Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1053990 | XP_003622019.1 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 784 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1053990 | sp|Q10DV7|ACT1_ORYSJ | 97.613 | 377 | 9 | 0 | 1 | 377 | 1 | 377 | 0.0 | 771 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1053990 | A0A2Z6LUH8 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 784 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020320 | Msa1053990 | -0.817175 | 3.779294e-52 | -8.615850e-47 |
| Msa0021980 | Msa1053990 | -0.820300 | 7.375763e-53 | -8.615850e-47 |
| Msa0037220 | Msa1053990 | 0.810399 | 1.175313e-50 | -8.615850e-47 |
| Msa0049330 | Msa1053990 | -0.835358 | 1.757562e-56 | -8.615850e-47 |
| Msa0085030 | Msa1053990 | 0.810365 | 1.195344e-50 | -8.615850e-47 |
| Msa0089080 | Msa1053990 | 0.824281 | 8.789755e-54 | -8.615850e-47 |
| Msa0633720 | Msa1053990 | -0.811411 | 7.096642e-51 | -8.615850e-47 |
| Msa0639030 | Msa1053990 | -0.800540 | 1.373982e-48 | -8.615850e-47 |
| Msa0643020 | Msa1053990 | 0.826641 | 2.426945e-54 | -8.615850e-47 |
| Msa0656270 | Msa1053990 | -0.803759 | 2.990490e-49 | -8.615850e-47 |
| Msa0661890 | Msa1053990 | -0.804573 | 2.024821e-49 | -8.615850e-47 |
| Msa0667070 | Msa1053990 | 0.804719 | 1.887703e-49 | -8.615850e-47 |
| Msa0679720 | Msa1053990 | 0.834122 | 3.597393e-56 | -8.615850e-47 |
| Msa0679780 | Msa1053990 | -0.813741 | 2.195136e-51 | -8.615850e-47 |
| Msa0682730 | Msa1053990 | 0.888755 | 4.456588e-73 | -8.615850e-47 |
| Msa0693400 | Msa1053990 | -0.804357 | 2.245510e-49 | -8.615850e-47 |
| Msa0697600 | Msa1053990 | -0.823160 | 1.608718e-53 | -8.615850e-47 |
| Msa0704550 | Msa1053990 | 0.822245 | 2.625865e-53 | -8.615850e-47 |
| Msa0715510 | Msa1053990 | 0.830170 | 3.415015e-55 | -8.615850e-47 |
| Msa0722930 | Msa1053990 | -0.827616 | 1.418212e-54 | -8.615850e-47 |
| Msa0723140 | Msa1053990 | -0.817929 | 2.555170e-52 | -8.615850e-47 |
| Msa0732200 | Msa1053990 | -0.807249 | 5.544076e-50 | -8.615850e-47 |
| Msa0773260 | Msa1053990 | -0.800067 | 1.714543e-48 | -8.615850e-47 |
| Msa0773290 | Msa1053990 | -0.804754 | 1.856059e-49 | -8.615850e-47 |
| Msa0782030 | Msa1053990 | -0.802166 | 6.381755e-49 | -8.615850e-47 |
| Msa0796460 | Msa1053990 | -0.824267 | 8.855536e-54 | -8.615850e-47 |
| Msa0810590 | Msa1053990 | -0.808310 | 3.297804e-50 | -8.615850e-47 |
| Msa0835550 | Msa1053990 | -0.805549 | 1.265418e-49 | -8.615850e-47 |
| Msa0135890 | Msa1053990 | 0.830481 | 2.866663e-55 | -8.615850e-47 |
| Msa0143280 | Msa1053990 | -0.816891 | 4.376313e-52 | -8.615850e-47 |
| Msa0158610 | Msa1053990 | -0.808314 | 3.291707e-50 | -8.615850e-47 |
| Msa0183700 | Msa1053990 | 0.815709 | 8.046542e-52 | -8.615850e-47 |
| Msa0198440 | Msa1053990 | -0.831254 | 1.852430e-55 | -8.615850e-47 |
| Msa0199720 | Msa1053990 | 0.829475 | 5.043334e-55 | -8.615850e-47 |
| Msa0200840 | Msa1053990 | -0.829363 | 5.366966e-55 | -8.615850e-47 |
| Msa0200870 | Msa1053990 | -0.840634 | 7.728675e-58 | -8.615850e-47 |
| Msa0216550 | Msa1053990 | -0.840044 | 1.101789e-57 | -8.615850e-47 |
| Msa0225880 | Msa1053990 | -0.827990 | 1.152982e-54 | -8.615850e-47 |
| Msa0378670 | Msa1053990 | -0.807423 | 5.092425e-50 | -8.615850e-47 |
| Msa0378700 | Msa1053990 | -0.818182 | 2.239697e-52 | -8.615850e-47 |
| Msa0389050 | Msa1053990 | -0.801824 | 7.502550e-49 | -8.615850e-47 |
| Msa0411000 | Msa1053990 | -0.819907 | 9.073938e-53 | -8.615850e-47 |
| Msa0437540 | Msa1053990 | 0.825874 | 3.695022e-54 | -8.615850e-47 |
| Msa0454940 | Msa1053990 | -0.820211 | 7.731191e-53 | -8.615850e-47 |
| Msa0455230 | Msa1053990 | -0.801537 | 8.594019e-49 | -8.615850e-47 |
| Msa0462980 | Msa1053990 | 0.817291 | 3.559445e-52 | -8.615850e-47 |
| Msa0984860 | Msa1053990 | -0.817236 | 3.662146e-52 | -8.615850e-47 |
| Msa0995220 | Msa1053990 | -0.822611 | 2.158818e-53 | -8.615850e-47 |
| Msa0999590 | Msa1053990 | -0.827318 | 1.671235e-54 | -8.615850e-47 |
| Msa1012520 | Msa1053990 | 0.942884 | 3.253701e-102 | -8.615850e-47 |
| Msa1038110 | Msa1053990 | -0.803484 | 3.409612e-49 | -8.615850e-47 |
| Msa1040730 | Msa1053990 | 0.841539 | 4.469633e-58 | -8.615850e-47 |
| Msa1053990 | Msa1080790 | -0.809833 | 1.556006e-50 | -8.615850e-47 |
| Msa1053990 | Msa1108540 | 0.808479 | 3.034678e-50 | -8.615850e-47 |
| Msa1053990 | Msa1118930 | -0.804672 | 1.930463e-49 | -8.615850e-47 |
| Msa1053990 | Msa1125450 | -0.829849 | 4.089863e-55 | -8.615850e-47 |
| Msa1053990 | Msa1141250 | 0.887776 | 1.059811e-72 | -8.615850e-47 |
| Msa1053990 | Msa1164570 | -0.826815 | 2.205807e-54 | -8.615850e-47 |
| Msa1053990 | Msa1211260 | -0.814871 | 1.235376e-51 | -8.615850e-47 |
| Msa1053990 | Msa1211300 | -0.840696 | 7.444204e-58 | -8.615850e-47 |
| Msa1053990 | Msa1211390 | -0.869397 | 3.192874e-66 | -8.615850e-47 |
| Msa1053990 | Msa1216600 | 0.809197 | 2.131312e-50 | -8.615850e-47 |
| Msa1053990 | Msa1229770 | -0.804326 | 2.279533e-49 | -8.615850e-47 |
| Msa1053990 | Msa1237260 | -0.850843 | 1.306638e-60 | -8.615850e-47 |
| Msa1053990 | Msa1238370 | -0.807076 | 6.030071e-50 | -8.615850e-47 |
| Msa1053990 | Msa1240060 | 0.867152 | 1.688629e-65 | -8.615850e-47 |
| Msa1053990 | Msa1245120 | 0.844882 | 5.742046e-59 | -8.615850e-47 |
| Msa1053990 | Msa1281370 | 0.862828 | 3.844635e-64 | -8.615850e-47 |
| Msa1053990 | Msa1317710 | -0.812916 | 3.332432e-51 | -8.615850e-47 |
| Msa1053990 | Msa1320530 | 0.878046 | 3.855627e-69 | -8.615850e-47 |
| Msa1053990 | Msa1353280 | -0.813275 | 2.778909e-51 | -8.615850e-47 |
| Msa1053990 | Msa1370630 | -0.823422 | 1.397366e-53 | -8.615850e-47 |
| Msa1053990 | Msa1380490 | 0.810006 | 1.428348e-50 | -8.615850e-47 |
| Msa1053990 | Msa1386250 | -0.825080 | 5.695478e-54 | -8.615850e-47 |
| Msa1053990 | Msa1388520 | -0.822671 | 2.090767e-53 | -8.615850e-47 |
| Msa1053990 | Msa1389350 | 0.811258 | 7.660821e-51 | -8.615850e-47 |
| Msa1053990 | Msa1401000 | -0.800993 | 1.110312e-48 | -8.615850e-47 |
| Msa1053990 | Msa1407670 | 0.817080 | 3.969504e-52 | -8.615850e-47 |
| Msa1053990 | Msa1413900 | -0.849163 | 3.856659e-60 | -8.615850e-47 |
| Msa1053990 | Msa1415270 | -0.805965 | 1.034703e-49 | -8.615850e-47 |
| Msa1053990 | Msa1417950 | 0.810849 | 9.392691e-51 | -8.615850e-47 |
| Msa1053990 | Msa1449770 | 0.814259 | 1.687712e-51 | -8.615850e-47 |
| Msa1053990 | Msa1460310 | 0.813233 | 2.839786e-51 | -8.615850e-47 |
| Msa1053990 | Msa1460970 | 0.848191 | 7.171083e-60 | -8.615850e-47 |
| Msa0242260 | Msa1053990 | 0.833952 | 3.967941e-56 | -8.615850e-47 |
