AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0325510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0325510 MtrunA17_Chr2g0303731 98.621 580 8 0 1 580 1 580 0.0 1173
Msa0325510 MtrunA17_Chr8g0376631 84.402 577 89 1 1 577 1 576 0.0 978
Msa0325510 MtrunA17_Chr2g0303701 73.997 573 143 4 1 571 1 569 0.0 836
Msa0325510 MtrunA17_Chr8g0376601 70.246 568 167 2 1 568 1 566 0.0 805
Msa0325510 MtrunA17_Chr8g0376611 76.295 502 116 2 70 571 3 501 0.0 782
Msa0325510 MtrunA17_Chr2g0290181 57.848 567 229 5 2 562 3 565 0.0 650
Msa0325510 MtrunA17_Chr2g0290161 51.793 502 206 7 67 562 1 472 1.36e-165 480
Msa0325510 MtrunA17_Chr5g0434261 53.281 381 125 4 188 568 1 328 2.17e-133 392
Msa0325510 MtrunA17_Chr7g0214451 57.925 347 143 1 21 367 28 371 4.97e-131 392
Msa0325510 MtrunA17_Chr7g0214451 56.154 130 52 1 450 579 376 500 3.73e-39 150
Msa0325510 MtrunA17_Chr1g0213611 58.011 362 141 2 6 367 66 416 2.85e-130 392
Msa0325510 MtrunA17_Chr1g0213611 54.962 131 54 1 450 580 425 550 3.84e-39 150
Msa0325510 MtrunA17_Chr1g0213631 56.347 323 138 1 45 367 4 323 4.33e-114 347
Msa0325510 MtrunA17_Chr1g0213631 54.962 131 59 0 447 577 326 456 4.55e-39 149
Msa0325510 MtrunA17_Chr6g0450271 70.103 194 56 1 223 416 32 223 1.48e-85 266
Msa0325510 MtrunA17_Chr5g0434251 73.418 158 41 1 415 572 2 158 1.98e-80 249
Msa0325510 MtrunA17_Chr6g0450291 71.176 170 47 1 248 417 1 168 4.50e-75 236
Msa0325510 MtrunA17_Chr5g0434231 68.786 173 30 1 70 242 6 154 1.92e-74 234
Msa0325510 MtrunA17_Chr6g0450241 70.588 170 48 1 248 417 1 168 4.27e-74 234
Msa0325510 MtrunA17_Chr6g0450281 71.006 169 47 1 248 416 1 167 4.66e-74 234
Msa0325510 MtrunA17_Chr7g0250881 36.778 329 198 3 33 361 72 390 2.30e-59 206
Msa0325510 MtrunA17_Chr7g0250881 35.780 109 70 0 449 557 398 506 1.03e-12 70.9
Msa0325510 MtrunA17_Chr4g0036021 35.817 349 209 6 22 358 23 368 5.58e-59 205
Msa0325510 MtrunA17_Chr4g0036021 33.628 113 69 1 460 572 394 500 1.12e-11 67.4
Msa0325510 MtrunA17_Chr2g0282031 36.607 336 207 3 25 357 52 384 3.17e-58 203
Msa0325510 MtrunA17_Chr2g0282031 39.091 110 60 1 453 555 393 502 1.87e-14 76.3
Msa0325510 MtrunA17_Chr6g0457781 36.890 328 197 3 33 360 112 429 2.93e-57 201
Msa0325510 MtrunA17_Chr6g0457781 35.849 106 68 0 449 554 438 543 3.42e-12 69.3
Msa0325510 MtrunA17_Chr6g0485661 36.620 355 212 6 7 353 37 386 3.20e-54 192
Msa0325510 MtrunA17_Chr3g0144361 34.140 372 207 8 20 362 18 380 1.94e-53 190
Msa0325510 MtrunA17_Chr4g0034681 32.778 360 222 6 22 364 26 382 3.41e-53 189
Msa0325510 MtrunA17_Chr4g0034681 30.894 123 74 2 455 572 388 504 4.38e-11 65.5
Msa0325510 MtrunA17_Chr5g0394341 32.703 370 221 7 24 372 20 382 2.23e-51 184
Msa0325510 MtrunA17_Chr4g0021771 34.911 338 212 5 25 358 54 387 3.63e-51 184
Msa0325510 MtrunA17_Chr4g0021771 45.833 96 52 0 461 556 410 505 5.87e-18 87.4
Msa0325510 MtrunA17_Chr8g0390521 35.088 342 203 6 23 353 15 348 3.07e-50 181
Msa0325510 MtrunA17_Chr8g0390521 39.560 91 55 0 463 553 381 471 2.47e-11 66.2
Msa0325510 MtrunA17_Chr8g0373531 35.072 345 204 6 23 351 16 356 7.01e-50 180
Msa0325510 MtrunA17_Chr8g0373531 34.906 106 69 0 452 557 381 486 1.04e-13 73.9
Msa0325510 MtrunA17_Chr5g0432581 33.799 358 215 5 23 361 16 370 1.25e-49 179
Msa0325510 MtrunA17_Chr5g0432581 36.190 105 67 0 452 556 381 485 2.98e-12 69.3
Msa0325510 MtrunA17_Chr5g0434241 79.208 101 21 0 248 348 1 101 7.12e-49 165
Msa0325510 MtrunA17_Chr3g0121674 48.824 170 84 1 188 357 1 167 3.56e-48 170
Msa0325510 MtrunA17_Chr3g0121674 50.758 132 57 2 450 580 183 307 9.56e-37 139
Msa0325510 MtrunA17_Chr1g0205681 31.768 362 217 7 33 372 30 383 3.70e-47 172
Msa0325510 MtrunA17_Chr1g0205671 31.267 371 226 9 23 372 20 382 2.99e-46 170
Msa0325510 MtrunA17_Chr5g0403831 33.149 362 215 8 16 358 21 374 1.54e-45 168
Msa0325510 MtrunA17_Chr1g0205691 32.873 362 213 8 33 372 29 382 1.87e-45 168
Msa0325510 MtrunA17_Chr5g0445601 30.952 378 234 7 1 359 1 370 2.76e-44 164
Msa0325510 MtrunA17_Chr4g0032021 32.865 356 221 8 20 360 92 444 6.87e-44 164
Msa0325510 MtrunA17_Chr4g0032021 36.000 100 64 0 452 551 453 552 5.38e-13 71.6
Msa0325510 MtrunA17_Chr4g0065311 30.159 378 233 8 1 360 1 365 2.76e-43 161
Msa0325510 MtrunA17_Chr4g0065311 38.793 116 58 4 454 565 384 490 6.20e-13 71.2
Msa0325510 MtrunA17_Chr1g0164851 29.204 339 215 5 23 343 20 351 4.75e-43 161
Msa0325510 MtrunA17_Chr1g0164871 29.290 338 214 5 24 343 21 351 5.01e-43 161
Msa0325510 MtrunA17_Chr8g0390141 30.607 379 226 9 21 371 18 387 8.53e-43 160
Msa0325510 MtrunA17_Chr7g0257631 31.268 355 214 6 25 359 60 404 2.47e-42 159
Msa0325510 MtrunA17_Chr4g0039651 32.362 343 199 8 36 356 55 386 3.82e-42 158
Msa0325510 MtrunA17_Chr4g0039651 42.424 99 57 0 452 550 399 497 1.19e-14 76.6
Msa0325510 MtrunA17_Chr4g0048051 30.792 341 206 6 24 343 21 352 1.82e-41 157
Msa0325510 MtrunA17_Chr5g0437021 29.586 338 213 5 24 343 21 351 2.21e-41 156
Msa0325510 MtrunA17_Chr5g0417611 31.304 345 202 9 23 343 20 353 7.56e-41 155
Msa0325510 MtrunA17_Chr4g0048411 31.563 339 206 5 24 343 21 352 2.24e-40 154
Msa0325510 MtrunA17_Chr3g0119401 31.563 339 218 5 24 360 95 421 2.42e-40 154
Msa0325510 MtrunA17_Chr6g0486021 31.977 344 217 7 14 355 40 368 4.02e-40 152
Msa0325510 MtrunA17_Chr8g0390261 29.565 345 217 6 34 359 34 371 6.86e-40 152
Msa0325510 MtrunA17_Chr3g0144261 39.091 220 129 3 29 246 7 223 1.07e-39 154
Msa0325510 MtrunA17_Chr3g0144261 37.079 89 56 0 459 547 623 711 5.88e-12 68.6
Msa0325510 MtrunA17_Chr5g0420841 30.747 348 210 7 33 358 28 366 5.82e-39 149
Msa0325510 MtrunA17_Chr4g0065324 30.060 336 211 6 25 343 28 356 6.16e-39 149
Msa0325510 MtrunA17_Chr4g0065324 37.838 111 58 3 457 564 395 497 2.22e-11 66.6
Msa0325510 MtrunA17_Chr3g0128081 29.944 354 219 8 26 358 22 367 7.35e-39 149
Msa0325510 MtrunA17_Chr6g0486681 29.275 345 216 6 35 359 35 371 4.45e-38 147
Msa0325510 MtrunA17_Chr6g0486671 29.275 345 216 6 35 359 35 371 4.45e-38 147
Msa0325510 MtrunA17_Chr1g0155221 32.056 287 177 5 78 361 98 369 1.91e-37 145
Msa0325510 MtrunA17_Chr1g0155221 30.833 120 79 2 438 554 371 489 1.62e-11 67.0
Msa0325510 MtrunA17_Chr3g0085971 31.250 336 194 9 33 343 28 351 2.39e-37 145
Msa0325510 MtrunA17_Chr4g0004821 31.437 334 214 6 21 353 33 352 6.05e-37 143
Msa0325510 MtrunA17_Chr8g0376621 88.235 68 8 0 1 68 1 68 4.91e-36 129
Msa0325510 MtrunA17_Chr3g0115721 31.672 341 205 8 37 359 34 364 6.29e-36 141
Msa0325510 MtrunA17_Chr3g0115741 29.155 343 210 8 37 358 37 367 9.98e-36 140
Msa0325510 MtrunA17_Chr3g0146061 33.945 327 196 8 36 353 14 329 1.48e-35 142
Msa0325510 MtrunA17_Chr3g0146061 34.653 101 66 0 447 547 621 721 1.98e-12 70.1
Msa0325510 MtrunA17_Chr3g0115711 27.907 344 226 5 37 364 34 371 1.86e-35 139
Msa0325510 MtrunA17_Chr7g0259471 31.579 342 211 8 24 361 37 359 3.70e-35 138
Msa0325510 MtrunA17_Chr7g0259471 39.048 105 59 2 452 554 373 474 8.48e-14 73.9
Msa0325510 MtrunA17_Chr5g0434221 86.765 68 9 0 1 68 1 68 5.34e-35 126
Msa0325510 MtrunA17_Chr2g0286721 30.952 336 215 7 26 360 49 368 9.81e-35 137
Msa0325510 MtrunA17_Chr3g0128171 31.164 292 186 7 56 343 25 305 1.19e-34 136
Msa0325510 MtrunA17_Chr3g0115751 29.651 344 216 7 33 359 35 369 1.48e-34 137
Msa0325510 MtrunA17_Chr3g0078991 30.702 342 205 9 25 343 22 354 1.81e-34 137
