AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0766760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0766760 MtrunA17_Chr5g0418191 92.857 434 29 2 1 433 1 433 0.0 829
Msa0766760 MtrunA17_Chr4g0042831 55.011 449 110 12 14 432 2 388 1.59e-142 412
Msa0766760 MtrunA17_Chr7g0218081 49.414 512 153 15 21 432 14 519 7.73e-137 402
Msa0766760 MtrunA17_Chr5g0445311 50.000 298 128 7 143 429 191 478 3.97e-81 259
Msa0766760 MtrunA17_Chr7g0263531 49.270 274 117 5 137 397 174 438 5.70e-81 256
Msa0766760 MtrunA17_Chr3g0101131 51.064 282 121 6 144 414 235 510 8.33e-81 260
Msa0766760 MtrunA17_Chr3g0101131 49.425 87 39 3 135 218 398 482 2.72e-16 81.3
Msa0766760 MtrunA17_Chr3g0079691 45.507 345 121 9 137 415 262 605 5.20e-80 261
Msa0766760 MtrunA17_Chr3g0106491 51.575 254 111 4 141 388 187 434 6.92e-78 250
Msa0766760 MtrunA17_Chr7g0243891 54.251 247 99 5 149 393 213 447 1.67e-77 250
Msa0766760 MtrunA17_Chr7g0249311 47.508 301 110 6 132 386 160 458 1.30e-75 248
Msa0766760 MtrunA17_Chr7g0249311 45.349 86 46 1 320 405 179 263 4.93e-15 77.4
Msa0766760 MtrunA17_Chr5g0432161 51.711 263 95 8 147 388 239 490 3.90e-75 245
Msa0766760 MtrunA17_Chr4g0004911 48.913 276 110 9 108 382 153 398 3.78e-72 235
Msa0766760 MtrunA17_Chr7g0249301 42.812 313 116 8 132 382 43 354 4.16e-66 216
Msa0766760 MtrunA17_Chr5g0447701 39.510 286 142 7 121 396 60 324 4.11e-50 174
Msa0766760 MtrunA17_Chr4g0074001 38.956 249 140 6 143 382 176 421 1.88e-48 172
Msa0766760 MtrunA17_Chr4g0074001 56.250 64 27 1 153 215 360 423 2.14e-16 81.3
Msa0766760 MtrunA17_Chr1g0188941 65.854 82 28 0 298 379 29 110 1.20e-35 127
Msa0766760 MtrunA17_Chr1g0188941 54.839 62 27 1 152 212 51 112 1.97e-18 80.9
Msa0766760 MtrunA17_Chr5g0447711 32.479 234 137 4 153 386 84 296 1.19e-32 125
Msa0766760 MtrunA17_Chr5g0447711 39.241 79 47 1 133 210 211 289 1.86e-11 64.7
Msa0766760 MtrunA17_Chr1g0194481 50.877 114 56 0 266 379 104 217 2.29e-32 125
Msa0766760 MtrunA17_Chr1g0194481 58.333 60 24 1 152 210 158 217 6.51e-16 78.6
Msa0766760 MtrunA17_Chr4g0051881 43.056 144 76 1 260 403 118 255 1.78e-31 123
Msa0766760 MtrunA17_Chr4g0051881 60.000 60 23 1 152 210 178 237 2.07e-16 80.1
Msa0766760 MtrunA17_Chr7g0270191 61.176 85 33 0 305 389 130 214 4.37e-30 118
Msa0766760 MtrunA17_Chr7g0270191 53.086 81 28 3 152 231 145 216 1.16e-16 80.1
Msa0766760 MtrunA17_Chr2g0294231 65.789 76 26 0 305 380 188 263 8.49e-29 116
Msa0766760 MtrunA17_Chr2g0294231 60.000 60 23 1 152 210 203 262 1.30e-15 78.2
Msa0766760 MtrunA17_Chr8g0335811 60.241 83 32 1 303 385 137 218 1.60e-28 112
Msa0766760 MtrunA17_Chr8g0335811 63.158 57 20 1 152 207 154 210 1.35e-16 78.6
Msa0766760 MtrunA17_Chr3g0129361 62.162 74 28 0 303 376 127 200 2.22e-28 111
Msa0766760 MtrunA17_Chr3g0129361 50.000 78 33 3 152 227 144 217 7.02e-15 73.6
Msa0766760 MtrunA17_Chr5g0443131 62.667 75 28 0 306 380 143 217 2.96e-28 113
Msa0766760 MtrunA17_Chr5g0443131 58.333 60 24 1 152 210 157 216 4.16e-16 79.0
Msa0766760 MtrunA17_Chr5g0418781 48.649 111 48 1 266 376 79 180 1.05e-26 108
Msa0766760 MtrunA17_Chr5g0418781 58.621 58 23 1 152 208 124 181 5.86e-15 75.1
Msa0766760 MtrunA17_Chr8g0383351 61.333 75 28 1 303 376 142 216 1.47e-26 107
Msa0766760 MtrunA17_Chr8g0383351 45.745 94 44 4 135 225 142 231 3.53e-15 74.7
Msa0766760 MtrunA17_Chr7g0224801 62.162 74 26 1 310 383 83 154 5.42e-26 103
Msa0766760 MtrunA17_Chr7g0224801 56.140 57 24 1 152 207 93 149 1.46e-15 74.3
Msa0766760 MtrunA17_Chr8g0386241 48.315 89 46 0 303 391 86 174 4.40e-25 101
Msa0766760 MtrunA17_Chr8g0386241 45.570 79 41 2 152 229 103 180 3.77e-14 70.5
Msa0766760 MtrunA17_Chr8g0383251 56.164 73 32 0 307 379 95 167 3.40e-24 99.0
Msa0766760 MtrunA17_Chr8g0383251 53.333 60 27 1 152 210 108 167 4.96e-13 67.4
Msa0766760 MtrunA17_Chr6g0485431 57.333 75 31 1 306 379 140 214 6.28e-24 102
Msa0766760 MtrunA17_Chr6g0485431 45.946 74 37 3 145 216 148 220 4.53e-13 70.1
Msa0766760 MtrunA17_Chr7g0248721 45.794 107 43 2 270 376 105 196 6.67e-24 99.0
Msa0766760 MtrunA17_Chr7g0248721 46.429 84 39 3 139 221 128 206 4.16e-15 74.3
Msa0766760 MtrunA17_Chr3g0129321 52.000 75 36 0 306 380 104 178 1.13e-23 98.2
Msa0766760 MtrunA17_Chr3g0129321 53.333 60 27 1 152 210 118 177 5.13e-14 70.9
Msa0766760 MtrunA17_Chr4g0068541 55.405 74 33 0 307 380 195 268 2.08e-23 101
Msa0766760 MtrunA17_Chr4g0068541 61.667 60 22 1 152 210 208 267 2.61e-16 80.5
Msa0766760 MtrunA17_Chr1g0189391 50.538 93 44 2 307 397 84 176 9.69e-23 98.6
Msa0766760 MtrunA17_Chr1g0189391 45.455 77 39 3 152 226 97 172 7.40e-12 66.2