| Msa0243470 | Msa1053990 | -0.843018 | 1.812935e-58 | -8.615850e-47 |
| Msa0260470 | Msa1053990 | -0.825196 | 5.347467e-54 | -8.615850e-47 |
| Msa0264940 | Msa1053990 | 0.812542 | 4.022463e-51 | -8.615850e-47 |
| Msa0265210 | Msa1053990 | -0.802793 | 4.740279e-49 | -8.615850e-47 |
| Msa0265980 | Msa1053990 | 0.837363 | 5.434391e-57 | -8.615850e-47 |
| Msa0278670 | Msa1053990 | -0.834846 | 2.366454e-56 | -8.615850e-47 |
| Msa0280470 | Msa1053990 | 0.800892 | 1.164204e-48 | -8.615850e-47 |
| Msa0281940 | Msa1053990 | -0.818027 | 2.427790e-52 | -8.615850e-47 |
| Msa0295850 | Msa1053990 | -0.837375 | 5.396015e-57 | -8.615850e-47 |
| Msa0302990 | Msa1053990 | 0.814225 | 1.716934e-51 | -8.615850e-47 |
| Msa0303200 | Msa1053990 | -0.810974 | 8.824627e-51 | -8.615850e-47 |
| Msa0304110 | Msa1053990 | -0.828569 | 8.358430e-55 | -8.615850e-47 |
| Msa0318070 | Msa1053990 | -0.828341 | 9.487575e-55 | -8.615850e-47 |
| Msa0319690 | Msa1053990 | 0.864747 | 9.733705e-65 | -8.615850e-47 |
| Msa0339560 | Msa1053990 | -0.801636 | 8.201653e-49 | -8.615850e-47 |
| Msa0341190 | Msa1053990 | -0.831148 | 1.966718e-55 | -8.615850e-47 |
| Msa0362430 | Msa1053990 | -0.816423 | 5.573437e-52 | -8.615850e-47 |
| Msa0502910 | Msa1053990 | -0.806238 | 9.062150e-50 | -8.615850e-47 |
| Msa0508580 | Msa1053990 | 0.839228 | 1.796624e-57 | -8.615850e-47 |
| Msa0521940 | Msa1053990 | 0.801978 | 6.976021e-49 | -8.615850e-47 |
| Msa0545230 | Msa1053990 | -0.821143 | 4.721381e-53 | -8.615850e-47 |
| Msa0546370 | Msa1053990 | -0.806656 | 7.400098e-50 | -8.615850e-47 |
| Msa0554440 | Msa1053990 | -0.807020 | 6.199047e-50 | -8.615850e-47 |
| Msa0560370 | Msa1053990 | -0.801217 | 9.993505e-49 | -8.615850e-47 |
| Msa0600820 | Msa1053990 | -0.803220 | 3.867965e-49 | -8.615850e-47 |
| Msa0601920 | Msa1053990 | 0.852889 | 3.431997e-61 | -8.615850e-47 |
| Msa0871310 | Msa1053990 | -0.824153 | 9.415339e-54 | -8.615850e-47 |
| Msa0879650 | Msa1053990 | -0.800171 | 1.633187e-48 | -8.615850e-47 |
| Msa0883670 | Msa1053990 | -0.804872 | 1.753452e-49 | -8.615850e-47 |
| Msa0899730 | Msa1053990 | -0.863152 | 3.051391e-64 | -8.615850e-47 |
| Msa0964650 | Msa1053990 | -0.829844 | 4.101004e-55 | -8.615850e-47 |
| Msa0975560 | Msa1053990 | -0.805318 | 1.414298e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1053990 | MtrunA17_Chr7g0223901 | 100.000 | 377 | 0 | 0 | 1 | 377 | 1 | 377 | 0.0 | 784 |
| Msa1053990 | MtrunA17_Chr6g0448881 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 769 |
| Msa1053990 | MtrunA17_Chr2g0328091 | 97.082 | 377 | 11 | 0 | 1 | 377 | 1 | 377 | 0.0 | 768 |
| Msa1053990 | MtrunA17_Chr1g0175391 | 97.613 | 377 | 9 | 0 | 1 | 377 | 1 | 377 | 0.0 | 768 |
| Msa1053990 | MtrunA17_Chr3g0129641 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| Msa1053990 | MtrunA17_Chr7g0258721 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 761 |
| Msa1053990 | MtrunA17_Chr2g0278591 | 93.899 | 377 | 23 | 0 | 1 | 377 | 1 | 377 | 0.0 | 751 |
| Msa1053990 | MtrunA17_Chr7g0224401 | 43.272 | 379 | 201 | 3 | 10 | 374 | 7 | 385 | 2.36e-120 | 353 |
| Msa1053990 | MtrunA17_Chr5g0427591 | 37.220 | 446 | 207 | 11 | 1 | 376 | 1 | 443 | 2.52e-91 | 281 |
| Msa1053990 | MtrunA17_Chr8g0361001 | 37.220 | 446 | 207 | 11 | 1 | 376 | 1 | 443 | 3.10e-91 | 281 |
| Msa1053990 | MtrunA17_Chr8g0381261 | 34.550 | 411 | 219 | 8 | 10 | 372 | 10 | 418 | 1.46e-72 | 232 |
| Msa1053990 | MtrunA17_Chr3g0089031 | 38.158 | 380 | 209 | 9 | 7 | 377 | 1 | 363 | 2.44e-70 | 224 |
| Msa1053990 | MtrunA17_Chr2g0305361 | 28.802 | 434 | 243 | 8 | 8 | 377 | 6 | 437 | 5.32e-59 | 197 |
| Msa1053990 | MtrunA17_Chr3g0080021 | 31.313 | 297 | 180 | 9 | 91 | 371 | 179 | 467 | 3.77e-42 | 153 |
| Msa1053990 | MtrunA17_Chr8g0369101 | 31.741 | 293 | 173 | 10 | 91 | 366 | 187 | 469 | 1.09e-37 | 141 |
| Msa1053990 | MtrunA17_Chr3g0111971 | 29.365 | 252 | 159 | 7 | 9 | 245 | 21 | 268 | 3.21e-23 | 101 |
| Msa1053990 | MtrunA17_Chr3g0111971 | 33.607 | 122 | 78 | 2 | 250 | 368 | 586 | 707 | 1.97e-15 | 77.8 |
| Msa1053990 | MtrunA17_Chr8g0336071 | 40.000 | 95 | 57 | 0 | 105 | 199 | 1 | 95 | 5.17e-19 | 81.3 |
| Msa1053990 | MtrunA17_Chr8g0336061 | 40.217 | 92 | 42 | 1 | 241 | 319 | 12 | 103 | 3.16e-18 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1053990 | AT3G12110.1 | 97.613 | 377 | 9 | 0 | 1 | 377 | 1 | 377 | 0.0 | 770 |
| Msa1053990 | AT3G53750.1 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| Msa1053990 | AT3G53750.2 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| Msa1053990 | AT2G37620.1 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| Msa1053990 | AT2G37620.3 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| Msa1053990 | AT2G37620.2 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| Msa1053990 | AT2G37620.4 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 762 |
| Msa1053990 | AT3G46520.2 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 758 |
| Msa1053990 | AT3G46520.1 | 96.286 | 377 | 14 | 0 | 1 | 377 | 1 | 377 | 0.0 | 758 |
| Msa1053990 | AT5G09810.1 | 95.225 | 377 | 18 | 0 | 1 | 377 | 1 | 377 | 0.0 | 756 |
| Msa1053990 | AT5G59370.2 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 756 |
| Msa1053990 | AT5G59370.1 | 96.021 | 377 | 15 | 0 | 1 | 377 | 1 | 377 | 0.0 | 756 |
| Msa1053990 | AT1G49240.1 | 92.042 | 377 | 30 | 0 | 1 | 377 | 1 | 377 | 0.0 | 744 |
| Msa1053990 | AT3G18780.2 | 91.777 | 377 | 31 | 0 | 1 | 377 | 1 | 377 | 0.0 | 742 |
| Msa1053990 | AT3G18780.3 | 91.777 | 377 | 31 | 0 | 1 | 377 | 1 | 377 | 0.0 | 742 |
| Msa1053990 | AT3G18780.1 | 91.643 | 359 | 30 | 0 | 1 | 359 | 1 | 359 | 0.0 | 702 |
| Msa1053990 | AT2G42100.1 | 84.783 | 368 | 56 | 0 | 10 | 377 | 11 | 378 | 0.0 | 677 |
| Msa1053990 | AT2G42090.1 | 70.541 | 370 | 104 | 1 | 7 | 376 | 1 | 365 | 0.0 | 568 |
| Msa1053990 | AT2G42170.1 | 78.012 | 332 | 70 | 1 | 46 | 377 | 1 | 329 | 0.0 | 559 |
| Msa1053990 | AT2G42170.3 | 78.012 | 332 | 70 | 1 | 46 | 377 | 1 | 329 | 0.0 | 559 |
| Msa1053990 | AT2G42170.4 | 77.885 | 312 | 66 | 1 | 46 | 357 | 1 | 309 | 0.0 | 522 |
| Msa1053990 | AT2G42170.2 | 77.885 | 312 | 66 | 1 | 46 | 357 | 1 | 309 | 0.0 | 522 |
| Msa1053990 | AT2G42170.5 | 78.319 | 226 | 46 | 1 | 152 | 377 | 9 | 231 | 4.83e-132 | 377 |
| Msa1053990 | AT3G27000.1 | 43.536 | 379 | 200 | 3 | 10 | 374 | 7 | 385 | 1.05e-121 | 357 |
| Msa1053990 | AT1G18450.1 | 37.020 | 443 | 209 | 9 | 1 | 376 | 1 | 440 | 1.07e-93 | 287 |
| Msa1053990 | AT1G13180.1 | 34.223 | 412 | 219 | 9 | 10 | 372 | 9 | 417 | 1.14e-72 | 233 |
