Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0496460 | XP_003599534.2 | 96.532 | 519 | 18 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1030 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0496460 | sp|Q9FFZ1|PPH_ARATH | 66.368 | 446 | 142 | 5 | 66 | 506 | 30 | 472 | 0.0 | 611 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0496460 | G7IZM0 | 96.532 | 519 | 18 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1030 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008330 | Msa0496460 | 0.808204 | 3.474886e-50 | -8.615850e-47 |
| Msa0021980 | Msa0496460 | 0.866289 | 3.180146e-65 | -8.615850e-47 |
| Msa0026120 | Msa0496460 | 0.803922 | 2.766533e-49 | -8.615850e-47 |
| Msa0030030 | Msa0496460 | 0.829301 | 5.556809e-55 | -8.615850e-47 |
| Msa0034310 | Msa0496460 | -0.800013 | 1.758443e-48 | -8.615850e-47 |
| Msa0039200 | Msa0496460 | 0.828767 | 7.484310e-55 | -8.615850e-47 |
| Msa0047470 | Msa0496460 | 0.805861 | 1.088049e-49 | -8.615850e-47 |
| Msa0050500 | Msa0496460 | 0.800061 | 1.719476e-48 | -8.615850e-47 |
| Msa0051100 | Msa0496460 | 0.815514 | 8.891139e-52 | -8.615850e-47 |
| Msa0053480 | Msa0496460 | 0.843058 | 1.769645e-58 | -8.615850e-47 |
| Msa0057740 | Msa0496460 | 0.803579 | 3.259257e-49 | -8.615850e-47 |
| Msa0059880 | Msa0496460 | -0.804902 | 1.728573e-49 | -8.615850e-47 |
| Msa0060600 | Msa0496460 | 0.817302 | 3.538349e-52 | -8.615850e-47 |
| Msa0070090 | Msa0496460 | 0.842767 | 2.114281e-58 | -8.615850e-47 |
| Msa0077330 | Msa0496460 | 0.817724 | 2.842147e-52 | -8.615850e-47 |
| Msa0086820 | Msa0496460 | 0.823987 | 1.030082e-53 | -8.615850e-47 |
| Msa0103060 | Msa0496460 | 0.826091 | 3.280474e-54 | -8.615850e-47 |
| Msa0105340 | Msa0496460 | 0.807417 | 5.105884e-50 | -8.615850e-47 |
| Msa0110500 | Msa0496460 | 0.808168 | 3.535623e-50 | -8.615850e-47 |
| Msa0117300 | Msa0496460 | 0.844444 | 7.533605e-59 | -8.615850e-47 |
| Msa0133670 | Msa0496460 | 0.828490 | 8.734545e-55 | -8.615850e-47 |
| Msa0133880 | Msa0496460 | 0.832242 | 1.056916e-55 | -8.615850e-47 |
| Msa0151690 | Msa0496460 | 0.805836 | 1.101374e-49 | -8.615850e-47 |
| Msa0160650 | Msa0496460 | 0.833195 | 6.131112e-56 | -8.615850e-47 |
| Msa0169960 | Msa0496460 | 0.840294 | 9.482163e-58 | -8.615850e-47 |
| Msa0184030 | Msa0496460 | 0.827924 | 1.195588e-54 | -8.615850e-47 |
| Msa0184120 | Msa0496460 | 0.828061 | 1.108530e-54 | -8.615850e-47 |
| Msa0188500 | Msa0496460 | 0.860380 | 2.150146e-63 | -8.615850e-47 |
| Msa0200840 | Msa0496460 | 0.834306 | 3.235292e-56 | -8.615850e-47 |
| Msa0200870 | Msa0496460 | 0.847042 | 1.485224e-59 | -8.615850e-47 |
| Msa0203180 | Msa0496460 | 0.846045 | 2.778676e-59 | -8.615850e-47 |
| Msa0205400 | Msa0496460 | 0.818724 | 1.688488e-52 | -8.615850e-47 |
| Msa0213090 | Msa0496460 | 0.821746 | 3.427379e-53 | -8.615850e-47 |
| Msa0221940 | Msa0496460 | 0.807304 | 5.397400e-50 | -8.615850e-47 |
| Msa0223190 | Msa0496460 | 0.852350 | 4.890310e-61 | -8.615850e-47 |
| Msa0230980 | Msa0496460 | 0.824168 | 9.339264e-54 | -8.615850e-47 |
| Msa0369750 | Msa0496460 | 0.847373 | 1.205237e-59 | -8.615850e-47 |
| Msa0372990 | Msa0496460 | 0.824286 | 8.765779e-54 | -8.615850e-47 |
| Msa0378670 | Msa0496460 | 0.802653 | 5.065308e-49 | -8.615850e-47 |
| Msa0378700 | Msa0496460 | 0.806333 | 8.654671e-50 | -8.615850e-47 |
| Msa0379500 | Msa0496460 | 0.826147 | 3.182429e-54 | -8.615850e-47 |
| Msa0379720 | Msa0496460 | 0.815025 | 1.141764e-51 | -8.615850e-47 |
| Msa0379820 | Msa0496460 | 0.808707 | 2.712875e-50 | -8.615850e-47 |
| Msa0379850 | Msa0496460 | 0.811704 | 6.129392e-51 | -8.615850e-47 |
| Msa0389050 | Msa0496460 | 0.824516 | 7.736965e-54 | -8.615850e-47 |
| Msa0389830 | Msa0496460 | 0.815896 | 7.309699e-52 | -8.615850e-47 |
| Msa0401570 | Msa0496460 | 0.878887 | 1.951795e-69 | -8.615850e-47 |
| Msa0403720 | Msa0496460 | 0.816311 | 5.904224e-52 | -8.615850e-47 |
| Msa0404180 | Msa0496460 | 0.815344 | 9.702322e-52 | -8.615850e-47 |
| Msa0408160 | Msa0496460 | 0.827773 | 1.300162e-54 | -8.615850e-47 |
| Msa0411000 | Msa0496460 | 0.853826 | 1.848480e-61 | -8.615850e-47 |
| Msa0414010 | Msa0496460 | 0.805463 | 1.318575e-49 | -8.615850e-47 |
| Msa0419620 | Msa0496460 | -0.820876 | 5.439726e-53 | -8.615850e-47 |
| Msa0421390 | Msa0496460 | 0.848964 | 4.381906e-60 | -8.615850e-47 |
| Msa0427050 | Msa0496460 | 0.854269 | 1.376930e-61 | -8.615850e-47 |
| Msa0429100 | Msa0496460 | 0.803590 | 3.242018e-49 | -8.615850e-47 |
| Msa0429130 | Msa0496460 | 0.827003 | 1.988591e-54 | -8.615850e-47 |
| Msa0431940 | Msa0496460 | 0.833298 | 5.778346e-56 | -8.615850e-47 |
| Msa0448400 | Msa0496460 | 0.926511 | 4.242919e-91 | -8.615850e-47 |
| Msa0451370 | Msa0496460 | 0.805926 | 1.054371e-49 | -8.615850e-47 |
| Msa0452010 | Msa0496460 | 0.803724 | 3.041289e-49 | -8.615850e-47 |
| Msa0454940 | Msa0496460 | 0.819668 | 1.028967e-52 | -8.615850e-47 |
| Msa0455230 | Msa0496460 | 0.847831 | 9.014944e-60 | -8.615850e-47 |
| Msa0456480 | Msa0496460 | 0.858909 | 5.959664e-63 | -8.615850e-47 |
| Msa0463960 | Msa0496460 | 0.834198 | 3.442484e-56 | -8.615850e-47 |
| Msa0473450 | Msa0496460 | 0.836577 | 8.627150e-57 | -8.615850e-47 |
| Msa0475360 | Msa0496460 | 0.839658 | 1.388775e-57 | -8.615850e-47 |
| Msa0242700 | Msa0496460 | -0.800298 | 1.538993e-48 | -8.615850e-47 |
| Msa0243470 | Msa0496460 | 0.845624 | 3.615466e-59 | -8.615850e-47 |
| Msa0243820 | Msa0496460 | 0.839774 | 1.295470e-57 | -8.615850e-47 |
| Msa0246300 | Msa0496460 | 0.827884 | 1.222586e-54 | -8.615850e-47 |
| Msa0248600 | Msa0496460 | 0.822734 | 2.021575e-53 | -8.615850e-47 |
| Msa0253370 | Msa0496460 | 0.802492 | 5.467109e-49 | -8.615850e-47 |
| Msa0256170 | Msa0496460 | 0.823236 | 1.543701e-53 | -8.615850e-47 |
| Msa0256410 | Msa0496460 | 0.801741 | 7.803824e-49 | -8.615850e-47 |
| Msa0256430 | Msa0496460 | 0.802989 | 4.316811e-49 | -8.615850e-47 |
| Msa0264240 | Msa0496460 | 0.835194 | 1.933597e-56 | -8.615850e-47 |
| Msa0264420 | Msa0496460 | 0.868328 | 7.087541e-66 | -8.615850e-47 |
| Msa0270460 | Msa0496460 | 0.833752 | 4.452973e-56 | -8.615850e-47 |
| Msa0270610 | Msa0496460 | 0.804573 | 2.024989e-49 | -8.615850e-47 |
| Msa0278670 | Msa0496460 | 0.803824 | 2.898307e-49 | -8.615850e-47 |
| Msa0281940 | Msa0496460 | 0.834174 | 3.490963e-56 | -8.615850e-47 |
| Msa0282500 | Msa0496460 | 0.847489 | 1.119987e-59 | -8.615850e-47 |
| Msa0284870 | Msa0496460 | 0.832957 | 7.028467e-56 | -8.615850e-47 |
| Msa0286910 | Msa0496460 | 0.805888 | 1.074161e-49 | -8.615850e-47 |
| Msa0288320 | Msa0496460 | 0.808013 | 3.814407e-50 | -8.615850e-47 |
| Msa0301300 | Msa0496460 | 0.801765 | 7.714781e-49 | -8.615850e-47 |
| Msa0302310 | Msa0496460 | 0.847029 | 1.497413e-59 | -8.615850e-47 |
| Msa0304990 | Msa0496460 | 0.805225 | 1.479359e-49 | -8.615850e-47 |
| Msa0305580 | Msa0496460 | 0.819919 | 9.018390e-53 | -8.615850e-47 |
| Msa0306130 | Msa0496460 | 0.806869 | 6.672119e-50 | -8.615850e-47 |
| Msa0311330 | Msa0496460 | 0.872835 | 2.343202e-67 | -8.615850e-47 |
| Msa0323630 | Msa0496460 | 0.818483 | 1.915085e-52 | -8.615850e-47 |
| Msa0325510 | Msa0496460 | 0.820501 | 6.633060e-53 | -8.615850e-47 |
| Msa0327150 | Msa0496460 | 0.811987 | 5.317665e-51 | -8.615850e-47 |
| Msa0330270 | Msa0496460 | 0.809266 | 2.059444e-50 | -8.615850e-47 |
| Msa0330400 | Msa0496460 | 0.814937 | 1.194380e-51 | -8.615850e-47 |
| Msa0331740 | Msa0496460 | 0.819733 | 9.946404e-53 | -8.615850e-47 |
| Msa0339560 | Msa0496460 | 0.859805 | 3.207877e-63 | -8.615850e-47 |
| Msa0339670 | Msa0496460 | 0.863076 | 3.222916e-64 | -8.615850e-47 |
| Msa0343200 | Msa0496460 | 0.828938 | 6.805479e-55 | -8.615850e-47 |
| Msa0352640 | Msa0496460 | 0.862161 | 6.163444e-64 | -8.615850e-47 |