Msa0766760 MtrunA17_Chr3g0099641 48.780 82 41 1 299 379 230 311 1.14e-22 100
Msa0766760 MtrunA17_Chr3g0099641 35.075 134 81 4 95 222 190 323 2.04e-14 75.1
Msa0766760 MtrunA17_Chr1g0150801 54.286 70 32 0 307 376 89 158 1.24e-22 94.0
Msa0766760 MtrunA17_Chr1g0150801 44.444 72 39 1 137 207 87 158 4.58e-13 67.0
Msa0766760 MtrunA17_Chr7g0270831 52.564 78 36 1 307 383 203 280 9.85e-22 97.1
Msa0766760 MtrunA17_Chr7g0270831 51.667 60 27 2 153 210 217 276 1.93e-12 68.6
Msa0766760 MtrunA17_Chr2g0288871 45.455 88 47 1 293 379 278 365 1.13e-21 97.4
Msa0766760 MtrunA17_Chr2g0288871 51.667 60 27 2 153 210 306 365 1.27e-12 69.7
Msa0766760 MtrunA17_Chr4g0025061 49.383 81 40 1 302 381 342 422 2.11e-21 97.1
Msa0766760 MtrunA17_Chr4g0025061 50.000 60 28 2 153 210 361 420 1.81e-11 66.2
Msa0766760 MtrunA17_Chr4g0051181 48.315 89 41 2 297 380 216 304 2.99e-21 95.9
Msa0766760 MtrunA17_Chr4g0051181 52.459 61 27 2 152 210 243 303 2.42e-13 71.6
Msa0766760 MtrunA17_Chr2g0322391 46.067 89 47 1 294 381 323 411 3.45e-21 96.3
Msa0766760 MtrunA17_Chr2g0322391 49.180 61 29 2 152 210 349 409 1.13e-11 66.6
Msa0766760 MtrunA17_Chr4g0075201 47.619 84 43 1 299 381 246 329 3.62e-21 95.9
Msa0766760 MtrunA17_Chr4g0075201 49.180 61 29 2 152 210 267 327 4.54e-12 67.8
Msa0766760 MtrunA17_Chr4g0060271 52.703 74 34 1 307 379 242 315 3.97e-21 95.9
Msa0766760 MtrunA17_Chr4g0060271 52.459 61 27 2 152 210 255 315 1.09e-13 73.2
Msa0766760 MtrunA17_Chr7g0216891 39.496 119 70 2 259 376 159 276 7.75e-21 95.1
Msa0766760 MtrunA17_Chr7g0216891 46.914 81 37 5 134 209 199 278 4.31e-12 68.2
Msa0766760 MtrunA17_Chr5g0432071 64.407 59 21 0 152 210 104 162 8.28e-21 90.5
Msa0766760 MtrunA17_Chr5g0432071 53.226 62 28 1 320 381 104 164 2.38e-15 74.7
Msa0766760 MtrunA17_Chr1g0147881 55.556 81 32 2 302 381 247 324 1.02e-20 92.8
Msa0766760 MtrunA17_Chr1g0147881 50.725 69 31 3 143 209 254 321 8.58e-13 69.3
Msa0766760 MtrunA17_Chr1g0188961 56.579 76 19 1 340 415 3 64 1.25e-20 85.5
Msa0766760 MtrunA17_Chr7g0238921 62.712 59 22 0 318 376 122 180 2.26e-20 91.3
Msa0766760 MtrunA17_Chr7g0238921 60.345 58 22 1 151 207 123 180 1.92e-14 73.9
Msa0766760 MtrunA17_Chr2g0302391 46.237 93 46 2 307 398 198 287 5.91e-20 91.7
Msa0766760 MtrunA17_Chr2g0302391 51.667 60 27 2 153 210 212 271 6.06e-13 70.1
Msa0766760 MtrunA17_Chr2g0333851 56.250 64 27 1 318 380 167 230 6.09e-20 90.1
Msa0766760 MtrunA17_Chr2g0333851 45.333 75 35 3 153 221 170 244 9.86e-13 68.9
Msa0766760 MtrunA17_Chr4g0025051 42.593 108 54 3 278 380 292 396 9.84e-20 91.7
Msa0766760 MtrunA17_Chr3g0136961 36.054 147 62 6 254 376 57 195 1.55e-19 88.6
Msa0766760 MtrunA17_Chr3g0136961 54.386 57 24 2 153 207 139 195 6.02e-14 72.0
Msa0766760 MtrunA17_Chr5g0401821 50.685 73 35 1 317 388 196 268 5.82e-19 86.7
Msa0766760 MtrunA17_Chr5g0401821 46.575 73 37 2 139 209 186 258 2.75e-13 69.7
Msa0766760 MtrunA17_Chr1g0188971 48.101 79 40 1 263 340 4 82 1.57e-18 80.1
Msa0766760 MtrunA17_Chr4g0071521 45.745 94 39 3 284 376 220 302 2.11e-18 85.5
Msa0766760 MtrunA17_Chr4g0071521 47.761 67 32 3 143 207 237 302 9.46e-12 65.9
Msa0766760 MtrunA17_Chr4g0053281 56.061 66 28 1 317 381 263 328 2.15e-18 85.9
Msa0766760 MtrunA17_Chr4g0053281 54.688 64 26 3 148 209 263 325 2.70e-14 73.6
Msa0766760 MtrunA17_Chr1g0150281 49.315 73 34 2 307 376 125 197 2.33e-18 85.1
Msa0766760 MtrunA17_Chr1g0150281 52.632 57 25 2 153 207 141 197 1.53e-13 70.9
Msa0766760 MtrunA17_Chr2g0284321 36.800 125 66 5 150 269 33 149 3.57e-18 82.8
Msa0766760 MtrunA17_Chr2g0284321 43.478 92 50 2 321 411 36 126 7.60e-18 82.0
Msa0766760 MtrunA17_Chr4g0024391 32.000 150 82 4 239 381 155 291 7.18e-18 85.5
Msa0766760 MtrunA17_Chr8g0379461 51.515 66 31 1 321 385 77 142 1.10e-17 82.0
Msa0766760 MtrunA17_Chr8g0379461 49.206 63 30 2 150 210 74 136 2.92e-13 69.3
Msa0766760 MtrunA17_Chr4g0001361 53.968 63 28 1 318 379 160 222 1.29e-17 83.2
Msa0766760 MtrunA17_Chr4g0001361 53.333 60 26 2 153 210 163 222 7.14e-14 72.4
Msa0766760 MtrunA17_Chr7g0270051 50.000 70 34 1 321 389 54 123 2.38e-17 81.6
Msa0766760 MtrunA17_Chr7g0270051 47.826 69 32 3 153 219 54 120 1.86e-11 64.3
Msa0766760 MtrunA17_Chr2g0289181 49.351 77 38 1 309 384 3 79 6.00e-17 79.7
Msa0766760 MtrunA17_Chr2g0289181 52.174 69 31 2 148 214 10 78 1.53e-14 72.8
Msa0766760 MtrunA17_Chr1g0184691 52.113 71 32 2 317 385 290 360 9.14e-17 81.3
Msa0766760 MtrunA17_Chr1g0184691 54.839 62 25 3 148 207 290 350 1.44e-12 68.6
Msa0766760 MtrunA17_Chr7g0248691 44.000 100 53 3 284 382 120 217 9.73e-17 80.9