Msa0325510 MtrunA17_Chr5g0407441 32.900 231 152 3 26 254 4 233 7.97e-34 137
Msa0325510 MtrunA17_Chr5g0407441 32.323 99 67 0 449 547 605 703 8.27e-11 65.1
Msa0325510 MtrunA17_Chr7g0273281 28.916 332 218 7 36 366 72 386 1.29e-33 134
Msa0325510 MtrunA17_Chr7g0273281 36.111 108 68 1 452 559 395 501 4.39e-13 72.0
Msa0325510 MtrunA17_Chr4g0066581 29.499 339 216 6 26 360 52 371 2.20e-33 133
Msa0325510 MtrunA17_Chr4g0066581 34.951 103 66 1 452 554 386 487 4.60e-12 68.6
Msa0325510 MtrunA17_Chr8g0373181 31.105 344 206 9 26 361 47 367 2.42e-33 133
Msa0325510 MtrunA17_Chr8g0373181 33.333 117 70 3 435 550 373 482 3.89e-12 68.9
Msa0325510 MtrunA17_Chr3g0115781 30.000 340 211 7 37 358 36 366 3.33e-33 133
Msa0325510 MtrunA17_Chr8g0370141 32.444 225 147 4 26 247 4 226 2.83e-32 128
Msa0325510 MtrunA17_Chr7g0259221 29.942 344 218 8 22 361 37 361 1.65e-31 127
Msa0325510 MtrunA17_Chr7g0259221 42.000 100 55 2 452 550 375 472 7.68e-14 73.9
Msa0325510 MtrunA17_Chr3g0078971 29.942 344 208 9 23 343 20 353 4.25e-31 127
Msa0325510 MtrunA17_Chr3g0078791 29.897 291 171 6 56 343 17 277 3.17e-29 120
Msa0325510 MtrunA17_Chr5g0419321 33.014 209 137 3 48 254 54 261 8.15e-29 121
Msa0325510 MtrunA17_Chr5g0419321 31.818 110 74 1 438 547 621 729 4.84e-11 65.9
Msa0325510 MtrunA17_Chr8g0373191 29.693 293 166 7 73 361 83 339 2.65e-28 118
Msa0325510 MtrunA17_Chr3g0115731 27.507 349 187 12 37 358 34 343 1.12e-21 98.6
Msa0325510 MtrunA17_Chr5g0404191 33.708 178 108 4 73 247 94 264 1.97e-20 92.0
Msa0325510 MtrunA17_Chr2g0290171 59.701 67 24 1 2 68 3 66 6.69e-20 84.0
Msa0325510 MtrunA17_Chr7g0273271 32.584 178 112 3 36 213 37 206 1.13e-19 87.8
Msa0325510 MtrunA17_Chr4g0065351 28.638 213 144 4 148 359 2 207 6.15e-19 89.0
Msa0325510 MtrunA17_Chr5g0404181 33.607 122 71 3 437 550 9 128 2.59e-14 70.1
Msa0325510 MtrunA17_Chr6g0450251 58.333 48 18 1 369 416 1 46 4.07e-14 67.8
Msa0325510 MtrunA17_Chr7g0273261 35.156 128 75 2 452 579 137 256 1.78e-13 70.9
Msa0325510 MtrunA17_Chr8g0370151 33.663 101 67 0 449 549 244 344 3.58e-11 65.1
Msa0325510 MtrunA17_Chr2g0319001 26.316 285 177 12 76 341 131 401 6.72e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0325510 AT1G30220.1 71.157 579 162 4 1 575 1 578 0.0 842
Msa0325510 AT4G16480.2 58.082 563 224 6 1 554 2 561 0.0 652
Msa0325510 AT4G16480.3 58.082 563 224 6 1 554 2 561 0.0 652
Msa0325510 AT4G16480.1 58.082 563 224 6 1 554 2 561 0.0 652
Msa0325510 AT2G35740.1 55.000 540 231 5 24 554 24 560 0.0 635
Msa0325510 AT2G43330.1 58.671 346 139 2 23 367 28 370 3.75e-124 375
Msa0325510 AT2G43330.1 60.163 123 48 1 450 571 376 498 7.50e-42 158
Msa0325510 AT3G18830.1 28.571 581 297 13 22 578 32 518 3.57e-60 209
Msa0325510 AT4G36670.1 36.182 351 201 6 23 356 14 358 2.97e-56 197
Msa0325510 AT4G36670.1 36.538 104 66 0 452 555 378 481 4.22e-14 75.5
Msa0325510 AT2G20780.1 36.364 341 209 5 20 357 49 384 5.36e-54 192
Msa0325510 AT2G20780.1 41.284 109 60 1 452 556 399 507 1.51e-16 83.2
Msa0325510 AT5G16150.2 36.593 317 191 3 33 349 112 418 2.15e-52 188
Msa0325510 AT5G16150.2 34.259 108 71 0 443 550 432 539 2.23e-11 67.0
Msa0325510 AT5G16150.1 36.593 317 191 3 33 349 112 418 2.15e-52 188
Msa0325510 AT5G16150.1 34.259 108 71 0 443 550 432 539 2.23e-11 67.0
Msa0325510 AT5G16150.3 36.593 317 191 3 33 349 112 418 2.15e-52 188
Msa0325510 AT5G16150.3 34.259 108 71 0 443 550 432 539 2.23e-11 67.0
Msa0325510 AT2G18480.1 37.465 355 199 8 23 358 15 365 2.82e-52 187
Msa0325510 AT2G18480.1 44.118 102 57 0 452 553 382 483 3.70e-17 85.1
Msa0325510 AT2G16120.1 33.239 355 208 5 22 356 22 367 9.41e-51 183
Msa0325510 AT2G16120.1 33.613 119 79 0 452 570 388 506 1.51e-13 73.9
Msa0325510 AT3G05960.1 32.527 372 222 9 5 359 5 364 1.75e-50 182
Msa0325510 AT1G07340.1 35.562 329 186 6 33 343 30 350 1.79e-50 182
Msa0325510 AT2G16130.1 33.428 353 202 6 28 356 24 367 6.74e-49 177
Msa0325510 AT2G16130.1 35.455 110 71 0 452 561 388 497 1.40e-13 73.9
Msa0325510 AT5G26250.1 32.861 353 211 9 25 359 21 365 6.95e-48 175
Msa0325510 AT1G50310.1 30.857 350 218 5 25 356 24 367 2.22e-47 174
Msa0325510 AT3G19940.1 30.267 337 210 6 25 343 24 353 1.68e-44 166
Msa0325510 AT5G59250.1 31.989 372 228 11 18 371 92 456 2.29e-44 166
Msa0325510 AT5G59250.1 40.000 95 57 0 457 551 460 554 1.17e-12 71.2
Msa0325510 AT5G26340.1 32.055 365 219 7 24 367 21 377 2.56e-44 165
Msa0325510 AT2G20780.2 34.940 332 203 7 31 357 3 326 5.30e-44 163
Msa0325510 AT2G20780.2 41.284 109 60 1 452 556 341 449 2.20e-16 82.4
Msa0325510 AT1G05030.1 33.642 324 206 4 33 356 86 400 5.67e-43 161
Msa0325510 AT1G11260.1 32.456 342 201 7 23 343 20 352 8.40e-43 161
Msa0325510 AT5G23270.1 31.868 364 205 8 2 343 12 354 1.11e-42 160
Msa0325510 AT5G17010.1 31.956 363 226 8 26 373 48 404 2.74e-41 156
Msa0325510 AT5G17010.3 31.956 363 226 8 26 373 48 404 2.74e-41 156
Msa0325510 AT5G17010.4 31.956 363 226 8 26 373 48 404 2.74e-41 156
Msa0325510 AT1G67300.2 31.099 373 238 8 4 373 31 387 3.02e-41 156
Msa0325510 AT1G77210.2 30.278 360 220 7 2 343 9 355 3.53e-41 156
Msa0325510 AT1G77210.1 30.278 360 220 7 2 343 9 355 3.53e-41 156
Msa0325510 AT1G79820.4 31.653 357 225 8 14 368 44 383 2.18e-40 153
Msa0325510 AT3G51490.1 36.607 224 137 4 26 246 4 225 5.76e-40 155
Msa0325510 AT3G51490.1 34.653 101 66 0 447 547 606 706 9.47e-12 68.6
Msa0325510 AT3G51490.2 36.607 224 137 4 26 246 4 225 6.74e-40 155
Msa0325510 AT3G51490.2 42.718 103 50 2 265 358 503 605 1.42e-12 71.2
Msa0325510 AT3G51490.2 34.653 101 66 0 447 547 614 714 9.13e-12 68.6
Msa0325510 AT5G61520.1 30.691 391 237 11 7 372 5 386 7.05e-40 152
Msa0325510 AT1G79820.2 31.933 357 224 8 14 368 44 383 7.14e-40 152
Msa0325510 AT1G79820.1 31.933 357 224 8 14 368 44 383 7.14e-40 152
Msa0325510 AT1G67300.4 31.519 349 222 7 4 349 31 365 9.12e-40 150
Msa0325510 AT1G67300.5 31.519 349 222 7 4 349 31 365 9.12e-40 150
Msa0325510 AT1G20840.2 38.565 223 130 4 29 248 7 225 1.11e-39 155
Msa0325510 AT1G20840.2 39.785 93 56 0 459 551 625 717 4.06e-13 72.8
Msa0325510 AT1G20840.1 38.565 223 130 4 29 248 7 225 1.11e-39 155
Msa0325510 AT1G20840.1 39.785 93 56 0 459 551 625 717 4.06e-13 72.8
Msa0325510 AT1G67300.6 31.519 349 222 7 4 349 31 365 1.44e-39 150
Msa0325510 AT1G67300.7 31.519 349 222 7 4 349 31 365 1.44e-39 150
Msa0325510 AT1G67300.1 31.519 349 222 7 4 349 31 365 2.12e-39 151
Msa0325510 AT1G67300.3 31.519 349 222 7 4 349 31 365 2.12e-39 151
Msa0325510 AT3G19930.1 30.882 340 206 8 24 343 21 351 2.61e-39 151
Msa0325510 AT3G19930.2 30.882 340 206 8 24 343 21 351 2.61e-39 151
Msa0325510 AT4G21480.1 32.249 338 201 5 25 343 22 350 3.13e-39 150
Msa0325510 AT4G02050.2 29.261 352 225 7 25 359 26 370 1.07e-38 149
Msa0325510 AT4G02050.1 29.261 352 225 7 25 359 26 370 1.07e-38 149
Msa0325510 AT2G48020.4 31.085 341 216 7 23 361 24 347 1.40e-38 146
Msa0325510 AT1G05030.2 33.677 291 185 3 67 357 67 349 2.90e-38 147
Msa0325510 AT2G48020.2 31.085 341 216 7 23 361 24 347 6.14e-38 146
Msa0325510 AT2G48020.2 44.231 104 55 2 452 554 361 462 3.27e-17 85.1
Msa0325510 AT2G48020.1 31.085 341 216 7 23 361 24 347 6.14e-38 146
Msa0325510 AT2G48020.1 44.231 104 55 2 452 554 361 462 3.27e-17 85.1
Msa0325510 AT3G03090.1 30.612 343 207 6 35 356 56 388 6.58e-38 147
Msa0325510 AT5G61520.2 32.686 309 196 8 67 372 39 338 5.63e-37 143