| Msa0362430 | Msa0496460 | 0.837009 | 6.693754e-57 | -8.615850e-47 |
| Msa0363460 | Msa0496460 | 0.846714 | 1.825869e-59 | -8.615850e-47 |
| Msa0364010 | Msa0496460 | 0.822333 | 2.505836e-53 | -8.615850e-47 |
| Msa0496460 | Msa0496470 | 0.937836 | 1.811254e-98 | -8.615850e-47 |
| Msa0496460 | Msa0496570 | 0.949905 | 4.922046e-108 | -8.615850e-47 |
| Msa0496460 | Msa0502910 | 0.834566 | 2.784057e-56 | -8.615850e-47 |
| Msa0496460 | Msa0509500 | 0.801227 | 9.944578e-49 | -8.615850e-47 |
| Msa0496460 | Msa0509510 | 0.850429 | 1.708276e-60 | -8.615850e-47 |
| Msa0496460 | Msa0511720 | -0.801822 | 7.510840e-49 | -8.615850e-47 |
| Msa0496460 | Msa0512770 | 0.804235 | 2.381461e-49 | -8.615850e-47 |
| Msa0496460 | Msa0516310 | 0.837846 | 4.084139e-57 | -8.615850e-47 |
| Msa0496460 | Msa0520810 | 0.844253 | 8.476752e-59 | -8.615850e-47 |
| Msa0496460 | Msa0534420 | 0.806409 | 8.342102e-50 | -8.615850e-47 |
| Msa0496460 | Msa0544930 | 0.808449 | 3.079822e-50 | -8.615850e-47 |
| Msa0496460 | Msa0546370 | 0.868277 | 7.357573e-66 | -8.615850e-47 |
| Msa0496460 | Msa0549330 | 0.845915 | 3.015586e-59 | -8.615850e-47 |
| Msa0496460 | Msa0549740 | 0.829516 | 4.927385e-55 | -8.615850e-47 |
| Msa0496460 | Msa0554440 | 0.824660 | 7.155378e-54 | -8.615850e-47 |
| Msa0496460 | Msa0558890 | 0.816415 | 5.595712e-52 | -8.615850e-47 |
| Msa0496460 | Msa0560370 | 0.811554 | 6.607115e-51 | -8.615850e-47 |
| Msa0496460 | Msa0568490 | 0.816264 | 6.048177e-52 | -8.615850e-47 |
| Msa0496460 | Msa0575540 | 0.812860 | 3.427983e-51 | -8.615850e-47 |
| Msa0496460 | Msa0579180 | 0.805698 | 1.177578e-49 | -8.615850e-47 |
| Msa0496460 | Msa0579240 | 0.800467 | 1.421896e-48 | -8.615850e-47 |
| Msa0496460 | Msa0585930 | 0.828686 | 7.831009e-55 | -8.615850e-47 |
| Msa0496460 | Msa0595240 | 0.806655 | 7.403827e-50 | -8.615850e-47 |
| Msa0496460 | Msa0598250 | 0.802902 | 4.499591e-49 | -8.615850e-47 |
| Msa0496460 | Msa0601920 | -0.831729 | 1.415230e-55 | -8.615850e-47 |
| Msa0496460 | Msa0604640 | 0.836968 | 6.854318e-57 | -8.615850e-47 |
| Msa0496460 | Msa0605230 | 0.802632 | 5.117087e-49 | -8.615850e-47 |
| Msa0496460 | Msa0606680 | 0.805854 | 1.092001e-49 | -8.615850e-47 |
| Msa0496460 | Msa0617370 | 0.814005 | 1.920254e-51 | -8.615850e-47 |
| Msa0496460 | Msa0620750 | 0.808823 | 2.562442e-50 | -8.615850e-47 |
| Msa0496460 | Msa0623360 | 0.808395 | 3.162984e-50 | -8.615850e-47 |
| Msa0496460 | Msa0626230 | 0.817788 | 2.749608e-52 | -8.615850e-47 |
| Msa0496460 | Msa0630850 | 0.847432 | 1.160875e-59 | -8.615850e-47 |
| Msa0496460 | Msa0632560 | 0.820582 | 6.356539e-53 | -8.615850e-47 |
| Msa0496460 | Msa0639030 | 0.819766 | 9.777391e-53 | -8.615850e-47 |
| Msa0496460 | Msa0643020 | -0.822760 | 1.993212e-53 | -8.615850e-47 |
| Msa0496460 | Msa0646390 | 0.814314 | 1.640587e-51 | -8.615850e-47 |
| Msa0496460 | Msa0648170 | 0.812401 | 4.319815e-51 | -8.615850e-47 |
| Msa0496460 | Msa0648200 | 0.828301 | 9.703445e-55 | -8.615850e-47 |
| Msa0496460 | Msa0648300 | 0.846878 | 1.646958e-59 | -8.615850e-47 |
| Msa0496460 | Msa0651790 | 0.818927 | 1.518001e-52 | -8.615850e-47 |
| Msa0496460 | Msa0653710 | 0.827854 | 1.242916e-54 | -8.615850e-47 |
| Msa0496460 | Msa0654060 | 0.808765 | 2.636998e-50 | -8.615850e-47 |
| Msa0496460 | Msa0656270 | 0.838603 | 2.607738e-57 | -8.615850e-47 |
| Msa0496460 | Msa0656680 | 0.815626 | 8.394818e-52 | -8.615850e-47 |
| Msa0496460 | Msa0664020 | 0.802589 | 5.221591e-49 | -8.615850e-47 |
| Msa0496460 | Msa0664110 | 0.807552 | 4.779699e-50 | -8.615850e-47 |
| Msa0496460 | Msa0664130 | 0.835237 | 1.886555e-56 | -8.615850e-47 |
| Msa0496460 | Msa0681880 | 0.824883 | 6.341787e-54 | -8.615850e-47 |
| Msa0496460 | Msa0682730 | -0.828158 | 1.049982e-54 | -8.615850e-47 |
| Msa0496460 | Msa0691140 | 0.816725 | 4.770024e-52 | -8.615850e-47 |
| Msa0496460 | Msa0697600 | 0.828652 | 7.983044e-55 | -8.615850e-47 |
| Msa0496460 | Msa0700070 | 0.831833 | 1.334023e-55 | -8.615850e-47 |
| Msa0496460 | Msa0705050 | 0.810663 | 1.030432e-50 | -8.615850e-47 |
| Msa0496460 | Msa0713530 | 0.812330 | 4.475440e-51 | -8.615850e-47 |
| Msa0496460 | Msa0722930 | 0.827840 | 1.252785e-54 | -8.615850e-47 |
| Msa0496460 | Msa0723140 | 0.834420 | 3.027779e-56 | -8.615850e-47 |
| Msa0496460 | Msa0724050 | 0.812234 | 4.697764e-51 | -8.615850e-47 |
| Msa0496460 | Msa0729780 | 0.824422 | 8.142771e-54 | -8.615850e-47 |
| Msa0496460 | Msa0733400 | 0.804314 | 2.293094e-49 | -8.615850e-47 |
| Msa0496460 | Msa0736930 | 0.831326 | 1.778139e-55 | -8.615850e-47 |
| Msa0496460 | Msa0738600 | 0.865058 | 7.774625e-65 | -8.615850e-47 |
| Msa0496460 | Msa0739570 | 0.823341 | 1.459012e-53 | -8.615850e-47 |
| Msa0496460 | Msa0739610 | 0.820147 | 7.997692e-53 | -8.615850e-47 |
| Msa0496460 | Msa0741600 | 0.805986 | 1.023984e-49 | -8.615850e-47 |
| Msa0496460 | Msa0755590 | 0.804213 | 2.405826e-49 | -8.615850e-47 |
| Msa0496460 | Msa0756410 | 0.841830 | 3.745142e-58 | -8.615850e-47 |
| Msa0496460 | Msa0756940 | 0.821022 | 5.035042e-53 | -8.615850e-47 |
| Msa0496460 | Msa0763880 | 0.813369 | 2.651013e-51 | -8.615850e-47 |
| Msa0496460 | Msa0763910 | 0.811032 | 8.573409e-51 | -8.615850e-47 |
| Msa0496460 | Msa0765040 | 0.800157 | 1.643978e-48 | -8.615850e-47 |
| Msa0496460 | Msa0766880 | 0.809743 | 1.627387e-50 | -8.615850e-47 |
| Msa0496460 | Msa0770020 | 0.826839 | 2.176862e-54 | -8.615850e-47 |
| Msa0496460 | Msa0771960 | 0.817652 | 2.950924e-52 | -8.615850e-47 |
| Msa0496460 | Msa0772040 | 0.825119 | 5.575783e-54 | -8.615850e-47 |
| Msa0496460 | Msa0773260 | 0.810942 | 8.970568e-51 | -8.615850e-47 |
| Msa0496460 | Msa0773290 | 0.838403 | 2.935466e-57 | -8.615850e-47 |
| Msa0496460 | Msa0775420 | 0.816586 | 5.122613e-52 | -8.615850e-47 |
| Msa0496460 | Msa0778580 | 0.828166 | 1.045409e-54 | -8.615850e-47 |
| Msa0496460 | Msa0779540 | 0.811221 | 7.804276e-51 | -8.615850e-47 |
| Msa0496460 | Msa0782030 | 0.820365 | 7.127896e-53 | -8.615850e-47 |
| Msa0496460 | Msa0796460 | 0.878041 | 3.870552e-69 | -8.615850e-47 |
| Msa0496460 | Msa0807050 | 0.833647 | 4.728991e-56 | -8.615850e-47 |
| Msa0496460 | Msa0807980 | 0.905808 | 2.901374e-80 | -8.615850e-47 |
| Msa0496460 | Msa0811940 | 0.819320 | 1.235428e-52 | -8.615850e-47 |
| Msa0496460 | Msa0815950 | 0.849116 | 3.975040e-60 | -8.615850e-47 |
| Msa0496460 | Msa0818950 | 0.864204 | 1.438535e-64 | -8.615850e-47 |
| Msa0496460 | Msa0819670 | 0.830295 | 3.182874e-55 | -8.615850e-47 |
| Msa0496460 | Msa0822370 | 0.813865 | 2.061124e-51 | -8.615850e-47 |
| Msa0496460 | Msa0832990 | 0.833560 | 4.971272e-56 | -8.615850e-47 |
| Msa0496460 | Msa0834200 | 0.806824 | 6.816882e-50 | -8.615850e-47 |
| Msa0496460 | Msa0834240 | 0.807920 | 3.992613e-50 | -8.615850e-47 |
| Msa0496460 | Msa0835010 | 0.806253 | 8.996781e-50 | -8.615850e-47 |
| Msa0496460 | Msa0835550 | 0.817901 | 2.592259e-52 | -8.615850e-47 |
| Msa0496460 | Msa0835580 | 0.815850 | 7.482309e-52 | -8.615850e-47 |
| Msa0496460 | Msa0836510 | 0.816013 | 6.881387e-52 | -8.615850e-47 |
| Msa0496460 | Msa0843280 | 0.812292 | 4.563497e-51 | -8.615850e-47 |
| Msa0496460 | Msa0844100 | 0.812632 | 3.845358e-51 | -8.615850e-47 |
| Msa0496460 | Msa0860270 | 0.806250 | 9.010333e-50 | -8.615850e-47 |
| Msa0496460 | Msa0861480 | 0.818556 | 1.842729e-52 | -8.615850e-47 |
| Msa0496460 | Msa0861560 | 0.832423 | 9.534378e-56 | -8.615850e-47 |
| Msa0496460 | Msa0861800 | 0.820142 | 8.017682e-53 | -8.615850e-47 |
| Msa0496460 | Msa0871310 | 0.812143 | 4.917974e-51 | -8.615850e-47 |
| Msa0496460 | Msa0873010 | 0.849292 | 3.551971e-60 | -8.615850e-47 |
| Msa0496460 | Msa0883390 | 0.829496 | 4.982574e-55 | -8.615850e-47 |
| Msa0496460 | Msa0883410 | 0.835160 | 1.972703e-56 | -8.615850e-47 |
