 | 79 | 44 | 1 | 271 | 349 | 295 | 371 | 6.32e-11 | 63.9 |
Find 95 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATGTTGTTATTATTATC+AGG | 0.237463 | tig0019144:-6878 | None:intergenic |
| CAATGAATAACTTATTCTTA+TGG | 0.261825 | tig0019144:+10673 | Msa1370910:three_prime_UTR |
| TTATGTGTTATGAGATTCTA+TGG | 0.265658 | tig0019144:+10426 | Msa1370910:three_prime_UTR |
| TTATTCAGACATGCTGGATT+TGG | 0.325679 | tig0019144:+10093 | Msa1370910:CDS |
| GGAGGATCACGCCTTCTTCC+TGG | 0.332014 | tig0019144:+6355 | Msa1370910:CDS |
| CCCAGGTATTGGTACTAGTA+TGG | 0.340957 | tig0019144:-6847 | None:intergenic |
| TTTACAAGGGACGGAATCTT+GGG | 0.341870 | tig0019144:-7211 | None:intergenic |
| TCCTCGTAGCATTGCTGAAC+GGG | 0.362115 | tig0019144:+7263 | Msa1370910:CDS |
| GGTCAAGCTGGTGGCTTTGA+TGG | 0.364612 | tig0019144:+6490 | Msa1370910:CDS |
| TGATCCTCCTACTCCTATTA+TGG | 0.392279 | tig0019144:-6341 | None:intergenic |
| AATTATACCTTATCCATGTT+AGG | 0.394411 | tig0019144:-7447 | None:intergenic |
| ACCACTGTGGATGCCATAAT+AGG | 0.397171 | tig0019144:+6328 | Msa1370910:CDS |
| AAGTCTGAATTGAGCTTCAC+TGG | 0.397670 | tig0019144:+6746 | Msa1370910:CDS |
| GCATCAGCAGCAGCTGGAAA+TGG | 0.408966 | tig0019144:+6818 | Msa1370910:CDS |
| AAATAATGTTGTCCCGTTCC+AGG | 0.410987 | tig0019144:-6373 | None:intergenic |
| AACGGGACTAGTTAGAAATC+TGG | 0.423807 | tig0019144:+10717 | Msa1370910:three_prime_UTR |
| TTGAGAAGAAGAAAATACTA+TGG | 0.436830 | tig0019144:-6909 | None:intergenic |
| TAGTCTCCCACAAACTTCTC+TGG | 0.449517 | tig0019144:+7161 | Msa1370910:CDS |
| TTCAGACATGCTGGATTTGG+CGG | 0.454145 | tig0019144:+10096 | Msa1370910:CDS |
| TCACGCCTTCTTCCTGGAAC+GGG | 0.457043 | tig0019144:+6361 | Msa1370910:CDS |
| AGGGCCTCCACCCCAGGTAT+TGG | 0.457132 | tig0019144:-6858 | None:intergenic |
| GTATCGTCCACCTTCCTCAT+CGG | 0.462261 | tig0019144:+6210 | Msa1370910:CDS |
| TGGCAAGTTGAAGAAGTTGC+AGG | 0.465868 | tig0019144:+7416 | Msa1370910:CDS |
| GAGAGAAGAACTAGAATAAG+TGG | 0.469542 | tig0019144:+7396 | Msa1370910:CDS |
| AGGTCTTCAAACTCAAGTTC+AGG | 0.476074 | tig0019144:+10132 | Msa1370910:CDS |
| ACAGAGCTCCATCAGTCAAA+CGG | 0.480020 | tig0019144:+6264 | Msa1370910:CDS |
| TATCGTCCACCTTCCTCATC+GGG | 0.481788 | tig0019144:+6211 | Msa1370910:CDS |
| ATTATCAGGGCCTCCACCCC+AGG | 0.482955 | tig0019144:-6864 | None:intergenic |
| TATGATTGAGAGTGGCTAGA+TGG | 0.483070 | tig0019144:-6558 | None:intergenic |
| CAGAGCTCCATCAGTCAAAC+GGG | 0.487084 | tig0019144:+6265 | Msa1370910:CDS |
| ATGAGTGGCGCATCCACGCT+TGG | 0.498051 | tig0019144:-7241 | None:intergenic |
| AAGAAGGTCGGGATCATCAT+TGG | 0.499212 | tig0019144:-7014 | None:intergenic |
| AACAAGTTATTCAGACATGC+TGG | 0.500068 | tig0019144:+10087 | Msa1370910:CDS |
| TGTACTTTGTTTGCATCCGC+AGG | 0.501831 | tig0019144:-10395 | None:intergenic |
| CATAATAACAATAACAATAA+CGG | 0.502093 | tig0019144:+6586 | Msa1370910:CDS |
| CCCACAAACTTCTCTGGAGA+TGG | 0.503550 | tig0019144:+7167 | Msa1370910:CDS |
| CCTTGTACCTAACATGGATA+AGG | 0.512854 | tig0019144:+7440 | Msa1370910:CDS |
| CCTTATCCATGTTAGGTACA+AGG | 0.519581 | tig0019144:-7440 | None:intergenic |
| CAAACGGGTCTCACAAGGTA+TGG | 0.525076 | tig0019144:+6280 | Msa1370910:CDS |
| AGTCTGAATTGAGCTTCACT+GGG | 0.526710 | tig0019144:+6747 | Msa1370910:CDS |
| AGGCAATGTAGAAGAAGGTC+GGG | 0.527337 | tig0019144:-7025 | None:intergenic |
| TCCATACTAGTACCAATACC+TGG | 0.528579 | tig0019144:+6846 | Msa1370910:CDS |
| GTGGTGTTGAGGAGAGAGCT+AGG | 0.530531 | tig0019144:-6310 | None:intergenic |
| GATTATGCATCAGCAGCAGC+TGG | 0.531366 | tig0019144:+6812 | Msa1370910:CDS |
| GGCTAGATGGTTGAGAAAGC+CGG | 0.532966 | tig0019144:-6545 | None:intergenic |
| TGATGTTGTTATTATTATCA+GGG | 0.533374 | tig0019144:-6877 | None:intergenic |
| GTTGTCCCGTTCCAGGAAGA+AGG | 0.539397 | tig0019144:-6366 | None:intergenic |
| CCATCTCCAGAGAAGTTTGT+GGG | 0.544047 | tig0019144:-7167 | None:intergenic |
| TGTAAAATCCGTGCCAAGCG+TGG | 0.544695 | tig0019144:+7228 | Msa1370910:CDS |
| GGGGAATATTATGCATAAGC+TGG | 0.546019 | tig0019144:-7191 | None:intergenic |
| TGGCGCATCCACGCTTGGCA+CGG | 0.548021 | tig0019144:-7236 | None:intergenic |
| CCTCAATGCCCTCGAAACTC+AGG | 0.548042 | tig0019144:+7045 | Msa1370910:CDS |
| ATAGTTGTATTTGAAAGTAG+AGG | 0.552797 | tig0019144:+10600 | Msa1370910:three_prime_UTR |
| ATCCTCGTAGCATTGCTGAA+CGG | 0.552987 | tig0019144:+7262 | Msa1370910:CDS |
| TGTGAGACCCGTTTGACTGA+TGG | 0.553828 | tig0019144:-6272 | None:intergenic |
| AGTACCAATACCTGGGGTGG+AGG | 0.556362 | tig0019144:+6854 | Msa1370910:CDS |