Msa0325510 AT5G27360.4 33.233 331 203 6 31 360 40 353 1.89e-36 141
Msa0325510 AT5G27360.3 33.233 331 203 6 31 360 88 401 2.50e-36 142
Msa0325510 AT5G27360.3 35.135 111 71 1 446 556 410 519 3.03e-11 66.6
Msa0325510 AT5G27360.1 33.233 331 203 6 31 360 40 353 5.71e-36 141
Msa0325510 AT5G27360.1 37.255 102 63 1 455 556 371 471 2.62e-11 66.6
Msa0325510 AT2G48020.3 31.269 323 203 7 23 343 24 329 1.52e-35 137
Msa0325510 AT1G75220.1 32.653 294 180 6 78 368 97 375 4.38e-35 138
Msa0325510 AT1G75220.1 35.870 92 58 1 463 554 397 487 5.24e-12 68.9
Msa0325510 AT4G35300.9 38.028 213 129 3 36 246 14 225 1.07e-34 140
Msa0325510 AT4G35300.9 39.583 96 58 0 452 547 615 710 1.02e-13 74.7
Msa0325510 AT4G35300.2 38.028 213 129 3 36 246 14 225 1.07e-34 140
Msa0325510 AT4G35300.2 39.583 96 58 0 452 547 615 710 1.02e-13 74.7
Msa0325510 AT4G35300.3 38.028 213 129 3 36 246 14 225 1.07e-34 140
Msa0325510 AT4G35300.3 39.583 96 58 0 452 547 615 710 1.02e-13 74.7
Msa0325510 AT4G35300.4 38.028 213 129 3 36 246 14 225 1.10e-34 140
Msa0325510 AT4G35300.4 39.583 96 58 0 452 547 625 720 1.09e-13 74.7
Msa0325510 AT4G35300.8 38.028 213 129 3 36 246 14 225 1.10e-34 140
Msa0325510 AT4G35300.8 39.583 96 58 0 452 547 625 720 1.09e-13 74.7
Msa0325510 AT4G35300.6 38.028 213 129 3 36 246 14 225 1.10e-34 140
Msa0325510 AT4G35300.6 39.583 96 58 0 452 547 625 720 1.09e-13 74.7
Msa0325510 AT4G35300.11 38.028 213 129 3 36 246 14 225 1.10e-34 140
Msa0325510 AT4G35300.11 39.583 96 58 0 452 547 625 720 1.09e-13 74.7
Msa0325510 AT4G35300.1 38.028 213 129 3 36 246 14 225 1.10e-34 140
Msa0325510 AT4G35300.1 39.583 96 58 0 452 547 625 720 1.09e-13 74.7
Msa0325510 AT4G35300.10 38.028 213 129 3 36 246 14 225 1.10e-34 140
Msa0325510 AT4G35300.10 39.583 96 58 0 452 547 625 720 1.09e-13 74.7
Msa0325510 AT4G35300.7 38.028 213 129 3 36 246 14 225 1.10e-34 140
Msa0325510 AT4G35300.7 39.583 96 58 0 452 547 625 720 1.09e-13 74.7
Msa0325510 AT3G05400.1 33.099 284 175 6 78 360 75 344 1.15e-34 137
Msa0325510 AT3G05155.1 29.882 338 218 6 23 360 24 342 5.74e-34 135
Msa0325510 AT3G05155.1 37.255 102 59 2 452 551 358 456 1.99e-14 76.3
Msa0325510 AT1G19450.1 33.000 300 171 7 78 368 98 376 1.62e-33 134
Msa0325510 AT3G05155.2 30.218 321 205 6 23 343 24 325 2.37e-33 130
Msa0325510 AT5G18840.1 30.178 338 215 7 26 360 44 363 6.38e-33 132
Msa0325510 AT5G18840.1 39.815 108 60 2 452 557 378 482 1.84e-13 73.6
Msa0325510 AT1G08930.1 29.305 331 216 8 31 360 63 376 9.80e-32 129
Msa0325510 AT1G08930.1 33.000 100 66 1 455 554 394 492 6.38e-12 68.6
Msa0325510 AT1G08930.2 29.305 331 216 8 31 360 63 376 9.80e-32 129
Msa0325510 AT1G08930.2 33.000 100 66 1 455 554 394 492 6.38e-12 68.6
Msa0325510 AT3G05400.2 32.394 284 157 7 78 360 75 324 1.52e-31 127
Msa0325510 AT1G34580.1 28.446 341 218 6 37 358 35 368 1.70e-31 128
Msa0325510 AT5G27350.1 30.904 343 219 6 31 373 36 360 2.70e-31 127
Msa0325510 AT5G27350.1 38.384 99 60 1 452 550 364 461 5.28e-11 65.5
Msa0325510 AT3G51490.3 37.714 175 105 3 75 246 2 175 2.35e-30 126
Msa0325510 AT3G51490.3 42.718 103 50 2 265 358 453 555 1.32e-12 71.2
Msa0325510 AT3G51490.3 34.653 101 66 0 447 547 564 664 9.22e-12 68.6
Msa0325510 AT1G54730.3 29.474 285 186 6 78 361 81 351 2.75e-30 124
Msa0325510 AT1G54730.2 29.474 285 186 6 78 361 81 351 2.97e-30 124
Msa0325510 AT1G54730.2 37.000 100 62 1 451 550 364 462 1.30e-12 70.5
Msa0325510 AT1G54730.9 29.577 284 185 6 78 360 81 350 3.16e-30 123
Msa0325510 AT1G54730.7 29.577 284 185 6 78 360 81 350 3.16e-30 123
Msa0325510 AT1G34580.2 29.831 295 197 4 67 358 31 318 4.22e-30 124
Msa0325510 AT3G05165.4 30.211 331 213 5 31 360 35 348 8.65e-30 123
Msa0325510 AT3G05165.5 30.211 331 213 5 31 360 35 348 8.65e-30 123
Msa0325510 AT3G05150.1 32.028 281 175 6 78 356 84 350 1.13e-29 122
Msa0325510 AT3G05150.1 40.385 104 57 2 452 553 369 469 7.03e-15 77.8
Msa0325510 AT3G05150.3 32.028 281 175 6 78 356 84 350 1.13e-29 122
Msa0325510 AT3G05150.3 40.385 104 57 2 452 553 369 469 7.03e-15 77.8
Msa0325510 AT3G05150.2 32.028 281 175 6 78 356 84 350 1.40e-29 122
Msa0325510 AT3G05150.2 38.462 117 66 3 452 566 369 481 1.04e-15 80.5
Msa0325510 AT1G50310.2 31.507 219 143 3 139 356 12 224 1.52e-29 120
Msa0325510 AT3G05165.3 30.211 331 213 5 31 360 35 348 2.46e-29 121
Msa0325510 AT3G05165.2 30.211 331 213 5 31 360 35 348 2.46e-29 121
Msa0325510 AT3G05165.1 30.211 331 213 5 31 360 35 348 2.46e-29 121
Msa0325510 AT3G05165.6 30.211 331 213 5 31 360 35 348 2.88e-29 122
Msa0325510 AT1G54730.11 29.963 267 172 6 78 343 81 333 3.57e-29 119
Msa0325510 AT4G04750.1 30.634 284 184 5 78 360 85 356 4.67e-29 121
Msa0325510 AT4G04750.2 30.634 284 184 5 78 360 85 356 4.67e-29 121
Msa0325510 AT4G04750.3 30.634 284 184 5 78 360 129 400 5.37e-29 121
Msa0325510 AT4G04750.3 35.849 106 67 1 452 557 415 519 9.18e-11 65.1
Msa0325510 AT5G27360.2 32.950 261 160 5 101 360 3 249 1.09e-28 118
Msa0325510 AT5G27360.2 37.255 102 63 1 455 556 267 367 2.79e-11 65.9
Msa0325510 AT5G27360.5 32.950 261 160 5 101 360 3 249 1.09e-28 118
Msa0325510 AT5G27360.5 37.255 102 63 1 455 556 267 367 2.79e-11 65.9
Msa0325510 AT5G17010.2 33.096 281 164 7 26 287 45 320 1.23e-28 119
Msa0325510 AT3G05160.1 29.909 331 214 6 31 360 26 339 1.38e-28 119
Msa0325510 AT1G08920.3 30.769 325 207 8 26 349 32 339 1.77e-28 119
Msa0325510 AT1G08920.1 30.769 325 207 8 26 349 32 339 1.91e-28 119
Msa0325510 AT1G08920.1 37.374 99 61 1 455 553 368 465 5.71e-11 65.5
Msa0325510 AT3G05160.3 30.282 284 183 5 78 360 21 290 5.20e-28 117
Msa0325510 AT3G05160.2 30.282 284 183 5 78 360 21 290 5.20e-28 117
Msa0325510 AT1G08920.2 30.530 321 205 8 26 345 32 335 8.34e-28 117
Msa0325510 AT1G08920.2 37.374 99 61 1 455 553 375 472 5.75e-11 65.5
Msa0325510 AT1G79820.3 27.731 357 191 7 14 368 44 335 6.89e-27 114
Msa0325510 AT4G04760.1 28.613 346 229 8 23 366 29 358 9.88e-27 114
Msa0325510 AT4G04760.1 34.454 119 72 3 435 553 355 467 2.57e-11 66.6
Msa0325510 AT1G08890.1 28.070 285 190 5 78 361 76 346 1.64e-26 113
Msa0325510 AT1G08890.1 35.294 102 61 2 454 553 362 460 4.71e-11 65.9
Msa0325510 AT4G04760.3 28.966 290 194 5 78 366 21 299 2.16e-26 112
Msa0325510 AT4G04760.3 34.454 119 72 3 435 553 296 408 2.43e-11 66.6
Msa0325510 AT1G54730.8 28.794 257 170 6 78 333 81 325 3.31e-26 111
Msa0325510 AT1G54730.4 28.794 257 170 6 78 333 81 325 3.40e-26 111
Msa0325510 AT1G54730.5 28.794 257 170 6 78 333 81 325 4.45e-26 111
Msa0325510 AT1G54730.5 37.000 100 62 1 451 550 343 441 1.33e-12 70.5
Msa0325510 AT1G54730.10 30.172 232 151 5 78 308 81 302 8.90e-26 108
Msa0325510 AT1G54730.6 30.172 232 151 5 78 308 81 302 8.90e-26 108
Msa0325510 AT1G08900.4 30.182 275 177 4 78 351 74 334 1.11e-24 107
Msa0325510 AT1G08900.3 30.182 275 177 4 78 351 66 326 1.82e-24 107
Msa0325510 AT1G08900.3 36.538 104 65 1 452 555 350 452 8.85e-13 71.2
Msa0325510 AT1G08900.1 30.182 275 177 4 78 351 74 334 1.96e-24 107
Msa0325510 AT1G08900.1 36.538 104 65 1 452 555 358 460 8.85e-13 71.2
Msa0325510 AT1G08900.2 30.182 275 177 4 78 351 74 334 1.96e-24 107
Msa0325510 AT1G08900.2 36.538 104 65 1 452 555 358 460 8.85e-13 71.2
Msa0325510 AT1G08900.5 30.182 275 177 4 78 351 32 292 1.98e-24 106
Msa0325510 AT1G08900.5 36.538 104 65 1 452 555 316 418 8.78e-13 70.9