| Msa0496460 | Msa0883660 | 0.816745 | 4.720047e-52 | -8.615850e-47 |
| Msa0496460 | Msa0883670 | 0.834392 | 3.077130e-56 | -8.615850e-47 |
| Msa0496460 | Msa0887000 | 0.817335 | 3.478371e-52 | -8.615850e-47 |
| Msa0496460 | Msa0887070 | 0.848503 | 5.879557e-60 | -8.615850e-47 |
| Msa0496460 | Msa0894500 | 0.801352 | 9.375166e-49 | -8.615850e-47 |
| Msa0496460 | Msa0897390 | 0.830704 | 2.528110e-55 | -8.615850e-47 |
| Msa0496460 | Msa0900200 | 0.803629 | 3.182706e-49 | -8.615850e-47 |
| Msa0496460 | Msa0903730 | 0.802092 | 6.608855e-49 | -8.615850e-47 |
| Msa0496460 | Msa0906280 | 0.815935 | 7.163895e-52 | -8.615850e-47 |
| Msa0496460 | Msa0913120 | 0.819953 | 8.858834e-53 | -8.615850e-47 |
| Msa0496460 | Msa0923910 | 0.804179 | 2.446194e-49 | -8.615850e-47 |
| Msa0496460 | Msa0927890 | 0.819112 | 1.377927e-52 | -8.615850e-47 |
| Msa0496460 | Msa0934830 | 0.804535 | 2.062071e-49 | -8.615850e-47 |
| Msa0496460 | Msa0938300 | 0.843640 | 1.237380e-58 | -8.615850e-47 |
| Msa0496460 | Msa0950410 | 0.845142 | 4.884653e-59 | -8.615850e-47 |
| Msa0496460 | Msa0951720 | 0.822229 | 2.649375e-53 | -8.615850e-47 |
| Msa0496460 | Msa0957800 | 0.802940 | 4.419515e-49 | -8.615850e-47 |
| Msa0496460 | Msa0967450 | 0.807112 | 5.926357e-50 | -8.615850e-47 |
| Msa0496460 | Msa0975560 | 0.828149 | 1.055317e-54 | -8.615850e-47 |
| Msa0496460 | Msa0978000 | 0.838417 | 2.912024e-57 | -8.615850e-47 |
| Msa0496460 | Msa0984840 | 0.813478 | 2.507831e-51 | -8.615850e-47 |
| Msa0496460 | Msa0984850 | 0.832907 | 7.229355e-56 | -8.615850e-47 |
| Msa0496460 | Msa0984860 | 0.815746 | 7.892303e-52 | -8.615850e-47 |
| Msa0496460 | Msa0985040 | 0.804844 | 1.777314e-49 | -8.615850e-47 |
| Msa0496460 | Msa0988500 | 0.830523 | 2.798798e-55 | -8.615850e-47 |
| Msa0496460 | Msa0995220 | 0.837430 | 5.220942e-57 | -8.615850e-47 |
| Msa0496460 | Msa0995660 | 0.816027 | 6.833565e-52 | -8.615850e-47 |
| Msa0496460 | Msa0999590 | 0.805079 | 1.587275e-49 | -8.615850e-47 |
| Msa0496460 | Msa1002990 | -0.800646 | 1.307408e-48 | -8.615850e-47 |
| Msa0496460 | Msa1008960 | 0.818590 | 1.810838e-52 | -8.615850e-47 |
| Msa0496460 | Msa1014120 | 0.804704 | 1.900668e-49 | -8.615850e-47 |
| Msa0496460 | Msa1016130 | 0.804299 | 2.308814e-49 | -8.615850e-47 |
| Msa0496460 | Msa1024580 | 0.837837 | 4.105494e-57 | -8.615850e-47 |
| Msa0496460 | Msa1031220 | 0.820451 | 6.811354e-53 | -8.615850e-47 |
| Msa0496460 | Msa1033230 | 0.833987 | 3.888108e-56 | -8.615850e-47 |
| Msa0496460 | Msa1035040 | -0.809424 | 1.905290e-50 | -8.615850e-47 |
| Msa0496460 | Msa1036360 | 0.812443 | 4.229511e-51 | -8.615850e-47 |
| Msa0496460 | Msa1038110 | 0.819263 | 1.273168e-52 | -8.615850e-47 |
| Msa0496460 | Msa1038820 | 0.821392 | 4.137964e-53 | -8.615850e-47 |
| Msa0496460 | Msa1041550 | 0.836191 | 1.081202e-56 | -8.615850e-47 |
| Msa0496460 | Msa1044330 | 0.802698 | 4.957590e-49 | -8.615850e-47 |
| Msa0496460 | Msa1044450 | 0.841249 | 5.327587e-58 | -8.615850e-47 |
| Msa0496460 | Msa1063180 | 0.821163 | 4.671494e-53 | -8.615850e-47 |
| Msa0496460 | Msa1063490 | 0.816048 | 6.759842e-52 | -8.615850e-47 |
| Msa0496460 | Msa1064920 | 0.805282 | 1.439577e-49 | -8.615850e-47 |
| Msa0496460 | Msa1067910 | 0.833738 | 4.488617e-56 | -8.615850e-47 |
| Msa0496460 | Msa1071310 | 0.836329 | 9.977308e-57 | -8.615850e-47 |
| Msa0496460 | Msa1071460 | 0.805127 | 1.551094e-49 | -8.615850e-47 |
| Msa0496460 | Msa1072350 | 0.803999 | 2.665587e-49 | -8.615850e-47 |
| Msa0496460 | Msa1072770 | 0.821677 | 3.554980e-53 | -8.615850e-47 |
| Msa0496460 | Msa1076630 | 0.801948 | 7.077250e-49 | -8.615850e-47 |
| Msa0496460 | Msa1076640 | 0.811302 | 7.494834e-51 | -8.615850e-47 |
| Msa0496460 | Msa1079610 | 0.855888 | 4.662697e-62 | -8.615850e-47 |
| Msa0496460 | Msa1080790 | 0.842122 | 3.135407e-58 | -8.615850e-47 |
| Msa0496460 | Msa1081530 | 0.855496 | 6.067773e-62 | -8.615850e-47 |
| Msa0496460 | Msa1102180 | 0.824841 | 6.485671e-54 | -8.615850e-47 |
| Msa0496460 | Msa1108530 | 0.832878 | 7.353273e-56 | -8.615850e-47 |
| Msa0496460 | Msa1108780 | 0.825217 | 5.286278e-54 | -8.615850e-47 |
| Msa0496460 | Msa1109890 | -0.814438 | 1.540411e-51 | -8.615850e-47 |
| Msa0496460 | Msa1113210 | 0.838705 | 2.453425e-57 | -8.615850e-47 |
| Msa0496460 | Msa1113280 | 0.816485 | 5.398930e-52 | -8.615850e-47 |
| Msa0496460 | Msa1117830 | 0.805650 | 1.205028e-49 | -8.615850e-47 |
| Msa0496460 | Msa1118930 | 0.839169 | 1.861258e-57 | -8.615850e-47 |
| Msa0496460 | Msa1122480 | 0.830176 | 3.404032e-55 | -8.615850e-47 |
| Msa0496460 | Msa1123340 | 0.805337 | 1.401713e-49 | -8.615850e-47 |
| Msa0496460 | Msa1124440 | 0.819637 | 1.045890e-52 | -8.615850e-47 |
| Msa0496460 | Msa1132950 | 0.834988 | 2.178959e-56 | -8.615850e-47 |
| Msa0496460 | Msa1152280 | 0.842156 | 3.071109e-58 | -8.615850e-47 |
| Msa0496460 | Msa1166450 | 0.830797 | 2.399171e-55 | -8.615850e-47 |
| Msa0496460 | Msa1168130 | 0.818971 | 1.483431e-52 | -8.615850e-47 |
| Msa0496460 | Msa1175590 | 0.816799 | 4.591102e-52 | -8.615850e-47 |
| Msa0496460 | Msa1182400 | 0.808910 | 2.455112e-50 | -8.615850e-47 |
| Msa0496460 | Msa1182780 | 0.816542 | 5.241217e-52 | -8.615850e-47 |
| Msa0496460 | Msa1186010 | 0.806455 | 8.156335e-50 | -8.615850e-47 |
| Msa0496460 | Msa1186580 | 0.823662 | 1.227900e-53 | -8.615850e-47 |
| Msa0496460 | Msa1188820 | 0.826117 | 3.234597e-54 | -8.615850e-47 |
| Msa0496460 | Msa1191390 | 0.802443 | 5.596544e-49 | -8.615850e-47 |
| Msa0496460 | Msa1194170 | -0.830563 | 2.737453e-55 | -8.615850e-47 |
| Msa0496460 | Msa1195860 | 0.817685 | 2.900523e-52 | -8.615850e-47 |
| Msa0496460 | Msa1198450 | 0.803715 | 3.054187e-49 | -8.615850e-47 |
| Msa0496460 | Msa1203380 | 0.820495 | 6.656803e-53 | -8.615850e-47 |
| Msa0496460 | Msa1208250 | 0.812817 | 3.503484e-51 | -8.615850e-47 |
| Msa0496460 | Msa1211280 | 0.806550 | 7.792124e-50 | -8.615850e-47 |
| Msa0496460 | Msa1211370 | 0.839584 | 1.452330e-57 | -8.615850e-47 |
| Msa0496460 | Msa1211390 | 0.834599 | 2.730461e-56 | -8.615850e-47 |
| Msa0496460 | Msa1216700 | 0.845435 | 4.069690e-59 | -8.615850e-47 |
| Msa0496460 | Msa1216900 | 0.842329 | 2.763127e-58 | -8.615850e-47 |
| Msa0496460 | Msa1221170 | -0.801973 | 6.993331e-49 | -8.615850e-47 |
| Msa0496460 | Msa1223510 | 0.840666 | 7.580262e-58 | -8.615850e-47 |
| Msa0496460 | Msa1230190 | 0.810617 | 1.054611e-50 | -8.615850e-47 |
| Msa0496460 | Msa1232330 | 0.806825 | 6.815539e-50 | -8.615850e-47 |
| Msa0496460 | Msa1233760 | 0.807971 | 3.895288e-50 | -8.615850e-47 |
| Msa0496460 | Msa1235760 | 0.801780 | 7.662844e-49 | -8.615850e-47 |
| Msa0496460 | Msa1237260 | 0.834846 | 2.366607e-56 | -8.615850e-47 |
| Msa0496460 | Msa1240820 | 0.816001 | 6.925881e-52 | -8.615850e-47 |
| Msa0496460 | Msa1242010 | 0.814576 | 1.435991e-51 | -8.615850e-47 |
| Msa0496460 | Msa1242990 | 0.845705 | 3.437707e-59 | -8.615850e-47 |
| Msa0496460 | Msa1244710 | 0.802299 | 5.991633e-49 | -8.615850e-47 |
| Msa0496460 | Msa1246420 | 0.804472 | 2.125376e-49 | -8.615850e-47 |
| Msa0496460 | Msa1248400 | 0.806344 | 8.608625e-50 | -8.615850e-47 |
| Msa0496460 | Msa1262740 | 0.809056 | 2.285253e-50 | -8.615850e-47 |
| Msa0496460 | Msa1263610 | 0.804312 | 2.294859e-49 | -8.615850e-47 |
| Msa0496460 | Msa1264140 | 0.828909 | 6.916459e-55 | -8.615850e-47 |
| Msa0496460 | Msa1265500 | -0.813522 | 2.453249e-51 | -8.615850e-47 |
| Msa0496460 | Msa1272130 | 0.810045 | 1.401084e-50 | -8.615850e-47 |
| Msa0496460 | Msa1275340 | 0.810782 | 9.710904e-51 | -8.615850e-47 |
| Msa0496460 | Msa1276070 | 0.810888 | 9.215548e-51 | -8.615850e-47 |
| Msa0496460 | Msa1282210 | 0.852239 | 5.260458e-61 | -8.615850e-47 |
| Msa0496460 | Msa1284390 | 0.830764 | 2.443943e-55 | -8.615850e-47 |