Msa0766760 MtrunA17_Chr2g0293481 46.341 82 40 2 321 401 268 346 2.26e-16 81.3
Msa0766760 MtrunA17_Chr2g0293481 37.895 95 48 3 118 210 242 327 4.54e-11 64.7
Msa0766760 MtrunA17_Chr6g0468181 61.818 55 21 0 162 216 12 66 2.39e-16 75.1
Msa0766760 MtrunA17_Chr7g0228941 50.820 61 29 1 317 376 49 109 3.42e-16 74.7
Msa0766760 MtrunA17_Chr7g0228941 48.529 68 32 3 143 208 44 110 1.79e-13 67.0
Msa0766760 MtrunA17_Chr2g0319961 49.231 65 32 1 321 384 81 145 5.18e-16 77.8
Msa0766760 MtrunA17_Chr2g0319961 48.485 66 32 2 150 213 78 143 1.41e-13 70.5
Msa0766760 MtrunA17_Chr1g0150271 45.714 70 37 1 311 379 92 161 5.57e-16 77.4
Msa0766760 MtrunA17_Chr1g0150271 34.483 116 69 3 153 261 102 217 8.22e-14 71.2
Msa0766760 MtrunA17_Chr8g0348311 36.792 106 64 3 275 379 112 215 6.72e-16 78.6
Msa0766760 MtrunA17_Chr8g0387501 49.231 65 32 1 319 382 128 192 9.79e-16 77.0
Msa0766760 MtrunA17_Chr8g0387501 44.444 72 36 3 147 216 124 193 3.35e-12 66.6
Msa0766760 MtrunA17_Chr1g0202461 45.946 74 38 2 307 379 249 321 2.36e-15 77.4
Msa0766760 MtrunA17_Chr1g0202461 44.615 65 34 2 148 210 257 321 3.75e-11 64.7
Msa0766760 MtrunA17_Chr3g0139021 43.243 74 41 1 305 377 299 372 1.17e-14 75.5
Msa0766760 MtrunA17_Chr3g0139021 47.761 67 32 3 143 207 306 371 2.95e-11 65.1
Msa0766760 MtrunA17_Chr5g0419241 46.000 50 27 0 297 346 54 103 9.38e-13 64.3
Msa0766760 MtrunA17_Chr3g0126391 46.479 71 33 3 139 205 121 190 1.57e-12 68.6
Msa0766760 MtrunA17_Chr3g0126391 39.560 91 49 3 319 406 132 219 5.50e-12 66.6
Msa0766760 MtrunA17_Chr8g0387981 51.724 58 25 1 320 374 132 189 3.85e-12 67.4
Msa0766760 MtrunA17_Chr8g0387981 49.206 63 28 2 147 205 127 189 1.22e-11 65.9
Msa0766760 MtrunA17_Chr2g0315361 48.333 60 28 1 318 374 146 205 2.73e-11 64.3
Msa0766760 MtrunA17_Chr8g0347251 43.836 73 32 3 151 214 135 207 4.89e-11 63.9
Msa0766760 MtrunA17_Chr7g0275531 45.714 70 32 3 152 215 118 187 5.92e-11 63.5
Msa0766760 MtrunA17_Chr2g0315381 48.333 60 28 1 318 374 142 201 7.47e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0766760 AT1G13960.1 49.234 522 159 16 8 433 3 514 3.70e-135 398
Msa0766760 AT2G03340.1 54.412 408 114 10 71 433 133 513 1.89e-130 386
Msa0766760 AT2G03340.1 65.957 47 12 2 24 66 20 66 7.16e-11 64.7
Msa0766760 AT1G13960.2 57.143 371 116 10 96 433 1 361 1.18e-121 358
Msa0766760 AT3G01080.2 43.215 479 169 17 22 433 18 460 1.34e-92 287
Msa0766760 AT3G01080.1 43.946 446 175 15 22 433 18 422 1.11e-89 278
Msa0766760 AT5G56270.1 48.667 300 108 4 129 382 250 549 1.07e-79 260
Msa0766760 AT2G38470.1 53.759 266 93 7 149 395 181 435 4.75e-79 254
Msa0766760 AT4G26640.5 52.846 246 96 4 151 385 34 270 3.92e-77 245
Msa0766760 AT4G26640.5 48.052 77 39 1 135 210 188 264 1.62e-14 75.1
Msa0766760 AT4G26640.6 52.846 246 96 4 151 385 34 270 3.92e-77 245
Msa0766760 AT4G26640.6 48.052 77 39 1 135 210 188 264 1.62e-14 75.1
Msa0766760 AT4G26640.4 52.846 246 96 4 151 385 34 270 3.92e-77 245
Msa0766760 AT4G26640.4 48.052 77 39 1 135 210 188 264 1.62e-14 75.1
Msa0766760 AT4G26640.3 52.846 246 96 4 151 385 34 270 3.92e-77 245
Msa0766760 AT4G26640.3 48.052 77 39 1 135 210 188 264 1.62e-14 75.1
Msa0766760 AT4G26640.1 54.167 240 102 3 151 385 138 374 2.77e-76 246
Msa0766760 AT4G26640.1 48.052 77 39 1 135 210 292 368 2.34e-14 75.5
Msa0766760 AT4G26640.7 54.167 240 102 3 151 385 170 406 3.24e-76 246
Msa0766760 AT4G26640.7 50.633 79 34 3 135 210 324 400 2.07e-14 75.5
Msa0766760 AT4G26640.2 52.846 246 96 4 151 385 210 446 8.28e-76 246
Msa0766760 AT4G26640.2 50.633 79 34 3 135 210 364 440 2.15e-14 75.5
Msa0766760 AT4G26440.1 48.214 280 113 6 144 394 170 446 3.11e-75 245
Msa0766760 AT5G07100.2 49.167 240 67 4 145 382 17 203 2.08e-70 222
Msa0766760 AT5G07100.2 38.739 111 67 1 105 214 94 204 4.57e-17 80.1
Msa0766760 AT5G07100.2 48.571 70 36 0 320 389 24 93 5.76e-15 74.3
Msa0766760 AT5G07100.4 49.167 240 67 4 145 382 17 203 2.08e-70 222
Msa0766760 AT5G07100.4 38.739 111 67 1 105 214 94 204 4.57e-17 80.1
Msa0766760 AT5G07100.4 48.571 70 36 0 320 389 24 93 5.76e-15 74.3
Msa0766760 AT5G07100.5 49.167 240 67 4 145 382 17 203 2.08e-70 222
Msa0766760 AT5G07100.5 38.739 111 67 1 105 214 94 204 4.57e-17 80.1
Msa0766760 AT5G07100.5 48.571 70 36 0 320 389 24 93 5.76e-15 74.3
Msa0766760 AT5G07100.3 49.167 240 67 4 145 382 17 203 2.08e-70 222
Msa0766760 AT5G07100.3 38.739 111 67 1 105 214 94 204 4.57e-17 80.1
Msa0766760 AT5G07100.3 48.571 70 36 0 320 389 24 93 5.76e-15 74.3
Msa0766760 AT5G07100.1 47.104 259 82 5 126 382 91 296 8.65e-70 223