Msa0325510 AT1G77210.3 33.010 206 131 3 139 343 7 206 2.10e-24 105
Msa0325510 AT4G04760.2 28.099 363 230 11 23 383 29 362 2.73e-23 103
Msa0325510 AT4G04760.2 36.275 102 64 1 452 553 364 464 2.84e-11 66.6
Msa0325510 AT3G20460.1 27.612 268 175 5 78 342 102 353 3.94e-23 103
Msa0325510 AT1G79820.5 31.098 164 108 2 108 271 73 231 3.87e-14 74.7
Msa0325510 AT4G35300.5 39.583 96 58 0 452 547 428 523 4.66e-14 75.5
Msa0325510 AT1G76430.1 25.064 391 220 15 5 341 1 372 3.16e-12 69.7

Find 125 sgRNAs with CRISPR-Local

Find 301 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGGAAGTCCCTTTGTTTC+TGG 0.144531 2_4:+33031949 None:intergenic
CATATTCCTCTGTATCTTAA+TGG 0.207748 2_4:+33032123 None:intergenic
AACAACCAACGAGGTGATTC+TGG 0.232258 2_4:+33033591 None:intergenic
TTGTGCTTCTGCTGGTAATA+AGG 0.263297 2_4:-33032722 Msa0325510:intron
CTTCGTCTTGCTTTCTCTGC+TGG 0.283773 2_4:-33036942 Msa0325510:CDS
CTATCATTGACTGATGCTAT+TGG 0.289689 2_4:-33032042 Msa0325510:CDS
TAAACCTCTTCTCACTGTTT+TGG 0.304026 2_4:+33033146 None:intergenic
TCCAAAGCTGTTCTATAATC+AGG 0.305686 2_4:+33032799 None:intergenic
CTTGCTTTCTCTGCTGGAAT+TGG 0.312834 2_4:-33036936 Msa0325510:CDS
TTTCTCTTTGGCTATGATAC+TGG 0.318446 2_4:-33036909 Msa0325510:intron
TTTCGTTGGCTCAGTTGTTA+TGG 0.324653 2_4:-33034390 Msa0325510:CDS
GTTTGAAGATGAATCGTCTT+TGG 0.333336 2_4:+33033197 None:intergenic
CATGGAACTGTTCCCATTCC+TGG 0.335209 2_4:+33032168 None:intergenic
GTATATGCAGGAGTCATATC+TGG 0.338067 2_4:-33036666 Msa0325510:intron
AATGGTTGGCTAGCACTAAT+TGG 0.340967 2_4:-33032219 Msa0325510:CDS
GAAGCTTCTGAGATGTATAA+AGG 0.341757 2_4:+33034287 None:intergenic
TAGATGTTGCATGCTGGATT+AGG 0.342195 2_4:-33031792 Msa0325510:three_prime_UTR
AACATCCACCTCCATGTTCC+TGG 0.343861 2_4:+33033666 None:intergenic
TGGTGTTGGAATGGCTTCAA+TGG 0.344762 2_4:-33034315 Msa0325510:CDS
CCCTGATTATAGAACAGCTT+TGG 0.346016 2_4:-33032800 Msa0325510:CDS
TTGCCAAAACTTAAAATTCA+AGG 0.346391 2_4:+33031894 None:intergenic
CAAATCTTCCAACAATTTGT+TGG 0.347482 2_4:-33033105 Msa0325510:CDS
TTGATCTTCTGTTGTGTCAT+TGG 0.349282 2_4:+33032293 None:intergenic
GGTAGAGTCTTTGTTGGTCT+TGG 0.353726 2_4:-33034335 Msa0325510:CDS
AAATAATAACAAGTTCTATA+TGG 0.359663 2_4:+33031665 None:intergenic
GAATAGCATCAACATCAAAT+TGG 0.360652 2_4:-33032095 Msa0325510:CDS
GAGAATGGGTTGTAGTTTGA+TGG 0.362200 2_4:+33032866 None:intergenic
AAAGCAGAGACATCAGCTTC+AGG 0.373152 2_4:+33037005 None:intergenic
CAACAAAAGCTTCTTCCTTC+CGG 0.381924 2_4:+33032939 None:intergenic
ACGGCTGGAATTAATGCATT+TGG 0.384059 2_4:-33032994 Msa0325510:CDS
GGATGGATTAACGATCGATT+TGG 0.386792 2_4:-33034449 Msa0325510:CDS
AGCTTTGGATGCTGCTCAAT+GGG 0.389006 2_4:-33032785 Msa0325510:CDS
CCTTTCCTATGTTATCAACT+TGG 0.391524 2_4:-33034201 Msa0325510:CDS
AATCCAGCTATTCTCATTGT+TGG 0.399302 2_4:-33034356 Msa0325510:CDS
CCATTCCTGGTGAGAAGAAT+AGG 0.401944 2_4:+33032181 None:intergenic
GAGAATGTTTGTCTCTATCA+TGG 0.407356 2_4:-33036980 Msa0325510:CDS
ATTGTTGGTAGAGTCTTTGT+TGG 0.407548 2_4:-33034341 Msa0325510:CDS
GAAGCACAAAATCCACATTC+AGG 0.414289 2_4:+33032736 None:intergenic
GTCTTTGTTGGTCTTGGTGT+TGG 0.414920 2_4:-33034329 Msa0325510:CDS
CCAACCATCGTTCAATTAGC+TGG 0.418635 2_4:-33033057 Msa0325510:CDS
ATTATTGTGCAGCTATTACC+TGG 0.428833 2_4:-33032330 Msa0325510:intron
TGTTGGTCTTGGTGTTGGAA+TGG 0.433663 2_4:-33034324 Msa0325510:CDS
CTTCTGTCGCTTGTCACGGC+TGG 0.433817 2_4:-33033009 Msa0325510:CDS
ACTAAAAGAATCAGTTGAAA+TGG 0.434132 2_4:-33033223 Msa0325510:CDS
ATGTTCTCAACCTCTTCAAT+AGG 0.434255 2_4:+33031931 None:intergenic
AAGCTTCTGAGATGTATAAA+GGG 0.435861 2_4:+33034288 None:intergenic
GCTTTCTCTGCTGGAATTGG+TGG 0.439243 2_4:-33036933 Msa0325510:CDS
GGAGCTCTTGTTAGTCTCAA+TGG 0.441346 2_4:-33034248 Msa0325510:CDS
TTCACTAACCATAGGAGAAT+GGG 0.442656 2_4:+33032852 None:intergenic
GCACTTGCTGGAGCAATCAT+AGG 0.443247 2_4:-33034485 Msa0325510:CDS
CCTATTCTTCTCACCAGGAA+TGG 0.445918 2_4:-33032181 Msa0325510:CDS
ATAGTGAGTACAGCACTTGC+TGG 0.447094 2_4:-33034497 Msa0325510:CDS
TTTCACTAACCATAGGAGAA+TGG 0.451821 2_4:+33032851 None:intergenic
AGCAAGTGCTGTACTCACTA+TGG 0.455172 2_4:+33034499 None:intergenic
GGAACATGGAGGTGGATGTT+AGG 0.455461 2_4:-33033663 Msa0325510:CDS
CTCAATGGATTTCTCATCAC+TGG 0.458618 2_4:-33034233 Msa0325510:CDS
ACCTCGTTGGTTGTTCAGAA+AGG 0.461288 2_4:-33033583 Msa0325510:intron
CAGCTTTGGATGCTGCTCAA+TGG 0.464243 2_4:-33032786 Msa0325510:CDS
ATTTCATCTTCAACATCTTG+TGG 0.465872 2_4:+33033252 None:intergenic
AAAGCAAGACGAAGAACATA+AGG 0.466895 2_4:+33036951 None:intergenic
AAGCAGAGACATCAGCTTCA+GGG 0.467694 2_4:+33037006 None:intergenic
GTATATAAGAGATGATTTCA+AGG 0.469865 2_4:-33036634 Msa0325510:CDS
CTATTCTTCTCACCAGGAAT+GGG 0.473967 2_4:-33032180 Msa0325510:CDS
TGTTGATTCCAACAAATTGT+TGG 0.475601 2_4:+33033097 None:intergenic
ATTTCAGAGTTTACAACCCA+TGG 0.480742 2_4:+33032150 None:intergenic
CTACCAACAATGAGAATAGC+TGG 0.488214 2_4:+33034353 None:intergenic
TAGAAAGCGTGCTAGTCAAA+AGG 0.492666 2_4:+33037145 None:intergenic
GTTAGGCGTTGCAGCAGTAC+CGG 0.494152 2_4:-33033646 Msa0325510:CDS
ATATGATTTGTTCAGGCACC+AGG 0.496153 2_4:-33033684 Msa0325510:intron
GCTTCTCCAACTAGAGTTCG+TGG 0.497075 2_4:-33034269 Msa0325510:CDS
GTGAGAAGAGGTTTATATGC+AGG 0.497784 2_4:-33033138 Msa0325510:CDS
TGTTAATTGTTGAAAATGGA+AGG 0.498558 2_4:-33037035 Msa0325510:exon
AGAGCTCCACGAACTCTAGT+TGG 0.502346 2_4:+33034263 None:intergenic
GGTTGGACTGTAGTACATTA+CGG 0.509940 2_4:+33033074 None:intergenic
AACTACAACCCATTCTCCTA+TGG 0.511200 2_4:-33032860 Msa0325510:CDS
ACAACCAACGAGGTGATTCT+GGG 0.512931 2_4:+33033592 None:intergenic
AAGAGATGATTTCAAGGCTG+TGG 0.514067 2_4:-33036628 Msa0325510:CDS
TATATGCAGGAGTCATATCT+GGG 0.528051 2_4:-33036665 Msa0325510:intron
TTGTTCAGGCACCAGGAACA+TGG 0.530039 2_4:-33033677 Msa0325510:intron
TTATTGTGCAGCTATTACCT+GGG 0.530370 2_4:-33032329 Msa0325510:intron
CAGGAATGGGAACAGTTCCA+TGG 0.531089 2_4:-33032167 Msa0325510:CDS
ACTTCTTCTGTCGCTTGTCA+CGG 0.535097 2_4:-33033013 Msa0325510:CDS
CATCTTCAACATCTTGTGGA+GGG 0.542544 2_4:+33033256 None:intergenic
ATGAGTTAGATGTTGCATGC+TGG 0.547138 2_4:-33031798 Msa0325510:three_prime_UTR
AAAACCAAAACAGTGAGAAG+AGG 0.551141 2_4:-33033150 Msa0325510:CDS
GTTTCAATTTCACTAACCAT+AGG 0.554411 2_4:+33032844 None:intergenic
TTAAGATACAGAGGAATATG+TGG 0.557495 2_4:-33032120 Msa0325510:CDS
CCAGCTAATTGAACGATGGT+TGG 0.558636 2_4:+33033057 None:intergenic
TGAAGAGGTTGAGAACATGT+TGG 0.558714 2_4:-33031926 Msa0325510:CDS
ATCATAGGTGCATCAGTTGG+TGG 0.558750 2_4:-33034470 Msa0325510:CDS
GGATTGCATGAAATGTCTAA+AGG 0.559120 2_4:-33032764 Msa0325510:CDS
AATACGATTTGTGTTAAAGC+CGG 0.560109 2_4:+33033627 None:intergenic
TGCTCCCAGAATCACCTCGT+TGG 0.561859 2_4:-33033596 Msa0325510:CDS
AGGCACCAGGAACATGGAGG+TGG 0.563216 2_4:-33033671 Msa0325510:CDS
CCAAAGCTGTTCTATAATCA+GGG 0.564629 2_4:+33032800 None:intergenic
TAGGTGCATCAGTTGGTGGA+TGG 0.568470 2_4:-33034466 Msa0325510:CDS
CTAAAGGCTTCTCCTGAATG+TGG 0.575072 2_4:-33032748 Msa0325510:CDS
AAAGGGACTTCCTATTGAAG+AGG 0.575338 2_4:-33031941 Msa0325510:CDS
AATGGATTTCTCATCACTGG+TGG 0.583065 2_4:-33034230 Msa0325510:CDS
GGATAGACAAACTTGGCTGC+AGG 0.583346 2_4:-33036607 Msa0325510:intron
TCATCTTCAACATCTTGTGG+AGG 0.583395 2_4:+33033255 None:intergenic
CCAAGTTGATAACATAGGAA+AGG 0.589390 2_4:+33034201 None:intergenic