| TCCATCTCCAGAGAAGTTTG+TGG | 0.557386 | tig0019144:-7168 | None:intergenic |
| GAGATAGTACCTGAGTTTCG+AGG | 0.564156 | tig0019144:-7054 | None:intergenic |
| TCTTCTTACGAAGGTCAAGC+TGG | 0.565420 | tig0019144:+6478 | Msa1370910:CDS |
| ATCACGCCTTCTTCCTGGAA+CGG | 0.566174 | tig0019144:+6360 | Msa1370910:CDS |
| TGGCATCCACAGTGGTGTTG+AGG | 0.566500 | tig0019144:-6321 | None:intergenic |
| GGCACTGTGCATAGAAGTCA+AGG | 0.570057 | tig0019144:+10447 | Msa1370910:three_prime_UTR |
| CATTGAGGCAATGTAGAAGA+AGG | 0.573373 | tig0019144:-7030 | None:intergenic |
| CCTGAGTTTCGAGGGCATTG+AGG | 0.579102 | tig0019144:-7045 | None:intergenic |
| AGATGGTTGAGAAAGCCGGC+TGG | 0.579941 | tig0019144:-6541 | None:intergenic |
| GAGGCAATGTAGAAGAAGGT+CGG | 0.583589 | tig0019144:-7026 | None:intergenic |
| CTGTTGTTGCTGAGACGAAG+AGG | 0.588667 | tig0019144:-6245 | None:intergenic |
| TTGGCGGTTCAACATATCAA+AGG | 0.593157 | tig0019144:+10112 | Msa1370910:CDS |
| GTGGATGCCATAATAGGAGT+AGG | 0.597675 | tig0019144:+6334 | Msa1370910:CDS |
| CCATACTAGTACCAATACCT+GGG | 0.597961 | tig0019144:+6847 | Msa1370910:CDS |
| AGATAGTACCTGAGTTTCGA+GGG | 0.598370 | tig0019144:-7053 | None:intergenic |
| GACCTTGAGAATTGCACCTG+CGG | 0.607185 | tig0019144:+10379 | Msa1370910:CDS |
| CGTCAGAAAAGCTCTCCAGC+CGG | 0.607974 | tig0019144:+6526 | Msa1370910:CDS |
| AGCAATGCTACGAGGATGAG+TGG | 0.612328 | tig0019144:-7256 | None:intergenic |
| ATGATGATTATGATTGAGAG+TGG | 0.612751 | tig0019144:-6566 | None:intergenic |
| ATCCGCAGGTGCAATTCTCA+AGG | 0.615432 | tig0019144:-10381 | None:intergenic |
| GAAGAAGAACCCGATGAGGA+AGG | 0.617996 | tig0019144:-6220 | None:intergenic |
| GAAGAACCCGATGAGGAAGG+TGG | 0.619178 | tig0019144:-6217 | None:intergenic |
| TTCTAGACTACGTCTACCAC+AGG | 0.619562 | tig0019144:-10553 | None:intergenic |
| TTGATTGAATTGCAGCTGGG+GGG | 0.621095 | tig0019144:+6693 | Msa1370910:intron |
| GATGCCATAATAGGAGTAGG+AGG | 0.622651 | tig0019144:+6337 | Msa1370910:CDS |
| TCAGTCAAACGGGTCTCACA+AGG | 0.625307 | tig0019144:+6275 | Msa1370910:CDS |
| ACTAGTACCAATACCTGGGG+TGG | 0.626810 | tig0019144:+6851 | Msa1370910:CDS |
| TTACAAGGGACGGAATCTTG+GGG | 0.638798 | tig0019144:-7210 | None:intergenic |
| TCTTACGAAGGTCAAGCTGG+TGG | 0.649831 | tig0019144:+6481 | Msa1370910:CDS |
| TCCTATTATGGCATCCACAG+TGG | 0.651189 | tig0019144:-6329 | None:intergenic |
| GCAGGACCTTGTACCTAACA+TGG | 0.655399 | tig0019144:+7434 | Msa1370910:CDS |
| TCTGAATTGAGCTTCACTGG+GGG | 0.672020 | tig0019144:+6749 | Msa1370910:CDS |
| GGAAGAAGAAGAACCCGATG+AGG | 0.673921 | tig0019144:-6224 | None:intergenic |
| CAGCAGAGATCTTCTTACGA+AGG | 0.692275 | tig0019144:+6469 | Msa1370910:CDS |
| CTCTCTCCTCAACACCACTG+TGG | 0.695914 | tig0019144:+6315 | Msa1370910:CDS |
| GTCTGAATTGAGCTTCACTG+GGG | 0.703800 | tig0019144:+6748 | Msa1370910:CDS |
| ACCCGTTCAGCAATGCTACG+AGG | 0.708822 | tig0019144:-7264 | None:intergenic |
| CATACTAGTACCAATACCTG+GGG | 0.722107 | tig0019144:+6848 | Msa1370910:CDS |
| TGTATGTTGTAATCTACCTG+TGG | 0.747002 | tig0019144:+10537 | Msa1370910:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGAATTATTTATGTATTTA+AGG | - | tig0019144:8702-8721 | None:intergenic | 10.0% |
| !! | AAAATTAATATTTCATTGAT+AGG | + | tig0019144:10252-10271 | Msa1370910:intron | 10.0% |
| !! | CATAATAACAATAACAATAA+CGG | + | tig0019144:6586-6605 | Msa1370910:CDS | 15.0% |
| !! | TAACTAAAAATGAAATAATG+TGG | - | tig0019144:7110-7129 | None:intergenic | 15.0% |
| !! | AAATGAATTAATAATAGGTA+AGG | - | tig0019144:7505-7524 | None:intergenic | 15.0% |
| !! | CTATATAATGATGATAAATT+AGG | - | tig0019144:7544-7563 | None:intergenic | 15.0% |
| !! | CTAATTTATCATCATTATAT+AGG | + | tig0019144:7542-7561 | Msa1370910:intron | 15.0% |
| !! | TCTATTAGAAACTTAATTAA+GGG | - | tig0019144:7760-7779 | None:intergenic | 15.0% |
| !!! | TTCGTTTTTTTATAAAACTA+TGG | + | tig0019144:8114-8133 | Msa1370910:intron | 15.0% |
| !!! | CTTTTAGATATATACTTTTA+TGG | - | tig0019144:8380-8399 | None:intergenic | 15.0% |
| !!! | TTTATGTATGATAGTTTTTA+GGG | - | tig0019144:8619-8638 | None:intergenic | 15.0% |
| !!! | ATTTATGTATGATAGTTTTT+AGG | - | tig0019144:8620-8639 | None:intergenic | 15.0% |
| !!! | TCTTACTTTGAAAAATAAAA+AGG | - | tig0019144:9800-9819 | None:intergenic | 15.0% |
| !!! | ATATTTTCTACAATAAGTAT+TGG | + | tig0019144:9946-9965 | Msa1370910:intron | 15.0% |
| !!! | TGATGTTGTTATTATTATCA+GGG | - | tig0019144:6880-6899 | None:intergenic | 20.0% |
| !!! | TTGATGTTGTTATTATTATC+AGG | - | tig0019144:6881-6900 | None:intergenic | 20.0% |
| !! | CTAGCAAATGAATTAATAAT+AGG | - | tig0019144:7510-7529 | None:intergenic | 20.0% |