Msa0766760 AT5G07100.1 38.739 111 67 1 105 214 187 297 1.93e-16 80.1
Msa0766760 AT5G07100.1 40.000 95 46 1 306 389 92 186 1.78e-15 77.4
Msa0766760 AT2G37260.3 44.755 286 105 8 148 399 81 347 1.12e-64 211
Msa0766760 AT2G37260.2 44.755 286 105 8 148 399 79 345 1.19e-64 211
Msa0766760 AT2G37260.1 44.755 286 105 8 148 399 161 427 4.70e-64 212
Msa0766760 AT2G30250.1 43.922 255 129 4 131 381 145 389 1.09e-60 202
Msa0766760 AT2G04880.2 43.580 257 113 8 148 386 107 349 1.25e-59 202
Msa0766760 AT2G04880.2 45.455 99 49 2 151 246 282 378 3.14e-20 93.2
Msa0766760 AT2G04880.1 41.176 272 122 7 148 386 107 373 1.59e-58 199
Msa0766760 AT2G04880.1 45.455 99 49 2 151 246 306 402 3.53e-20 93.2
Msa0766760 AT4G12020.6 47.917 240 103 5 106 340 439 661 8.69e-56 199
Msa0766760 AT4G12020.6 49.180 61 30 1 319 379 467 526 8.83e-12 68.2
Msa0766760 AT4G12020.8 47.917 240 103 5 106 340 439 661 8.69e-56 199
Msa0766760 AT4G12020.8 49.180 61 30 1 319 379 467 526 8.83e-12 68.2
Msa0766760 AT4G12020.10 47.917 240 103 5 106 340 439 661 1.01e-55 199
Msa0766760 AT4G12020.10 49.180 61 30 1 319 379 467 526 9.06e-12 68.2
Msa0766760 AT4G12020.7 47.917 240 103 5 106 340 439 661 1.02e-55 199
Msa0766760 AT4G12020.7 49.180 61 30 1 319 379 467 526 9.08e-12 68.2
Msa0766760 AT4G12020.1 47.917 240 103 5 106 340 439 661 1.11e-55 199
Msa0766760 AT4G12020.1 49.180 61 30 1 319 379 467 526 9.58e-12 67.8
Msa0766760 AT4G12020.9 47.917 240 103 5 106 340 439 661 1.11e-55 199
Msa0766760 AT4G12020.9 49.180 61 30 1 319 379 467 526 9.58e-12 67.8
Msa0766760 AT4G12020.3 47.917 240 103 5 106 340 439 661 1.19e-55 199
Msa0766760 AT4G12020.3 49.180 61 30 1 319 379 467 526 9.56e-12 67.8
Msa0766760 AT4G12020.2 47.917 240 103 5 106 340 439 661 1.21e-55 199
Msa0766760 AT4G12020.2 49.180 61 30 1 319 379 467 526 9.74e-12 67.8
Msa0766760 AT4G12020.11 47.917 240 103 5 106 340 439 661 1.25e-55 199
Msa0766760 AT4G12020.11 49.180 61 30 1 319 379 467 526 1.22e-11 67.4
Msa0766760 AT4G12020.4 47.917 240 103 5 106 340 439 661 1.35e-55 199
Msa0766760 AT4G12020.4 49.180 61 30 1 319 379 467 526 9.73e-12 67.8
Msa0766760 AT4G12020.5 47.917 240 103 5 106 340 372 594 1.45e-55 199
Msa0766760 AT4G12020.5 49.180 61 30 1 319 379 400 459 1.05e-11 67.8
Msa0766760 AT4G30935.1 42.437 238 122 6 150 382 166 393 4.07e-49 174
Msa0766760 AT4G30935.1 56.250 64 27 1 153 215 332 395 1.65e-17 84.7
Msa0766760 AT3G01080.3 40.157 254 88 11 22 215 18 267 1.36e-36 137
Msa0766760 AT3G01080.3 58.333 60 24 1 320 379 205 263 1.37e-15 77.8
Msa0766760 AT4G18170.1 68.000 75 24 0 305 379 157 231 8.36e-31 121
Msa0766760 AT4G18170.1 58.333 60 24 1 152 210 172 231 4.19e-16 79.3
Msa0766760 AT1G29860.1 65.789 76 26 0 305 380 121 196 1.70e-30 119
Msa0766760 AT1G29860.1 58.333 60 24 1 152 210 136 195 5.45e-16 78.6
Msa0766760 AT5G46350.1 62.338 77 29 0 306 382 169 245 5.58e-29 116
Msa0766760 AT5G46350.1 54.545 66 28 2 152 216 183 247 3.21e-15 76.6
Msa0766760 AT2G44745.1 59.036 83 33 1 303 385 128 209 1.76e-28 112
Msa0766760 AT2G44745.1 57.971 69 25 3 152 218 145 211 1.26e-16 79.0
Msa0766760 AT2G47260.1 64.000 75 27 0 305 379 159 233 1.96e-28 115
Msa0766760 AT2G47260.1 58.333 60 24 1 152 210 174 233 2.22e-15 77.4
Msa0766760 AT4G39410.1 64.865 74 26 0 303 376 206 279 2.23e-28 114
Msa0766760 AT4G39410.1 58.621 58 21 2 152 207 223 279 2.48e-13 70.9
Msa0766760 AT5G13080.1 54.878 82 37 0 307 388 54 135 2.43e-27 106
Msa0766760 AT5G13080.1 45.070 71 38 1 152 221 67 137 2.18e-15 73.6
Msa0766760 AT1G69310.4 47.826 115 53 1 262 376 96 203 2.50e-27 110
Msa0766760 AT1G69310.4 60.345 58 22 1 152 208 147 204 7.29e-16 78.2
Msa0766760 AT1G69310.2 47.826 115 53 1 262 376 96 203 2.50e-27 110
Msa0766760 AT1G69310.2 60.345 58 22 1 152 208 147 204 7.29e-16 78.2
Msa0766760 AT1G69310.1 47.826 115 53 1 262 376 96 203 2.50e-27 110
Msa0766760 AT1G69310.1 60.345 58 22 1 152 208 147 204 7.29e-16 78.2
Msa0766760 AT1G64000.1 38.650 163 91 3 219 376 12 170 5.36e-27 107
Msa0766760 AT1G64000.1 49.333 75 35 2 135 207 97 170 1.10e-15 75.9
Msa0766760 AT5G49520.1 62.667 75 28 0 305 379 206 280 9.21e-27 111
Msa0766760 AT5G49520.1 58.333 60 24 1 152 210 221 280 3.20e-15 77.4
Msa0766760 AT5G41570.1 63.380 71 26 0 306 376 84 154 9.47e-27 106
Msa0766760 AT5G41570.1 54.839 62 25 2 148 207 94 154 4.54e-14 70.9
Msa0766760 AT3G01970.1 57.317 82 35 0 307 388 52 133 1.54e-26 104
Msa0766760 AT3G01970.1 47.887 71 36 1 152 221 65 135 1.71e-15 73.9
Msa0766760 AT1G55600.1 57.303 89 38 0 293 381 280 368 2.49e-25 108