| Msa0496460 | Msa1287160 | 0.845249 | 4.569896e-59 | -8.615850e-47 |
| Msa0496460 | Msa1287340 | 0.833618 | 4.808646e-56 | -8.615850e-47 |
| Msa0496460 | Msa1289340 | 0.825807 | 3.831960e-54 | -8.615850e-47 |
| Msa0496460 | Msa1295010 | 0.804594 | 2.004464e-49 | -8.615850e-47 |
| Msa0496460 | Msa1302780 | 0.824235 | 9.008070e-54 | -8.615850e-47 |
| Msa0496460 | Msa1306700 | 0.859906 | 2.991439e-63 | -8.615850e-47 |
| Msa0496460 | Msa1311550 | 0.807202 | 5.672668e-50 | -8.615850e-47 |
| Msa0496460 | Msa1320530 | -0.816569 | 5.169027e-52 | -8.615850e-47 |
| Msa0496460 | Msa1322420 | 0.802415 | 5.672050e-49 | -8.615850e-47 |
| Msa0496460 | Msa1323920 | 0.831769 | 1.383555e-55 | -8.615850e-47 |
| Msa0496460 | Msa1327820 | 0.844018 | 9.801554e-59 | -8.615850e-47 |
| Msa0496460 | Msa1328600 | 0.809362 | 1.964758e-50 | -8.615850e-47 |
| Msa0496460 | Msa1329660 | 0.808584 | 2.882840e-50 | -8.615850e-47 |
| Msa0496460 | Msa1329820 | 0.816578 | 5.145258e-52 | -8.615850e-47 |
| Msa0496460 | Msa1342400 | 0.871297 | 7.606955e-67 | -8.615850e-47 |
| Msa0496460 | Msa1346540 | 0.819651 | 1.038550e-52 | -8.615850e-47 |
| Msa0496460 | Msa1351590 | 0.815890 | 7.331124e-52 | -8.615850e-47 |
| Msa0496460 | Msa1353280 | 0.837512 | 4.976029e-57 | -8.615850e-47 |
| Msa0496460 | Msa1355260 | 0.800772 | 1.232024e-48 | -8.615850e-47 |
| Msa0496460 | Msa1357380 | 0.817826 | 2.695244e-52 | -8.615850e-47 |
| Msa0496460 | Msa1357720 | 0.875914 | 2.116608e-68 | -8.615850e-47 |
| Msa0496460 | Msa1360380 | 0.812124 | 4.964383e-51 | -8.615850e-47 |
| Msa0496460 | Msa1366700 | 0.802548 | 5.325129e-49 | -8.615850e-47 |
| Msa0496460 | Msa1368660 | 0.827439 | 1.563335e-54 | -8.615850e-47 |
| Msa0496460 | Msa1370630 | 0.853497 | 2.297496e-61 | -8.615850e-47 |
| Msa0496460 | Msa1370910 | -0.819682 | 1.021499e-52 | -8.615850e-47 |
| Msa0496460 | Msa1381720 | 0.809823 | 1.563791e-50 | -8.615850e-47 |
| Msa0496460 | Msa1384980 | 0.812901 | 3.356850e-51 | -8.615850e-47 |
| Msa0496460 | Msa1385940 | 0.824043 | 9.997265e-54 | -8.615850e-47 |
| Msa0496460 | Msa1395580 | 0.823876 | 1.093643e-53 | -8.615850e-47 |
| Msa0496460 | Msa1397540 | 0.817602 | 3.027819e-52 | -8.615850e-47 |
| Msa0496460 | Msa1405470 | 0.828222 | 1.013751e-54 | -8.615850e-47 |
| Msa0496460 | Msa1407200 | 0.815115 | 1.090352e-51 | -8.615850e-47 |
| Msa0496460 | Msa1409050 | 0.818093 | 2.346471e-52 | -8.615850e-47 |
| Msa0496460 | Msa1409760 | 0.817822 | 2.701437e-52 | -8.615850e-47 |
| Msa0496460 | Msa1413220 | 0.811862 | 5.660832e-51 | -8.615850e-47 |
| Msa0496460 | Msa1413880 | 0.822107 | 2.827261e-53 | -8.615850e-47 |
| Msa0496460 | Msa1414560 | 0.816213 | 6.210017e-52 | -8.615850e-47 |
| Msa0496460 | Msa1415120 | 0.805264 | 1.451769e-49 | -8.615850e-47 |
| Msa0496460 | Msa1415270 | 0.838758 | 2.378092e-57 | -8.615850e-47 |
| Msa0496460 | Msa1427180 | 0.860287 | 2.294349e-63 | -8.615850e-47 |
| Msa0496460 | Msa1428440 | 0.851866 | 6.711033e-61 | -8.615850e-47 |
| Msa0496460 | Msa1428560 | 0.836287 | 1.022306e-56 | -8.615850e-47 |
| Msa0496460 | Msa1432250 | 0.811691 | 6.168180e-51 | -8.615850e-47 |
| Msa0496460 | Msa1433380 | 0.822250 | 2.618807e-53 | -8.615850e-47 |
| Msa0496460 | Msa1440180 | 0.809731 | 1.636632e-50 | -8.615850e-47 |
| Msa0496460 | Msa1445250 | 0.810877 | 9.266172e-51 | -8.615850e-47 |
| Msa0496460 | Msa1445700 | 0.802438 | 5.609235e-49 | -8.615850e-47 |
| Msa0496460 | Msa1446220 | 0.802837 | 4.641411e-49 | -8.615850e-47 |
| Msa0496460 | Msa1449670 | -0.800071 | 1.711404e-48 | -8.615850e-47 |
| Msa0496460 | Msa1449740 | 0.808224 | 3.440607e-50 | -8.615850e-47 |
| Msa0496460 | Msa1452200 | 0.875704 | 2.497595e-68 | -8.615850e-47 |
| Msa0496460 | Msa1457070 | 0.813369 | 2.651114e-51 | -8.615850e-47 |
| Msa0496460 | Msa1457450 | 0.840714 | 7.362773e-58 | -8.615850e-47 |
| Msa0496460 | Msa1459630 | 0.829718 | 4.400335e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0496460 | MtrunA17_Chr3g0090521 | 96.532 | 519 | 18 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1030 |
| Msa0496460 | MtrunA17_Chr8g0372991 | 29.032 | 372 | 209 | 12 | 95 | 456 | 45 | 371 | 3.00e-31 | 124 |
| Msa0496460 | MtrunA17_Chr5g0423381 | 24.847 | 326 | 207 | 9 | 132 | 457 | 60 | 347 | 1.88e-24 | 104 |
| Msa0496460 | MtrunA17_Chr1g0188361 | 24.781 | 343 | 194 | 13 | 129 | 450 | 91 | 390 | 1.21e-20 | 94.0 |
| Msa0496460 | MtrunA17_Chr4g0018641 | 25.938 | 320 | 179 | 10 | 139 | 452 | 411 | 678 | 8.14e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0496460 | AT5G13800.3 | 66.368 | 446 | 142 | 5 | 66 | 506 | 53 | 495 | 0.0 | 612 |
| Msa0496460 | AT5G13800.2 | 66.368 | 446 | 142 | 5 | 66 | 506 | 30 | 472 | 0.0 | 611 |
| Msa0496460 | AT5G13800.1 | 66.368 | 446 | 142 | 5 | 66 | 506 | 30 | 472 | 0.0 | 611 |
| Msa0496460 | AT5G13800.4 | 70.745 | 376 | 104 | 4 | 66 | 438 | 30 | 402 | 0.0 | 558 |
| Msa0496460 | AT4G36530.1 | 29.942 | 344 | 189 | 12 | 116 | 447 | 2 | 305 | 8.53e-28 | 114 |
| Msa0496460 | AT4G36530.2 | 30.696 | 316 | 170 | 12 | 138 | 447 | 90 | 362 | 1.98e-27 | 114 |
| Msa0496460 | AT5G19850.1 | 25.301 | 332 | 209 | 10 | 116 | 447 | 64 | 356 | 5.00e-23 | 100 |
| Msa0496460 | AT4G25290.1 | 26.444 | 329 | 177 | 11 | 133 | 453 | 402 | 673 | 4.84e-18 | 88.2 |
Find 127 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATCTTTCACTAAATTTA+AGG | 0.072939 | 3_4:-27252808 | Msa0496460:intron |
| TTGTGTATTCGGTTGATTTA+TGG | 0.184371 | 3_4:-27251866 | Msa0496460:CDS |
| CACTAAAAGACTCAAATTTA+AGG | 0.189165 | 3_4:-27252330 | Msa0496460:CDS |
| TCATAATGAACATTCAATTT+AGG | 0.203184 | 3_4:+27252146 | None:intergenic |
| GAAAAGGGTCATCAACAAAA+TGG | 0.210823 | 3_4:-27252380 | Msa0496460:CDS |
| CTAACTCTCTTTCAATAGTT+TGG | 0.243271 | 3_4:+27249870 | None:intergenic |
| ATCAATAATCTTTACACAAT+TGG | 0.245251 | 3_4:-27252419 | Msa0496460:CDS |
| AGTTATGGTGATTATGTTAT+TGG | 0.253348 | 3_4:-27252296 | Msa0496460:CDS |
| TATGGGGACTTCAGGTTAAA+AGG | 0.267598 | 3_4:-27250461 | Msa0496460:CDS |
| AATGTTTCGCCTTGGGGTTT+TGG | 0.273427 | 3_4:-27251918 | Msa0496460:CDS |
| ATCCTTGGGTGACACCTATA+TGG | 0.274359 | 3_4:-27250479 | Msa0496460:CDS |
| GCGTTAGTTGTTATAATATT+AGG | 0.275628 | 3_4:+27252867 | None:intergenic |
| GAGAAGCAGCTGATGGATTT+AGG | 0.281263 | 3_4:-27252047 | Msa0496460:CDS |
| TGCCTCTAGTGTCTCACTTT+GGG | 0.296121 | 3_4:-27249801 | Msa0496460:CDS |
| GCAGGGCTGATTTGATAATA+AGG | 0.317228 | 3_4:+27250423 | None:intergenic |
| AAAAGTGGATTTATATTTGA+TGG | 0.327721 | 3_4:+27249696 | None:intergenic |
| GTCAGTTTCTTTATATTTGA+AGG | 0.331884 | 3_4:+27251098 | None:intergenic |
| ATTTGATAATAAGGAGCTTC+AGG | 0.341340 | 3_4:+27250432 | None:intergenic |
| CTCAAATTTAAGGTTAATAG+TGG | 0.351895 | 3_4:-27252320 | Msa0496460:CDS |
| GATGAAGGAAGAGATATTGT+AGG | 0.356457 | 3_4:-27252269 | Msa0496460:CDS |
| GAGTGGAAATGTTTCGCCTT+GGG | 0.357128 | 3_4:-27251925 | Msa0496460:CDS |
| GGCGACTGAGCTTGTGTATT+CGG | 0.358843 | 3_4:-27251877 | Msa0496460:CDS |
| AGATCCTGCTCCTTTGTCTA+AGG | 0.359553 | 3_4:-27251964 | Msa0496460:CDS |
| GCTCCTTTGTCTAAGGTAGA+AGG | 0.380700 | 3_4:-27251957 | Msa0496460:CDS |
| CTCTAAACTATTGTATTCCT+TGG | 0.392833 | 3_4:-27252897 | Msa0496460:five_prime_UTR |
| AGAACATAGTTGCTAAGAAA+TGG | 0.393122 | 3_4:-27252567 | Msa0496460:exon |
| GAAATGGAAACTCTTTCATA+TGG | 0.395108 | 3_4:-27252551 | Msa0496460:CDS |
| GCTGAAGGATAATTCTCCTT+GGG | 0.395504 | 3_4:+27250644 | None:intergenic |
| TCAATAATCTTTACACAATT+GGG | 0.398675 | 3_4:-27252418 | Msa0496460:CDS |
| GTCATAAATTTCTTACTTCG+TGG | 0.404663 | 3_4:-27249962 | Msa0496460:CDS |
| TTGCCTCTAGTGTCTCACTT+TGG | 0.408372 | 3_4:-27249802 | Msa0496460:CDS |
| CGCTGAAGGATAATTCTCCT+TGG | 0.410914 | 3_4:+27250643 | None:intergenic |
| GACACCTATATGGGGACTTC+AGG | 0.417003 | 3_4:-27250469 | Msa0496460:CDS |