| !! | GTCTATTAGAAACTTAATTA+AGG | - | tig0019144:7761-7780 | None:intergenic | 20.0% |
| !! | AAAATAAGATAAAGGAAAAG+GGG | - | tig0019144:8023-8042 | None:intergenic | 20.0% |
| !! | CAAAATAAGATAAAGGAAAA+GGG | - | tig0019144:8024-8043 | None:intergenic | 20.0% |
| !!! | CTTTTCCTTTATCTTATTTT+GGG | + | tig0019144:8023-8042 | Msa1370910:intron | 20.0% |
| !!! | TTTTCCTTTATCTTATTTTG+GGG | + | tig0019144:8024-8043 | Msa1370910:intron | 20.0% |
| !! | AGCTATTACGTATAATATAA+AGG | + | tig0019144:8304-8323 | Msa1370910:intron | 20.0% |
| !! | AGTATATATCTAAAAGAACA+AGG | + | tig0019144:8384-8403 | Msa1370910:intron | 20.0% |
| !! | TCTTTGTTAATGATAACTAA+CGG | + | tig0019144:8502-8521 | Msa1370910:intron | 20.0% |
| !!! | TTATGTATGATAGTTTTTAG+GGG | - | tig0019144:8618-8637 | None:intergenic | 20.0% |
| !!! | TACTTTGATTTGTTAATCAA+TGG | + | tig0019144:9321-9340 | Msa1370910:intron | 20.0% |
| !! | AGTTATGAACTAATTTAACT+TGG | - | tig0019144:9875-9894 | None:intergenic | 20.0% |
| !! | GTAGAAAATATTTGAATTAC+TGG | - | tig0019144:9937-9956 | None:intergenic | 20.0% |
| !!! | ATTCGTTATTCTTTTAAAGT+TGG | - | tig0019144:10501-10520 | None:intergenic | 20.0% |
| !!! | ACAACTATCAAATTTTGAAA+AGG | - | tig0019144:10588-10607 | None:intergenic | 20.0% |
| !! | CAATGAATAACTTATTCTTA+TGG | + | tig0019144:10673-10692 | Msa1370910:three_prime_UTR | 20.0% |
| ! | TAAGACAAAGTCAAAATCAA+TGG | + | tig0019144:6626-6645 | Msa1370910:intron | 25.0% |
| !! | TGCATAATCAACAACATTTT+CGG | - | tig0019144:6801-6820 | None:intergenic | 25.0% |
| ! | TTGAGAAGAAGAAAATACTA+TGG | - | tig0019144:6912-6931 | None:intergenic | 25.0% |
| ! | AAAATGAAATAATGTGGTTG+TGG | - | tig0019144:7104-7123 | None:intergenic | 25.0% |
| ! | AATTATACCTTATCCATGTT+AGG | - | tig0019144:7450-7469 | None:intergenic | 25.0% |
| ! | AATAATAGGTAAGGAAAGTT+AGG | - | tig0019144:7496-7515 | None:intergenic | 25.0% |
| ! | TGTAGTCAAAAATACTACTA+AGG | + | tig0019144:7644-7663 | Msa1370910:intron | 25.0% |
| ! | TACTACTAAGGATAAAAACT+AGG | + | tig0019144:7656-7675 | Msa1370910:intron | 25.0% |
| ! | ACTACTAAGGATAAAAACTA+GGG | + | tig0019144:7657-7676 | Msa1370910:intron | 25.0% |
| ! | GACATTCAATGAAAACTTAA+GGG | - | tig0019144:7699-7718 | None:intergenic | 25.0% |
| ! | TGACATTCAATGAAAACTTA+AGG | - | tig0019144:7700-7719 | None:intergenic | 25.0% |
| ! | AAACAGTGTTAAACAAAAAG+GGG | - | tig0019144:7792-7811 | None:intergenic | 25.0% |
| ! | CAAACAGTGTTAAACAAAAA+GGG | - | tig0019144:7793-7812 | None:intergenic | 25.0% |
| !!! | AGTAGCTTTTTTTCTTTCAT+TGG | - | tig0019144:7844-7863 | None:intergenic | 25.0% |
| ! | CCAAAATAAGATAAAGGAAA+AGG | - | tig0019144:8025-8044 | None:intergenic | 25.0% |
| !!! | CCTTTTCCTTTATCTTATTT+TGG | + | tig0019144:8022-8041 | Msa1370910:intron | 25.0% |
| ! | ATAAATTCCCAACTCAATAA+GGG | - | tig0019144:8065-8084 | None:intergenic | 25.0% |
| ! | AATAAATTCCCAACTCAATA+AGG | - | tig0019144:8066-8085 | None:intergenic | 25.0% |
| ! | TTTATTGTCAGTATTGTGTT+TGG | + | tig0019144:8080-8099 | Msa1370910:intron | 25.0% |
| ! | TTATTGTCAGTATTGTGTTT+GGG | + | tig0019144:8081-8100 | Msa1370910:intron | 25.0% |
| !!! | ATTGCTTTGTTTAAAACTAG+AGG | + | tig0019144:8544-8563 | Msa1370910:intron | 25.0% |
| !!! | TTGCTTTGTTTAAAACTAGA+GGG | + | tig0019144:8545-8564 | Msa1370910:intron | 25.0% |
| ! | TTTATGTATTTAAGGACTGA+TGG | - | tig0019144:8694-8713 | None:intergenic | 25.0% |
| !! | ACAACTTTTGTTAGTGTTAT+TGG | - | tig0019144:9672-9691 | None:intergenic | 25.0% |
| !! | CAAGCTACTTTAAGTTTAAA+TGG | - | tig0019144:9741-9760 | None:intergenic | 25.0% |
| ! | AAGTAGCTTGAAACATTATA+TGG | + | tig0019144:9751-9770 | Msa1370910:intron | 25.0% |
| ! | GCATCTTCAATTGAATTTAT+AGG | + | tig0019144:9970-9989 | Msa1370910:intron | 25.0% |
| ! | AGTGTTTAACTGTGTATTAT+AGG | + | tig0019144:10030-10049 | Msa1370910:intron | 25.0% |
| !!! | TGTGAAGCTCTTTTTAATTT+GGG | - | tig0019144:10215-10234 | None:intergenic | 25.0% |
| !!! | ATGTGAAGCTCTTTTTAATT+TGG | - | tig0019144:10216-10235 | None:intergenic | 25.0% |
| ! | TTATGTGTTATGAGATTCTA+TGG | + | tig0019144:10426-10445 | Msa1370910:three_prime_UTR | 25.0% |
| !!! | GTTATTCTTTTAAAGTTGGA+AGG | - | tig0019144:10497-10516 | None:intergenic | 25.0% |
| ! | ATAGTTGTATTTGAAAGTAG+AGG | + | tig0019144:10600-10619 | Msa1370910:three_prime_UTR | 25.0% |
| !! | GTTGAGTTATGTTGAATTTT+TGG | + | tig0019144:10622-10641 | Msa1370910:three_prime_UTR | 25.0% |
| !!! | TTTTTGGATTGTTTCTTGTT+TGG | + | tig0019144:10638-10657 | Msa1370910:three_prime_UTR | 25.0% |