Msa0766760 AT1G55600.1 56.923 65 24 3 148 210 304 366 1.39e-13 72.8
Msa0766760 AT5G26170.1 58.571 70 29 0 307 376 100 169 3.17e-25 102
Msa0766760 AT5G26170.1 52.459 61 28 1 152 211 113 173 2.73e-14 71.2
Msa0766760 AT3G62340.1 62.162 74 28 0 306 379 104 177 4.03e-25 104
Msa0766760 AT3G62340.1 58.333 60 24 1 152 210 118 177 6.50e-15 75.1
Msa0766760 AT2G46130.1 60.563 71 28 0 306 376 16 86 4.16e-25 99.4
Msa0766760 AT2G46130.1 59.649 57 22 1 152 207 30 86 1.18e-15 73.2
Msa0766760 AT4G04450.2 45.370 108 58 1 299 405 177 284 1.51e-24 105
Msa0766760 AT4G04450.2 51.667 60 27 2 153 210 199 258 8.28e-13 70.5
Msa0766760 AT4G04450.1 45.370 108 58 1 299 405 271 378 5.16e-24 104
Msa0766760 AT2G21900.1 50.000 76 35 1 309 381 95 170 5.26e-23 96.7
Msa0766760 AT2G21900.1 41.053 95 55 1 143 236 100 194 1.11e-14 73.2
Msa0766760 AT1G69310.3 45.217 115 52 2 262 376 96 199 2.13e-22 97.1
Msa0766760 AT1G69310.3 55.172 58 21 2 152 208 147 200 2.87e-11 64.3
Msa0766760 AT5G64810.1 52.113 71 34 0 307 377 97 167 6.01e-22 93.6
Msa0766760 AT5G64810.1 50.000 60 25 2 152 208 110 167 1.39e-11 63.9
Msa0766760 AT1G62300.1 49.398 83 41 1 298 379 290 372 7.45e-22 98.6
Msa0766760 AT1G62300.1 51.667 60 27 2 153 210 313 372 8.41e-13 70.5
Msa0766760 AT4G22070.4 46.591 88 46 1 293 379 270 357 1.03e-21 97.8
Msa0766760 AT4G22070.4 51.667 60 27 2 153 210 298 357 1.29e-12 70.1
Msa0766760 AT4G22070.3 46.591 88 46 1 293 379 270 357 1.03e-21 97.8
Msa0766760 AT4G22070.3 51.667 60 27 2 153 210 298 357 1.29e-12 70.1
Msa0766760 AT4G22070.2 46.591 88 46 1 293 379 270 357 1.03e-21 97.8
Msa0766760 AT4G22070.2 51.667 60 27 2 153 210 298 357 1.29e-12 70.1
Msa0766760 AT4G22070.1 46.591 88 46 1 293 379 270 357 1.03e-21 97.8
Msa0766760 AT4G22070.1 51.667 60 27 2 153 210 298 357 1.29e-12 70.1
Msa0766760 AT5G15130.2 47.561 82 42 1 303 383 168 249 8.33e-21 95.1
Msa0766760 AT5G15130.2 51.613 62 26 3 152 210 185 245 1.19e-12 70.1
Msa0766760 AT5G15130.1 47.561 82 42 1 303 383 210 291 8.53e-21 95.1
Msa0766760 AT5G15130.1 51.613 62 26 3 152 210 227 287 1.27e-12 70.1
Msa0766760 AT1G68150.1 51.282 78 37 1 307 383 222 299 1.80e-20 92.8
Msa0766760 AT1G68150.1 54.098 61 26 2 152 210 235 295 8.42e-14 73.2
Msa0766760 AT2G46130.2 56.338 71 27 1 306 376 16 82 2.17e-20 86.3
Msa0766760 AT2G46130.2 54.386 57 21 2 152 207 30 82 4.27e-11 60.1
Msa0766760 AT1G18860.1 51.282 78 37 1 303 379 222 299 2.78e-20 93.6
Msa0766760 AT2G25000.2 42.222 90 51 1 293 381 76 165 4.35e-20 89.0
Msa0766760 AT2G25000.2 33.051 118 69 5 153 261 104 220 4.10e-11 63.2
Msa0766760 AT2G25000.4 42.222 90 51 1 293 381 76 165 4.35e-20 89.0
Msa0766760 AT2G25000.4 33.051 118 69 5 153 261 104 220 4.10e-11 63.2
Msa0766760 AT2G25000.3 42.222 90 51 1 293 381 98 187 7.33e-20 89.0
Msa0766760 AT2G25000.3 33.051 118 69 5 153 261 126 242 7.33e-11 62.8
Msa0766760 AT2G25000.1 42.222 90 51 1 293 381 119 208 1.18e-19 89.0
Msa0766760 AT2G25000.1 33.051 118 69 5 153 261 147 263 9.29e-11 62.8
Msa0766760 AT1G80840.1 53.125 64 29 1 318 380 144 207 6.74e-19 87.4
Msa0766760 AT1G80840.1 45.679 81 35 3 153 231 147 220 1.00e-13 72.0
Msa0766760 AT4G31550.1 51.190 84 37 2 302 384 231 311 6.91e-19 87.8
Msa0766760 AT4G31550.1 54.839 62 25 3 148 207 243 303 1.96e-12 68.6
Msa0766760 AT5G43290.1 44.792 96 41 1 293 376 75 170 6.96e-19 86.7
Msa0766760 AT5G43290.1 53.846 78 25 3 151 217 113 190 2.32e-15 76.6
Msa0766760 AT4G31550.2 51.190 84 37 2 302 384 230 310 7.09e-19 87.4
Msa0766760 AT4G31550.2 54.839 62 25 3 148 207 242 302 2.00e-12 68.6
Msa0766760 AT4G31800.2 52.113 71 32 2 313 381 103 173 7.57e-19 85.9
Msa0766760 AT4G31800.2 49.180 61 29 2 153 211 112 172 8.94e-13 68.2
Msa0766760 AT4G23550.1 40.206 97 57 1 287 382 107 203 7.81e-19 87.0
Msa0766760 AT4G23550.1 50.000 60 28 2 153 210 141 200 1.43e-11 65.5
Msa0766760 AT4G31800.1 52.113 71 32 2 313 381 168 238 1.41e-18 86.7
Msa0766760 AT4G31800.1 49.180 61 29 2 153 211 177 237 1.38e-12 68.6
Msa0766760 AT4G01720.1 50.000 74 36 1 307 379 226 299 2.74e-18 87.4
Msa0766760 AT4G01720.1 50.000 62 29 2 151 210 238 299 5.63e-12 67.8
Msa0766760 AT2G23320.1 57.143 63 26 1 317 378 237 299 9.48e-18 84.3
Msa0766760 AT2G23320.1 53.125 64 27 3 148 209 237 299 7.34e-13 69.7
Msa0766760 AT2G30590.1 59.016 61 24 1 317 376 310 370 9.64e-18 85.1
Msa0766760 AT2G30590.1 53.731 67 27 4 148 211 310 375 3.40e-13 71.2
Msa0766760 AT4G24240.1 54.688 64 28 1 316 378 277 340 5.86e-17 82.4
Msa0766760 AT4G24240.1 50.725 69 31 3 143 209 273 340 1.29e-13 72.4