TGTAACAAGTTATTATGTGA+TGG 0.592363 2_4:-33031694 Msa0325510:three_prime_UTR
AGGAATGGGAACAGTTCCAT+GGG 0.596384 2_4:-33032166 Msa0325510:CDS
ATATACTTTATCGATAAGAC+CGG 0.598293 2_4:-33032958 Msa0325510:CDS
AAGAGGTTTATATGCAGGAG+TGG 0.598713 2_4:-33033133 Msa0325510:CDS
TACATCCTATTCTTCTCACC+AGG 0.604815 2_4:-33032186 Msa0325510:CDS
GAATGCCAAGTTGATAACAT+AGG 0.609558 2_4:+33034196 None:intergenic
AGAGGTTTATATGCAGGAGT+GGG 0.619234 2_4:-33033132 Msa0325510:CDS
GGATTAACGATCGATTTGGA+AGG 0.620967 2_4:-33034445 Msa0325510:CDS
GCAATCATAGGTGCATCAGT+TGG 0.630415 2_4:-33034473 Msa0325510:CDS
TAATTGTTGAAAATGGAAGG+AGG 0.631537 2_4:-33037032 Msa0325510:exon
TTGGATATTAGACATGCCCC+AGG 0.635025 2_4:+33032312 None:intergenic
AGCAGTATATAAGAAACTGA+AGG 0.641158 2_4:+33037060 None:intergenic
AGGCTGTGGATAGACAAACT+TGG 0.642933 2_4:-33036614 Msa0325510:CDS
TATTGTGCAGCTATTACCTG+GGG 0.645299 2_4:-33032328 Msa0325510:intron
AGCTTCTGAGATGTATAAAG+GGG 0.650025 2_4:+33034289 None:intergenic
AGTCGACAATGGTACACAAG+AGG 0.654966 2_4:-33032255 Msa0325510:CDS
ACTTTATCGATAAGACCGGA+AGG 0.658367 2_4:-33032954 Msa0325510:CDS
AGATACAGAGGAATATGTGG+AGG 0.659965 2_4:-33032117 Msa0325510:CDS
ATATATCCATTAAGATACAG+AGG 0.661567 2_4:-33032129 Msa0325510:CDS
TTCAGGCACCAGGAACATGG+AGG 0.710504 2_4:-33033674 Msa0325510:intron
AAAACCAGCTAATTGAACGA+TGG 0.714042 2_4:+33033053 None:intergenic
ACCTTTCTGAACAACCAACG+AGG 0.733259 2_4:+33033582 None:intergenic
ATATGCAGGAGTCATATCTG+GGG 0.737428 2_4:-33036664 Msa0325510:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTATGGTTTAATAAA+AGG - chr2_4:33032481-33032500 Msa0325510:intron 10.0%
!!! TAATCAATCTTTTTTTATAA+AGG + chr2_4:33032896-33032915 None:intergenic 10.0%
!! TTGTATTTAATTATGTATTA+GGG + chr2_4:33033958-33033977 None:intergenic 10.0%
!! TTTGTATTTAATTATGTATT+AGG + chr2_4:33033959-33033978 None:intergenic 10.0%
!! TATTATAGACCAAATATATT+TGG - chr2_4:33032317-33032336 Msa0325510:CDS 15.0%
!!! TAATTTTTTAGATGCAATAA+AGG + chr2_4:33032590-33032609 None:intergenic 15.0%
!! TCAATTCAGTATATTATATA+TGG - chr2_4:33032730-33032749 Msa0325510:CDS 15.0%
!!! CTAACAAATTATTATTTTCA+TGG + chr2_4:33033110-33033129 None:intergenic 15.0%
!!! CATGAAAATAATAATTTGTT+AGG - chr2_4:33033108-33033127 Msa0325510:CDS 15.0%
!! ACAAAATAAAATCTACAAAA+TGG + chr2_4:33033454-33033473 None:intergenic 15.0%
!!! TTCTTTTGTTTTTATTATTG+AGG - chr2_4:33033533-33033552 Msa0325510:intron 15.0%
!!! TCTTTTGTTTTTATTATTGA+GGG - chr2_4:33033534-33033553 Msa0325510:intron 15.0%
!!! TGATATGTTTTATTTTCAAA+AGG - chr2_4:33033722-33033741 Msa0325510:intron 15.0%
!!! GATATGTTTTATTTTCAAAA+GGG - chr2_4:33033723-33033742 Msa0325510:intron 15.0%
!!! GACACTATTTTATTTTATTT+TGG - chr2_4:33033827-33033846 Msa0325510:intron 15.0%
!!! ATGAAAATGTTTTTATCAAT+TGG + chr2_4:33034827-33034846 None:intergenic 15.0%
!! TTTCGAAAATATTTAAATTG+CGG + chr2_4:33035335-33035354 None:intergenic 15.0%
!!! TTGTAGCATATATTTAAAAT+AGG + chr2_4:33035434-33035453 None:intergenic 15.0%
!! TTATATGTTAAACAAAAAAC+AGG - chr2_4:33035495-33035514 Msa0325510:intron 15.0%
!! TATATGTTAAACAAAAAACA+GGG - chr2_4:33035496-33035515 Msa0325510:intron 15.0%
!!! TTCTCTAAAAATATTTGATT+TGG - chr2_4:33037070-33037089 Msa0325510:five_prime_UTR 15.0%
!!! TCTCTAAAAATATTTGATTT+GGG - chr2_4:33037071-33037090 Msa0325510:five_prime_UTR 15.0%
!! AAATAATAACAAGTTCTATA+TGG + chr2_4:33037152-33037171 None:intergenic 15.0%
!!! CTTTTGTTAATTGTTGAAAA+TGG - chr2_4:33031775-33031794 Msa0325510:three_prime_UTR 20.0%
!!! TTAAGCTTTAGTTAGTAATA+TGG + chr2_4:33031996-33032015 None:intergenic 20.0%
!!! ATTAATTAATGATGGGTATT+TGG - chr2_4:33032125-33032144 Msa0325510:CDS 20.0%
!!! TTAATTAATGATGGGTATTT+GGG - chr2_4:33032126-33032145 Msa0325510:CDS 20.0%
!! AGTTAGTTATATATTTCCTT+CGG - chr2_4:33032244-33032263 Msa0325510:CDS 20.0%
!! CATTGAATACCAAATATATT+TGG + chr2_4:33032329-33032348 None:intergenic 20.0%
!!! CAATTTTAAGTTGTTTCTAT+AGG - chr2_4:33032693-33032712 Msa0325510:intron 20.0%
!!! ATTTCCATATTTTTTCTTCT+TGG + chr2_4:33032766-33032785 None:intergenic 20.0%
!! ATTGTAATAAAAAACATCAG+TGG + chr2_4:33032825-33032844 None:intergenic 20.0%
!!! ATCATTTGAGTTAAGTTTAT+GGG + chr2_4:33033203-33033222 None:intergenic 20.0%
!!! TATCATTTGAGTTAAGTTTA+TGG + chr2_4:33033204-33033223 None:intergenic 20.0%
!!! AAGTTTTTTGTGTTTCTTTT+TGG + chr2_4:33033277-33033296 None:intergenic 20.0%
!! AATGGATAAATATTGTCTAA+CGG + chr2_4:33033615-33033634 None:intergenic 20.0%
!!! TGTTGGTAACAATTTTAAAA+TGG + chr2_4:33033633-33033652 None:intergenic 20.0%
!!! TAGTTTTGACACATTTATAT+TGG - chr2_4:33033853-33033872 Msa0325510:intron 20.0%
!! AACATGATTAAAATCATTCA+TGG - chr2_4:33034065-33034084 Msa0325510:intron 20.0%
!!! TTTGACAATTTGTTTATAAG+TGG + chr2_4:33034138-33034157 None:intergenic 20.0%
!! GAACTTATTAATTAAGTGAA+AGG - chr2_4:33034200-33034219 Msa0325510:CDS 20.0%
!!! TTAATTGATGTTGATAAATC+AGG - chr2_4:33034289-33034308 Msa0325510:CDS 20.0%
!!! ATTTATGTTGTTTATATGTC+AGG + chr2_4:33034697-33034716 None:intergenic 20.0%
!!! AAGAAGCTAAAGAAATTTTA+AGG - chr2_4:33035527-33035546 Msa0325510:intron 20.0%
!!! ACACTTAGTATTCTTTTTTT+TGG + chr2_4:33036249-33036268 None:intergenic 20.0%
!!! ACACTTAGTATTCTTTTTTT+TGG + chr2_4:33036249-33036268 None:intergenic 20.0%
!!! ATAGTATGGTTAATTTTGTA+AGG + chr2_4:33036388-33036407 None:intergenic 20.0%
!! TTATTAGAGTAATTCAATAC+TGG + chr2_4:33036433-33036452 None:intergenic 20.0%
!!! TTAGTATTGTTATTAGACAT+TGG + chr2_4:33036465-33036484 None:intergenic 20.0%
!! AAAAACAATGACAAAAACAA+TGG + chr2_4:33036842-33036861 None:intergenic 20.0%
! TGTTAATTGTTGAAAATGGA+AGG - chr2_4:33031779-33031798 Msa0325510:three_prime_UTR 25.0%
! GTATATAAGAGATGATTTCA+AGG - chr2_4:33032180-33032199 Msa0325510:CDS 25.0%
!! TTTTTCCCTATTAATGTGAT+TGG - chr2_4:33032353-33032372 Msa0325510:intron 25.0%
! TAACTCCAATCACATTAATA+GGG + chr2_4:33032361-33032380 None:intergenic 25.0%
!!! GTATCTTTATCCATTTTAGT+TGG - chr2_4:33032381-33032400 Msa0325510:intron 25.0%
!!! AATTTAACCATTAGCTTTGA+TGG - chr2_4:33032448-33032467 Msa0325510:intron 25.0%
! GGAATAGTTAGGATATATTA+TGG - chr2_4:33032469-33032488 Msa0325510:intron 25.0%
!!! AGATGCAATAAAGGTATTTT+TGG + chr2_4:33032581-33032600 None:intergenic 25.0%
! AAGGTAAAATGGTTATAAAG+GGG + chr2_4:33032623-33032642 None:intergenic 25.0%
! CAAGGTAAAATGGTTATAAA+GGG + chr2_4:33032624-33032643 None:intergenic 25.0%
!!! TAGTTTTTTATTGGCATCAA+TGG + chr2_4:33032647-33032666 None:intergenic 25.0%
!!! TGCTTGTGTTAGTTTTTTAT+TGG + chr2_4:33032656-33032675 None:intergenic 25.0%
! AAATTGAGAAAACTATCACA+AGG + chr2_4:33032679-33032698 None:intergenic 25.0%
! TATAATATACTGAATTGACC+AGG + chr2_4:33032728-33032747 None:intergenic 25.0%
! AAAGCCAAGAAGAAAAAATA+TGG - chr2_4:33032759-33032778 Msa0325510:CDS 25.0%
!! ACATTTTATAAACCAAGATG+TGG + chr2_4:33032930-33032949 None:intergenic 25.0%
!! TCATTTGAGTTAAGTTTATG+GGG + chr2_4:33033202-33033221 None:intergenic 25.0%
!!! TTTTTTGTGTTTCTTTTTGG+TGG + chr2_4:33033274-33033293 None:intergenic 25.0%
! TCACTTACTCAATCAAATAA+GGG - chr2_4:33033335-33033354 Msa0325510:intron 25.0%
! ACAAAATGGTTTGAGAAATA+AGG + chr2_4:33033440-33033459 None:intergenic 25.0%
!! TTTGATGTTCTGAATTTAGA+AGG + chr2_4:33033577-33033596 None:intergenic 25.0%
! TACCAACATAAATTATGTAG+TGG - chr2_4:33033645-33033664 Msa0325510:CDS 25.0%