| !!! | TTTTGGATTGTTTCTTGTTT+GGG | + | tig0019144:10639-10658 | Msa1370910:three_prime_UTR | 25.0% |
| ATGATGATTATGATTGAGAG+TGG | - | tig0019144:6569-6588 | None:intergenic | 30.0% | |
| !! | ATTTTTGATTGAATTGCAGC+TGG | + | tig0019144:6689-6708 | Msa1370910:intron | 30.0% |
| !! | TTTTTGATTGAATTGCAGCT+GGG | + | tig0019144:6690-6709 | Msa1370910:intron | 30.0% |
| AAACAGAAGCAGAAAGAAAA+AGG | - | tig0019144:7322-7341 | None:intergenic | 30.0% | |
| ! | CATTATATAGGCACTGTTTA+AGG | + | tig0019144:7554-7573 | Msa1370910:intron | 30.0% |
| AAGGTAATGCACACATTAAT+TGG | + | tig0019144:7573-7592 | Msa1370910:intron | 30.0% | |
| CTTGTAGTAATGAAGTAGTT+AGG | + | tig0019144:7616-7635 | Msa1370910:intron | 30.0% | |
| ! | GTCAAGTTTAAAACTAGAGA+GGG | - | tig0019144:7729-7748 | None:intergenic | 30.0% |
| ! | TGTCAAGTTTAAAACTAGAG+AGG | - | tig0019144:7730-7749 | None:intergenic | 30.0% |
| AACAGTGTTAAACAAAAAGG+GGG | - | tig0019144:7791-7810 | None:intergenic | 30.0% | |
| GCAAACAGTGTTAAACAAAA+AGG | - | tig0019144:7794-7813 | None:intergenic | 30.0% | |
| !!! | TCCTTTTTTTCGTCTATAAC+CGG | + | tig0019144:7984-8003 | Msa1370910:intron | 30.0% |
| AAGGGGATGAAATTAAATAC+CGG | - | tig0019144:8006-8025 | None:intergenic | 30.0% | |
| AGAACCCCAAAATAAGATAA+AGG | - | tig0019144:8031-8050 | None:intergenic | 30.0% | |
| TTTCAAATCCCTTATTGAGT+TGG | + | tig0019144:8054-8073 | Msa1370910:intron | 30.0% | |
| TTCAAATCCCTTATTGAGTT+GGG | + | tig0019144:8055-8074 | Msa1370910:intron | 30.0% | |
| ! | AAAACTATGGTTGTTTCAAG+TGG | + | tig0019144:8127-8146 | Msa1370910:intron | 30.0% |
| ! | AACAGTGAGACAATGATTTT+GGG | - | tig0019144:8162-8181 | None:intergenic | 30.0% |
| ! | ATAGCTTTACTTCATGTTGT+TGG | - | tig0019144:8290-8309 | None:intergenic | 30.0% |
| ATGATAATAGTAAATGAGCC+AGG | + | tig0019144:8329-8348 | Msa1370910:intron | 30.0% | |
| !! | TGCTTTGTTTAAAACTAGAG+GGG | + | tig0019144:8546-8565 | Msa1370910:intron | 30.0% |
| ! | ATGTTATTTAGTGAAACCTC+AGG | + | tig0019144:8575-8594 | Msa1370910:intron | 30.0% |
| ! | TGTTATTTAGTGAAACCTCA+GGG | + | tig0019144:8576-8595 | Msa1370910:intron | 30.0% |
| ! | CTTTAAAAAACCAGAAACAG+CGG | + | tig0019144:8794-8813 | Msa1370910:intron | 30.0% |
| GAAGCTCATTTACACTAAAA+TGG | - | tig0019144:9498-9517 | None:intergenic | 30.0% | |
| TAGCAGATAATACAGAGAAT+GGG | + | tig0019144:9579-9598 | Msa1370910:intron | 30.0% | |
| AGTTGTAGAAATAGTTTCAG+TGG | + | tig0019144:9686-9705 | Msa1370910:intron | 30.0% | |
| TAGAAATAGTTTCAGTGGAA+TGG | + | tig0019144:9691-9710 | Msa1370910:intron | 30.0% | |
| TTAGTTCATAACTACAGAGT+AGG | + | tig0019144:9882-9901 | Msa1370910:intron | 30.0% | |
| AATTACTGGTAATACTCTCA+TGG | - | tig0019144:9923-9942 | None:intergenic | 30.0% | |
| !! | TTTTGATTGAATTGCAGCTG+GGG | + | tig0019144:6691-6710 | Msa1370910:intron | 35.0% |
| CTATTGCAATACATGTATGC+AGG | + | tig0019144:7374-7393 | Msa1370910:intron | 35.0% | |
| GAGAGAAGAACTAGAATAAG+TGG | + | tig0019144:7396-7415 | Msa1370910:CDS | 35.0% | |
| GAAAGTTAGGAAGCAAAAGT+TGG | - | tig0019144:7483-7502 | None:intergenic | 35.0% | |
| ACAGTGTTAAACAAAAAGGG+GGG | - | tig0019144:7790-7809 | None:intergenic | 35.0% | |
| ACCGGTTATAGACGAAAAAA+AGG | - | tig0019144:7988-8007 | None:intergenic | 35.0% | |
| GTATTGTGTTTGGGAAGATA+TGG | + | tig0019144:8090-8109 | Msa1370910:intron | 35.0% | |
| ! | CAACAGTGAGACAATGATTT+TGG | - | tig0019144:8163-8182 | None:intergenic | 35.0% |
| AGAAAGAAGAATGCTAGACA+TGG | + | tig0019144:8426-8445 | Msa1370910:intron | 35.0% | |
| !! | ATGACATTTCCAGCTTGTTA+TGG | - | tig0019144:8475-8494 | None:intergenic | 35.0% |
| GTTATTTAGTGAAACCTCAG+GGG | + | tig0019144:8577-8596 | Msa1370910:intron | 35.0% | |
| !!! | CGCTGTTTCTGGTTTTTTAA+AGG | - | tig0019144:8796-8815 | None:intergenic | 35.0% |
| ! | GGTTTTCTTTCAGTTACACA+TGG | - | tig0019144:8829-8848 | None:intergenic | 35.0% |
| TGTGTAACTGAAAGAAAACC+TGG | + | tig0019144:8829-8848 | Msa1370910:intron | 35.0% | |
| GTGTAACTGAAAGAAAACCT+GGG | + | tig0019144:8830-8849 | Msa1370910:intron | 35.0% | |
| TAGAATCGTCTGATACTACT+CGG | + | tig0019144:9208-9227 | Msa1370910:intron | 35.0% | |
| ACAATAATACTCTCAAGTCC+AGG | - | tig0019144:9264-9283 | None:intergenic | 35.0% | |
| TCACAGTAAAACATACTCTC+CGG | - | tig0019144:9370-9389 | None:intergenic | 35.0% | |
| GTAGCAGATAATACAGAGAA+TGG | + | tig0019144:9578-9597 | Msa1370910:intron | 35.0% | |
| ATTCGACTATACAAAGAGTC+AGG | + | tig0019144:9841-9860 | Msa1370910:intron | 35.0% | |
| ATAACTACAGAGTAGGTAGA+TGG | + | tig0019144:9889-9908 | Msa1370910:intron | 35.0% | |