Msa0766760 AT2G24570.1 59.016 61 24 1 317 376 240 300 9.23e-17 81.3
Msa0766760 AT2G24570.1 53.968 63 26 3 148 208 240 301 1.15e-12 68.9
Msa0766760 AT5G28650.1 50.000 72 35 1 317 387 259 330 1.02e-16 81.3
Msa0766760 AT5G28650.1 53.226 62 26 3 148 207 259 319 9.95e-12 66.2
Msa0766760 AT4G01250.1 55.556 63 27 1 318 379 126 188 1.02e-16 80.9
Msa0766760 AT4G01250.1 33.333 126 75 4 153 276 129 247 1.33e-11 65.5
Msa0766760 AT3G04670.1 50.000 72 35 1 317 387 259 330 1.68e-16 80.5
Msa0766760 AT3G04670.1 51.613 62 27 3 148 207 259 319 9.17e-12 66.2
Msa0766760 AT5G52830.1 45.556 90 46 3 307 395 153 240 2.60e-16 80.5
Msa0766760 AT5G52830.1 48.485 66 30 3 153 216 166 229 2.99e-11 65.1
Msa0766760 AT1G30650.1 39.604 101 42 2 321 402 218 318 2.96e-16 80.9
Msa0766760 AT1G30650.1 39.362 94 46 3 119 210 193 277 1.24e-11 66.6
Msa0766760 AT3G58710.2 33.898 118 68 2 280 387 21 138 4.34e-16 78.6
Msa0766760 AT3G58710.2 44.286 70 37 2 150 217 68 137 5.25e-12 66.6
Msa0766760 AT1G29280.1 53.333 60 27 1 321 379 75 134 5.53e-16 78.2
Msa0766760 AT1G29280.1 49.206 63 30 2 150 210 72 134 1.32e-12 68.2
Msa0766760 AT3G58710.1 47.059 68 35 1 321 387 72 139 6.19e-16 78.2
Msa0766760 AT3G58710.1 44.286 70 37 2 150 217 69 138 5.21e-12 66.6
Msa0766760 AT2G34830.1 50.794 63 30 1 321 382 216 278 6.56e-16 79.7
Msa0766760 AT2G34830.1 38.298 94 47 3 119 210 191 275 3.48e-11 65.1
Msa0766760 AT2G34830.2 50.794 63 30 1 321 382 225 287 6.59e-16 79.7
Msa0766760 AT2G34830.2 38.298 94 47 3 119 210 200 284 3.80e-11 65.1
Msa0766760 AT1G69810.2 43.333 90 47 3 307 394 132 219 8.21e-16 78.6
Msa0766760 AT1G69810.2 45.455 66 33 2 148 210 141 206 1.66e-11 65.5
Msa0766760 AT1G69810.1 43.333 90 47 3 307 394 190 277 1.20e-15 78.6
Msa0766760 AT1G69810.1 45.455 66 33 2 148 210 199 264 1.89e-11 65.9
Msa0766760 AT5G45050.4 50.794 63 30 1 321 382 1042 1104 6.88e-15 77.8
Msa0766760 AT5G45050.1 50.794 63 30 1 321 382 1181 1243 7.47e-15 77.8
Msa0766760 AT5G45050.2 50.794 63 30 1 321 382 1153 1215 7.77e-15 77.4
Msa0766760 AT2G40740.1 51.562 64 27 2 146 205 167 230 1.99e-14 73.9
Msa0766760 AT2G40740.3 51.562 64 27 2 146 205 176 239 2.55e-14 73.9
Msa0766760 AT1G66560.1 51.724 58 25 1 320 374 103 160 3.90e-13 69.3
Msa0766760 AT2G46400.1 36.607 112 59 3 266 374 59 161 1.31e-12 68.6
Msa0766760 AT4G11070.2 36.607 112 56 5 126 228 89 194 1.78e-12 68.2
Msa0766760 AT4G11070.1 36.607 112 56 5 126 228 121 226 2.59e-12 67.8
Msa0766760 AT3G56400.1 39.024 82 43 2 312 386 112 193 3.47e-12 67.4
Msa0766760 AT4G23810.1 43.662 71 35 3 139 205 146 215 6.81e-12 66.6
Msa0766760 AT5G24110.1 41.892 74 38 3 136 205 98 170 1.38e-11 65.5
Msa0766760 AT5G45260.1 42.157 102 45 7 121 215 1179 1273 2.95e-11 66.2
Msa0766760 AT5G45260.1 32.258 155 84 6 232 382 1136 1273 7.14e-11 65.1

Find 129 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTCCTGATGATAGAGTTAA+AGG 0.264927 5_2:-28868614 Msa0766760:three_prime_UTR
GATTACCAGAGTCTTAATTT+AGG 0.267358 5_2:+28868721 None:intergenic
TATGTTGTTATGACTGCTTT+AGG 0.286428 5_2:+28868940 None:intergenic
CCTGTTGCCTGACTAGATTC+AGG 0.298032 5_2:+28869772 None:intergenic
GGTTATAGATGGCGAAAATA+TGG 0.304499 5_2:-28869319 Msa0766760:CDS
GGCTACAATTGGAGGAAATA+TGG 0.308838 5_2:-28870057 Msa0766760:CDS
TTTGATCGCTTATTAGGATT+TGG 0.315627 5_2:+28869889 None:intergenic
TATGGACAGAAAGTTGTTAA+AGG 0.320018 5_2:-28869301 Msa0766760:CDS
TAACTGTCCTGTCAAGAAAA+AGG 0.329083 5_2:-28869977 Msa0766760:CDS
AACAACCTGTTGCTCGTCTA+AGG 0.334127 5_2:-28868771 Msa0766760:CDS
ATAACCGCAATTATTTATAA+AGG 0.337197 5_2:-28869931 Msa0766760:CDS
AAGGTTGAGCGTTCGCTTGC+TGG 0.338256 5_2:-28869958 Msa0766760:CDS
CCACCGGTGGTTACCGTTGC+CGG 0.343626 5_2:+28872457 None:intergenic
CTTCAAATGAAAATTCAAAT+AGG 0.350348 5_2:-28869855 Msa0766760:CDS
ATTTCTGATAAGCCTAGTTT+TGG 0.384426 5_2:-28868823 Msa0766760:CDS
CTCTCTAACTTATTTGCTGA+TGG 0.386992 5_2:-28872529 Msa0766760:CDS
ACCGGTGGGTTTGATTCATC+TGG 0.396023 5_2:-28872442 Msa0766760:CDS
TAACTGTGAAGCATTATTGT+TGG 0.399399 5_2:+28868861 None:intergenic
CTTCTTCCTTCCACGGTGGC+CGG 0.401152 5_2:+28872668 None:intergenic
CGCCGGTGCCACGGTGTCTC+CGG 0.408122 5_2:-28872476 Msa0766760:CDS
GCGGCAATTGGCGGTGGCGA+AGG 0.409612 5_2:-28872640 Msa0766760:CDS
TGTATGTTCAACGGTGGAAA+TGG 0.410098 5_2:-28872692 Msa0766760:exon
CACAACATAACATATAGTTT+AGG 0.414108 5_2:+28868451 None:intergenic
GAGGAAATATGGACAGAAAC+AGG 0.418222 5_2:-28870046 Msa0766760:CDS
CATATGATGTAGGTATCCTT+TGG 0.418514 5_2:-28870255 Msa0766760:intron
TTCAGCCTTAGACGAGCAAC+AGG 0.424679 5_2:+28868766 None:intergenic