| Msa1053990 | AT3G60830.1 | 37.731 | 379 | 212 | 9 | 7 | 377 | 1 | 363 | 1.09e-67 | 218 |
| Msa1053990 | AT3G33520.1 | 30.879 | 421 | 233 | 7 | 10 | 377 | 5 | 420 | 4.95e-61 | 202 |
| Msa1053990 | AT5G56180.3 | 32.394 | 284 | 167 | 9 | 91 | 358 | 50 | 324 | 6.11e-37 | 137 |
| Msa1053990 | AT5G56180.1 | 32.394 | 284 | 167 | 9 | 91 | 358 | 182 | 456 | 3.44e-36 | 137 |
| Msa1053990 | AT3G12380.2 | 31.008 | 258 | 153 | 9 | 9 | 245 | 21 | 274 | 3.70e-26 | 110 |
| Msa1053990 | AT3G12380.2 | 33.103 | 145 | 93 | 2 | 228 | 368 | 572 | 716 | 4.74e-16 | 80.5 |
| Msa1053990 | AT3G12380.1 | 30.859 | 256 | 150 | 9 | 9 | 245 | 21 | 268 | 1.91e-25 | 108 |
| Msa1053990 | AT3G12380.1 | 33.103 | 145 | 93 | 2 | 228 | 368 | 566 | 710 | 4.99e-16 | 80.1 |
| Msa1053990 | AT1G73910.1 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.26e-23 | 95.1 |
| Msa1053990 | AT1G73910.2 | 35.862 | 145 | 74 | 3 | 1 | 129 | 1 | 142 | 2.26e-23 | 95.1 |
| Msa1053990 | AT5G56180.2 | 33.663 | 202 | 111 | 8 | 91 | 281 | 182 | 371 | 6.24e-21 | 93.6 |
| Msa1053990 | AT1G73910.3 | 29.268 | 123 | 71 | 2 | 1 | 107 | 1 | 123 | 2.56e-12 | 65.1 |
Find 137 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACGGTAACATTGTGCTTTC+AGG | 0.144297 | 7_2:+24888915 | Msa1053990:CDS |
| AAAAGCACTGGGTGTTCTTC+TGG | 0.181767 | 7_2:-24887876 | None:intergenic |
| GCAAGTAATAATGAATTTAA+AGG | 0.212619 | 7_2:-24889800 | None:intergenic |
| CATTCTGCGTATGAATTAAC+TGG | 0.215336 | 7_2:+24889939 | Msa1053990:three_prime_UTR |
| GAGGAAATGAAAATGGAAAA+TGG | 0.233782 | 7_2:-24885427 | None:intergenic |
| TGCTATGTATGTTGCTATTC+AGG | 0.269599 | 7_2:+24887974 | Msa1053990:CDS |
| GCAGGTATTGTGTTGGATTC+TGG | 0.277388 | 7_2:+24888480 | Msa1053990:intron |
| CACTTTCTGTGGACAATTGA+TGG | 0.320963 | 7_2:-24889682 | None:intergenic |
| GCTACAAGTTGCAATGCTTC+TGG | 0.324092 | 7_2:-24889774 | None:intergenic |
| ACCTTGATCTTCATGCTACT+TGG | 0.331858 | 7_2:-24888999 | None:intergenic |
| CTCATTCTGTCAGCAATGCC+TGG | 0.344924 | 7_2:-24888954 | None:intergenic |
| ATCTTCTCACGATTGGCCTT+AGG | 0.347633 | 7_2:-24887918 | None:intergenic |
| GCTGTGTTTCCCAGCATTGT+AGG | 0.369101 | 7_2:+24887669 | Msa1053990:CDS |
| GAGCAAGGAAATTTCTGCTT+TGG | 0.374975 | 7_2:+24888974 | Msa1053990:CDS |
| AACATGGAATCGTTAGCAAC+TGG | 0.386131 | 7_2:+24887799 | Msa1053990:CDS |
| GCTTCCATTCCTATCATAGA+TGG | 0.387544 | 7_2:-24888825 | None:intergenic |
| AGGGCATAACCCTCGTAGAT+AGG | 0.389103 | 7_2:-24888525 | None:intergenic |
| CCTTGATCTTCATGCTACTT+GGG | 0.389144 | 7_2:-24888998 | None:intergenic |
| AAAGCACTGGGTGTTCTTCT+GGG | 0.391378 | 7_2:-24887875 | None:intergenic |
| AGGAAATGAAAATGGAAAAT+GGG | 0.391585 | 7_2:-24885426 | None:intergenic |
| CTTGTTTGTGACAATGGAAC+TGG | 0.397675 | 7_2:+24887073 | Msa1053990:CDS |
| CAAGTAATAATGAATTTAAA+GGG | 0.399404 | 7_2:-24889799 | None:intergenic |
| CTGAGAGAAAATACAGTGTC+TGG | 0.408420 | 7_2:+24889033 | Msa1053990:CDS |
| TCTTCTCACGATTGGCCTTA+GGG | 0.411910 | 7_2:-24887917 | None:intergenic |
| CAAAATCTTCATCAAGAAAT+CGG | 0.413590 | 7_2:-24888592 | None:intergenic |
| TGAGAGAAGAGGGTTATTGA+AGG | 0.414923 | 7_2:+24889728 | Msa1053990:three_prime_UTR |
| TGCCATCCTTCGTCTTGATC+TGG | 0.418422 | 7_2:+24888554 | Msa1053990:CDS |
| CTGGATTGGAGGTTCCATCT+TGG | 0.418962 | 7_2:+24889052 | Msa1053990:CDS |
| CTGTTCCAACCATCTATGAT+AGG | 0.420168 | 7_2:+24888816 | Msa1053990:CDS |
| TGAAGTGCGATGTTGATATC+AGG | 0.420318 | 7_2:+24888883 | Msa1053990:CDS |
| GGGACGACATGGAAAAGATT+TGG | 0.423131 | 7_2:+24887820 | Msa1053990:CDS |
| CTAACGATTCCATGTTCAAT+GGG | 0.426897 | 7_2:-24887792 | None:intergenic |
| CATGTTATTATTCTAAATGT+TGG | 0.432525 | 7_2:+24889840 | Msa1053990:three_prime_UTR |
| TTGAGTCATCTTCTCACGAT+TGG | 0.438247 | 7_2:-24887925 | None:intergenic |
| ATCTCTTAGCACCTTCCAGC+AGG | 0.441982 | 7_2:+24889076 | Msa1053990:CDS |
| CACTGGTGTGATGGTTGGCA+TGG | 0.445024 | 7_2:+24887704 | Msa1053990:CDS |
| CAACCTCTTGTTTGTGACAA+TGG | 0.449997 | 7_2:+24887067 | Msa1053990:CDS |
| CAATGGAACTGGAATGGTTA+AGG | 0.450612 | 7_2:+24887084 | Msa1053990:CDS |
| CCTCGTAGATAGGGACAGTA+TGG | 0.450826 | 7_2:-24888515 | None:intergenic |
| GAGAGTCAAAATACCCCTCT+TGG | 0.454876 | 7_2:-24887763 | None:intergenic |
| TCTCTATGCAGGTATTGTGT+TGG | 0.455001 | 7_2:+24888473 | Msa1053990:intron |
| CTACGAATTGCCTGATGGAC+AGG | 0.461381 | 7_2:+24888752 | Msa1053990:CDS |
| GCTAACGATTCCATGTTCAA+TGG | 0.473865 | 7_2:-24887793 | None:intergenic |
| ATGGTGATCACCTGTCCATC+AGG | 0.477697 | 7_2:-24888762 | None:intergenic |
| GGAGCCTCAGTTAAAAGCAC+TGG | 0.477920 | 7_2:-24887888 | None:intergenic |
| AACACGAAGCTCATTGTAGA+AGG | 0.478617 | 7_2:-24887850 | None:intergenic |
| AGAAAATACAGTGTCTGGAT+TGG | 0.479498 | 7_2:+24889038 | Msa1053990:CDS |
| AAGGCAGAATATGATGAATC+TGG | 0.482638 | 7_2:+24889658 | Msa1053990:CDS |
| CTATCATAGATGGTTGGAAC+AGG | 0.482778 | 7_2:-24888815 | None:intergenic |
| AGCAAGAGCTCGAGACAGCC+AGG | 0.483315 | 7_2:+24888706 | Msa1053990:CDS |
| GCGAAGTGAGAGAGAGTGTG+TGG | 0.483767 | 7_2:-24885496 | None:intergenic |
| CTCAAATACCCCATTGAACA+TGG | 0.487849 | 7_2:+24887783 | Msa1053990:CDS |
| GAGAGAAGAGGGTTATTGAA+GGG | 0.489714 | 7_2:+24889729 | Msa1053990:three_prime_UTR |
| AAATACAGTGTCTGGATTGG+AGG | 0.490757 | 7_2:+24889041 | Msa1053990:CDS |
| ATCCTTCGTCTTGATCTGGC+TGG | 0.494460 | 7_2:+24888558 | Msa1053990:CDS |
| AAGGAAAATGCCGAGGGTGA+TGG | 0.500817 | 7_2:-24885549 | None:intergenic |
| TGAATAGCAACATACATAGC+AGG | 0.510580 | 7_2:-24887972 | None:intergenic |
| GCTCTTCTCGACGGATGAGC+TGG | 0.511637 | 7_2:-24888730 | None:intergenic |
| ACGAGGACGACCTACAATGC+TGG | 0.512907 | 7_2:-24887679 | None:intergenic |
| AGACGAGCGTTTCAGATGTC+CGG | 0.524785 | 7_2:+24888788 | Msa1053990:CDS |
| CTTGATCTTCATGCTACTTG+GGG | 0.525749 | 7_2:-24888997 | None:intergenic |
| GACGAAGGATGGCATGTGGA+AGG | 0.532459 | 7_2:-24888545 | None:intergenic |
| TCTGAAACGCTCGTCTCCGA+TGG | 0.533062 | 7_2:-24888781 | None:intergenic |
| TCCTCGTCACACTGGTGTGA+TGG | 0.533985 | 7_2:+24887695 | Msa1053990:CDS |
| ATTGTGTTGGATTCTGGTGA+TGG | 0.535950 | 7_2:+24888486 | Msa1053990:CDS |
| GTCAGCAATGCCTGGGAACA+TGG | 0.536051 | 7_2:-24888946 | None:intergenic |
| CGTTAGCAACTGGGACGACA+TGG | 0.537257 | 7_2:+24887809 | Msa1053990:CDS |
| GGGCATAACCCTCGTAGATA+GGG | 0.538631 | 7_2:-24888524 | None:intergenic |
| CGAAGTGAGAGAGAGTGTGT+GGG | 0.538853 | 7_2:-24885495 | None:intergenic |
| TCTTTGCCTTCCATCACCCT+CGG | 0.540093 | 7_2:+24885539 | Msa1053990:five_prime_UTR |
| CTTACCGGTGGTACGACCAC+TGG | 0.540927 | 7_2:-24888015 | None:intergenic |