| GTCATCAACAAAATGGGTTT+AGG | 0.419697 | 3_4:-27252373 | Msa0496460:CDS |
| GCAAATGAGGCTGCAGCAGC+AGG | 0.429355 | 3_4:+27250684 | None:intergenic |
| TTAACCTGAAGTCCCCATAT+AGG | 0.431257 | 3_4:+27250465 | None:intergenic |
| CTCCTTTGTCTAAGGTAGAA+GGG | 0.432227 | 3_4:-27251956 | Msa0496460:CDS |
| TCCTTGGGTGACACCTATAT+GGG | 0.437100 | 3_4:-27250478 | Msa0496460:CDS |
| ATGAAGGAAGAGATATTGTA+GGG | 0.437799 | 3_4:-27252268 | Msa0496460:CDS |
| AACTACCACCTCCTTGGACT+TGG | 0.440929 | 3_4:+27249748 | None:intergenic |
| TGTATGGAAAAGAAGATCCT+TGG | 0.446455 | 3_4:-27250494 | Msa0496460:CDS |
| GATGAATCTAACGGTGAATC+CGG | 0.449227 | 3_4:-27252203 | Msa0496460:CDS |
| TCATGAGGGCAGTGACCAGC+AGG | 0.450163 | 3_4:+27250405 | None:intergenic |
| ATTTATGGCAAGATCAAGTT+CGG | 0.451015 | 3_4:-27251851 | Msa0496460:CDS |
| AAGGTTAATAGTGGAAGTTA+TGG | 0.452518 | 3_4:-27252311 | Msa0496460:CDS |
| TTCTTTATATTTGAAGGTAG+AGG | 0.455798 | 3_4:+27251104 | None:intergenic |
| GGTGAACCAGTCTATATTGT+AGG | 0.458199 | 3_4:-27251287 | Msa0496460:CDS |
| TTTCCATACATGAGGCAAAT+CGG | 0.458829 | 3_4:+27250507 | None:intergenic |
| CGAGTGGAAATGTTTCGCCT+TGG | 0.459293 | 3_4:-27251926 | Msa0496460:CDS |
| GTGCCGATTTGCCTCATGTA+TGG | 0.462283 | 3_4:-27250510 | Msa0496460:CDS |
| TACAATAGTTTAGAGTTGCT+TGG | 0.463091 | 3_4:+27252905 | None:intergenic |
| GTTTGAATTCAACTCAATCA+AGG | 0.466524 | 3_4:-27252475 | Msa0496460:CDS |
| TAAATTTCTTACTTCGTGGA+TGG | 0.469086 | 3_4:-27249958 | Msa0496460:CDS |
| TAAAGATCAAAAGTATGTAT+TGG | 0.469357 | 3_4:+27249581 | None:intergenic |
| AAGCTCAGTCGCCCACGGTT+CGG | 0.472964 | 3_4:+27251887 | None:intergenic |
| AGATTCAACTACCACCTCCT+TGG | 0.474343 | 3_4:+27249742 | None:intergenic |
| AAAAGGGTCATCAACAAAAT+GGG | 0.477906 | 3_4:-27252379 | Msa0496460:CDS |
| GTTACACCTTTCACTAAATG+AGG | 0.478531 | 3_4:+27251218 | None:intergenic |
| GAAAAGACAATGTACAAAAG+TGG | 0.483170 | 3_4:+27249681 | None:intergenic |
| GACTTGCCAAAGTATTTCCA+TGG | 0.484178 | 3_4:-27251139 | Msa0496460:CDS |
| TCCGGCCCATGGAAATACTT+TGG | 0.486998 | 3_4:+27251133 | None:intergenic |
| GGTTGATGTACCTGCTTCAA+AGG | 0.488420 | 3_4:-27252246 | Msa0496460:CDS |
| CCAAATCCAGTAAAATCTCC+TGG | 0.491222 | 3_4:-27251161 | Msa0496460:CDS |
| TATTATCAAATCAGCCCTGC+TGG | 0.491907 | 3_4:-27250420 | Msa0496460:CDS |
| TGAAGGTAGAGGGAATGTTC+CGG | 0.494970 | 3_4:+27251115 | None:intergenic |
| ACAAATTTGTTACAGGTCAT+CGG | 0.503439 | 3_4:-27251308 | Msa0496460:intron |
| CGCAGATCATTCCATAAATG+TGG | 0.503615 | 3_4:-27250745 | Msa0496460:CDS |
| GCCAAAGTATTTCCATGGGC+CGG | 0.503917 | 3_4:-27251134 | Msa0496460:CDS |
| CCTTGATAATGTTTCGCTGA+AGG | 0.506677 | 3_4:+27250629 | None:intergenic |
| GTATGGAAAAGAAGATCCTT+GGG | 0.512378 | 3_4:-27250493 | Msa0496460:CDS |
| TCTTTATATTTGAAGGTAGA+GGG | 0.516316 | 3_4:+27251105 | None:intergenic |
| TATGTTATTGGTGAAGATGA+AGG | 0.519558 | 3_4:-27252284 | Msa0496460:CDS |
| GGAAATACTTTGGCAAGTCC+AGG | 0.521700 | 3_4:+27251143 | None:intergenic |
| AGAGGGAATGTTCCGGCCCA+TGG | 0.525112 | 3_4:+27251122 | None:intergenic |
| AAAGGAGCAGGATCTTCAAA+AGG | 0.528883 | 3_4:+27251972 | None:intergenic |
| TCAATTATGTTTGCTCCCCA+AGG | 0.529087 | 3_4:-27250660 | Msa0496460:CDS |
| AAACATAATTGAAGCAAATG+AGG | 0.531154 | 3_4:+27250671 | None:intergenic |
| CTAGTGTCTCACTTTGGGAC+AGG | 0.531866 | 3_4:-27249796 | Msa0496460:CDS |
| GATTCACCGTTAGATTCATC+CGG | 0.533130 | 3_4:+27252206 | None:intergenic |
| CCTTCAGCGAAACATTATCA+AGG | 0.535892 | 3_4:-27250629 | Msa0496460:intron |
| ATAGAGAGCCATCAGACTCT+AGG | 0.542784 | 3_4:+27249927 | None:intergenic |
| AATGTTCATTATGAGAAAGC+TGG | 0.544928 | 3_4:-27252137 | Msa0496460:CDS |
| TGCTATCCTCATTTAGTGAA+AGG | 0.545914 | 3_4:-27251224 | Msa0496460:CDS |
| TCATTATGAGAAGCAGCTGA+TGG | 0.547861 | 3_4:-27252054 | Msa0496460:CDS |
| AGTGGAAATGTTTCGCCTTG+GGG | 0.549038 | 3_4:-27251924 | Msa0496460:CDS |
| GGGACTTCAGGTTAAAAGGA+AGG | 0.555835 | 3_4:-27250457 | Msa0496460:CDS |
| ACCCCTTCTACCTTAGACAA+AGG | 0.561060 | 3_4:+27251954 | None:intergenic |
| TGCAGCAGCAGGATGTCTTG+TGG | 0.564810 | 3_4:+27250695 | None:intergenic |
| TCCTTTGTCTAAGGTAGAAG+GGG | 0.565381 | 3_4:-27251955 | Msa0496460:CDS |
| AAAATTCTATTCCAAGTCCA+AGG | 0.565946 | 3_4:-27249759 | Msa0496460:CDS |
| GAAAGCTGGTTGTGAAAATG+TGG | 0.570001 | 3_4:-27252123 | Msa0496460:CDS |
| GGAATCAAAACCTTTGAAGC+AGG | 0.573711 | 3_4:+27252236 | None:intergenic |
| AAAGAACCAACACCGAAACC+CGG | 0.578498 | 3_4:+27252077 | None:intergenic |
| AGTGGATTTATATTTGATGG+TGG | 0.578633 | 3_4:+27249699 | None:intergenic |
| TATAAAGAAACTGACAGAGT+TGG | 0.579225 | 3_4:-27251090 | Msa0496460:CDS |
| CTATTCCAAGTCCAAGGAGG+TGG | 0.580393 | 3_4:-27249753 | Msa0496460:CDS |
| TGGAGATGAAACCGAACCGT+GGG | 0.590049 | 3_4:-27251898 | Msa0496460:CDS |
| GAATTGCCTACAATATAGAC+TGG | 0.590145 | 3_4:+27251281 | None:intergenic |
| GTGTCTATTTCTTCAAGCAG+AGG | 0.590583 | 3_4:+27249899 | None:intergenic |
| AGTTCGGTACTTCATTGAAG+AGG | 0.593978 | 3_4:-27251835 | Msa0496460:intron |
| TTAGATTCATCCGGTAAACC+AGG | 0.594608 | 3_4:+27252215 | None:intergenic |
| TCTACCTTAGACAAAGGAGC+AGG | 0.601953 | 3_4:+27251960 | None:intergenic |
| ACCTCAGGGACTTCGTCATG+AGG | 0.613786 | 3_4:+27250390 | None:intergenic |
| CCTCAGGGACTTCGTCATGA+GGG | 0.615846 | 3_4:+27250391 | None:intergenic |
| GTAGAAGGGGTTATGTCGAG+TGG | 0.616320 | 3_4:-27251942 | Msa0496460:CDS |
| ACAACTACTTATCACCGCAC+CGG | 0.616475 | 3_4:+27252184 | None:intergenic |
| ACTTGCCAAAGTATTTCCAT+GGG | 0.623837 | 3_4:-27251138 | Msa0496460:CDS |
| ATTAGAAACCTAGAGTCTGA+TGG | 0.625268 | 3_4:-27249935 | Msa0496460:CDS |
| TAATATTAGGAACAGATCCA+AGG | 0.626290 | 3_4:+27252880 | None:intergenic |
| ATTGTAGGCAATTCACTAGG+AGG | 0.628400 | 3_4:-27251272 | Msa0496460:CDS |
| GTTTCATCTCCAAAACCCCA+AGG | 0.634038 | 3_4:+27251909 | None:intergenic |
| TACACAAGCTCAGTCGCCCA+CGG | 0.634556 | 3_4:+27251882 | None:intergenic |
| CCCCATATAGGTGTCACCCA+AGG | 0.637101 | 3_4:+27250477 | None:intergenic |
| TTGGAGATGAAACCGAACCG+TGG | 0.642794 | 3_4:-27251899 | Msa0496460:CDS |
| GTAGTTGAATCTCAATGAGA+TGG | 0.645518 | 3_4:-27249731 | Msa0496460:exon |
| TATATTGTAGGCAATTCACT+AGG | 0.646604 | 3_4:-27251275 | Msa0496460:CDS |
| GTGTTCATAACTTGACAACA+TGG | 0.649898 | 3_4:+27252521 | None:intergenic |
| CCCTCATGACGAAGTCCCTG+AGG | 0.650741 | 3_4:-27250391 | Msa0496460:intron |
| CTGAAGGATAATTCTCCTTG+GGG | 0.654826 | 3_4:+27250645 | None:intergenic |
| GTCCCAAAGTGAGACACTAG+AGG | 0.660707 | 3_4:+27249799 | None:intergenic |
| TGAAGGAAGAGATATTGTAG+GGG | 0.662501 | 3_4:-27252267 | Msa0496460:CDS |
| GGTTTACCGGATGAATCTAA+CGG | 0.662912 | 3_4:-27252212 | Msa0496460:CDS |
| CATGAGGGCAGTGACCAGCA+GGG | 0.666303 | 3_4:+27250406 | None:intergenic |
| CACTAAATGAGGATAGCATG+CGG | 0.675326 | 3_4:+27251229 | None:intergenic |
| CCTTGGGTGACACCTATATG+GGG | 0.695951 | 3_4:-27250477 | Msa0496460:CDS |
| ATTCTATTCCAAGTCCAAGG+AGG | 0.718477 | 3_4:-27249756 | Msa0496460:CDS |
| ATCTAACGGTGAATCCGGTG+CGG | 0.719969 | 3_4:-27252198 | Msa0496460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCTTATATTAGAAAAAA+TGG | - | chr3_4:27249996-27250015 | Msa0496460:intron | 10.0% |
| !! | TCTAAAAAAGAAAATTCATT+TGG | - | chr3_4:27250785-27250804 | Msa0496460:CDS | 15.0% |
| !!! | TTATTATACAAATTTGTTAC+AGG | - | chr3_4:27251133-27251152 | Msa0496460:CDS | 15.0% |
| !! | TTCATCTTTCACTAAATTTA+AGG | - | chr3_4:27249640-27249659 | Msa0496460:three_prime_UTR | 20.0% |
| !! | ATTAAACATGAACATGTTTA+TGG | + | chr3_4:27249674-27249693 | None:intergenic | 20.0% |
| !! | TCTTATATTAGAAAAAATGG+AGG | - | chr3_4:27249999-27250018 | Msa0496460:intron | 20.0% |
| !! | ATCAATAATCTTTACACAAT+TGG | - | chr3_4:27250029-27250048 | Msa0496460:intron | 20.0% |