CGTACGTGGCGGAAGAGTTA+AGG 0.426728 5_2:+28872597 None:intergenic
GCAACAGGTGAACATCTATC+TGG 0.429027 5_2:-28869757 Msa0766760:CDS
AAGTTAGAGAGAAGAGTCAT+AGG 0.429317 5_2:+28872541 None:intergenic
TAAAGGATAACAAGTTTAAA+CGG 0.433002 5_2:-28868597 Msa0766760:three_prime_UTR
ATCGTCTGCGATATAGTTAT+CGG 0.434814 5_2:+28868699 None:intergenic
AAAACTAGGCTTATCAGAAA+TGG 0.435730 5_2:+28868825 None:intergenic
TTGGTAGCATTGGTATTGGC+GGG 0.437748 5_2:-28868804 Msa0766760:CDS
CGGCAATTGGCGGTGGCGAA+GGG 0.447860 5_2:-28872639 Msa0766760:CDS
TCAGGACTTGATCAAAACTT+TGG 0.456319 5_2:+28868629 None:intergenic
TTAAAGGAAATCCTTATCCT+AGG 0.456816 5_2:-28869285 Msa0766760:intron
TATCCTTTAACTCTATCATC+AGG 0.459014 5_2:+28868611 None:intergenic
AGAAGGCTGCAACCTTTGTT+CGG 0.460546 5_2:+28870110 None:intergenic
GGCAATTGGCGGTGGCGAAG+GGG 0.472971 5_2:-28872638 Msa0766760:CDS
GCTTCTTCTTCTTCCTTCCA+CGG 0.479135 5_2:+28872661 None:intergenic
CCACCGTTGAACATACAACT+TGG 0.481070 5_2:+28872698 None:intergenic
GAAGAAGAAGAAGCGGCAAT+TGG 0.481256 5_2:-28872652 Msa0766760:CDS
TTCGGAGAGAAGAGCGTGAT+CGG 0.482911 5_2:+28870128 None:intergenic
GAAGTTGATCTCTTAGATGA+TGG 0.483367 5_2:-28869340 Msa0766760:CDS
TCAGCTTCTCGCCGGTGCCA+CGG 0.484348 5_2:-28872485 Msa0766760:CDS
CCGATGATGGCTACAATTGG+AGG 0.485258 5_2:-28870065 Msa0766760:CDS
CTGTTGCCTGACTAGATTCA+GGG 0.486306 5_2:+28869773 None:intergenic
TTCAAACTCAATGTCTAAGA+TGG 0.487664 5_2:-28869797 Msa0766760:CDS
ACAGTACTATGTGAAGTTGT+TGG 0.490613 5_2:+28869397 None:intergenic
CTGCCGATGATGGCTACAAT+TGG 0.491271 5_2:-28870068 Msa0766760:CDS
GATGGACCCTGAATCTAGTC+AGG 0.493707 5_2:-28869779 Msa0766760:CDS
ATCGATAAGCCTGCCGATGA+TGG 0.494238 5_2:-28870078 Msa0766760:CDS
GAAGCATATCACCTAGGATA+AGG 0.495253 5_2:+28869274 None:intergenic
TCTTAGATGATGGTTATAGA+TGG 0.497586 5_2:-28869330 Msa0766760:CDS
GAATTGAGCCCGACTCCAAA+AGG 0.499145 5_2:-28869681 Msa0766760:CDS
AATGGACCGGCCACCGTGGA+AGG 0.501475 5_2:-28872674 Msa0766760:CDS
CCTGAATCTAGTCAGGCAAC+AGG 0.502478 5_2:-28869772 Msa0766760:CDS
TCCTTCTCTCAGCTTCTCGC+CGG 0.503568 5_2:-28872493 Msa0766760:CDS
GCAGTCATAACAACATATGA+AGG 0.514254 5_2:-28868934 Msa0766760:CDS
TGGCTATTAGTCTTAGCTGC+TGG 0.515585 5_2:+28868892 None:intergenic
TTGGTTAAGCATATTAGTGT+TGG 0.517197 5_2:+28870182 None:intergenic
GAAGAAGAAGCGGCAATTGG+CGG 0.518253 5_2:-28872649 Msa0766760:CDS
GAGAGAAGAGTCATAGGACC+AGG 0.520057 5_2:+28872547 None:intergenic
ATACCAATGCTACCAAAACT+AGG 0.520202 5_2:+28868811 None:intergenic
TGCCGGAGACACCGTGGCAC+CGG 0.525745 5_2:+28872474 None:intergenic
CCTCCAATTGTAGCCATCAT+CGG 0.527967 5_2:+28870065 None:intergenic
TTTGGTAGCATTGGTATTGG+CGG 0.529217 5_2:-28868805 Msa0766760:CDS
GAAGAAGCGGCAATTGGCGG+TGG 0.533119 5_2:-28872646 Msa0766760:CDS
GCAATTGGCGGTGGCGAAGG+GGG 0.539528 5_2:-28872637 Msa0766760:CDS
GTGCACTTGTAATAACTTCG+AGG 0.540882 5_2:+28870006 None:intergenic
CTTAACTCTTCCGCCACGTA+CGG 0.541928 5_2:-28872596 Msa0766760:CDS
TCTTAGCTGCTGGAACATCA+TGG 0.545160 5_2:+28868902 None:intergenic
TGGTACAGACGATAAATGTT+CGG 0.545349 5_2:+28870158 None:intergenic
AGAGCGTGATCGGTGGATGC+TGG 0.546256 5_2:+28870138 None:intergenic
CTCTCCTTTATAAATAATTG+CGG 0.550517 5_2:+28869927 None:intergenic
CAATTGTAGCCATCATCGGC+AGG 0.552856 5_2:+28870069 None:intergenic
AAGCTCCTAAATTAAGACTC+TGG 0.554251 5_2:-28868726 Msa0766760:three_prime_UTR
TGCCACGGTGTCTCCGGCAA+CGG 0.556171 5_2:-28872470 Msa0766760:CDS
GGTAGCATTGGTATTGGCGG+GGG 0.556601 5_2:-28868802 Msa0766760:CDS
GGAGAGAAGAGCGTGATCGG+TGG 0.557382 5_2:+28870131 None:intergenic
CCGGCAACGGTAACCACCGG+TGG 0.560156 5_2:-28872457 Msa0766760:CDS
AAAAGTTGGTGGAGATAACA+GGG 0.561299 5_2:-28868571 Msa0766760:three_prime_UTR
AATGAAAATTCAAATAGGCA+AGG 0.563913 5_2:-28869850 Msa0766760:CDS
ATCTAAGAGATCAACTTCAC+TGG 0.563948 5_2:+28869345 None:intergenic
ATGAAAATTCAAATAGGCAA+GGG 0.564284 5_2:-28869849 Msa0766760:CDS
TTATCGATATTCAACGAAGA+AGG 0.568234 5_2:+28870093 None:intergenic
ACCGGCGAGAAGCTGAGAGA+AGG 0.570158 5_2:+28872492 None:intergenic
GTTAAGGTGGGTCGCTGTGG+TGG 0.571117 5_2:+28872613 None:intergenic
GCAACCACTGGCACAGGTCT+CGG 0.576091 5_2:-28870220 Msa0766760:CDS
ACAGCAGCAACCACTGGCAC+AGG 0.576512 5_2:-28870226 Msa0766760:CDS
GTTCAACGGTGGAAATGGAC+CGG 0.577407 5_2:-28872687 Msa0766760:exon
CAGACGATAAATGTTCGGCT+TGG 0.589162 5_2:+28870163 None:intergenic
AATGACACAGCAGCAACCAC+TGG 0.593965 5_2:-28870232 Msa0766760:CDS
TAATGCAACAAGAAAGTACA+TGG 0.594717 5_2:+28868406 None:intergenic
TTATTTGCTGATGGTGATGA+CGG 0.597799 5_2:-28872520 Msa0766760:CDS