| AGGGTGATGGAAGGCAAAGA+AGG | 0.543078 | 7_2:-24885536 | None:intergenic |
| CCCAAGTAGCATGAAGATCA+AGG | 0.546192 | 7_2:+24888998 | Msa1053990:CDS |
| CGAGCTCTTGCTCATAGTCA+AGG | 0.546253 | 7_2:-24888695 | None:intergenic |
| CCATTCCTATCATAGATGGT+TGG | 0.552199 | 7_2:-24888821 | None:intergenic |
| CGAGGACGACCTACAATGCT+GGG | 0.552606 | 7_2:-24887678 | None:intergenic |
| AACAATTTCTCGCTCTGCTG+AGG | 0.553097 | 7_2:-24888640 | None:intergenic |
| AGCCAGATCAAGACGAAGGA+TGG | 0.553433 | 7_2:-24888556 | None:intergenic |
| ATCAACATCGCACTTCATGA+TGG | 0.558200 | 7_2:-24888877 | None:intergenic |
| ATGATAGGAATGGAAGCAGC+AGG | 0.559211 | 7_2:+24888831 | Msa1053990:CDS |
| CCAACCATCTATGATAGGAA+TGG | 0.569599 | 7_2:+24888821 | Msa1053990:CDS |
| TCATTCTGTCAGCAATGCCT+GGG | 0.569632 | 7_2:-24888953 | None:intergenic |
| GGAGGAACAACCATGTTCCC+AGG | 0.570238 | 7_2:+24888936 | Msa1053990:CDS |
| ACATGGAATCGTTAGCAACT+GGG | 0.574134 | 7_2:+24887800 | Msa1053990:CDS |
| AAGCACTGGGTGTTCTTCTG+GGG | 0.574143 | 7_2:-24887874 | None:intergenic |
| AATTTCTCGCTCTGCTGAGG+TGG | 0.575717 | 7_2:-24888637 | None:intergenic |
| GAATAGCAACATACATAGCA+GGG | 0.577899 | 7_2:-24887971 | None:intergenic |
| CAGCTTAGAAGCACTTTCTG+TGG | 0.581853 | 7_2:-24889693 | None:intergenic |
| ATTCTGCGTATGAATTAACT+GGG | 0.585793 | 7_2:+24889940 | Msa1053990:three_prime_UTR |
| CGATTGGCCTTAGGGTTGAG+AGG | 0.589725 | 7_2:-24887909 | None:intergenic |
| ACGAAGGATGGCATGTGGAA+GGG | 0.591719 | 7_2:-24888544 | None:intergenic |
| GGTGCTAAGAGATGCCAAGA+TGG | 0.593241 | 7_2:-24889066 | None:intergenic |
| GATGGTTGGAACAGGACCTC+CGG | 0.593491 | 7_2:-24888807 | None:intergenic |
| AAGAGCTACGAATTGCCTGA+TGG | 0.595436 | 7_2:+24888747 | Msa1053990:CDS |
| TGAGGCTCCTCTCAACCCTA+AGG | 0.595543 | 7_2:+24887902 | Msa1053990:CDS |
| CGTCACACTGGTGTGATGGT+TGG | 0.597543 | 7_2:+24887699 | Msa1053990:CDS |
| ACTGGTGTGATGGTTGGCAT+GGG | 0.600381 | 7_2:+24887705 | Msa1053990:CDS |
| GATATCAGGAAAGACTTGTA+CGG | 0.601211 | 7_2:+24888897 | Msa1053990:CDS |
| GATGGACAGGTGATCACCAT+CGG | 0.601892 | 7_2:+24888765 | Msa1053990:CDS |
| TACGCCAGTGGTCGTACCAC+CGG | 0.602745 | 7_2:+24888011 | Msa1053990:CDS |
| TTGTGACAATGGAACTGGAA+TGG | 0.606936 | 7_2:+24887078 | Msa1053990:CDS |
| GTTCCATTGTCACAAACAAG+AGG | 0.610975 | 7_2:-24887070 | None:intergenic |
| TCTTCATCAAGAAATCGGTA+AGG | 0.614013 | 7_2:-24888587 | None:intergenic |
| AACAAAACAAACCTGCTGGA+AGG | 0.616042 | 7_2:-24889087 | None:intergenic |
| GAGCCTCAGTTAAAAGCACT+GGG | 0.616759 | 7_2:-24887887 | None:intergenic |
| CTTCATGATGGAGTTGTATG+TGG | 0.618935 | 7_2:-24888865 | None:intergenic |
| TGATGAGGCACAGTCCAAGA+GGG | 0.621032 | 7_2:+24887749 | Msa1053990:CDS |
| CATTGCTGACAGAATGAGCA+AGG | 0.623432 | 7_2:+24888959 | Msa1053990:CDS |
| ATGCTGGGAAACACAGCACG+AGG | 0.626971 | 7_2:-24887663 | None:intergenic |
| GAGCTCTTGCTCATAGTCAA+GGG | 0.628126 | 7_2:-24888694 | None:intergenic |
| GTAGGTCGTCCTCGTCACAC+TGG | 0.629317 | 7_2:+24887687 | Msa1053990:CDS |
| GGTAACATTGTGCTTTCAGG+AGG | 0.633227 | 7_2:+24888918 | Msa1053990:CDS |
| GCTGGGAAACACAGCACGAG+GGG | 0.634384 | 7_2:-24887661 | None:intergenic |
| GTTCTTTCACTGTACGCCAG+TGG | 0.634859 | 7_2:+24887999 | Msa1053990:CDS |
| AAAGAATCGGACCTATGGGA+AGG | 0.636402 | 7_2:-24885568 | None:intergenic |
| AAAATGCCGAGGGTGATGGA+AGG | 0.638138 | 7_2:-24885545 | None:intergenic |
| TGCTGGGAAACACAGCACGA+GGG | 0.642727 | 7_2:-24887662 | None:intergenic |
| CTATGGGAAGGAAAATGCCG+AGG | 0.649827 | 7_2:-24885556 | None:intergenic |
| GTGATGAGGCACAGTCCAAG+AGG | 0.652823 | 7_2:+24887748 | Msa1053990:CDS |
| ACTGGCGTACAGTGAAAGAA+CGG | 0.656927 | 7_2:-24887997 | None:intergenic |
| TCAAGACGAAGGATGGCATG+TGG | 0.658783 | 7_2:-24888549 | None:intergenic |
| ACCATCACACCAGTGTGACG+AGG | 0.660573 | 7_2:-24887696 | None:intergenic |
| AGATGCATATGTTGGTGATG+AGG | 0.661651 | 7_2:+24887734 | Msa1053990:CDS |
| CCATACTGTCCCTATCTACG+AGG | 0.672368 | 7_2:+24888515 | Msa1053990:CDS |
| CAATTCGTAGCTCTTCTCGA+CGG | 0.674512 | 7_2:-24888739 | None:intergenic |
| TATGGGAAGGAAAATGCCGA+GGG | 0.680274 | 7_2:-24885555 | None:intergenic |
| GATGAGGCACAGTCCAAGAG+GGG | 0.682041 | 7_2:+24887750 | Msa1053990:CDS |
| GTAGACGATGGCAGACGCTG+AGG | 0.683003 | 7_2:+24887039 | Msa1053990:exon |
| AATAGCAACATACATAGCAG+GGG | 0.691158 | 7_2:-24887970 | None:intergenic |
| CGAGCGTTTCAGATGTCCGG+AGG | 0.696555 | 7_2:+24888791 | Msa1053990:CDS |
| AGTGCAGATGTGGATTGCAA+AGG | 0.699053 | 7_2:+24889639 | Msa1053990:intron |
| GACCAGCCAGATCAAGACGA+AGG | 0.700093 | 7_2:-24888560 | None:intergenic |
| CTGCAGATAGTAGTAGACGA+TGG | 0.705965 | 7_2:+24887027 | Msa1053990:intron |
| CATACTGTCCCTATCTACGA+GGG | 0.714771 | 7_2:+24888516 | Msa1053990:CDS |
| TAACGATTCCATGTTCAATG+GGG | 0.715992 | 7_2:-24887791 | None:intergenic |
| GAAGGAGAGAAAATGCACAG+AGG | 0.737959 | 7_2:-24885518 | None:intergenic |
| AAGTAGCATGAAGATCAAGG+TGG | 0.766332 | 7_2:+24889001 | Msa1053990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTATATATAATGTTATTATA+TGG | + | chr7_2:24889132-24889151 | Msa1053990:intron | 10.0% |
| !!! | TTTTGAGTTATTTCTTAATT+TGG | + | chr7_2:24885777-24885796 | Msa1053990:intron | 15.0% |
| !!! | AAAAAAGAAACAATTTTGAT+TGG | + | chr7_2:24886318-24886337 | Msa1053990:intron | 15.0% |
| !!! | AAAATTGTTTTTAACATGTT+TGG | + | chr7_2:24886737-24886756 | Msa1053990:intron | 15.0% |
| !!! | TTTAATTTGAAACTAGAATT+TGG | + | chr7_2:24886799-24886818 | Msa1053990:intron | 15.0% |
| !! | CTTTATAATCAATAAATTCT+CGG | + | chr7_2:24886889-24886908 | Msa1053990:intron | 15.0% |
| !!! | TATTAGCTTATAATTTTGTT+AGG | + | chr7_2:24887425-24887444 | Msa1053990:intron | 15.0% |
| !!! | TGATTAGATTTTTTATTATG+TGG | + | chr7_2:24888054-24888073 | Msa1053990:intron | 15.0% |
| !!! | GATTAGATTTTTTATTATGT+GGG | + | chr7_2:24888055-24888074 | Msa1053990:intron | 15.0% |
| !!! | ATTGAGAATTTTCAAATTTA+GGG | - | chr7_2:24889201-24889220 | None:intergenic | 15.0% |
| !!! | AAAACTTAATAAGCTATTTT+TGG | + | chr7_2:24889320-24889339 | Msa1053990:intron | 15.0% |
| !! | CAAGTAATAATGAATTTAAA+GGG | - | chr7_2:24889802-24889821 | None:intergenic | 15.0% |
| !!! | GATTTTATTTGTTCTTGATT+AGG | + | chr7_2:24885659-24885678 | Msa1053990:intron | 20.0% |
| !!! | TTATTTCTTAATTTGGTTGA+TGG | + | chr7_2:24885784-24885803 | Msa1053990:intron | 20.0% |
| !!! | TATTTCTTAATTTGGTTGAT+GGG | + | chr7_2:24885785-24885804 | Msa1053990:intron | 20.0% |
| !!! | TGTTTCTAAATTTGATTGAA+TGG | + | chr7_2:24885937-24885956 | Msa1053990:intron | 20.0% |
| !!! | TAATAGTATTGAATTTGAGT+TGG | + | chr7_2:24886103-24886122 | Msa1053990:intron | 20.0% |