| AACAAGTTATTCAGACATGC+TGG | + | tig0019144:10087-10106 | Msa1370910:CDS | 35.0% | |
| TTATTCAGACATGCTGGATT+TGG | + | tig0019144:10093-10112 | Msa1370910:CDS | 35.0% | |
| ATTCTACTCAGTAGAAGCTA+TGG | - | tig0019144:10170-10189 | None:intergenic | 35.0% | |
| !! | CATAGAAGTCAAGGTTTTGA+TGG | + | tig0019144:10456-10475 | Msa1370910:three_prime_UTR | 35.0% |
| TGTATGTTGTAATCTACCTG+TGG | + | tig0019144:10537-10556 | Msa1370910:three_prime_UTR | 35.0% | |
| CAGAAAAATAGAAGCGAGAA+CGG | + | tig0019144:10699-10718 | Msa1370910:three_prime_UTR | 35.0% | |
| AGAAAAATAGAAGCGAGAAC+GGG | + | tig0019144:10700-10719 | Msa1370910:three_prime_UTR | 35.0% | |
| TGATCCTCCTACTCCTATTA+TGG | - | tig0019144:6344-6363 | None:intergenic | 40.0% | |
| AAATAATGTTGTCCCGTTCC+AGG | - | tig0019144:6376-6395 | None:intergenic | 40.0% | |
| TATGATTGAGAGTGGCTAGA+TGG | - | tig0019144:6561-6580 | None:intergenic | 40.0% | |
| TTTGATTGAATTGCAGCTGG+GGG | + | tig0019144:6692-6711 | Msa1370910:intron | 40.0% | |
| AAGTCTGAATTGAGCTTCAC+TGG | + | tig0019144:6746-6765 | Msa1370910:CDS | 40.0% | |
| AGTCTGAATTGAGCTTCACT+GGG | + | tig0019144:6747-6766 | Msa1370910:CDS | 40.0% | |
| TCCATACTAGTACCAATACC+TGG | + | tig0019144:6846-6865 | Msa1370910:CDS | 40.0% | |
| CCATACTAGTACCAATACCT+GGG | + | tig0019144:6847-6866 | Msa1370910:CDS | 40.0% | |
| CATACTAGTACCAATACCTG+GGG | + | tig0019144:6848-6867 | Msa1370910:CDS | 40.0% | |
| CATTGAGGCAATGTAGAAGA+AGG | - | tig0019144:7033-7052 | None:intergenic | 40.0% | |
| AGATAGTACCTGAGTTTCGA+GGG | - | tig0019144:7056-7075 | None:intergenic | 40.0% | |
| GTGGGAGACTATACTGAATT+AGG | - | tig0019144:7152-7171 | None:intergenic | 40.0% | |
| GGGGAATATTATGCATAAGC+TGG | - | tig0019144:7194-7213 | None:intergenic | 40.0% | |
| TTTACAAGGGACGGAATCTT+GGG | - | tig0019144:7214-7233 | None:intergenic | 40.0% | |
| ! | TTTTACAAGGGACGGAATCT+TGG | - | tig0019144:7215-7234 | None:intergenic | 40.0% |
| CCTTATCCATGTTAGGTACA+AGG | - | tig0019144:7443-7462 | None:intergenic | 40.0% | |
| CCTTGTACCTAACATGGATA+AGG | + | tig0019144:7440-7459 | Msa1370910:CDS | 40.0% | |
| !! | GAAGCAAAAGTTGGTAGCAT+GGG | - | tig0019144:7474-7493 | None:intergenic | 40.0% |
| CAGTGTTAAACAAAAAGGGG+GGG | - | tig0019144:7789-7808 | None:intergenic | 40.0% | |
| TTTGCCCACGTTAAGTTAAG+AGG | + | tig0019144:7809-7828 | Msa1370910:intron | 40.0% | |
| GTAGCCTCTTAACTTAACGT+GGG | - | tig0019144:7816-7835 | None:intergenic | 40.0% | |
| AGTAGCCTCTTAACTTAACG+TGG | - | tig0019144:7817-7836 | None:intergenic | 40.0% | |
| ACAAATGAACCCCTCAATGA+AGG | + | tig0019144:7870-7889 | Msa1370910:intron | 40.0% | |
| GTTCAACAACCTTCATTGAG+GGG | - | tig0019144:7882-7901 | None:intergenic | 40.0% | |
| GGTTCAACAACCTTCATTGA+GGG | - | tig0019144:7883-7902 | None:intergenic | 40.0% | |
| TGGTTCAACAACCTTCATTG+AGG | - | tig0019144:7884-7903 | None:intergenic | 40.0% | |
| GTTGTTGAACCACTCAGTAA+AGG | + | tig0019144:7892-7911 | Msa1370910:intron | 40.0% | |
| GTTGTTCTCCATAGAGAAGA+AGG | + | tig0019144:7914-7933 | Msa1370910:intron | 40.0% | |
| CTTCTTGTCCTTCTTCTCTA+TGG | - | tig0019144:7925-7944 | None:intergenic | 40.0% | |
| CATAGAGAAGAAGGACAAGA+AGG | + | tig0019144:7923-7942 | Msa1370910:intron | 40.0% | |
| ! | TTGACCACTGTAGTTTGTCT+TGG | + | tig0019144:8209-8228 | Msa1370910:intron | 40.0% |
| ATTGCCAAGACAAACTACAG+TGG | - | tig0019144:8216-8235 | None:intergenic | 40.0% | |
| AGAAGAATGCTAGACATGGA+TGG | + | tig0019144:8430-8449 | Msa1370910:intron | 40.0% | |
| ATGCTAGACATGGATGGAAT+TGG | + | tig0019144:8436-8455 | Msa1370910:intron | 40.0% | |
| ACATGGATGGAATTGGCATA+AGG | + | tig0019144:8443-8462 | Msa1370910:intron | 40.0% | |
| ! | TAACTAACGGTGTTAACCCA+AGG | + | tig0019144:8515-8534 | Msa1370910:intron | 40.0% |
| ! | AACTAACGGTGTTAACCCAA+GGG | + | tig0019144:8516-8535 | Msa1370910:intron | 40.0% |
| AACTGAAAGAAAACCTGGGT+AGG | + | tig0019144:8834-8853 | Msa1370910:intron | 40.0% | |
| TTTGAGAACCGTAGTTCAGT+TGG | + | tig0019144:8896-8915 | Msa1370910:intron | 40.0% | |
| ACACTTCCTTTGCTGAAACA+CGG | - | tig0019144:9010-9029 | None:intergenic | 40.0% | |
| ! | CGATCATGACTACATTGGTT+AGG | + | tig0019144:9238-9257 | Msa1370910:intron | 40.0% |
| GGTGAATTGTTTCCCTTTAG+AGG | + | tig0019144:9342-9361 | Msa1370910:intron | 40.0% | |
| GTAACTCAAGTCACTCTCTT+TGG | - | tig0019144:9422-9441 | None:intergenic | 40.0% | |
| CATCTATGTTCAAAGCAAGC+AGG | - | tig0019144:9455-9474 | None:intergenic | 40.0% | |
| TAAGCTTCTACCGTCAACTT+TGG | + | tig0019144:9546-9565 | Msa1370910:intron | 40.0% | |