| !! | TCAATAATCTTTACACAATT+GGG | - | chr3_4:27250030-27250049 | Msa0496460:intron | 20.0% |
| !!! | TCATTGAGATTTTATGAAAA+GGG | - | chr3_4:27250053-27250072 | Msa0496460:intron | 20.0% |
| !! | TCATAATGAACATTCAATTT+AGG | + | chr3_4:27250305-27250324 | None:intergenic | 20.0% |
| !!! | AAAAAAATCTAAAACCACAT+AGG | + | chr3_4:27250741-27250760 | None:intergenic | 20.0% |
| !! | CTAAAATACTAAATCATATC+AGG | + | chr3_4:27251432-27251451 | None:intergenic | 20.0% |
| !! | AAATTGAATAGATGTGATAA+GGG | + | chr3_4:27251598-27251617 | None:intergenic | 20.0% |
| !! | AAAATTGAATAGATGTGATA+AGG | + | chr3_4:27251599-27251618 | None:intergenic | 20.0% |
| !! | GAAACAAATTAATAAGAATC+AGG | + | chr3_4:27251623-27251642 | None:intergenic | 20.0% |
| !!! | CTTATTAATTTGTTTCCTAT+AGG | - | chr3_4:27251627-27251646 | Msa0496460:intron | 20.0% |
| !!! | CTTATATGATCTTAGAATTT+TGG | + | chr3_4:27252254-27252273 | None:intergenic | 20.0% |
| !!! | ATCCAATTTTATTTATTTGC+AGG | - | chr3_4:27252464-27252483 | Msa0496460:CDS | 20.0% |
| !!! | GATTTTTTTGAACTTTTTCT+TGG | + | chr3_4:27252609-27252628 | None:intergenic | 20.0% |
| !!! | AAAAGTGGATTTATATTTGA+TGG | + | chr3_4:27252755-27252774 | None:intergenic | 20.0% |
| !!! | GATTCTAAAAAAATTGTGTA+TGG | + | chr3_4:27252810-27252829 | None:intergenic | 20.0% |
| !!! | TAAAGATCAAAAGTATGTAT+TGG | + | chr3_4:27252870-27252889 | None:intergenic | 20.0% |
| !!! | ATATATTAGTCGGTTTTTCT+TGG | - | chr3_4:27249498-27249517 | Msa0496460:three_prime_UTR | 25.0% |
| ! | GCGTTAGTTGTTATAATATT+AGG | + | chr3_4:27249584-27249603 | None:intergenic | 25.0% |
| !! | GTCATTGAGATTTTATGAAA+AGG | - | chr3_4:27250052-27250071 | Msa0496460:intron | 25.0% |
| ! | CACTAAAAGACTCAAATTTA+AGG | - | chr3_4:27250118-27250137 | Msa0496460:intron | 25.0% |
| !! | CTCAAATTTAAGGTTAATAG+TGG | - | chr3_4:27250128-27250147 | Msa0496460:intron | 25.0% |
| ! | AGTTATGGTGATTATGTTAT+TGG | - | chr3_4:27250152-27250171 | Msa0496460:intron | 25.0% |
| !!! | GTGATAAGTAGTTGTTTTAA+GGG | - | chr3_4:27250272-27250291 | Msa0496460:intron | 25.0% |
| !!! | ACCAAATGTTTTATTTTTGC+CGG | - | chr3_4:27250352-27250371 | Msa0496460:intron | 25.0% |
| ! | TATACTATTTGAGCAAACAA+TGG | + | chr3_4:27250687-27250706 | None:intergenic | 25.0% |
| !!! | TTTTTTCTAACAACTTATGC+TGG | - | chr3_4:27250755-27250774 | Msa0496460:CDS | 25.0% |
| ! | TCTTTATATTTGAAGGTAGA+GGG | + | chr3_4:27251346-27251365 | None:intergenic | 25.0% |
| ! | TTCTTTATATTTGAAGGTAG+AGG | + | chr3_4:27251347-27251366 | None:intergenic | 25.0% |
| ! | GTCAGTTTCTTTATATTTGA+AGG | + | chr3_4:27251353-27251372 | None:intergenic | 25.0% |
| ! | TTTAGTTGCAAACTTCTAAT+TGG | - | chr3_4:27251447-27251466 | Msa0496460:intron | 25.0% |
| ! | TAATGGAATAGATGTGATAA+GGG | + | chr3_4:27251573-27251592 | None:intergenic | 25.0% |
| ! | TTAATGGAATAGATGTGATA+AGG | + | chr3_4:27251574-27251593 | None:intergenic | 25.0% |
| !!! | ATTAATTTGTTTCCTATAGG+TGG | - | chr3_4:27251630-27251649 | Msa0496460:intron | 25.0% |
| !!! | TTAATTTGTTTCCTATAGGT+GGG | - | chr3_4:27251631-27251650 | Msa0496460:intron | 25.0% |
| ! | AAAAACGTTATCCACATTTA+TGG | + | chr3_4:27251717-27251736 | None:intergenic | 25.0% |
| ! | AAACATAATTGAAGCAAATG+AGG | + | chr3_4:27251780-27251799 | None:intergenic | 25.0% |
| ! | CAATTGCTAACTAATTAACT+TGG | - | chr3_4:27252084-27252103 | Msa0496460:CDS | 25.0% |
| !!! | ATGATCTTAGAATTTTGGTT+GGG | + | chr3_4:27252249-27252268 | None:intergenic | 25.0% |
| !!! | TATGATCTTAGAATTTTGGT+TGG | + | chr3_4:27252250-27252269 | None:intergenic | 25.0% |
| ! | TCATAAAGAACTAAACAATG+AGG | + | chr3_4:27252421-27252440 | None:intergenic | 25.0% |
| ! | GACCTGCAAATAAATAAAAT+TGG | + | chr3_4:27252469-27252488 | None:intergenic | 25.0% |
| ! | TACAATAGTTTAGAGTTGCT+TGG | + | chr3_4:27249546-27249565 | None:intergenic | 30.0% |
| CTCTAAACTATTGTATTCCT+TGG | - | chr3_4:27249551-27249570 | Msa0496460:three_prime_UTR | 30.0% | |
| TAATATTAGGAACAGATCCA+AGG | + | chr3_4:27249571-27249590 | None:intergenic | 30.0% | |
| ! | ACTGAATGATTTTCTGTTGT+TGG | - | chr3_4:27249851-27249870 | Msa0496460:CDS | 30.0% |
| AGAACATAGTTGCTAAGAAA+TGG | - | chr3_4:27249881-27249900 | Msa0496460:CDS | 30.0% | |
| GAAATGGAAACTCTTTCATA+TGG | - | chr3_4:27249897-27249916 | Msa0496460:CDS | 30.0% | |
| GTTTGAATTCAACTCAATCA+AGG | - | chr3_4:27249973-27249992 | Msa0496460:intron | 30.0% | |
| AAAAGGGTCATCAACAAAAT+GGG | - | chr3_4:27250069-27250088 | Msa0496460:intron | 30.0% | |
| ! | AAGGTTAATAGTGGAAGTTA+TGG | - | chr3_4:27250137-27250156 | Msa0496460:intron | 30.0% |
| TATGTTATTGGTGAAGATGA+AGG | - | chr3_4:27250164-27250183 | Msa0496460:intron | 30.0% | |
| ATGAAGGAAGAGATATTGTA+GGG | - | chr3_4:27250180-27250199 | Msa0496460:intron | 30.0% | |
| !! | GGTGATAAGTAGTTGTTTTA+AGG | - | chr3_4:27250271-27250290 | Msa0496460:intron | 30.0% |
| !!! | TAAGTAGTTGTTTTAAGGGA+TGG | - | chr3_4:27250276-27250295 | Msa0496460:intron | 30.0% |
| AATGTTCATTATGAGAAAGC+TGG | - | chr3_4:27250311-27250330 | Msa0496460:intron | 30.0% | |
| !!! | CCAAATGTTTTATTTTTGCC+GGG | - | chr3_4:27250353-27250372 | Msa0496460:intron | 30.0% |
| ! | TTGTGTATTCGGTTGATTTA+TGG | - | chr3_4:27250582-27250601 | Msa0496460:intron | 30.0% |
| ATTTATGGCAAGATCAAGTT+CGG | - | chr3_4:27250597-27250616 | Msa0496460:intron | 30.0% | |
| ! | GGTAAATAACTTGCATTGTT+TGG | - | chr3_4:27250634-27250653 | Msa0496460:CDS | 30.0% |
| TGTTTGCTCAAATAGTATAC+TGG | - | chr3_4:27250688-27250707 | Msa0496460:CDS | 30.0% | |
| AGTATACTGGAAAATGTTCT+TGG | - | chr3_4:27250701-27250720 | Msa0496460:CDS | 30.0% | |
| ! | TCAAATAAGTCGATTCAAAC+AGG | + | chr3_4:27250811-27250830 | None:intergenic | 30.0% |
| CCTAAAGAGCTTATTGAAAT+AGG | + | chr3_4:27250919-27250938 | None:intergenic | 30.0% | |
| CCTATTTCAATAAGCTCTTT+AGG | - | chr3_4:27250916-27250935 | Msa0496460:intron | 30.0% | |
| !! | ACAAATTTGTTACAGGTCAT+CGG | - | chr3_4:27251140-27251159 | Msa0496460:CDS | 30.0% |
| TATATTGTAGGCAATTCACT+AGG | - | chr3_4:27251173-27251192 | Msa0496460:CDS | 30.0% | |
| TATAAAGAAACTGACAGAGT+TGG | - | chr3_4:27251358-27251377 | Msa0496460:intron | 30.0% | |
| AATGGAATAGATGTGATAAG+GGG | + | chr3_4:27251572-27251591 | None:intergenic | 30.0% | |
| TAGATGTGATAAGGGTTTAA+TGG | + | chr3_4:27251590-27251609 | None:intergenic | 30.0% | |
| ! | AGTACATCAGCAATACTTTT+CGG | + | chr3_4:27251671-27251690 | None:intergenic | 30.0% |
| TACGTGAATACACATGTTAA+TGG | - | chr3_4:27251876-27251895 | Msa0496460:CDS | 30.0% | |
| ! | ACACATGTTAATGGTTTTTG+CGG | - | chr3_4:27251885-27251904 | Msa0496460:CDS | 30.0% |
| ! | ATTTGATAATAAGGAGCTTC+AGG | + | chr3_4:27252019-27252038 | None:intergenic | 30.0% |
| ! | ACCTTACAAGCTAATTTTGT+AGG | - | chr3_4:27252204-27252223 | Msa0496460:CDS | 30.0% |
| ! | CCTTACAAGCTAATTTTGTA+GGG | - | chr3_4:27252205-27252224 | Msa0496460:CDS | 30.0% |
| TAAATATTCAGTGCGCAAAA+AGG | + | chr3_4:27252334-27252353 | None:intergenic | 30.0% | |
| AAAGAACTAAACAATGAGGA+AGG | + | chr3_4:27252417-27252436 | None:intergenic | 30.0% | |
| GTCATAAATTTCTTACTTCG+TGG | - | chr3_4:27252486-27252505 | Msa0496460:CDS | 30.0% | |
| TAAATTTCTTACTTCGTGGA+TGG | - | chr3_4:27252490-27252509 | Msa0496460:CDS | 30.0% | |
| CTAACTCTCTTTCAATAGTT+TGG | + | chr3_4:27252581-27252600 | None:intergenic | 30.0% | |
| ! | TGGACTTGGAATAGAATTTT+AGG | + | chr3_4:27252689-27252708 | None:intergenic | 30.0% |
| AAAATTCTATTCCAAGTCCA+AGG | - | chr3_4:27252689-27252708 | Msa0496460:intron | 30.0% | |
| ! | AGTGGATTTATATTTGATGG+TGG | + | chr3_4:27252752-27252771 | None:intergenic | 30.0% |
| GAAAAGACAATGTACAAAAG+TGG | + | chr3_4:27252770-27252789 | None:intergenic | 30.0% | |
| GTGTTCATAACTTGACAACA+TGG | + | chr3_4:27249930-27249949 | None:intergenic | 35.0% | |
| GAAAAGGGTCATCAACAAAA+TGG | - | chr3_4:27250068-27250087 | Msa0496460:intron | 35.0% | |