| !!! | TTGATTAGTTAGATTTCAAA+TGG | + | chr7_2:24886156-24886175 | Msa1053990:intron | 20.0% |
| !!! | TGATTAGTTAGATTTCAAAT+GGG | + | chr7_2:24886157-24886176 | Msa1053990:intron | 20.0% |
| !! | GAAAACTTTATCATATACAA+TGG | - | chr7_2:24886206-24886225 | None:intergenic | 20.0% |
| !!! | ATAAAGTTTTCATTTTTGAG+AGG | + | chr7_2:24886215-24886234 | Msa1053990:intron | 20.0% |
| !! | TTCTTTATAGTTAATGTAGA+TGG | + | chr7_2:24886377-24886396 | Msa1053990:intron | 20.0% |
| !!! | AAACAAAATAGTTTGTAGTT+AGG | - | chr7_2:24886662-24886681 | None:intergenic | 20.0% |
| !!! | TTTGAGGCTTAAAAATAATT+TGG | - | chr7_2:24886837-24886856 | None:intergenic | 20.0% |
| !!! | GGTTTAAGAAAATTGTTTTT+TGG | + | chr7_2:24886910-24886929 | Msa1053990:intron | 20.0% |
| !!! | AGAAATGATCTTATTGTTTT+TGG | + | chr7_2:24887110-24887129 | Msa1053990:intron | 20.0% |
| !!! | CTATTTTCTCAAATTCAATT+AGG | - | chr7_2:24887599-24887618 | None:intergenic | 20.0% |
| !!! | TTTCATTTGCAAATTTTACT+TGG | - | chr7_2:24888262-24888281 | None:intergenic | 20.0% |
| !! | AAATGTTGTTAGAAAGTAAA+CGG | + | chr7_2:24888280-24888299 | Msa1053990:intron | 20.0% |
| !! | AACACAAAACAAAACAATTT+AGG | - | chr7_2:24888308-24888327 | None:intergenic | 20.0% |
| !!! | TTTATAAATTCCGAGTTTTA+GGG | - | chr7_2:24889173-24889192 | None:intergenic | 20.0% |
| !!! | TTTTATAAATTCCGAGTTTT+AGG | - | chr7_2:24889174-24889193 | None:intergenic | 20.0% |
| !!! | GATTGAGAATTTTCAAATTT+AGG | - | chr7_2:24889202-24889221 | None:intergenic | 20.0% |
| !! | ATTAAGCTAATTATTCAAAG+TGG | + | chr7_2:24889487-24889506 | Msa1053990:intron | 20.0% |
| !! | TTAAGCTAATTATTCAAAGT+GGG | + | chr7_2:24889488-24889507 | Msa1053990:intron | 20.0% |
| !!! | TTCTATCATATTAATCCTTT+TGG | - | chr7_2:24889528-24889547 | None:intergenic | 20.0% |
| !! | AAAAGGATTAATATGATAGA+AGG | + | chr7_2:24889527-24889546 | Msa1053990:intron | 20.0% |
| !! | GCAAGTAATAATGAATTTAA+AGG | - | chr7_2:24889803-24889822 | None:intergenic | 20.0% |
| !! | CATGTTATTATTCTAAATGT+TGG | + | chr7_2:24889840-24889859 | Msa1053990:three_prime_UTR | 20.0% |
| ! | AGGAAATGAAAATGGAAAAT+GGG | - | chr7_2:24885429-24885448 | None:intergenic | 25.0% |
| ! | CAAAAAAGAGGAAATGAAAA+TGG | - | chr7_2:24885437-24885456 | None:intergenic | 25.0% |
| ! | AACAGATCAATGAAAAGAAT+CGG | - | chr7_2:24885584-24885603 | None:intergenic | 25.0% |
| ! | TTGATTAGGTAGATTTGAAA+TGG | + | chr7_2:24885673-24885692 | Msa1053990:intron | 25.0% |
| !! | TGATTAGGTAGATTTGAAAT+GGG | + | chr7_2:24885674-24885693 | Msa1053990:intron | 25.0% |
| ! | TTGATTAGGTAGATTTGAAA+TGG | + | chr7_2:24885673-24885692 | Msa1053990:intron | 25.0% |
| !! | TGATTAGGTAGATTTGAAAT+GGG | + | chr7_2:24885674-24885693 | Msa1053990:intron | 25.0% |
| !!! | GGTTTTATTTGTTCTTGATT+AGG | + | chr7_2:24885973-24885992 | Msa1053990:intron | 25.0% |
| ! | TTGATTAGGTAGATTTGAAA+TGG | + | chr7_2:24885673-24885692 | Msa1053990:intron | 25.0% |
| !! | TGATTAGGTAGATTTGAAAT+GGG | + | chr7_2:24885674-24885693 | Msa1053990:intron | 25.0% |
| !!! | TCATTTTTACCCTTTTTTGT+TGG | + | chr7_2:24886055-24886074 | Msa1053990:intron | 25.0% |
| ! | TTATCCAAACCAACAAAAAA+GGG | - | chr7_2:24886067-24886086 | None:intergenic | 25.0% |
| ! | TTTATCCAAACCAACAAAAA+AGG | - | chr7_2:24886068-24886087 | None:intergenic | 25.0% |
| !!! | TCATTTTAATTGATCGATCT+AGG | + | chr7_2:24886272-24886291 | Msa1053990:intron | 25.0% |
| ! | ATCTAGGTGTTTGTTTAATT+TGG | + | chr7_2:24886288-24886307 | Msa1053990:intron | 25.0% |
| ! | CAATTATTTAGCGATATTTG+AGG | + | chr7_2:24886528-24886547 | Msa1053990:intron | 25.0% |
| ! | TTGAGGTAAAAAGTGAAATT+TGG | + | chr7_2:24886545-24886564 | Msa1053990:intron | 25.0% |
| ! | TAATCAACTAGGTGTATATT+TGG | + | chr7_2:24886695-24886714 | Msa1053990:intron | 25.0% |
| !! | TGAGTTGAACAATTAATTTG+AGG | - | chr7_2:24886853-24886872 | None:intergenic | 25.0% |
| ! | AATAGAGATTCATATCAATC+GGG | - | chr7_2:24887196-24887215 | None:intergenic | 25.0% |
| ! | CAATAGAGATTCATATCAAT+CGG | - | chr7_2:24887197-24887216 | None:intergenic | 25.0% |
| !! | ACTAAGTTGACAAAAACAAA+AGG | - | chr7_2:24887338-24887357 | None:intergenic | 25.0% |
| ! | GTCATAAATCAAATGACAAA+TGG | - | chr7_2:24887369-24887388 | None:intergenic | 25.0% |
| ! | ATTCTCTATCATAATTGAAG+AGG | + | chr7_2:24888198-24888217 | Msa1053990:intron | 25.0% |
| ! | AATGTTGTTAGAAAGTAAAC+GGG | + | chr7_2:24888281-24888300 | Msa1053990:intron | 25.0% |
| ! | CAAAATCTTCATCAAGAAAT+CGG | - | chr7_2:24888595-24888614 | None:intergenic | 25.0% |
| !!! | TTATAAATTCCGAGTTTTAG+GGG | - | chr7_2:24889172-24889191 | None:intergenic | 25.0% |
| !!! | AATTTCTCTAGGATAACTTA+TGG | + | chr7_2:24889295-24889314 | Msa1053990:intron | 25.0% |
| ! | AAGTGCTTGTATATAAGTTA+TGG | - | chr7_2:24889436-24889455 | None:intergenic | 25.0% |
| ! | CTTATATACAAGCACTTATA+TGG | + | chr7_2:24889439-24889458 | Msa1053990:intron | 25.0% |
| !! | TATATTGAGTCTGAAATTGT+AGG | - | chr7_2:24889585-24889604 | None:intergenic | 25.0% |
| ! | AGACTCAATATATATTCCAT+TGG | + | chr7_2:24889593-24889612 | Msa1053990:intron | 25.0% |
| ! | GCATATATATATATCAAACG+TGG | - | chr7_2:24889978-24889997 | None:intergenic | 25.0% |
| GAGGAAATGAAAATGGAAAA+TGG | - | chr7_2:24885430-24885449 | None:intergenic | 30.0% | |
| GAGTCTAACAAACAAAAAAG+AGG | - | chr7_2:24885449-24885468 | None:intergenic | 30.0% | |
| ! | TGATCTGTTTTCTTCTTGTT+TGG | + | chr7_2:24885595-24885614 | Msa1053990:intron | 30.0% |
| !! | TCTTGCTTTTGTTCTTGATT+AGG | + | chr7_2:24885811-24885830 | Msa1053990:intron | 30.0% |
| ! | TTGAATGGTGTTCTTGATTT+TGG | + | chr7_2:24885952-24885971 | Msa1053990:intron | 30.0% |
| !!! | TTTACCCTTTTTTGTTGGTT+TGG | + | chr7_2:24886060-24886079 | Msa1053990:intron | 30.0% |
| !! | GGTGTTTGTTTAATTTGGAA+AGG | + | chr7_2:24886293-24886312 | Msa1053990:intron | 30.0% |
| AGGTAAAAAGTGAAATTTGG+TGG | + | chr7_2:24886548-24886567 | Msa1053990:intron | 30.0% | |
| AGAAAGAATAGATTCCGAAA+AGG | + | chr7_2:24886588-24886607 | Msa1053990:intron | 30.0% | |
| ! | GCATTATGGTATTTCCTTTT+CGG | - | chr7_2:24886605-24886624 | None:intergenic | 30.0% |
| !!! | ATACCATAATGCTTGTTTTG+TGG | + | chr7_2:24886613-24886632 | Msa1053990:intron | 30.0% |
| TAGTGCATGTTTAATCAACT+AGG | + | chr7_2:24886684-24886703 | Msa1053990:intron | 30.0% | |
| !!! | TTTGGTTTTACATTTGCATG+AGG | + | chr7_2:24886713-24886732 | Msa1053990:intron | 30.0% |
| TGGATGTGTTCGAATAATAT+TGG | + | chr7_2:24886757-24886776 | Msa1053990:intron | 30.0% | |
| TTGGATTGATATAGTAAGTG+AGG | + | chr7_2:24886929-24886948 | Msa1053990:intron | 30.0% | |