| TTGGCGGTTCAACATATCAA+AGG | + | tig0019144:10112-10131 | Msa1370910:CDS | 40.0% | |
| AGGTCTTCAAACTCAAGTTC+AGG | + | tig0019144:10132-10151 | Msa1370910:CDS | 40.0% | |
| !! | AACGGGACTAGTTAGAAATC+TGG | + | tig0019144:10717-10736 | Msa1370910:three_prime_UTR | 40.0% |
| ACAGAGCTCCATCAGTCAAA+CGG | + | tig0019144:6264-6283 | Msa1370910:CDS | 45.0% | |
| ACCACTGTGGATGCCATAAT+AGG | + | tig0019144:6328-6347 | Msa1370910:CDS | 45.0% | |
| TCCTATTATGGCATCCACAG+TGG | - | tig0019144:6332-6351 | None:intergenic | 45.0% | |
| GTGGATGCCATAATAGGAGT+AGG | + | tig0019144:6334-6353 | Msa1370910:CDS | 45.0% | |
| GATGCCATAATAGGAGTAGG+AGG | + | tig0019144:6337-6356 | Msa1370910:CDS | 45.0% | |
| CAGCAGAGATCTTCTTACGA+AGG | + | tig0019144:6469-6488 | Msa1370910:CDS | 45.0% | |
| TCTTCTTACGAAGGTCAAGC+TGG | + | tig0019144:6478-6497 | Msa1370910:CDS | 45.0% | |
| TTGATTGAATTGCAGCTGGG+GGG | + | tig0019144:6693-6712 | Msa1370910:intron | 45.0% | |
| GTCTGAATTGAGCTTCACTG+GGG | + | tig0019144:6748-6767 | Msa1370910:CDS | 45.0% | |
| TCTGAATTGAGCTTCACTGG+GGG | + | tig0019144:6749-6768 | Msa1370910:CDS | 45.0% | |
| !! | CCCAGGTATTGGTACTAGTA+TGG | - | tig0019144:6850-6869 | None:intergenic | 45.0% |
| AAGAAGGTCGGGATCATCAT+TGG | - | tig0019144:7017-7036 | None:intergenic | 45.0% | |
| AGGCAATGTAGAAGAAGGTC+GGG | - | tig0019144:7028-7047 | None:intergenic | 45.0% | |
| GAGGCAATGTAGAAGAAGGT+CGG | - | tig0019144:7029-7048 | None:intergenic | 45.0% | |
| GAGATAGTACCTGAGTTTCG+AGG | - | tig0019144:7057-7076 | None:intergenic | 45.0% | |
| TAGTCTCCCACAAACTTCTC+TGG | + | tig0019144:7161-7180 | Msa1370910:CDS | 45.0% | |
| CCATCTCCAGAGAAGTTTGT+GGG | - | tig0019144:7170-7189 | None:intergenic | 45.0% | |
| TCCATCTCCAGAGAAGTTTG+TGG | - | tig0019144:7171-7190 | None:intergenic | 45.0% | |
| TTACAAGGGACGGAATCTTG+GGG | - | tig0019144:7213-7232 | None:intergenic | 45.0% | |
| ! | GCTTGGCACGGATTTTACAA+GGG | - | tig0019144:7227-7246 | None:intergenic | 45.0% |
| ATCCTCGTAGCATTGCTGAA+CGG | + | tig0019144:7262-7281 | Msa1370910:CDS | 45.0% | |
| ! | TGGCAAGTTGAAGAAGTTGC+AGG | + | tig0019144:7416-7435 | Msa1370910:CDS | 45.0% |
| !! | GGAAGCAAAAGTTGGTAGCA+TGG | - | tig0019144:7475-7494 | None:intergenic | 45.0% |
| GGAGAACAACCTTTACTGAG+TGG | - | tig0019144:7904-7923 | None:intergenic | 45.0% | |
| AAATGAGCCAGGAAAGTTGC+AGG | + | tig0019144:8340-8359 | Msa1370910:intron | 45.0% | |
| ACTATAGCCTGCAACTTTCC+TGG | - | tig0019144:8350-8369 | None:intergenic | 45.0% | |
| AGGAGAATGCCATAACAAGC+TGG | + | tig0019144:8463-8482 | Msa1370910:intron | 45.0% | |
| ACAAAGCAATCACCTCCCTT+GGG | - | tig0019144:8534-8553 | None:intergenic | 45.0% | |
| AACAAAGCAATCACCTCCCT+TGG | - | tig0019144:8535-8554 | None:intergenic | 45.0% | |
| ATTTAGTGAAACCTCAGGGG+AGG | + | tig0019144:8580-8599 | Msa1370910:intron | 45.0% | |
| ACAGAGGAAGGCAGAAATGA+AGG | + | tig0019144:8757-8776 | Msa1370910:intron | 45.0% | |
| AACCAGAAACAGCGGAAGTA+AGG | + | tig0019144:8802-8821 | Msa1370910:intron | 45.0% | |
| AACGACATCACAGAGAAGAG+AGG | + | tig0019144:8935-8954 | Msa1370910:intron | 45.0% | |
| ACTAGACCGTGAGAGAGTAA+GGG | + | tig0019144:8960-8979 | Msa1370910:intron | 45.0% | |
| TAGTGTCCGTGTTTCAGCAA+AGG | + | tig0019144:9001-9020 | Msa1370910:intron | 45.0% | |
| GTACCAGACCAGTTTCAGAA+AGG | + | tig0019144:9054-9073 | Msa1370910:intron | 45.0% | |
| !! | AGACCTTTCTGAAACTGGTC+TGG | - | tig0019144:9060-9079 | None:intergenic | 45.0% |
| !! | GCAACAGACCTTTCTGAAAC+TGG | - | tig0019144:9065-9084 | None:intergenic | 45.0% |
| AAGGTCTGTTGCGAAACAGA+TGG | + | tig0019144:9073-9092 | Msa1370910:intron | 45.0% | |
| ! | CGAGTTTGAAGCAGGACTAT+AGG | - | tig0019144:9113-9132 | None:intergenic | 45.0% |
| ! | TGAATTCGCGAGTTTGAAGC+AGG | - | tig0019144:9121-9140 | None:intergenic | 45.0% |
| TCAGACGATTCTACGATCCA+CGG | - | tig0019144:9201-9220 | None:intergenic | 45.0% | |
| AATCGTCTGATACTACTCGG+CGG | + | tig0019144:9211-9230 | Msa1370910:intron | 45.0% | |
| GTTCGCGATCATGACTACAT+TGG | + | tig0019144:9233-9252 | Msa1370910:intron | 45.0% | |
| ! | ATGACTACATTGGTTAGGCC+TGG | + | tig0019144:9243-9262 | Msa1370910:intron | 45.0% |
| ! | TTGTTTCCCTTTAGAGGAGC+CGG | + | tig0019144:9348-9367 | Msa1370910:intron | 45.0% |
| CTTCTACCGTCAACTTTGGA+TGG | + | tig0019144:9550-9569 | Msa1370910:intron | 45.0% | |
| CTGCTACCATCCAAAGTTGA+CGG | - | tig0019144:9559-9578 | None:intergenic | 45.0% | |
| TTCAGACATGCTGGATTTGG+CGG | + | tig0019144:10096-10115 | Msa1370910:CDS | 45.0% | |
| ! | TGTACTTTGTTTGCATCCGC+AGG | - | tig0019144:10398-10417 | None:intergenic | 45.0% |