!! TTTTGACACATTTATATTGG+AGG - chr2_4:33033856-33033875 Msa0325510:intron 25.0%
!!! GTTAGTTTTACCATCTAAAA+AGG + chr2_4:33034048-33034067 None:intergenic 25.0%
! ATTAAAATCATTCATGGACA+CGG - chr2_4:33034071-33034090 Msa0325510:intron 25.0%
! AGTGAAAGGTAAATAAGATA+AGG - chr2_4:33034214-33034233 Msa0325510:CDS 25.0%
!! GCTTAGTGTTAAACATATTT+TGG - chr2_4:33035024-33035043 Msa0325510:intron 25.0%
!!! TTGTTTGATATGATTTGTTC+AGG - chr2_4:33035123-33035142 Msa0325510:intron 25.0%
!!! TCATTCATAGCTCTAAATTT+CGG - chr2_4:33035290-33035309 Msa0325510:intron 25.0%
!! AGTTTTACTTAACTTCCATT+TGG - chr2_4:33035471-33035490 Msa0325510:intron 25.0%
! TGTTTAACATATAAGCCAAA+TGG + chr2_4:33035489-33035508 None:intergenic 25.0%
! ACTAAAAGAATCAGTTGAAA+TGG - chr2_4:33035591-33035610 Msa0325510:intron 25.0%
! ATATACTTTATCGATAAGAC+CGG - chr2_4:33035856-33035875 Msa0325510:intron 25.0%
! CACTTAGTATTCTATTTGAA+AGG + chr2_4:33036139-33036158 None:intergenic 25.0%
!!! CTTAGTATTCTTTTTTTTGG+TGG + chr2_4:33036246-33036265 None:intergenic 25.0%
!!! ACTAAGTGTTTTTTAACACT+CGG - chr2_4:33036260-33036279 Msa0325510:intron 25.0%
!!! CTTAGTATTCTTTTTTTTGG+TGG + chr2_4:33036246-33036265 None:intergenic 25.0%
!! TGGTTAGTTAACTAATAGTA+TGG + chr2_4:33036402-33036421 None:intergenic 25.0%
!! ATTCAATACTGGTTAATAAG+TGG + chr2_4:33036422-33036441 None:intergenic 25.0%
! ATATATCCATTAAGATACAG+AGG - chr2_4:33036685-33036704 Msa0325510:intron 25.0%
!!! GAACCTTGAATTTTAAGTTT+TGG - chr2_4:33036917-33036936 Msa0325510:CDS 25.0%
! TTGCCAAAACTTAAAATTCA+AGG + chr2_4:33036923-33036942 None:intergenic 25.0%
!!! TGAATTTTAAGTTTTGGCAA+AGG - chr2_4:33036923-33036942 Msa0325510:CDS 25.0%
! TGTAACAAGTTATTATGTGA+TGG - chr2_4:33037120-33037139 Msa0325510:five_prime_UTR 25.0%
! CTAGTCTCTTCTACATTTTA+TGG - chr2_4:33031689-33031708 Msa0325510:three_prime_UTR 30.0%
AGCAGTATATAAGAAACTGA+AGG + chr2_4:33031757-33031776 None:intergenic 30.0%
TAATTGTTGAAAATGGAAGG+AGG - chr2_4:33031782-33031801 Msa0325510:three_prime_UTR 30.0%
!! ACAATAAAAAGTGTTAGAGC+TGG - chr2_4:33032100-33032119 Msa0325510:CDS 30.0%
AGCTGGTGATTAATTAATGA+TGG - chr2_4:33032117-33032136 Msa0325510:CDS 30.0%
GCTGGTGATTAATTAATGAT+GGG - chr2_4:33032118-33032137 Msa0325510:CDS 30.0%
!!! TTTTTTATGAATGAGACCGA+AGG + chr2_4:33032263-33032282 None:intergenic 30.0%
CTAACTCCAATCACATTAAT+AGG + chr2_4:33032362-33032381 None:intergenic 30.0%
AACTATTCCATCAAAGCTAA+TGG + chr2_4:33032458-33032477 None:intergenic 30.0%
!! TTAGCTTTGATGGAATAGTT+AGG - chr2_4:33032458-33032477 Msa0325510:intron 30.0%
CATATAATAATCTCTCGAGT+CGG + chr2_4:33032551-33032570 None:intergenic 30.0%
GCAAGGTAAAATGGTTATAA+AGG + chr2_4:33032625-33032644 None:intergenic 30.0%
TTCTATAGGAAAACATAACC+TGG - chr2_4:33032707-33032726 Msa0325510:intron 30.0%
!!! AAACTTTTTCATCCACATCT+TGG - chr2_4:33032915-33032934 Msa0325510:CDS 30.0%
CAACATATATCATGTACTCA+TGG + chr2_4:33033027-33033046 None:intergenic 30.0%
CATGAGTACATGATATATGT+TGG - chr2_4:33033025-33033044 Msa0325510:CDS 30.0%
TACATGATATATGTTGGCAT+TGG - chr2_4:33033031-33033050 Msa0325510:CDS 30.0%
! TTCTTTGGTCTGTATTTTCA+AGG + chr2_4:33033063-33033082 None:intergenic 30.0%
TGTATAAGATATGCAAGATC+CGG - chr2_4:33033231-33033250 Msa0325510:CDS 30.0%
!!! TACGATAGTTTGCTTTTGTA+AGG - chr2_4:33033296-33033315 Msa0325510:CDS 30.0%
!!! ATAGTTTGCTTTTGTAAGGT+TGG - chr2_4:33033300-33033319 Msa0325510:CDS 30.0%
CTCACTTACTCAATCAAATA+AGG - chr2_4:33033334-33033353 Msa0325510:intron 30.0%
! TGTCTAACACCTTGAATTTT+TGG - chr2_4:33033376-33033395 Msa0325510:intron 30.0%
AACTATTGGCCAAAAATTCA+AGG + chr2_4:33033388-33033407 None:intergenic 30.0%
AAATATTGTCTAACGGTCTA+CGG + chr2_4:33033608-33033627 None:intergenic 30.0%
TGCCACTACATAATTTATGT+TGG + chr2_4:33033650-33033669 None:intergenic 30.0%
AAATTATGTAGTGGCAAAGA+TGG - chr2_4:33033654-33033673 Msa0325510:CDS 30.0%
AATTATGTAGTGGCAAAGAT+GGG - chr2_4:33033655-33033674 Msa0325510:CDS 30.0%
CACATTTATATTGGAGGAAT+AGG - chr2_4:33033862-33033881 Msa0325510:intron 30.0%
TTGGAGGAATAGGATTAATA+AGG - chr2_4:33033872-33033891 Msa0325510:intron 30.0%
AAAAATTACGCAAAAGTCGA+AGG - chr2_4:33033994-33034013 Msa0325510:intron 30.0%
TATTGTTATACATGATCGTC+AGG - chr2_4:33034105-33034124 Msa0325510:intron 30.0%
!! AAGCTTCTGAGATGTATAAA+GGG + chr2_4:33034529-33034548 None:intergenic 30.0%
TATGCAGTTCTCATTGTAAA+AGG + chr2_4:33034754-33034773 None:intergenic 30.0%
TATTTGTAGTGTGATTCGTA+TGG - chr2_4:33034772-33034791 Msa0325510:intron 30.0%
TGTTAGAATCAGCAATATCA+AGG + chr2_4:33034924-33034943 None:intergenic 30.0%
ACTATTTAGATCCTTCTAGA+AGG - chr2_4:33034967-33034986 Msa0325510:intron 30.0%
AATACGATTTGTGTTAAAGC+CGG + chr2_4:33035190-33035209 None:intergenic 30.0%
TTTCAAAAAGTGACGATGTT+AGG + chr2_4:33035265-33035284 None:intergenic 30.0%
ATTTCATCTTCAACATCTTG+TGG + chr2_4:33035565-33035584 None:intergenic 30.0%
CAAATCTTCCAACAATTTGT+TGG - chr2_4:33035709-33035728 Msa0325510:intron 30.0%
!! TGTTGATTCCAACAAATTGT+TGG + chr2_4:33035720-33035739 None:intergenic 30.0%
!!! CTTTTGTTGTTTAGTTTGTC+AGG - chr2_4:33035889-33035908 Msa0325510:intron 30.0%
GTTTCAATTTCACTAACCAT+AGG + chr2_4:33035973-33035992 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - chr2_4:33036198-33036217 Msa0325510:intron 30.0%
!!! AGTATTCTTTTTTTTGGTGG+TGG + chr2_4:33036243-33036262 None:intergenic 30.0%
!!! AGTATTCTTTTTTTTGGTGG+TGG + chr2_4:33036243-33036262 None:intergenic 30.0%
CATATTCCTCTGTATCTTAA+TGG + chr2_4:33036694-33036713 None:intergenic 30.0%
TTAAGATACAGAGGAATATG+TGG - chr2_4:33036694-33036713 Msa0325510:intron 30.0%
GAATAGCATCAACATCAAAT+TGG - chr2_4:33036719-33036738 Msa0325510:intron 30.0%
GAGAATGTTTGTCTCTATCA+TGG - chr2_4:33031834-33031853 Msa0325510:exon 35.0%
AAAGCAAGACGAAGAACATA+AGG + chr2_4:33031866-33031885 None:intergenic 35.0%
TTTCTCTTTGGCTATGATAC+TGG - chr2_4:33031905-33031924 Msa0325510:CDS 35.0%
TATATGCAGGAGTCATATCT+GGG - chr2_4:33032149-33032168 Msa0325510:CDS 35.0%
CATAGTGTGTCCAACTAAAA+TGG + chr2_4:33032394-33032413 None:intergenic 35.0%
CGAGTCGGATAATATTGTAT+CGG + chr2_4:33032536-33032555 None:intergenic 35.0%
! TTTTATTGGCATCAATGGCA+AGG + chr2_4:33032642-33032661 None:intergenic 35.0%
GTATAAGATATGCAAGATCC+GGG - chr2_4:33033232-33033251 Msa0325510:CDS 35.0%
TATAAGATATGCAAGATCCG+GGG - chr2_4:33033233-33033252 Msa0325510:CDS 35.0%
TACTCAATCAAATAAGGGTG+TGG - chr2_4:33033340-33033359 Msa0325510:intron 35.0%
! ATTCAAGGTGTTAGACAGTT+CGG + chr2_4:33033373-33033392 None:intergenic 35.0%
!!! ATTTTTGGCCAATAGTTGTG+TGG - chr2_4:33033391-33033410 Msa0325510:intron 35.0%
ATCTATGACCACACAACTAT+TGG + chr2_4:33033402-33033421 None:intergenic 35.0%
TACCATCTAAAAAGGCTTAG+CGG + chr2_4:33034040-33034059 None:intergenic 35.0%
AATCCAGCTATTCTCATTGT+TGG - chr2_4:33034458-33034477 Msa0325510:CDS 35.0%
! ATTGTTGGTAGAGTCTTTGT+TGG - chr2_4:33034473-33034492 Msa0325510:CDS 35.0%
!! AGCTTCTGAGATGTATAAAG+GGG + chr2_4:33034528-33034547 None:intergenic 35.0%
!! GAAGCTTCTGAGATGTATAA+AGG + chr2_4:33034530-33034549 None:intergenic 35.0%
!! CCAAGTTGATAACATAGGAA+AGG + chr2_4:33034616-33034635 None:intergenic 35.0%
CCTTTCCTATGTTATCAACT+TGG - chr2_4:33034613-33034632 Msa0325510:intron 35.0%
!! GAATGCCAAGTTGATAACAT+AGG + chr2_4:33034621-33034640 None:intergenic 35.0%