| AACTTAGTTGGCATTGTTTA+TGG | + | chr7_2:24886968-24886987 | Msa1053990:intron | 30.0% | |
| !!! | TGATCTTATTGTTTTTGGCA+TGG | + | chr7_2:24887115-24887134 | Msa1053990:intron | 30.0% |
| GAGATTCTTCATAGAGAATT+GGG | - | chr7_2:24887273-24887292 | None:intergenic | 30.0% | |
| AGTTGACAAAAACAAAAGGT+TGG | - | chr7_2:24887334-24887353 | None:intergenic | 30.0% | |
| AAACTTAATGCTATCAACCA+TGG | - | chr7_2:24887511-24887530 | None:intergenic | 30.0% | |
| TCATAATGCAGTACTTTAGT+TGG | + | chr7_2:24887544-24887563 | Msa1053990:intron | 30.0% | |
| GCAGTTAAAAAATGACTTAC+CGG | - | chr7_2:24888033-24888052 | None:intergenic | 30.0% | |
| ! | TCACTGACTGTTAAAATGAA+TGG | + | chr7_2:24888336-24888355 | Msa1053990:intron | 30.0% |
| ! | CACTGACTGTTAAAATGAAT+GGG | + | chr7_2:24888337-24888356 | Msa1053990:intron | 30.0% |
| ! | TATATTTTCTGTCTCTATGC+AGG | + | chr7_2:24888462-24888481 | Msa1053990:intron | 30.0% |
| GAGAAAGAGATAAACAAGAA+AGG | - | chr7_2:24889113-24889132 | None:intergenic | 30.0% | |
| ATTATATGGCATTGCTAACT+AGG | + | chr7_2:24889146-24889165 | Msa1053990:intron | 30.0% | |
| TAAGACAATTTCAGAGACTA+AGG | + | chr7_2:24889236-24889255 | Msa1053990:intron | 30.0% | |
| TTACCTGACATAATTTCTCT+AGG | + | chr7_2:24889284-24889303 | Msa1053990:intron | 30.0% | |
| TATCCTAGAGAAATTATGTC+AGG | - | chr7_2:24889290-24889309 | None:intergenic | 30.0% | |
| CTTATTTCCATAAGTTCTCT+AGG | + | chr7_2:24889343-24889362 | Msa1053990:intron | 30.0% | |
| AAGTTATCCTAGAGAACTTA+TGG | - | chr7_2:24889353-24889372 | None:intergenic | 30.0% | |
| ! | AAAGTTTGTGTCATTACCAA+TGG | - | chr7_2:24889612-24889631 | None:intergenic | 30.0% |
| ATTCTGCGTATGAATTAACT+GGG | + | chr7_2:24889940-24889959 | Msa1053990:three_prime_UTR | 30.0% | |
| ATGAAAAGAATCGGACCTAT+GGG | - | chr7_2:24885575-24885594 | None:intergenic | 35.0% | |
| AATGAAAAGAATCGGACCTA+TGG | - | chr7_2:24885576-24885595 | None:intergenic | 35.0% | |
| GGATCTATCATTGTTAAGCT+TGG | + | chr7_2:24886398-24886417 | Msa1053990:intron | 35.0% | |
| ! | TAGTTTGTAGTTAGGAGAGT+GGG | - | chr7_2:24886654-24886673 | None:intergenic | 35.0% |
| ! | ATAGTTTGTAGTTAGGAGAG+TGG | - | chr7_2:24886655-24886674 | None:intergenic | 35.0% |
| GATATAGTAAGTGAGGTAAG+TGG | + | chr7_2:24886936-24886955 | Msa1053990:intron | 35.0% | |
| TGGGATTCATCGTAATGAAT+CGG | - | chr7_2:24887254-24887273 | None:intergenic | 35.0% | |
| CGAGATTCTTCATAGAGAAT+TGG | - | chr7_2:24887274-24887293 | None:intergenic | 35.0% | |
| TTCATGATATGATCTCGAGT+TGG | + | chr7_2:24887482-24887501 | Msa1053990:intron | 35.0% | |
| ! | AGATTCCGATTTCTCTTTTC+AGG | + | chr7_2:24887617-24887636 | Msa1053990:intron | 35.0% |
| GGTCAAAAAGATGCATATGT+TGG | + | chr7_2:24887726-24887745 | Msa1053990:CDS | 35.0% | |
| TAACGATTCCATGTTCAATG+GGG | - | chr7_2:24887794-24887813 | None:intergenic | 35.0% | |
| CTAACGATTCCATGTTCAAT+GGG | - | chr7_2:24887795-24887814 | None:intergenic | 35.0% | |
| AATAGCAACATACATAGCAG+GGG | - | chr7_2:24887973-24887992 | None:intergenic | 35.0% | |
| GAATAGCAACATACATAGCA+GGG | - | chr7_2:24887974-24887993 | None:intergenic | 35.0% | |
| TGAATAGCAACATACATAGC+AGG | - | chr7_2:24887975-24887994 | None:intergenic | 35.0% | |
| ! | TGCTATGTATGTTGCTATTC+AGG | + | chr7_2:24887974-24887993 | Msa1053990:CDS | 35.0% |
| GTTAAAAAATGACTTACCGG+TGG | - | chr7_2:24888030-24888049 | None:intergenic | 35.0% | |
| ! | ACACTAGAGAGAATGCATTT+TGG | - | chr7_2:24888168-24888187 | None:intergenic | 35.0% |
| GAGGAAAATCTACAACCAAA+TGG | + | chr7_2:24888217-24888236 | Msa1053990:intron | 35.0% | |
| ! | AATTTTACTTGGCAAGTCTG+TGG | - | chr7_2:24888251-24888270 | None:intergenic | 35.0% |
| GTATTCAGAAGCTATGATTG+TGG | + | chr7_2:24888388-24888407 | Msa1053990:intron | 35.0% | |
| TCTTCATCAAGAAATCGGTA+AGG | - | chr7_2:24888590-24888609 | None:intergenic | 35.0% | |
| !!! | ATGAAGATTTTGACTGAACG+TGG | + | chr7_2:24888603-24888622 | Msa1053990:CDS | 35.0% |
| GATATCAGGAAAGACTTGTA+CGG | + | chr7_2:24888897-24888916 | Msa1053990:CDS | 35.0% | |
| AGAAAATACAGTGTCTGGAT+TGG | + | chr7_2:24889038-24889057 | Msa1053990:CDS | 35.0% | |
| ! | TCCTTTTGGATCAGTCATTT+AGG | - | chr7_2:24889514-24889533 | None:intergenic | 35.0% |
| ! | TTTTCTTATGAGTGCAGATG+TGG | + | chr7_2:24889629-24889648 | Msa1053990:intron | 35.0% |
| AAGGCAGAATATGATGAATC+TGG | + | chr7_2:24889658-24889677 | Msa1053990:CDS | 35.0% | |
| !!! | TTCTACTGTTTTGAGAGAAG+AGG | + | chr7_2:24889717-24889736 | Msa1053990:three_prime_UTR | 35.0% |
| !!! | TCTACTGTTTTGAGAGAAGA+GGG | + | chr7_2:24889718-24889737 | Msa1053990:three_prime_UTR | 35.0% |
| CATTCTGCGTATGAATTAAC+TGG | + | chr7_2:24889939-24889958 | Msa1053990:three_prime_UTR | 35.0% | |
| GGTCCACAAAACAAGCATTA+TGG | - | chr7_2:24886619-24886638 | None:intergenic | 40.0% | |
| GAGAGTGGGAAAACATGAAA+GGG | - | chr7_2:24886640-24886659 | None:intergenic | 40.0% | |
| ATAGTAAGTGAGGTAAGTGG+AGG | + | chr7_2:24886939-24886958 | Msa1053990:intron | 40.0% | |
| TAGTAAGTGAGGTAAGTGGA+GGG | + | chr7_2:24886940-24886959 | Msa1053990:intron | 40.0% | |
| ! | CAACCTCTTGTTTGTGACAA+TGG | + | chr7_2:24887067-24887086 | Msa1053990:CDS | 40.0% |
| GTTCCATTGTCACAAACAAG+AGG | - | chr7_2:24887073-24887092 | None:intergenic | 40.0% | |
| CTTGTTTGTGACAATGGAAC+TGG | + | chr7_2:24887073-24887092 | Msa1053990:CDS | 40.0% | |
| TTGTGACAATGGAACTGGAA+TGG | + | chr7_2:24887078-24887097 | Msa1053990:CDS | 40.0% | |
| CAATGGAACTGGAATGGTTA+AGG | + | chr7_2:24887084-24887103 | Msa1053990:CDS | 40.0% | |
| GGATTCATCGTAATGAATCG+GGG | - | chr7_2:24887252-24887271 | None:intergenic | 40.0% | |
| GGGATTCATCGTAATGAATC+GGG | - | chr7_2:24887253-24887272 | None:intergenic | 40.0% | |
| GACACGCTAAGTTTAGGTAA+TGG | - | chr7_2:24887312-24887331 | None:intergenic | 40.0% | |
| TCCAGCCTGAAAAGAGAAAT+CGG | - | chr7_2:24887625-24887644 | None:intergenic | 40.0% | |
| !! | AGATGCATATGTTGGTGATG+AGG | + | chr7_2:24887734-24887753 | Msa1053990:CDS | 40.0% |
| CTCAAATACCCCATTGAACA+TGG | + | chr7_2:24887783-24887802 | Msa1053990:CDS | 40.0% | |
| GCTAACGATTCCATGTTCAA+TGG | - | chr7_2:24887796-24887815 | None:intergenic | 40.0% | |
| AACATGGAATCGTTAGCAAC+TGG | + | chr7_2:24887799-24887818 | Msa1053990:CDS | 40.0% | |
| ACATGGAATCGTTAGCAACT+GGG | + | chr7_2:24887800-24887819 | Msa1053990:CDS | 40.0% | |
| AACACGAAGCTCATTGTAGA+AGG | - | chr7_2:24887853-24887872 | None:intergenic | 40.0% | |
| TTGAGTCATCTTCTCACGAT+TGG | - | chr7_2:24887928-24887947 | None:intergenic | 40.0% | |
| AAGTAGCTTCTGTGAGAAGT+AGG | + | chr7_2:24888363-24888382 | Msa1053990:intron | 40.0% | |