| ! | GTCATCAACAAAATGGGTTT+AGG | - | chr3_4:27250075-27250094 | Msa0496460:intron | 35.0% |
| !! | AGGTCACAAAGTGTTTTTGA+AGG | - | chr3_4:27250095-27250114 | Msa0496460:intron | 35.0% |
| GATGAAGGAAGAGATATTGT+AGG | - | chr3_4:27250179-27250198 | Msa0496460:intron | 35.0% | |
| TGAAGGAAGAGATATTGTAG+GGG | - | chr3_4:27250181-27250200 | Msa0496460:intron | 35.0% | |
| CCCGGCAAAAATAAAACATT+TGG | + | chr3_4:27250356-27250375 | None:intergenic | 35.0% | |
| !!! | GTTTTATTTTTGCCGGGTTT+CGG | - | chr3_4:27250359-27250378 | Msa0496460:intron | 35.0% |
| ! | CAAATTTGCTTGTTCCTATG+TGG | - | chr3_4:27250724-27250743 | Msa0496460:CDS | 35.0% |
| ! | TTAAGTTGCGTATCCAAACA+AGG | - | chr3_4:27251003-27251022 | Msa0496460:intron | 35.0% |
| ! | AATCATCAGCACTCTTTTGA+AGG | - | chr3_4:27251082-27251101 | Msa0496460:intron | 35.0% |
| GAATTGCCTACAATATAGAC+TGG | + | chr3_4:27251170-27251189 | None:intergenic | 35.0% | |
| TGCTATCCTCATTTAGTGAA+AGG | - | chr3_4:27251224-27251243 | Msa0496460:CDS | 35.0% | |
| GTTACACCTTTCACTAAATG+AGG | + | chr3_4:27251233-27251252 | None:intergenic | 35.0% | |
| ! | TGCTTAATGCAACACCTTTT+TGG | - | chr3_4:27251255-27251274 | Msa0496460:CDS | 35.0% |
| ! | GCTTAATGCAACACCTTTTT+GGG | - | chr3_4:27251256-27251275 | Msa0496460:CDS | 35.0% |
| ! | CTTAATGCAACACCTTTTTG+GGG | - | chr3_4:27251257-27251276 | Msa0496460:CDS | 35.0% |
| ! | TTAATGCAACACCTTTTTGG+GGG | - | chr3_4:27251258-27251277 | Msa0496460:CDS | 35.0% |
| ! | ACTTGCCAAAGTATTTCCAT+GGG | - | chr3_4:27251310-27251329 | Msa0496460:intron | 35.0% |
| TCGCAAATGAATGACTACAT+CGG | + | chr3_4:27251491-27251510 | None:intergenic | 35.0% | |
| ! | ACTAATTTTCTCCCACCTAT+AGG | + | chr3_4:27251645-27251664 | None:intergenic | 35.0% |
| TTTCCATACATGAGGCAAAT+CGG | + | chr3_4:27251944-27251963 | None:intergenic | 35.0% | |
| ! | GATCTTCTTTTCCATACATG+AGG | + | chr3_4:27251952-27251971 | None:intergenic | 35.0% |
| TGTATGGAAAAGAAGATCCT+TGG | - | chr3_4:27251954-27251973 | Msa0496460:CDS | 35.0% | |
| GTATGGAAAAGAAGATCCTT+GGG | - | chr3_4:27251955-27251974 | Msa0496460:CDS | 35.0% | |
| ATATGTTAAGAGCTGCACAT+TGG | - | chr3_4:27252133-27252152 | Msa0496460:CDS | 35.0% | |
| ! | TGCACATTGGATTTGAGATA+GGG | - | chr3_4:27252146-27252165 | Msa0496460:CDS | 35.0% |
| CAACTTATAAACTCACATCC+AGG | + | chr3_4:27252172-27252191 | None:intergenic | 35.0% | |
| CTGGATGTGAGTTTATAAGT+TGG | - | chr3_4:27252170-27252189 | Msa0496460:CDS | 35.0% | |
| !! | CCCTACAAAATTAGCTTGTA+AGG | + | chr3_4:27252208-27252227 | None:intergenic | 35.0% |
| ! | TTTTGTAGGGTTGAGTTAAG+CGG | - | chr3_4:27252218-27252237 | Msa0496460:CDS | 35.0% |
| AATGAGGAAGGAATAACATG+AGG | + | chr3_4:27252405-27252424 | None:intergenic | 35.0% | |
| ATTAGAAACCTAGAGTCTGA+TGG | - | chr3_4:27252513-27252532 | Msa0496460:CDS | 35.0% | |
| GTAGTTGAATCTCAATGAGA+TGG | - | chr3_4:27252717-27252736 | Msa0496460:intron | 35.0% | |
| !! | GGAATCAAAACCTTTGAAGC+AGG | + | chr3_4:27250215-27250234 | None:intergenic | 40.0% |
| !!! | GCTTCAAAGGTTTTGATTCC+TGG | - | chr3_4:27250215-27250234 | Msa0496460:intron | 40.0% |
| !!! | GGTTTTGATTCCTGGTTTAC+CGG | - | chr3_4:27250223-27250242 | Msa0496460:intron | 40.0% |
| TTAGATTCATCCGGTAAACC+AGG | + | chr3_4:27250236-27250255 | None:intergenic | 40.0% | |
| GGTTTACCGGATGAATCTAA+CGG | - | chr3_4:27250236-27250255 | Msa0496460:intron | 40.0% | |
| GATTCACCGTTAGATTCATC+CGG | + | chr3_4:27250245-27250264 | None:intergenic | 40.0% | |
| GATGAATCTAACGGTGAATC+CGG | - | chr3_4:27250245-27250264 | Msa0496460:intron | 40.0% | |
| GAAAGCTGGTTGTGAAAATG+TGG | - | chr3_4:27250325-27250344 | Msa0496460:intron | 40.0% | |
| TCATTATGAGAAGCAGCTGA+TGG | - | chr3_4:27250394-27250413 | Msa0496460:CDS | 40.0% | |
| ! | TAGGTCGTGATTTTCGTGTT+TGG | - | chr3_4:27250420-27250439 | Msa0496460:CDS | 40.0% |
| ! | AGGTCGTGATTTTCGTGTTT+GGG | - | chr3_4:27250421-27250440 | Msa0496460:CDS | 40.0% |
| !!! | GTTTGGGCGTTGGATTTTTT+AGG | - | chr3_4:27250437-27250456 | Msa0496460:CDS | 40.0% |
| !!! | GCGTTGGATTTTTTAGGACA+AGG | - | chr3_4:27250443-27250462 | Msa0496460:CDS | 40.0% |
| AAAGGAGCAGGATCTTCAAA+AGG | + | chr3_4:27250479-27250498 | None:intergenic | 40.0% | |
| ! | CTCCTTTGTCTAAGGTAGAA+GGG | - | chr3_4:27250492-27250511 | Msa0496460:CDS | 40.0% |
| ! | TCCTTTGTCTAAGGTAGAAG+GGG | - | chr3_4:27250493-27250512 | Msa0496460:CDS | 40.0% |
| AGTTCGGTACTTCATTGAAG+AGG | - | chr3_4:27250613-27250632 | Msa0496460:intron | 40.0% | |
| TTGCGTATCCAAACAAGGTT+AGG | - | chr3_4:27251008-27251027 | Msa0496460:intron | 40.0% | |
| GGTGAACCAGTCTATATTGT+AGG | - | chr3_4:27251161-27251180 | Msa0496460:CDS | 40.0% | |
| ATTGTAGGCAATTCACTAGG+AGG | - | chr3_4:27251176-27251195 | Msa0496460:CDS | 40.0% | |
| CACTAAATGAGGATAGCATG+CGG | + | chr3_4:27251222-27251241 | None:intergenic | 40.0% | |
| ! | CCAGGAGATTTTACTGGATT+TGG | + | chr3_4:27251290-27251309 | None:intergenic | 40.0% |
| CCAAATCCAGTAAAATCTCC+TGG | - | chr3_4:27251287-27251306 | Msa0496460:CDS | 40.0% | |
| ! | GACTTGCCAAAGTATTTCCA+TGG | - | chr3_4:27251309-27251328 | Msa0496460:intron | 40.0% |
| !! | TGACAGAGTTGGTGTAAGTA+TGG | - | chr3_4:27251369-27251388 | Msa0496460:intron | 40.0% |
| CGCAGATCATTCCATAAATG+TGG | - | chr3_4:27251703-27251722 | Msa0496460:intron | 40.0% | |
| TCAATTATGTTTGCTCCCCA+AGG | - | chr3_4:27251788-27251807 | Msa0496460:intron | 40.0% | |
| CTGAAGGATAATTCTCCTTG+GGG | + | chr3_4:27251806-27251825 | None:intergenic | 40.0% | |
| GCTGAAGGATAATTCTCCTT+GGG | + | chr3_4:27251807-27251826 | None:intergenic | 40.0% | |
| !! | CCTTGATAATGTTTCGCTGA+AGG | + | chr3_4:27251822-27251841 | None:intergenic | 40.0% |
| CCTTCAGCGAAACATTATCA+AGG | - | chr3_4:27251819-27251838 | Msa0496460:intron | 40.0% | |
| ! | TTTTAGATGTCGAGCGAACA+AGG | - | chr3_4:27251916-27251935 | Msa0496460:CDS | 40.0% |
| TTAACCTGAAGTCCCCATAT+AGG | + | chr3_4:27251986-27252005 | None:intergenic | 40.0% | |
| ! | TATGGGGACTTCAGGTTAAA+AGG | - | chr3_4:27251987-27252006 | Msa0496460:CDS | 40.0% |
| !! | GCAGGGCTGATTTGATAATA+AGG | + | chr3_4:27252028-27252047 | None:intergenic | 40.0% |
| TATTATCAAATCAGCCCTGC+TGG | - | chr3_4:27252028-27252047 | Msa0496460:CDS | 40.0% | |
| GTTAGCAATTGCATACCTCA+GGG | + | chr3_4:27252075-27252094 | None:intergenic | 40.0% | |
| AGTTAGCAATTGCATACCTC+AGG | + | chr3_4:27252076-27252095 | None:intergenic | 40.0% | |
| ! | CTGCACATTGGATTTGAGAT+AGG | - | chr3_4:27252145-27252164 | Msa0496460:CDS | 40.0% |
| AAAAGGAAATGCCGGATAGT+TGG | + | chr3_4:27252317-27252336 | None:intergenic | 40.0% | |
| ! | GTGTCTATTTCTTCAAGCAG+AGG | + | chr3_4:27252552-27252571 | None:intergenic | 40.0% |
| ATTCTATTCCAAGTCCAAGG+AGG | - | chr3_4:27252692-27252711 | Msa0496460:intron | 40.0% | |
| !! | CGGTTTTTCTTGGCTCTTAG+AGG | - | chr3_4:27249508-27249527 | Msa0496460:three_prime_UTR | 45.0% |
| ! | GGTTGATGTACCTGCTTCAA+AGG | - | chr3_4:27250202-27250221 | Msa0496460:intron | 45.0% |
| ACAACTACTTATCACCGCAC+CGG | + | chr3_4:27250267-27250286 | None:intergenic | 45.0% | |
| AAAGAACCAACACCGAAACC+CGG | + | chr3_4:27250374-27250393 | None:intergenic | 45.0% | |
| !! | GAGAAGCAGCTGATGGATTT+AGG | - | chr3_4:27250401-27250420 | Msa0496460:CDS | 45.0% |
| ! | TGATTTTCGTGTTTGGGCGT+TGG | - | chr3_4:27250427-27250446 | Msa0496460:CDS | 45.0% |
| AGATCCTGCTCCTTTGTCTA+AGG | - | chr3_4:27250484-27250503 | Msa0496460:CDS | 45.0% | |
| TCTACCTTAGACAAAGGAGC+AGG | + | chr3_4:27250491-27250510 | None:intergenic | 45.0% | |
| ! | GCTCCTTTGTCTAAGGTAGA+AGG | - | chr3_4:27250491-27250510 | Msa0496460:CDS | 45.0% |
| ACCCCTTCTACCTTAGACAA+AGG | + | chr3_4:27250497-27250516 | None:intergenic | 45.0% | |
| GAGTGGAAATGTTTCGCCTT+GGG | - | chr3_4:27250523-27250542 | Msa0496460:CDS | 45.0% | |