TTCTATTAGGTCACCTCAAT+CGG + chr2_4:33034799-33034818 None:intergenic 35.0%
TCAATTGGTCACCTTCTATT+AGG + chr2_4:33034812-33034831 None:intergenic 35.0%
AATCGACGTGAACTTTATCT+CGG - chr2_4:33034889-33034908 Msa0325510:intron 35.0%
! ATTTAGATCCTTCTAGAAGG+AGG - chr2_4:33034970-33034989 Msa0325510:intron 35.0%
ATGTTTAACACTAAGCCTGA+TGG + chr2_4:33035020-33035039 None:intergenic 35.0%
GTTTGAAGATGAATCGTCTT+TGG + chr2_4:33035620-33035639 None:intergenic 35.0%
AAAACCAAAACAGTGAGAAG+AGG - chr2_4:33035664-33035683 Msa0325510:intron 35.0%
! TAAACCTCTTCTCACTGTTT+TGG + chr2_4:33035671-33035690 None:intergenic 35.0%
AAAACCAGCTAATTGAACGA+TGG + chr2_4:33035764-33035783 None:intergenic 35.0%
TTCACTAACCATAGGAGAAT+GGG + chr2_4:33035965-33035984 None:intergenic 35.0%
TTTCACTAACCATAGGAGAA+TGG + chr2_4:33035966-33035985 None:intergenic 35.0%
CCAAAGCTGTTCTATAATCA+GGG + chr2_4:33036017-33036036 None:intergenic 35.0%
TCCAAAGCTGTTCTATAATC+AGG + chr2_4:33036018-33036037 None:intergenic 35.0%
GGATTGCATGAAATGTCTAA+AGG - chr2_4:33036050-33036069 Msa0325510:intron 35.0%
ATTATTGTGCAGCTATTACC+TGG - chr2_4:33036484-33036503 Msa0325510:intron 35.0%
TTATTGTGCAGCTATTACCT+GGG - chr2_4:33036485-33036504 Msa0325510:intron 35.0%
TTGATCTTCTGTTGTGTCAT+TGG + chr2_4:33036524-33036543 None:intergenic 35.0%
AAAAAGAGCAAAGTCGACAA+TGG - chr2_4:33036548-33036567 Msa0325510:intron 35.0%
ATTTCAGAGTTTACAACCCA+TGG + chr2_4:33036667-33036686 None:intergenic 35.0%
! CTATCATTGACTGATGCTAT+TGG - chr2_4:33036772-33036791 Msa0325510:intron 35.0%
!! TGTTTTTGTGCCAGAAACAA+AGG - chr2_4:33036855-33036874 Msa0325510:intron 35.0%
! GTTTTTGTGCCAGAAACAAA+GGG - chr2_4:33036856-33036875 Msa0325510:intron 35.0%
ATGTTCTCAACCTCTTCAAT+AGG + chr2_4:33036886-33036905 None:intergenic 35.0%
! TAGAAAGCGTGCTAGTCAAA+AGG + chr2_4:33031672-33031691 None:intergenic 40.0%
!! GGAATTGGTGGTTTTCTCTT+TGG - chr2_4:33031893-33031912 Msa0325510:CDS 40.0%
ATGGGTATTTGGGTATATGC+AGG - chr2_4:33032136-33032155 Msa0325510:CDS 40.0%
GTATATGCAGGAGTCATATC+TGG - chr2_4:33032148-33032167 Msa0325510:CDS 40.0%
ATATGCAGGAGTCATATCTG+GGG - chr2_4:33032150-33032169 Msa0325510:CDS 40.0%
AAGAGATGATTTCAAGGCTG+TGG - chr2_4:33032186-33032205 Msa0325510:CDS 40.0%
GTCGGATAATATTGTATCGG+AGG + chr2_4:33032533-33032552 None:intergenic 40.0%
GCATCAATGGCAAGGTAAAA+TGG + chr2_4:33032634-33032653 None:intergenic 40.0%
ATAAGATATGCAAGATCCGG+GGG - chr2_4:33033234-33033253 Msa0325510:CDS 40.0%
! TTCAAGGTGTTAGACAGTTC+GGG + chr2_4:33033372-33033391 None:intergenic 40.0%
! CTTTTGCATAAGATCAGCAG+AGG + chr2_4:33033789-33033808 None:intergenic 40.0%
!! GGATGGATTAACGATCGATT+TGG - chr2_4:33034365-33034384 Msa0325510:CDS 40.0%
!! GGATTAACGATCGATTTGGA+AGG - chr2_4:33034369-33034388 Msa0325510:CDS 40.0%
!! TTTCGTTGGCTCAGTTGTTA+TGG - chr2_4:33034424-33034443 Msa0325510:CDS 40.0%
CTACCAACAATGAGAATAGC+TGG + chr2_4:33034464-33034483 None:intergenic 40.0%
! CTCAATGGATTTCTCATCAC+TGG - chr2_4:33034581-33034600 Msa0325510:intron 40.0%
! AATGGATTTCTCATCACTGG+TGG - chr2_4:33034584-33034603 Msa0325510:intron 40.0%
GACACTGACGACATAGATAT+CGG + chr2_4:33034675-33034694 None:intergenic 40.0%
GATTGAGGTGACCTAATAGA+AGG - chr2_4:33034798-33034817 Msa0325510:intron 40.0%
AGGTGTGACTCATCATCTTA+GGG - chr2_4:33034990-33035009 Msa0325510:intron 40.0%
!! ATATGATTTGTTCAGGCACC+AGG - chr2_4:33035130-33035149 Msa0325510:intron 40.0%
CGACATCACAAACACAATTG+TGG - chr2_4:33035363-33035382 Msa0325510:intron 40.0%
AAACACAATTGTGGTCGCAT+CGG - chr2_4:33035372-33035391 Msa0325510:intron 40.0%
CATCTTCAACATCTTGTGGA+GGG + chr2_4:33035561-33035580 None:intergenic 40.0%
TCATCTTCAACATCTTGTGG+AGG + chr2_4:33035562-33035581 None:intergenic 40.0%
GTGAGAAGAGGTTTATATGC+AGG - chr2_4:33035676-33035695 Msa0325510:intron 40.0%
AAGAGGTTTATATGCAGGAG+TGG - chr2_4:33035681-33035700 Msa0325510:intron 40.0%
AGAGGTTTATATGCAGGAGT+GGG - chr2_4:33035682-33035701 Msa0325510:intron 40.0%
GGTTGGACTGTAGTACATTA+CGG + chr2_4:33035743-33035762 None:intergenic 40.0%
ACGGCTGGAATTAATGCATT+TGG - chr2_4:33035820-33035839 Msa0325510:intron 40.0%
ACTTTATCGATAAGACCGGA+AGG - chr2_4:33035860-33035879 Msa0325510:intron 40.0%
CAACAAAAGCTTCTTCCTTC+CGG + chr2_4:33035878-33035897 None:intergenic 40.0%
!! GAGAATGGGTTGTAGTTTGA+TGG + chr2_4:33035951-33035970 None:intergenic 40.0%
AACTACAACCCATTCTCCTA+TGG - chr2_4:33035954-33035973 Msa0325510:intron 40.0%
CCCTGATTATAGAACAGCTT+TGG - chr2_4:33036014-33036033 Msa0325510:intron 40.0%
GAAGCACAAAATCCACATTC+AGG + chr2_4:33036081-33036100 None:intergenic 40.0%
TTGTGCTTCTGCTGGTAATA+AGG - chr2_4:33036092-33036111 Msa0325510:intron 40.0%
AGTTAAGTTCACGAGTCATG+AGG + chr2_4:33036167-33036186 None:intergenic 40.0%
TGAACTTAACTCAGCTGGTA+AGG - chr2_4:33036176-33036195 Msa0325510:intron 40.0%
CATAATATATGCAAGGTCCG+AGG - chr2_4:33036205-33036224 Msa0325510:intron 40.0%
TATTGTGCAGCTATTACCTG+GGG - chr2_4:33036486-33036505 Msa0325510:intron 40.0%
AGAGGATGTCCAAGCAAAAA+TGG - chr2_4:33036577-33036596 Msa0325510:intron 40.0%
GATGTCCAAGCAAAAATGGT+TGG - chr2_4:33036581-33036600 Msa0325510:intron 40.0%
! AATGGTTGGCTAGCACTAAT+TGG - chr2_4:33036595-33036614 Msa0325510:intron 40.0%
TACATCCTATTCTTCTCACC+AGG - chr2_4:33036628-33036647 Msa0325510:CDS 40.0%
CTATTCTTCTCACCAGGAAT+GGG - chr2_4:33036634-33036653 Msa0325510:CDS 40.0%
AGATACAGAGGAATATGTGG+AGG - chr2_4:33036697-33036716 Msa0325510:intron 40.0%
! ATAGGAAGTCCCTTTGTTTC+TGG + chr2_4:33036868-33036887 None:intergenic 40.0%
AAAGGGACTTCCTATTGAAG+AGG - chr2_4:33036873-33036892 Msa0325510:intron 40.0%
TGAAGAGGTTGAGAACATGT+TGG - chr2_4:33036888-33036907 Msa0325510:intron 40.0%
ATGAGTTAGATGTTGCATGC+TGG - chr2_4:33037016-33037035 Msa0325510:CDS 40.0%
TAGATGTTGCATGCTGGATT+AGG - chr2_4:33037022-33037041 Msa0325510:CDS 40.0%
AAGCAGAGACATCAGCTTCA+GGG + chr2_4:33031811-33031830 None:intergenic 45.0%
AAAGCAGAGACATCAGCTTC+AGG + chr2_4:33031812-33031831 None:intergenic 45.0%
CTTGCTTTCTCTGCTGGAAT+TGG - chr2_4:33031878-33031897 Msa0325510:CDS 45.0%
AGGCTGTGGATAGACAAACT+TGG - chr2_4:33032200-33032219 Msa0325510:CDS 45.0%
! TGTATCGGAGGAAGCATGAT+TGG + chr2_4:33032521-33032540 None:intergenic 45.0%
! AGCAAGTGCTGTACTCACTA+TGG + chr2_4:33034318-33034337 None:intergenic 45.0%
ATAGTGAGTACAGCACTTGC+TGG - chr2_4:33034317-33034336 Msa0325510:CDS 45.0%
GCAATCATAGGTGCATCAGT+TGG - chr2_4:33034341-33034360 Msa0325510:CDS 45.0%
ATCATAGGTGCATCAGTTGG+TGG - chr2_4:33034344-33034363 Msa0325510:CDS 45.0%
!! GCAGATGCACTCTTTTTCGT+TGG - chr2_4:33034410-33034429 Msa0325510:CDS 45.0%
! GGTAGAGTCTTTGTTGGTCT+TGG - chr2_4:33034479-33034498 Msa0325510:CDS 45.0%
!! GTCTTTGTTGGTCTTGGTGT+TGG - chr2_4:33034485-33034504 Msa0325510:CDS 45.0%
!! TGTTGGTCTTGGTGTTGGAA+TGG - chr2_4:33034490-33034509 Msa0325510:CDS 45.0%
! TGGTGTTGGAATGGCTTCAA+TGG - chr2_4:33034499-33034518 Msa0325510:CDS 45.0%
! GGAGCTCTTGTTAGTCTCAA+TGG - chr2_4:33034566-33034585 Msa0325510:intron 45.0%
TGATTCGTATGGTCCGATTG+AGG - chr2_4:33034783-33034802 Msa0325510:intron 45.0%
GAGGTGTGACTCATCATCTT+AGG - chr2_4:33034989-33035008 Msa0325510:intron 45.0%
TCATCTTAGGGTGATCCATC+AGG - chr2_4:33035002-33035021 Msa0325510:intron 45.0%
ACAACCAACGAGGTGATTCT+GGG + chr2_4:33035225-33035244 None:intergenic 45.0%