| ! | TCTCTATGCAGGTATTGTGT+TGG | + | chr7_2:24888473-24888492 | Msa1053990:intron | 40.0% |
| ATTGTGTTGGATTCTGGTGA+TGG | + | chr7_2:24888486-24888505 | Msa1053990:CDS | 40.0% | |
| CTATCATAGATGGTTGGAAC+AGG | - | chr7_2:24888818-24888837 | None:intergenic | 40.0% | |
| CTGTTCCAACCATCTATGAT+AGG | + | chr7_2:24888816-24888835 | Msa1053990:CDS | 40.0% | |
| CCATTCCTATCATAGATGGT+TGG | - | chr7_2:24888824-24888843 | None:intergenic | 40.0% | |
| CCAACCATCTATGATAGGAA+TGG | + | chr7_2:24888821-24888840 | Msa1053990:CDS | 40.0% | |
| GCTTCCATTCCTATCATAGA+TGG | - | chr7_2:24888828-24888847 | None:intergenic | 40.0% | |
| ! | CTTCATGATGGAGTTGTATG+TGG | - | chr7_2:24888868-24888887 | None:intergenic | 40.0% |
| ATCAACATCGCACTTCATGA+TGG | - | chr7_2:24888880-24888899 | None:intergenic | 40.0% | |
| TGAAGTGCGATGTTGATATC+AGG | + | chr7_2:24888883-24888902 | Msa1053990:CDS | 40.0% | |
| TACGGTAACATTGTGCTTTC+AGG | + | chr7_2:24888915-24888934 | Msa1053990:CDS | 40.0% | |
| GAGCAAGGAAATTTCTGCTT+TGG | + | chr7_2:24888974-24888993 | Msa1053990:CDS | 40.0% | |
| ! | CTTGATCTTCATGCTACTTG+GGG | - | chr7_2:24889000-24889019 | None:intergenic | 40.0% |
| ! | CCTTGATCTTCATGCTACTT+GGG | - | chr7_2:24889001-24889020 | None:intergenic | 40.0% |
| ACCTTGATCTTCATGCTACT+TGG | - | chr7_2:24889002-24889021 | None:intergenic | 40.0% | |
| AAGTAGCATGAAGATCAAGG+TGG | + | chr7_2:24889001-24889020 | Msa1053990:CDS | 40.0% | |
| ! | ACACTGTATTTTCTCTCAGG+TGG | - | chr7_2:24889032-24889051 | None:intergenic | 40.0% |
| ! | CAGACACTGTATTTTCTCTC+AGG | - | chr7_2:24889035-24889054 | None:intergenic | 40.0% |
| CTGAGAGAAAATACAGTGTC+TGG | + | chr7_2:24889033-24889052 | Msa1053990:CDS | 40.0% | |
| ! | AAATACAGTGTCTGGATTGG+AGG | + | chr7_2:24889041-24889060 | Msa1053990:CDS | 40.0% |
| AACAAAACAAACCTGCTGGA+AGG | - | chr7_2:24889090-24889109 | None:intergenic | 40.0% | |
| AAGGAACAAAACAAACCTGC+TGG | - | chr7_2:24889094-24889113 | None:intergenic | 40.0% | |
| GCCTAAATGACTGATCCAAA+AGG | + | chr7_2:24889510-24889529 | Msa1053990:intron | 40.0% | |
| CACTTTCTGTGGACAATTGA+TGG | - | chr7_2:24889685-24889704 | None:intergenic | 40.0% | |
| TGAGAGAAGAGGGTTATTGA+AGG | + | chr7_2:24889728-24889747 | Msa1053990:three_prime_UTR | 40.0% | |
| GAGAGAAGAGGGTTATTGAA+GGG | + | chr7_2:24889729-24889748 | Msa1053990:three_prime_UTR | 40.0% | |
| GAAGGAGAGAAAATGCACAG+AGG | - | chr7_2:24885521-24885540 | None:intergenic | 45.0% | |
| TATGGGAAGGAAAATGCCGA+GGG | - | chr7_2:24885558-24885577 | None:intergenic | 45.0% | |
| AAAGAATCGGACCTATGGGA+AGG | - | chr7_2:24885571-24885590 | None:intergenic | 45.0% | |
| GGAGAGTGGGAAAACATGAA+AGG | - | chr7_2:24886641-24886660 | None:intergenic | 45.0% | |
| AGTAAGTGAGGTAAGTGGAG+GGG | + | chr7_2:24886941-24886960 | Msa1053990:intron | 45.0% | |
| TGGAGGGGAGAAAACTTAGT+TGG | + | chr7_2:24886956-24886975 | Msa1053990:intron | 45.0% | |
| CATCGTCTACTACTATCTGC+AGG | - | chr7_2:24887029-24887048 | None:intergenic | 45.0% | |
| CTGCAGATAGTAGTAGACGA+TGG | + | chr7_2:24887027-24887046 | Msa1053990:intron | 45.0% | |
| AGGTTGGACACGCTAAGTTT+AGG | - | chr7_2:24887318-24887337 | None:intergenic | 45.0% | |
| !! | TGATCTCGAGTTGGTAACCA+TGG | + | chr7_2:24887491-24887510 | Msa1053990:intron | 45.0% |
| !! | TCCGATTTCTCTTTTCAGGC+TGG | + | chr7_2:24887621-24887640 | Msa1053990:intron | 45.0% |
| !! | TCTTTTCAGGCTGGATTTGC+TGG | + | chr7_2:24887630-24887649 | Msa1053990:intron | 45.0% |
| GAGAGTCAAAATACCCCTCT+TGG | - | chr7_2:24887766-24887785 | None:intergenic | 45.0% | |
| GGGACGACATGGAAAAGATT+TGG | + | chr7_2:24887820-24887839 | Msa1053990:CDS | 45.0% | |
| !! | AAAGCACTGGGTGTTCTTCT+GGG | - | chr7_2:24887878-24887897 | None:intergenic | 45.0% |
| !! | AAAAGCACTGGGTGTTCTTC+TGG | - | chr7_2:24887879-24887898 | None:intergenic | 45.0% |
| !! | ACACCCAGTGCTTTTAACTG+AGG | + | chr7_2:24887884-24887903 | Msa1053990:CDS | 45.0% |
| !! | GAGCCTCAGTTAAAAGCACT+GGG | - | chr7_2:24887890-24887909 | None:intergenic | 45.0% |
| !! | TCTTCTCACGATTGGCCTTA+GGG | - | chr7_2:24887920-24887939 | None:intergenic | 45.0% |
| !! | ATCTTCTCACGATTGGCCTT+AGG | - | chr7_2:24887921-24887940 | None:intergenic | 45.0% |
| ACTGGCGTACAGTGAAAGAA+CGG | - | chr7_2:24888000-24888019 | None:intergenic | 45.0% | |
| ! | GCAGGTATTGTGTTGGATTC+TGG | + | chr7_2:24888480-24888499 | Msa1053990:intron | 45.0% |
| CATACTGTCCCTATCTACGA+GGG | + | chr7_2:24888516-24888535 | Msa1053990:CDS | 45.0% | |
| AACAATTTCTCGCTCTGCTG+AGG | - | chr7_2:24888643-24888662 | None:intergenic | 45.0% | |
| GAGCTCTTGCTCATAGTCAA+GGG | - | chr7_2:24888697-24888716 | None:intergenic | 45.0% | |
| CAATTCGTAGCTCTTCTCGA+CGG | - | chr7_2:24888742-24888761 | None:intergenic | 45.0% | |
| AAGAGCTACGAATTGCCTGA+TGG | + | chr7_2:24888747-24888766 | Msa1053990:CDS | 45.0% | |
| ATGATAGGAATGGAAGCAGC+AGG | + | chr7_2:24888831-24888850 | Msa1053990:CDS | 45.0% | |
| GGTAACATTGTGCTTTCAGG+AGG | + | chr7_2:24888918-24888937 | Msa1053990:CDS | 45.0% | |
| TCATTCTGTCAGCAATGCCT+GGG | - | chr7_2:24888956-24888975 | None:intergenic | 45.0% | |
| CATTGCTGACAGAATGAGCA+AGG | + | chr7_2:24888959-24888978 | Msa1053990:CDS | 45.0% | |
| CCCAAGTAGCATGAAGATCA+AGG | + | chr7_2:24888998-24889017 | Msa1053990:CDS | 45.0% | |
| CTAACTAGGCCCCTAAAACT+CGG | + | chr7_2:24889160-24889179 | Msa1053990:intron | 45.0% | |
| ! | AGTGCAGATGTGGATTGCAA+AGG | + | chr7_2:24889639-24889658 | Msa1053990:intron | 45.0% |
| !! | CAGCTTAGAAGCACTTTCTG+TGG | - | chr7_2:24889696-24889715 | None:intergenic | 45.0% |
| GCTACAAGTTGCAATGCTTC+TGG | - | chr7_2:24889777-24889796 | None:intergenic | 45.0% | |
| !!! | TATCAATTTTTATTTTTATT+TGG | + | chr7_2:24886248-24886267 | Msa1053990:intron | 5.0% |
| !!! | ATCAATTTTTATTTTTATTT+GGG | + | chr7_2:24886249-24886268 | Msa1053990:intron | 5.0% |
| ! | CGAAGTGAGAGAGAGTGTGT+GGG | - | chr7_2:24885498-24885517 | None:intergenic | 50.0% |
| !! | AGGGTGATGGAAGGCAAAGA+AGG | - | chr7_2:24885539-24885558 | None:intergenic | 50.0% |
| TCTTTGCCTTCCATCACCCT+CGG | + | chr7_2:24885539-24885558 | Msa1053990:five_prime_UTR | 50.0% | |
| !! | AAAATGCCGAGGGTGATGGA+AGG | - | chr7_2:24885548-24885567 | None:intergenic | 50.0% |
| AAGGAAAATGCCGAGGGTGA+TGG | - | chr7_2:24885552-24885571 | None:intergenic | 50.0% | |
| CTATGGGAAGGAAAATGCCG+AGG | - | chr7_2:24885559-24885578 | None:intergenic | 50.0% | |
| ! | CTCGGCATTTTCCTTCCCAT+AGG | + | chr7_2:24885557-24885576 | Msa1053990:five_prime_UTR | 50.0% |
| GCTGTGTTTCCCAGCATTGT+AGG | + | chr7_2:24887669-24887688 | Msa1053990:CDS | 50.0% | |