| AGTGGAAATGTTTCGCCTTG+GGG | - | chr3_4:27250524-27250543 | Msa0496460:CDS | 45.0% | |
| ! | AATGTTTCGCCTTGGGGTTT+TGG | - | chr3_4:27250530-27250549 | Msa0496460:intron | 45.0% |
| GTTTCATCTCCAAAACCCCA+AGG | + | chr3_4:27250542-27250561 | None:intergenic | 45.0% | |
| TGTCCACTAGCATAAGCACT+TGG | - | chr3_4:27250834-27250853 | Msa0496460:intron | 45.0% | |
| GTCCACTAGCATAAGCACTT+GGG | - | chr3_4:27250835-27250854 | Msa0496460:intron | 45.0% | |
| TAAGCACTTGGGAGACTGTT+TGG | - | chr3_4:27250846-27250865 | Msa0496460:intron | 45.0% | |
| AAGCACTTGGGAGACTGTTT+GGG | - | chr3_4:27250847-27250866 | Msa0496460:intron | 45.0% | |
| TCCAAACAAGGTTAGGTCAG+TGG | - | chr3_4:27251015-27251034 | Msa0496460:intron | 45.0% | |
| TCCACTGACCTAACCTTGTT+TGG | + | chr3_4:27251019-27251038 | None:intergenic | 45.0% | |
| TTTGGCAGAAACCCCCAAAA+AGG | + | chr3_4:27251272-27251291 | None:intergenic | 45.0% | |
| ! | GCAAGTCCAGGAGATTTTAC+TGG | + | chr3_4:27251296-27251315 | None:intergenic | 45.0% |
| GGAAATACTTTGGCAAGTCC+AGG | + | chr3_4:27251308-27251327 | None:intergenic | 45.0% | |
| TGAAGGTAGAGGGAATGTTC+CGG | + | chr3_4:27251336-27251355 | None:intergenic | 45.0% | |
| TAGATGTGATAAGGGGATCC+TGG | + | chr3_4:27251565-27251584 | None:intergenic | 45.0% | |
| CGCTGAAGGATAATTCTCCT+TGG | + | chr3_4:27251808-27251827 | None:intergenic | 45.0% | |
| ATCCTTGGGTGACACCTATA+TGG | - | chr3_4:27251969-27251988 | Msa0496460:CDS | 45.0% | |
| TCCTTGGGTGACACCTATAT+GGG | - | chr3_4:27251970-27251989 | Msa0496460:CDS | 45.0% | |
| ! | GGGACTTCAGGTTAAAAGGA+AGG | - | chr3_4:27251991-27252010 | Msa0496460:CDS | 45.0% |
| ! | ATTGGATTTGAGATAGGGCC+TGG | - | chr3_4:27252151-27252170 | Msa0496460:CDS | 45.0% |
| AGAGTGTATCCAAGATCCGT+TGG | - | chr3_4:27252272-27252291 | Msa0496460:CDS | 45.0% | |
| GAGTGTATCCAAGATCCGTT+GGG | - | chr3_4:27252273-27252292 | Msa0496460:CDS | 45.0% | |
| !! | ATAGTTGGTGACCCAATAGC+AGG | + | chr3_4:27252302-27252321 | None:intergenic | 45.0% |
| CTATTGGGTCACCAACTATC+CGG | - | chr3_4:27252303-27252322 | Msa0496460:CDS | 45.0% | |
| AGTGCGCAAAAAGGAAATGC+CGG | + | chr3_4:27252325-27252344 | None:intergenic | 45.0% | |
| ATAGAGAGCCATCAGACTCT+AGG | + | chr3_4:27252524-27252543 | None:intergenic | 45.0% | |
| TTGCCTCTAGTGTCTCACTT+TGG | - | chr3_4:27252646-27252665 | Msa0496460:intron | 45.0% | |
| TGCCTCTAGTGTCTCACTTT+GGG | - | chr3_4:27252647-27252666 | Msa0496460:intron | 45.0% | |
| AGATTCAACTACCACCTCCT+TGG | + | chr3_4:27252709-27252728 | None:intergenic | 45.0% | |
| ATCTAACGGTGAATCCGGTG+CGG | - | chr3_4:27250250-27250269 | Msa0496460:intron | 50.0% | |
| !! | TTTTTGCCGGGTTTCGGTGT+TGG | - | chr3_4:27250365-27250384 | Msa0496460:intron | 50.0% |
| GTAGAAGGGGTTATGTCGAG+TGG | - | chr3_4:27250506-27250525 | Msa0496460:CDS | 50.0% | |
| CGAGTGGAAATGTTTCGCCT+TGG | - | chr3_4:27250522-27250541 | Msa0496460:CDS | 50.0% | |
| TTGGAGATGAAACCGAACCG+TGG | - | chr3_4:27250549-27250568 | Msa0496460:intron | 50.0% | |
| TGGAGATGAAACCGAACCGT+GGG | - | chr3_4:27250550-27250569 | Msa0496460:intron | 50.0% | |
| GGCGACTGAGCTTGTGTATT+CGG | - | chr3_4:27250571-27250590 | Msa0496460:intron | 50.0% | |
| CTCCCAAGTGCTTATGCTAG+TGG | + | chr3_4:27250840-27250859 | None:intergenic | 50.0% | |
| ! | GCCAAAGTATTTCCATGGGC+CGG | - | chr3_4:27251314-27251333 | Msa0496460:intron | 50.0% |
| TCCGGCCCATGGAAATACTT+TGG | + | chr3_4:27251318-27251337 | None:intergenic | 50.0% | |
| ACTGCTGATAGTACACCTCC+AGG | - | chr3_4:27251544-27251563 | Msa0496460:intron | 50.0% | |
| ATGTGATAAGGGGATCCTGG+AGG | + | chr3_4:27251562-27251581 | None:intergenic | 50.0% | |
| !! | GTGCCGATTTGCCTCATGTA+TGG | - | chr3_4:27251938-27251957 | Msa0496460:CDS | 50.0% |
| CCTTGGGTGACACCTATATG+GGG | - | chr3_4:27251971-27251990 | Msa0496460:CDS | 50.0% | |
| GACACCTATATGGGGACTTC+AGG | - | chr3_4:27251979-27251998 | Msa0496460:CDS | 50.0% | |
| GTCCCAAAGTGAGACACTAG+AGG | + | chr3_4:27252652-27252671 | None:intergenic | 50.0% | |
| !! | CTAGTGTCTCACTTTGGGAC+AGG | - | chr3_4:27252652-27252671 | Msa0496460:intron | 50.0% |
| CTATTCCAAGTCCAAGGAGG+TGG | - | chr3_4:27252695-27252714 | Msa0496460:intron | 50.0% | |
| AACTACCACCTCCTTGGACT+TGG | + | chr3_4:27252703-27252722 | None:intergenic | 50.0% | |
| TACACAAGCTCAGTCGCCCA+CGG | + | chr3_4:27250569-27250588 | None:intergenic | 55.0% | |
| TGCAGCAGCAGGATGTCTTG+TGG | + | chr3_4:27251756-27251775 | None:intergenic | 55.0% | |
| ! | CCCCATATAGGTGTCACCCA+AGG | + | chr3_4:27251974-27251993 | None:intergenic | 55.0% |
| CCTCAGGGACTTCGTCATGA+GGG | + | chr3_4:27252060-27252079 | None:intergenic | 55.0% | |
| ACCTCAGGGACTTCGTCATG+AGG | + | chr3_4:27252061-27252080 | None:intergenic | 55.0% | |
| !! | GTTGGTGACCCAATAGCAGG+TGG | + | chr3_4:27252299-27252318 | None:intergenic | 55.0% |
| AAGCTCAGTCGCCCACGGTT+CGG | + | chr3_4:27250564-27250583 | None:intergenic | 60.0% | |
| AGAGGGAATGTTCCGGCCCA+TGG | + | chr3_4:27251329-27251348 | None:intergenic | 60.0% | |
| GCAAATGAGGCTGCAGCAGC+AGG | + | chr3_4:27251767-27251786 | None:intergenic | 60.0% | |
| CATGAGGGCAGTGACCAGCA+GGG | + | chr3_4:27252045-27252064 | None:intergenic | 60.0% | |
| TCATGAGGGCAGTGACCAGC+AGG | + | chr3_4:27252046-27252065 | None:intergenic | 60.0% | |
| CCCTCATGACGAAGTCCCTG+AGG | - | chr3_4:27252057-27252076 | Msa0496460:CDS | 60.0% | |
| TCCGTTGGGCCACCTGCTAT+TGG | - | chr3_4:27252287-27252306 | Msa0496460:CDS | 60.0% | |
| CCCAATAGCAGGTGGCCCAA+CGG | + | chr3_4:27252291-27252310 | None:intergenic | 60.0% | |
| CCGTTGGGCCACCTGCTATT+GGG | - | chr3_4:27252288-27252307 | Msa0496460:CDS | 60.0% | |
| GCAGGTGGCCCAACGGATCT+TGG | + | chr3_4:27252284-27252303 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 27249495 | 27252975 | 27249495 | ID=Msa0496460;Name=Msa0496460 |
| chr3_4 | mRNA | 27249495 | 27252975 | 27249495 | ID=Msa0496460-mRNA-1;Parent=Msa0496460;Name=Msa0496460-mRNA-1;_AED=0.31;_eAED=0.31;_QI=164|1|1|1|0.66|0.57|7|241|519 |
| chr3_4 | exon | 27249495 | 27249984 | 27249495 | ID=Msa0496460-mRNA-1:exon:6478;Parent=Msa0496460-mRNA-1 |
| chr3_4 | exon | 27250392 | 27250548 | 27250392 | ID=Msa0496460-mRNA-1:exon:6477;Parent=Msa0496460-mRNA-1 |
| chr3_4 | exon | 27250630 | 27250821 | 27250630 | ID=Msa0496460-mRNA-1:exon:6476;Parent=Msa0496460-mRNA-1 |
| chr3_4 | exon | 27251089 | 27251315 | 27251089 | ID=Msa0496460-mRNA-1:exon:6475;Parent=Msa0496460-mRNA-1 |
| chr3_4 | exon | 27251836 | 27252587 | 27251836 | ID=Msa0496460-mRNA-1:exon:6474;Parent=Msa0496460-mRNA-1 |
| chr3_4 | exon | 27252809 | 27252840 | 27252809 | ID=Msa0496460-mRNA-1:exon:6473;Parent=Msa0496460-mRNA-1 |
| chr3_4 | exon | 27252861 | 27252975 | 27252861 | ID=Msa0496460-mRNA-1:exon:6472;Parent=Msa0496460-mRNA-1 |
| chr3_4 | five_prime_UTR | 27252861 | 27252975 | 27252861 | ID=Msa0496460-mRNA-1:five_prime_utr;Parent=Msa0496460-mRNA-1 |
| chr3_4 | five_prime_UTR | 27252809 | 27252840 | 27252809 | ID=Msa0496460-mRNA-1:five_prime_utr;Parent=Msa0496460-mRNA-1 |
| chr3_4 | five_prime_UTR | 27252571 | 27252587 | 27252571 | ID=Msa0496460-mRNA-1:five_prime_utr;Parent=Msa0496460-mRNA-1 |
| chr3_4 | CDS | 27251836 | 27252570 | 27251836 | ID=Msa0496460-mRNA-1:cds;Parent=Msa0496460-mRNA-1 |
| chr3_4 | CDS | 27251089 | 27251315 | 27251089 | ID=Msa0496460-mRNA-1:cds;Parent=Msa0496460-mRNA-1 |
| chr3_4 | CDS | 27250630 | 27250821 | 27250630 | ID=Msa0496460-mRNA-1:cds;Parent=Msa0496460-mRNA-1 |
| chr3_4 | CDS | 27250392 | 27250548 | 27250392 | ID=Msa0496460-mRNA-1:cds;Parent=Msa0496460-mRNA-1 |
| chr3_4 | CDS | 27249736 | 27249984 | 27249736 | ID=Msa0496460-mRNA-1:cds;Parent=Msa0496460-mRNA-1 |
| chr3_4 | three_prime_UTR | 27249495 | 27249735 | 27249495 | ID=Msa0496460-mRNA-1:three_prime_utr;Parent=Msa0496460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