| TTCTAGACTACGTCTACCAC+AGG | - | tig0019144:10556-10575 | None:intergenic | 45.0% | |
| !!! | ATTATTATTATTATTAGTTT+GGG | - | tig0019144:6936-6955 | None:intergenic | 5.0% |
| !! | TATTATTATTATTATTAGTT+TGG | - | tig0019144:6937-6956 | None:intergenic | 5.0% |
| GTATCGTCCACCTTCCTCAT+CGG | + | tig0019144:6210-6229 | Msa1370910:CDS | 50.0% | |
| TATCGTCCACCTTCCTCATC+GGG | + | tig0019144:6211-6230 | Msa1370910:CDS | 50.0% | |
| GAAGAAGAACCCGATGAGGA+AGG | - | tig0019144:6223-6242 | None:intergenic | 50.0% | |
| GGAAGAAGAAGAACCCGATG+AGG | - | tig0019144:6227-6246 | None:intergenic | 50.0% | |
| CTGTTGTTGCTGAGACGAAG+AGG | - | tig0019144:6248-6267 | None:intergenic | 50.0% | |
| CAGAGCTCCATCAGTCAAAC+GGG | + | tig0019144:6265-6284 | Msa1370910:CDS | 50.0% | |
| TGTGAGACCCGTTTGACTGA+TGG | - | tig0019144:6275-6294 | None:intergenic | 50.0% | |
| TCAGTCAAACGGGTCTCACA+AGG | + | tig0019144:6275-6294 | Msa1370910:CDS | 50.0% | |
| CAAACGGGTCTCACAAGGTA+TGG | + | tig0019144:6280-6299 | Msa1370910:CDS | 50.0% | |
| ATCACGCCTTCTTCCTGGAA+CGG | + | tig0019144:6360-6379 | Msa1370910:CDS | 50.0% | |
| TCTTACGAAGGTCAAGCTGG+TGG | + | tig0019144:6481-6500 | Msa1370910:CDS | 50.0% | |
| ! | GCTTTTCTGACGGAGCAAAG+CGG | - | tig0019144:6518-6537 | None:intergenic | 50.0% |
| GGCTAGATGGTTGAGAAAGC+CGG | - | tig0019144:6548-6567 | None:intergenic | 50.0% | |
| GATTATGCATCAGCAGCAGC+TGG | + | tig0019144:6812-6831 | Msa1370910:CDS | 50.0% | |
| ACTAGTACCAATACCTGGGG+TGG | + | tig0019144:6851-6870 | Msa1370910:CDS | 50.0% | |
| ! | CCCACAAACTTCTCTGGAGA+TGG | + | tig0019144:7167-7186 | Msa1370910:CDS | 50.0% |
| ! | GGCACGGATTTTACAAGGGA+CGG | - | tig0019144:7223-7242 | None:intergenic | 50.0% |
| ! | CGCTTGGCACGGATTTTACA+AGG | - | tig0019144:7228-7247 | None:intergenic | 50.0% |
| TGTAAAATCCGTGCCAAGCG+TGG | + | tig0019144:7228-7247 | Msa1370910:CDS | 50.0% | |
| AGCAATGCTACGAGGATGAG+TGG | - | tig0019144:7259-7278 | None:intergenic | 50.0% | |
| TCCTCGTAGCATTGCTGAAC+GGG | + | tig0019144:7263-7282 | Msa1370910:CDS | 50.0% | |
| GCAGGACCTTGTACCTAACA+TGG | + | tig0019144:7434-7453 | Msa1370910:CDS | 50.0% | |
| ! | TAACGGTGTTAACCCAAGGG+AGG | + | tig0019144:8519-8538 | Msa1370910:intron | 50.0% |
| AATTGCACTAACCTCCCCTG+AGG | - | tig0019144:8594-8613 | None:intergenic | 50.0% | |
| TTCACCCACAGTTCAGACAG+AGG | + | tig0019144:8741-8760 | Msa1370910:intron | 50.0% | |
| CCTTCCTCTGTCTGAACTGT+GGG | - | tig0019144:8748-8767 | None:intergenic | 50.0% | |
| ! | GACCTTACTTCCGCTGTTTC+TGG | - | tig0019144:8807-8826 | None:intergenic | 50.0% |
| ! | TCAACTTTTGCTGCCTACCC+AGG | - | tig0019144:8850-8869 | None:intergenic | 50.0% |
| GAGAACCGTAGTTCAGTTGG+CGG | + | tig0019144:8899-8918 | Msa1370910:intron | 50.0% | |
| GACTAGACCGTGAGAGAGTA+AGG | + | tig0019144:8959-8978 | Msa1370910:intron | 50.0% | |
| CTAGACCGTGAGAGAGTAAG+GGG | + | tig0019144:8961-8980 | Msa1370910:intron | 50.0% | |
| GTTTGCCCCTTACTCTCTCA+CGG | - | tig0019144:8969-8988 | None:intergenic | 50.0% | |
| CAGCAATCCTGGCTGTATGA+CGG | + | tig0019144:9162-9181 | Msa1370910:intron | 50.0% | |
| TGTATGACGGCAAGGAACCA+TGG | + | tig0019144:9175-9194 | Msa1370910:intron | 50.0% | |
| TACTCTCCGGCTCCTCTAAA+GGG | - | tig0019144:9357-9376 | None:intergenic | 50.0% | |
| ATACTCTCCGGCTCCTCTAA+AGG | - | tig0019144:9358-9377 | None:intergenic | 50.0% | |
| GACCTTGAGAATTGCACCTG+CGG | + | tig0019144:10379-10398 | Msa1370910:CDS | 50.0% | |
| ATCCGCAGGTGCAATTCTCA+AGG | - | tig0019144:10384-10403 | None:intergenic | 50.0% | |
| GGCACTGTGCATAGAAGTCA+AGG | + | tig0019144:10447-10466 | Msa1370910:three_prime_UTR | 50.0% | |
| GAAGAACCCGATGAGGAAGG+TGG | - | tig0019144:6220-6239 | None:intergenic | 55.0% | |
| ! | GTGGTGTTGAGGAGAGAGCT+AGG | - | tig0019144:6313-6332 | None:intergenic | 55.0% |
| CTCTCTCCTCAACACCACTG+TGG | + | tig0019144:6315-6334 | Msa1370910:CDS | 55.0% | |
| ! | TGGCATCCACAGTGGTGTTG+AGG | - | tig0019144:6324-6343 | None:intergenic | 55.0% |
| TCACGCCTTCTTCCTGGAAC+GGG | + | tig0019144:6361-6380 | Msa1370910:CDS | 55.0% | |
| GTTGTCCCGTTCCAGGAAGA+AGG | - | tig0019144:6369-6388 | None:intergenic | 55.0% | |
| !! | GGTCAAGCTGGTGGCTTTGA+TGG | + | tig0019144:6490-6509 | Msa1370910:CDS | 55.0% |
| ! | CGGCTGGAGAGCTTTTCTGA+CGG | - | tig0019144:6528-6547 | None:intergenic | 55.0% |
| CGTCAGAAAAGCTCTCCAGC+CGG | + | tig0019144:6526-6545 | Msa1370910:CDS | 55.0% | |
| AGATGGTTGAGAAAGCCGGC+TGG | - | tig0019144:6544-6563 | None:intergenic | 55.0% | |
| TGGGGGGTTCACAATCACGA+GGG | + | tig0019144:6709-6728 | Msa1370910:CDS | 55.0% | |