| ACTGGTGTGATGGTTGGCAT+GGG | + | chr7_2:24887705-24887724 | Msa1053990:CDS | 50.0% | |
| TGATGAGGCACAGTCCAAGA+GGG | + | chr7_2:24887749-24887768 | Msa1053990:CDS | 50.0% | |
| !! | AAGCACTGGGTGTTCTTCTG+GGG | - | chr7_2:24887877-24887896 | None:intergenic | 50.0% |
| ! | GGAGCCTCAGTTAAAAGCAC+TGG | - | chr7_2:24887891-24887910 | None:intergenic | 50.0% |
| GTTCTTTCACTGTACGCCAG+TGG | + | chr7_2:24887999-24888018 | Msa1053990:CDS | 50.0% | |
| TCTGTGGCTGGAATGCCATT+TGG | - | chr7_2:24888235-24888254 | None:intergenic | 50.0% | |
| TTACTTGGCAAGTCTGTGGC+TGG | - | chr7_2:24888247-24888266 | None:intergenic | 50.0% | |
| CCTCGTAGATAGGGACAGTA+TGG | - | chr7_2:24888518-24888537 | None:intergenic | 50.0% | |
| CCATACTGTCCCTATCTACG+AGG | + | chr7_2:24888515-24888534 | Msa1053990:CDS | 50.0% | |
| GGGCATAACCCTCGTAGATA+GGG | - | chr7_2:24888527-24888546 | None:intergenic | 50.0% | |
| AGGGCATAACCCTCGTAGAT+AGG | - | chr7_2:24888528-24888547 | None:intergenic | 50.0% | |
| ACGAAGGATGGCATGTGGAA+GGG | - | chr7_2:24888547-24888566 | None:intergenic | 50.0% | |
| TCAAGACGAAGGATGGCATG+TGG | - | chr7_2:24888552-24888571 | None:intergenic | 50.0% | |
| TGCCATCCTTCGTCTTGATC+TGG | + | chr7_2:24888554-24888573 | Msa1053990:CDS | 50.0% | |
| AGCCAGATCAAGACGAAGGA+TGG | - | chr7_2:24888559-24888578 | None:intergenic | 50.0% | |
| ATCCTTCGTCTTGATCTGGC+TGG | + | chr7_2:24888558-24888577 | Msa1053990:CDS | 50.0% | |
| AATTTCTCGCTCTGCTGAGG+TGG | - | chr7_2:24888640-24888659 | None:intergenic | 50.0% | |
| CGAGCTCTTGCTCATAGTCA+AGG | - | chr7_2:24888698-24888717 | None:intergenic | 50.0% | |
| ! | CTACGAATTGCCTGATGGAC+AGG | + | chr7_2:24888752-24888771 | Msa1053990:CDS | 50.0% |
| ATGGTGATCACCTGTCCATC+AGG | - | chr7_2:24888765-24888784 | None:intergenic | 50.0% | |
| GATGGACAGGTGATCACCAT+CGG | + | chr7_2:24888765-24888784 | Msa1053990:CDS | 50.0% | |
| AGACGAGCGTTTCAGATGTC+CGG | + | chr7_2:24888788-24888807 | Msa1053990:CDS | 50.0% | |
| CTCATTCTGTCAGCAATGCC+TGG | - | chr7_2:24888957-24888976 | None:intergenic | 50.0% | |
| ! | CTGGATTGGAGGTTCCATCT+TGG | + | chr7_2:24889052-24889071 | Msa1053990:CDS | 50.0% |
| GGTGCTAAGAGATGCCAAGA+TGG | - | chr7_2:24889069-24889088 | None:intergenic | 50.0% | |
| ATCTCTTAGCACCTTCCAGC+AGG | + | chr7_2:24889076-24889095 | Msa1053990:CDS | 50.0% | |
| ! | GCGAAGTGAGAGAGAGTGTG+TGG | - | chr7_2:24885499-24885518 | None:intergenic | 55.0% |
| TGCTGGGAAACACAGCACGA+GGG | - | chr7_2:24887665-24887684 | None:intergenic | 55.0% | |
| ATGCTGGGAAACACAGCACG+AGG | - | chr7_2:24887666-24887685 | None:intergenic | 55.0% | |
| CGAGGACGACCTACAATGCT+GGG | - | chr7_2:24887681-24887700 | None:intergenic | 55.0% | |
| ACGAGGACGACCTACAATGC+TGG | - | chr7_2:24887682-24887701 | None:intergenic | 55.0% | |
| TCCTCGTCACACTGGTGTGA+TGG | + | chr7_2:24887695-24887714 | Msa1053990:CDS | 55.0% | |
| ACCATCACACCAGTGTGACG+AGG | - | chr7_2:24887699-24887718 | None:intergenic | 55.0% | |
| CGTCACACTGGTGTGATGGT+TGG | + | chr7_2:24887699-24887718 | Msa1053990:CDS | 55.0% | |
| CACTGGTGTGATGGTTGGCA+TGG | + | chr7_2:24887704-24887723 | Msa1053990:CDS | 55.0% | |
| GTGATGAGGCACAGTCCAAG+AGG | + | chr7_2:24887748-24887767 | Msa1053990:CDS | 55.0% | |
| GATGAGGCACAGTCCAAGAG+GGG | + | chr7_2:24887750-24887769 | Msa1053990:CDS | 55.0% | |
| CGTTAGCAACTGGGACGACA+TGG | + | chr7_2:24887809-24887828 | Msa1053990:CDS | 55.0% | |
| TGAGGCTCCTCTCAACCCTA+AGG | + | chr7_2:24887902-24887921 | Msa1053990:CDS | 55.0% | |
| !! | CGATTGGCCTTAGGGTTGAG+AGG | - | chr7_2:24887912-24887931 | None:intergenic | 55.0% |
| GACGAAGGATGGCATGTGGA+AGG | - | chr7_2:24888548-24888567 | None:intergenic | 55.0% | |
| GACCAGCCAGATCAAGACGA+AGG | - | chr7_2:24888563-24888582 | None:intergenic | 55.0% | |
| ! | TCTGAAACGCTCGTCTCCGA+TGG | - | chr7_2:24888784-24888803 | None:intergenic | 55.0% |
| GATGGTTGGAACAGGACCTC+CGG | - | chr7_2:24888810-24888829 | None:intergenic | 55.0% | |
| GGAGGAACAACCATGTTCCC+AGG | + | chr7_2:24888936-24888955 | Msa1053990:CDS | 55.0% | |
| GTCAGCAATGCCTGGGAACA+TGG | - | chr7_2:24888949-24888968 | None:intergenic | 55.0% | |
| GTAGACGATGGCAGACGCTG+AGG | + | chr7_2:24887039-24887058 | Msa1053990:exon | 60.0% | |
| GCTGGGAAACACAGCACGAG+GGG | - | chr7_2:24887664-24887683 | None:intergenic | 60.0% | |
| GTAGGTCGTCCTCGTCACAC+TGG | + | chr7_2:24887687-24887706 | Msa1053990:CDS | 60.0% | |
| TACGCCAGTGGTCGTACCAC+CGG | + | chr7_2:24888011-24888030 | Msa1053990:CDS | 60.0% | |
| CTTACCGGTGGTACGACCAC+TGG | - | chr7_2:24888018-24888037 | None:intergenic | 60.0% | |
| AGCAAGAGCTCGAGACAGCC+AGG | + | chr7_2:24888706-24888725 | Msa1053990:CDS | 60.0% | |
| GCTCTTCTCGACGGATGAGC+TGG | - | chr7_2:24888733-24888752 | None:intergenic | 60.0% | |
| CGAGCGTTTCAGATGTCCGG+AGG | + | chr7_2:24888791-24888810 | Msa1053990:CDS | 60.0% | |
| CTCGACGGATGAGCTGGTCC+TGG | - | chr7_2:24888727-24888746 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 24885414 | 24890046 | 24885414 | ID=Msa1053990;Name=Msa1053990 |
| chr7_2 | mRNA | 24885414 | 24890046 | 24885414 | ID=Msa1053990-mRNA-1;Parent=Msa1053990;Name=Msa1053990-mRNA-1;_AED=0.02;_eAED=0.02;_QI=178|1|1|1|0.75|0.6|5|335|377 |
| chr7_2 | exon | 24885414 | 24885578 | 24885414 | ID=Msa1053990-mRNA-1:exon:5383;Parent=Msa1053990-mRNA-1 |
| chr7_2 | exon | 24887033 | 24887105 | 24887033 | ID=Msa1053990-mRNA-1:exon:5384;Parent=Msa1053990-mRNA-1 |
| chr7_2 | exon | 24887639 | 24888032 | 24887639 | ID=Msa1053990-mRNA-1:exon:5385;Parent=Msa1053990-mRNA-1 |
| chr7_2 | exon | 24888484 | 24889097 | 24888484 | ID=Msa1053990-mRNA-1:exon:5386;Parent=Msa1053990-mRNA-1 |
| chr7_2 | exon | 24889646 | 24890046 | 24889646 | ID=Msa1053990-mRNA-1:exon:5387;Parent=Msa1053990-mRNA-1 |
| chr7_2 | five_prime_UTR | 24885414 | 24885578 | 24885414 | ID=Msa1053990-mRNA-1:five_prime_utr;Parent=Msa1053990-mRNA-1 |
| chr7_2 | five_prime_UTR | 24887033 | 24887045 | 24887033 | ID=Msa1053990-mRNA-1:five_prime_utr;Parent=Msa1053990-mRNA-1 |
| chr7_2 | CDS | 24887046 | 24887105 | 24887046 | ID=Msa1053990-mRNA-1:cds;Parent=Msa1053990-mRNA-1 |
| chr7_2 | CDS | 24887639 | 24888032 | 24887639 | ID=Msa1053990-mRNA-1:cds;Parent=Msa1053990-mRNA-1 |
| chr7_2 | CDS | 24888484 | 24889097 | 24888484 | ID=Msa1053990-mRNA-1:cds;Parent=Msa1053990-mRNA-1 |
| chr7_2 | CDS | 24889646 | 24889711 | 24889646 | ID=Msa1053990-mRNA-1:cds;Parent=Msa1053990-mRNA-1 |
| chr7_2 | three_prime_UTR | 24889712 | 24890046 | 24889712 | ID=Msa1053990-mRNA-1:three_prime_utr;Parent=Msa1053990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