AACAACCAACGAGGTGATTC+TGG + chr2_4:33035226-33035245 None:intergenic 45.0%
! ACCTCGTTGGTTGTTCAGAA+AGG - chr2_4:33035231-33035250 Msa0325510:intron 45.0%
ACCTTTCTGAACAACCAACG+AGG + chr2_4:33035235-33035254 None:intergenic 45.0%
CCAGCTAATTGAACGATGGT+TGG + chr2_4:33035760-33035779 None:intergenic 45.0%
CCAACCATCGTTCAATTAGC+TGG - chr2_4:33035757-33035776 Msa0325510:intron 45.0%
! ACTTCTTCTGTCGCTTGTCA+CGG - chr2_4:33035801-33035820 Msa0325510:intron 45.0%
!! AGCTTTGGATGCTGCTCAAT+GGG - chr2_4:33036029-33036048 Msa0325510:intron 45.0%
CTAAAGGCTTCTCCTGAATG+TGG - chr2_4:33036066-33036085 Msa0325510:intron 45.0%
! TGTGGATTTTGTGCTTCTGC+TGG - chr2_4:33036084-33036103 Msa0325510:intron 45.0%
ACTCGTGAACTTAACTCAGC+TGG - chr2_4:33036171-33036190 Msa0325510:intron 45.0%
AAGGTCCGAGGTTCAAATCT+CGG - chr2_4:33036217-33036236 Msa0325510:intron 45.0%
TTGGATATTAGACATGCCCC+AGG + chr2_4:33036505-33036524 None:intergenic 45.0%
AGTCGACAATGGTACACAAG+AGG - chr2_4:33036559-33036578 Msa0325510:intron 45.0%
!! GCTAGCCAACCATTTTTGCT+TGG + chr2_4:33036589-33036608 None:intergenic 45.0%
CCATTCCTGGTGAGAAGAAT+AGG + chr2_4:33036636-33036655 None:intergenic 45.0%
CCTATTCTTCTCACCAGGAA+TGG - chr2_4:33036633-33036652 Msa0325510:CDS 45.0%
!!! TATTTTTTTTTTTGTTTTAT+TGG + chr2_4:33031728-33031747 None:intergenic 5.0%
!!! TTATTTTTTATTTTATTCTT+TGG + chr2_4:33033078-33033097 None:intergenic 5.0%
!! TGTAATTATTAAAAATATAA+AGG + chr2_4:33033489-33033508 None:intergenic 5.0%
!!! TTTTTCAATATTTATTTTTT+TGG - chr2_4:33033923-33033942 Msa0325510:intron 5.0%
CTTCGTCTTGCTTTCTCTGC+TGG - chr2_4:33031872-33031891 Msa0325510:CDS 50.0%
GCTTTCTCTGCTGGAATTGG+TGG - chr2_4:33031881-33031900 Msa0325510:CDS 50.0%
GGATAGACAAACTTGGCTGC+AGG - chr2_4:33032207-33032226 Msa0325510:CDS 50.0%
GGTGTCTAAATTCGAACCCC+CGG + chr2_4:33033253-33033272 None:intergenic 50.0%
GGTGTTAGACAGTTCGGGAA+GGG + chr2_4:33033367-33033386 None:intergenic 50.0%
AGGTGTTAGACAGTTCGGGA+AGG + chr2_4:33033368-33033387 None:intergenic 50.0%
! CGCCGCTAAGCCTTTTTAGA+TGG - chr2_4:33034035-33034054 Msa0325510:intron 50.0%
! GCACTTGCTGGAGCAATCAT+AGG - chr2_4:33034329-33034348 Msa0325510:CDS 50.0%
!! TAGGTGCATCAGTTGGTGGA+TGG - chr2_4:33034348-33034367 Msa0325510:CDS 50.0%
GCTTCTCCAACTAGAGTTCG+TGG - chr2_4:33034545-33034564 Msa0325510:intron 50.0%
AGAGCTCCACGAACTCTAGT+TGG + chr2_4:33034554-33034573 None:intergenic 50.0%
GAGTCACACCTCCTTCTAGA+AGG + chr2_4:33034981-33035000 None:intergenic 50.0%
TTGTTCAGGCACCAGGAACA+TGG - chr2_4:33035137-33035156 Msa0325510:intron 50.0%
AACATCCACCTCCATGTTCC+TGG + chr2_4:33035151-33035170 None:intergenic 50.0%
GGAACATGGAGGTGGATGTT+AGG - chr2_4:33035151-33035170 Msa0325510:intron 50.0%
!! CAGCTTTGGATGCTGCTCAA+TGG - chr2_4:33036028-33036047 Msa0325510:intron 50.0%
TTCAGGCACCAGGAACATGG+AGG - chr2_4:33035140-33035159 Msa0325510:intron 55.0%
! GTTAGGCGTTGCAGCAGTAC+CGG - chr2_4:33035168-33035187 Msa0325510:intron 55.0%
TGCTCCCAGAATCACCTCGT+TGG - chr2_4:33035218-33035237 Msa0325510:intron 55.0%
GGTGGCCGAGATTTGAACCT+CGG + chr2_4:33036225-33036244 None:intergenic 55.0%
AGGCACCAGGAACATGGAGG+TGG - chr2_4:33035143-33035162 Msa0325510:intron 60.0%
! CTTCTGTCGCTTGTCACGGC+TGG - chr2_4:33035805-33035824 Msa0325510:intron 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 33031662 33037174 33031662 ID=Msa0325510;Name=Msa0325510
chr2_4 mRNA 33031662 33037174 33031662 ID=Msa0325510-mRNA-1;Parent=Msa0325510;Name=Msa0325510-mRNA-1;_AED=0.05;_eAED=0.05;_QI=132|1|1|1|1|1|6|181|580
chr2_4 exon 33031662 33032340 33031662 ID=Msa0325510-mRNA-1:exon:10705;Parent=Msa0325510-mRNA-1
chr2_4 exon 33032723 33033319 33032723 ID=Msa0325510-mRNA-1:exon:10704;Parent=Msa0325510-mRNA-1
chr2_4 exon 33033584 33033691 33033584 ID=Msa0325510-mRNA-1:exon:10703;Parent=Msa0325510-mRNA-1
chr2_4 exon 33034190 33034525 33034190 ID=Msa0325510-mRNA-1:exon:10702;Parent=Msa0325510-mRNA-1
chr2_4 exon 33036608 33036678 33036608 ID=Msa0325510-mRNA-1:exon:10701;Parent=Msa0325510-mRNA-1
chr2_4 exon 33036910 33037174 33036910 ID=Msa0325510-mRNA-1:exon:10700;Parent=Msa0325510-mRNA-1
chr2_4 five_prime_UTR 33037043 33037174 33037043 ID=Msa0325510-mRNA-1:five_prime_utr;Parent=Msa0325510-mRNA-1
chr2_4 CDS 33036910 33037042 33036910 ID=Msa0325510-mRNA-1:cds;Parent=Msa0325510-mRNA-1
chr2_4 CDS 33036608 33036678 33036608 ID=Msa0325510-mRNA-1:cds;Parent=Msa0325510-mRNA-1
chr2_4 CDS 33034190 33034525 33034190 ID=Msa0325510-mRNA-1:cds;Parent=Msa0325510-mRNA-1
chr2_4 CDS 33033584 33033691 33033584 ID=Msa0325510-mRNA-1:cds;Parent=Msa0325510-mRNA-1
chr2_4 CDS 33032723 33033319 33032723 ID=Msa0325510-mRNA-1:cds;Parent=Msa0325510-mRNA-1
chr2_4 CDS 33031843 33032340 33031843 ID=Msa0325510-mRNA-1:cds;Parent=Msa0325510-mRNA-1
chr2_4 three_prime_UTR 33031662 33031842 33031662 ID=Msa0325510-mRNA-1:three_prime_utr;Parent=Msa0325510-mRNA-1
Gene Sequence

>Msa0325510

ATGGAAGGAGGAGTCCCTGAAGCTGATGTCTCTGCTTTCAGAGAATGTTTGTCTCTATCATGGAAAAATCCTTATGTTCTTCGTCTTGCTTTCTCTGCTGGAATTGGTGGTTTTCTCTTTGGCTATGATACTGGAGTCATATCTGGGGCTCTTTTGTATATAAGAGATGATTTCAAGGCTGTGGATAGACAAACTTGGCTGCAGGAAGCCATAGTGAGTACAGCACTTGCTGGAGCAATCATAGGTGCATCAGTTGGTGGATGGATTAACGATCGATTTGGAAGGAAAAAAGCAATAATTCTTGCAGATGCACTCTTTTTCGTTGGCTCAGTTGTTATGGCTGCTGCAATCAATCCAGCTATTCTCATTGTTGGTAGAGTCTTTGTTGGTCTTGGTGTTGGAATGGCTTCAATGGCTTCCCCTTTATACATCTCAGAAGCTTCTCCAACTAGAGTTCGTGGAGCTCTTGTTAGTCTCAATGGATTTCTCATCACTGGTGGACAATTCCTTTCCTATGTTATCAACTTGGCATTCACAAATGCACCAGGAACATGGAGGTGGATGTTAGGCGTTGCAGCAGTACCGGCTTTAACACAAATCGTATTGATGCTTATGCTCCCAGAATCACCTCGTTGGTTGTTCAGAAAGGGAAAAGAAGAAGAAGCTAAAGAAATTTTAAGGAAGATATACCCTCCACAAGATGTTGAAGATGAAATCATTGCACTAAAAGAATCAGTTGAAATGGAAACCAAAGACGATTCATCTTCAAACAAAGTCAGCATAATCAAACTTTTGAAAACCAAAACAGTGAGAAGAGGTTTATATGCAGGAGTGGGACTACAAATCTTCCAACAATTTGTTGGAATCAACACCGTAATGTACTACAGTCCAACCATCGTTCAATTAGCTGGTTTTGCATCAAACAAAACAGCACTTCTTCTGTCGCTTGTCACGGCTGGAATTAATGCATTTGGTTCGATTTTGAGCATATACTTTATCGATAAGACCGGAAGGAAGAAGCTTTTGTTGTTTAGTTTGTCAGGTGTTATCATCTCTCTTGTCGTTTTGACTGTTGTGTTCCATCAAACTACAACCCATTCTCCTATGGTTAGTGAAATTGAAACTTCTAAGTTCAATACTACTTGCCCTGATTATAGAACAGCTTTGGATGCTGCTCAATGGGATTGCATGAAATGTCTAAAGGCTTCTCCTGAATGTGGATTTTGTGCTTCTGCTGGTAATAAGCTATTACCTGGGGCATGTCTAATATCCAATGACACAACAGAAGATCAATGTCAAAAAGAGCAAAGTCGACAATGGTACACAAGAGGATGTCCAAGCAAAAATGGTTGGCTAGCACTAATTGGTCTTTCACTATACATCCTATTCTTCTCACCAGGAATGGGAACAGTTCCATGGGTTGTAAACTCTGAAATATATCCATTAAGATACAGAGGAATATGTGGAGGAATAGCATCAACATCAAATTGGATTTCAAATCTCATTGTTGCACAATCTTTTCTATCATTGACTGATGCTATTGGAACTTCATACACATTCATGATATTCATTTTCATCACTGTTGCTGCCATTGTTTTTGTCATTGTTTTTGTGCCAGAAACAAAGGGACTTCCTATTGAAGAGGTTGAGAACATGTTGGAAAGAAGAACCTTGAATTTTAAGTTTTGGCAAAGGAATTCTGACTCTGATCAAGCATTGACTCAAAAGAATGTGTCATTTTGA
Protein sequence

>Msa0325510

MEGGVPEADVSAFRECLSLSWKNPYVLRLAFSAGIGGFLFGYDTGVISGALLYIRDDFKAVDRQTWLQEAIVSTALAGAIIGASVGGWINDRFGRKKAIILADALFFVGSVVMAAAINPAILIVGRVFVGLGVGMASMASPLYISEASPTRVRGALVSLNGFLITGGQFLSYVINLAFTNAPGTWRWMLGVAAVPALTQIVLMLMLPESPRWLFRKGKEEEAKEILRKIYPPQDVEDEIIALKESVEMETKDDSSSNKVSIIKLLKTKTVRRGLYAGVGLQIFQQFVGINTVMYYSPTIVQLAGFASNKTALLLSLVTAGINAFGSILSIYFIDKTGRKKLLLFSLSGVIISLVVLTVVFHQTTTHSPMVSEIETSKFNTTCPDYRTALDAAQWDCMKCLKASPECGFCASAGNKLLPGACLISNDTTEDQCQKEQSRQWYTRGCPSKNGWLALIGLSLYILFFSPGMGTVPWVVNSEIYPLRYRGICGGIASTSNWISNLIVAQSFLSLTDAIGTSYTFMIFIFITVAAIVFVIVFVPETKGLPIEEVENMLERRTLNFKFWQRNSDSDQALTQKNVSF*