| GAATTGAGCTTCACTGGGGG+AGG | + | tig0019144:6752-6771 | Msa1370910:CDS | 55.0% | |
| GCATCAGCAGCAGCTGGAAA+TGG | + | tig0019144:6818-6837 | Msa1370910:CDS | 55.0% | |
| AGTACCAATACCTGGGGTGG+AGG | + | tig0019144:6854-6873 | Msa1370910:CDS | 55.0% | |
| !! | CCTGAGTTTCGAGGGCATTG+AGG | - | tig0019144:7048-7067 | None:intergenic | 55.0% |
| CCTCAATGCCCTCGAAACTC+AGG | + | tig0019144:7045-7064 | Msa1370910:CDS | 55.0% | |
| ACCCGTTCAGCAATGCTACG+AGG | - | tig0019144:7267-7286 | None:intergenic | 55.0% | |
| CCCACAGTTCAGACAGAGGA+AGG | + | tig0019144:8745-8764 | Msa1370910:intron | 55.0% | |
| GCCTTCCTCTGTCTGAACTG+TGG | - | tig0019144:8749-8768 | None:intergenic | 55.0% | |
| AGTTGAGAACGTGTCGCACG+CGG | + | tig0019144:8864-8883 | Msa1370910:intron | 55.0% | |
| AACCGTAGTTCAGTTGGCGG+TGG | + | tig0019144:8902-8921 | Msa1370910:intron | 55.0% | |
| ! | GATTGCTGGAGGTGTGTCCA+CGG | - | tig0019144:9150-9169 | None:intergenic | 55.0% |
| CATACAGCCAGGATTGCTGG+AGG | - | tig0019144:9161-9180 | None:intergenic | 55.0% | |
| CGTCATACAGCCAGGATTGC+TGG | - | tig0019144:9164-9183 | None:intergenic | 55.0% | |
| ATCCTGGCTGTATGACGGCA+AGG | + | tig0019144:9167-9186 | Msa1370910:intron | 55.0% | |
| TTCCTTGCCGTCATACAGCC+AGG | - | tig0019144:9172-9191 | None:intergenic | 55.0% | |
| GATTCTACGATCCACGGCCA+TGG | - | tig0019144:9195-9214 | None:intergenic | 55.0% | |
| GGAGGATCACGCCTTCTTCC+TGG | + | tig0019144:6355-6374 | Msa1370910:CDS | 60.0% | |
| CTGGGGGGTTCACAATCACG+AGG | + | tig0019144:6708-6727 | Msa1370910:CDS | 60.0% | |
| GGGGGGTTCACAATCACGAG+GGG | + | tig0019144:6710-6729 | Msa1370910:CDS | 60.0% | |
| ATTATCAGGGCCTCCACCCC+AGG | - | tig0019144:6867-6886 | None:intergenic | 60.0% | |
| ATGAGTGGCGCATCCACGCT+TGG | - | tig0019144:7244-7263 | None:intergenic | 60.0% | |
| CGCCACCGCCAACTGAACTA+CGG | - | tig0019144:8907-8926 | None:intergenic | 60.0% | |
| TCGCGAATTCAAACCCGCCG+TGG | + | tig0019144:9130-9149 | Msa1370910:intron | 60.0% | |
| GGACACACCTCCAGCAATCC+TGG | + | tig0019144:9151-9170 | Msa1370910:intron | 60.0% | |
| CTGCTGCTGCTGCTGCTGCT+GGG | - | tig0019144:6413-6432 | None:intergenic | 65.0% | |
| AGGGCCTCCACCCCAGGTAT+TGG | - | tig0019144:6861-6880 | None:intergenic | 65.0% | |
| TGGCGCATCCACGCTTGGCA+CGG | - | tig0019144:7239-7258 | None:intergenic | 65.0% | |
| TGAGAACGTGTCGCACGCGG+CGG | + | tig0019144:8867-8886 | Msa1370910:intron | 65.0% | |
| GTTCAGTTGGCGGTGGCGCA+AGG | + | tig0019144:8909-8928 | Msa1370910:intron | 65.0% | |
| ! | TGCTGGAGGTGTGTCCACGG+CGG | - | tig0019144:9147-9166 | None:intergenic | 65.0% |
| ACGGCAAGGAACCATGGCCG+TGG | + | tig0019144:9181-9200 | Msa1370910:intron | 65.0% | |
| GCTGCTGCTGCTGCTGCTGC+TGG | - | tig0019144:6414-6433 | None:intergenic | 70.0% | |
| CAGTTGGCGGTGGCGCAAGG+AGG | + | tig0019144:8912-8931 | Msa1370910:intron | 70.0% | |
| ! | GCTGGAGGTGTGTCCACGGC+GGG | - | tig0019144:9146-9165 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019144 | gene | 6208 | 10758 | 6208 | ID=Msa1370910;Name=Msa1370910 |
| tig0019144 | mRNA | 6208 | 10758 | 6208 | ID=Msa1370910-mRNA-1;Parent=Msa1370910;Name=Msa1370910-mRNA-1;_AED=0.15;_eAED=0.15;_QI=0|1|0.83|1|0.8|1|6|338|357 |
| tig0019144 | exon | 6208 | 6607 | 6208 | ID=Msa1370910-mRNA-1:exon:1956;Parent=Msa1370910-mRNA-1 |
| tig0019144 | exon | 6708 | 7066 | 6708 | ID=Msa1370910-mRNA-1:exon:1957;Parent=Msa1370910-mRNA-1 |
| tig0019144 | exon | 7159 | 7284 | 7159 | ID=Msa1370910-mRNA-1:exon:1958;Parent=Msa1370910-mRNA-1 |
| tig0019144 | exon | 7396 | 7461 | 7396 | ID=Msa1370910-mRNA-1:exon:1959;Parent=Msa1370910-mRNA-1 |
| tig0019144 | exon | 10085 | 10153 | 10085 | ID=Msa1370910-mRNA-1:exon:1960;Parent=Msa1370910-mRNA-1 |
| tig0019144 | exon | 10367 | 10758 | 10367 | ID=Msa1370910-mRNA-1:exon:1961;Parent=Msa1370910-mRNA-1 |
| tig0019144 | CDS | 6208 | 6607 | 6208 | ID=Msa1370910-mRNA-1:cds;Parent=Msa1370910-mRNA-1 |
| tig0019144 | CDS | 6708 | 7066 | 6708 | ID=Msa1370910-mRNA-1:cds;Parent=Msa1370910-mRNA-1 |
| tig0019144 | CDS | 7159 | 7284 | 7159 | ID=Msa1370910-mRNA-1:cds;Parent=Msa1370910-mRNA-1 |
| tig0019144 | CDS | 7396 | 7461 | 7396 | ID=Msa1370910-mRNA-1:cds;Parent=Msa1370910-mRNA-1 |
| tig0019144 | CDS | 10085 | 10153 | 10085 | ID=Msa1370910-mRNA-1:cds;Parent=Msa1370910-mRNA-1 |
| tig0019144 | CDS | 10367 | 10420 | 10367 | ID=Msa1370910-mRNA-1:cds;Parent=Msa1370910-mRNA-1 |
| tig0019144 | three_prime_UTR | 10421 | 10758 | 10421 | ID=Msa1370910-mRNA-1:three_prime_utr;Parent=Msa1370910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