ACGAGTGATAGTGAGGATGT+AGG 0.598153 5_2:-28869733 Msa0766760:CDS
GTGAAAAGTGCGTCCGTACG+TGG 0.598428 5_2:+28872583 None:intergenic
ACGTGGCGGAAGAGTTAAGG+TGG 0.606182 5_2:+28872600 None:intergenic
TGTTGCTCGTCTAAGGCTGA+AGG 0.606467 5_2:-28868764 Msa0766760:CDS
AGGACCAGGGCTAAAACCAC+CGG 0.613111 5_2:+28872561 None:intergenic
TGGTAGCATTGGTATTGGCG+GGG 0.613610 5_2:-28868803 Msa0766760:CDS
TATGGACAGAAACAGGTGAA+AGG 0.615984 5_2:-28870039 Msa0766760:CDS
AGAGTTAAGGTGGGTCGCTG+TGG 0.617498 5_2:+28872610 None:intergenic
ATCTGGAACGAGTGATAGTG+AGG 0.619905 5_2:-28869740 Msa0766760:CDS
CATTATTGTTGGCAATAGTG+TGG 0.625832 5_2:+28868872 None:intergenic
ATAATTTCGATGTACACAGA+AGG 0.627379 5_2:+28868527 None:intergenic
ACGCTCTTCTCTCCGAACAA+AGG 0.627646 5_2:-28870122 Msa0766760:CDS
TGCTTTCGAACGTTACAACT+CGG 0.628437 5_2:+28868985 None:intergenic
ACCAGATGAATCAAACCCAC+CGG 0.631315 5_2:+28872441 None:intergenic
AAAGTTGGTGGAGATAACAG+GGG 0.637324 5_2:-28868570 Msa0766760:three_prime_UTR
TGATAACAAGACAAACTCAA+AGG 0.638305 5_2:-28872856 Msa0766760:five_prime_UTR
TCTCCGGCAACGGTAACCAC+CGG 0.638389 5_2:-28872460 Msa0766760:CDS
TGAGCCGAGACCTGTGCCAG+TGG 0.639541 5_2:+28870216 None:intergenic
GTGCTGATTCAACTTATCAA+CGG 0.645507 5_2:-28869825 Msa0766760:CDS
AAACCAAGTTGTATGTTCAA+CGG 0.645642 5_2:-28872701 Msa0766760:five_prime_UTR
GTGGAAGGAAGAAGAAGAAG+CGG 0.649666 5_2:-28872659 Msa0766760:CDS
CGGCAACGGTAACCACCGGT+GGG 0.654733 5_2:-28872456 Msa0766760:CDS
AGGTGATCGTGAAACAGAAG+TGG 0.657969 5_2:-28869713 Msa0766760:CDS
TGGAAATGGACCGGCCACCG+TGG 0.658433 5_2:-28872678 Msa0766760:exon
TTGCTGCTGTGTCATTCCAA+AGG 0.666392 5_2:+28870239 None:intergenic
CCAAGTTGTATGTTCAACGG+TGG 0.671405 5_2:-28872698 Msa0766760:five_prime_UTR
AGAGAAGAGTCATAGGACCA+GGG 0.673747 5_2:+28872548 None:intergenic
GCACAGGTCTCGGCTCACGA+AGG 0.675781 5_2:-28870210 Msa0766760:CDS
AAAAGTGCGTCCGTACGTGG+CGG 0.684333 5_2:+28872586 None:intergenic
TTGAGCCCGACTCCAAAAGG+AGG 0.687140 5_2:-28869678 Msa0766760:intron
CGTGGCGGAAGAGTTAAGGT+GGG 0.691075 5_2:+28872601 None:intergenic
AGATGAATCAAACCCACCGG+TGG 0.700312 5_2:+28872444 None:intergenic
TCTTCTTCTTCCTTCCACGG+TGG 0.700627 5_2:+28872664 None:intergenic
TACCGTTGCCGGAGACACCG+TGG 0.716633 5_2:+28872468 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTTTTTTAGAAAATATA+TGG + chr5_2:28869488-28869507 None:intergenic 10.0%
!! AAAAATTACATAGAAATGAA+GGG + chr5_2:28869406-28869425 None:intergenic 15.0%
!! AAAAAATTACATAGAAATGA+AGG + chr5_2:28869407-28869426 None:intergenic 15.0%
!! ATAGTAATATTTCCAAATTT+GGG + chr5_2:28869944-28869963 None:intergenic 15.0%
!! TTTATAATAGAAAAACTCAA+GGG + chr5_2:28870770-28870789 None:intergenic 15.0%
!!! TTTTATAATAGAAAAACTCA+AGG + chr5_2:28870771-28870790 None:intergenic 15.0%
!!! CTTCTTTTTCTTTTTGTTTT+TGG - chr5_2:28868566-28868585 Msa0766760:three_prime_UTR 20.0%
!! TTAACACTTATATATAACAG+TGG + chr5_2:28868968-28868987 None:intergenic 20.0%
!! ACAATGCATTATTATATGTA+GGG - chr5_2:28869069-28869088 Msa0766760:intron 20.0%
!!! CTTCTCTACATATTTTTTTT+TGG + chr5_2:28869146-28869165 None:intergenic 20.0%
!!! ACTTTTTGAAAGAGTTTAAA+TGG - chr5_2:28869293-28869312 Msa0766760:CDS 20.0%
!!! TTAAAATATTCCTACACTTT+TGG - chr5_2:28869909-28869928 Msa0766760:CDS 20.0%
!! GATAGTAATATTTCCAAATT+TGG + chr5_2:28869945-28869964 None:intergenic 20.0%
!! AAAAAAGAGATTATCTAAAG+TGG + chr5_2:28870072-28870091 None:intergenic 20.0%
!! ATGATAAAGGGAAAAAAAAA+AGG + chr5_2:28870470-28870489 None:intergenic 20.0%
!! AATTAGTAATTAATATCGAC+AGG + chr5_2:28870867-28870886 None:intergenic 20.0%
!! TTACTACTTAAAAGTTAATG+AGG - chr5_2:28870969-28870988 Msa0766760:intron 20.0%
!! ATAACCGCAATTATTTATAA+AGG - chr5_2:28871370-28871389 Msa0766760:intron 20.0%
!! CTTCAAATGAAAATTCAAAT+AGG - chr5_2:28871446-28871465 Msa0766760:intron 20.0%
!! TTTACAACTTTGACATATAT+CGG + chr5_2:28871670-28871689 None:intergenic 20.0%
!! TATATGTCAAAGTTGTAAAT+AGG - chr5_2:28871671-28871690 Msa0766760:intron 20.0%
!!! TTGTATTTAGTTCATTAATC+AGG + chr5_2:28871743-28871762 None:intergenic 20.0%
!!! CAGTATTTACAACATTTTTA+TGG - chr5_2:28871787-28871806 Msa0766760:intron 20.0%
!!! TGTTTTCTTACATAATGTTT+AGG - chr5_2:28872272-28872291 Msa0766760:intron 20.0%
!!! TTCTATTCTTTTTCAGTTTT+AGG - chr5_2:28872649-28872668 Msa0766760:CDS 20.0%
!! TAAAGGATAACAAGTTTAAA+CGG - chr5_2:28872704-28872723 Msa0766760:five_prime_UTR 20.0%
! GACAATGCATTATTATATGT+AGG - chr5_2:28869068-28869087 Msa0766760:intron 25.0%
! CAATGCATTATTATATGTAG+GGG - chr5_2:28869070-28869089 Msa0766760:intron 25.0%
!!! CTACATATTTTTTTTTGGTC+AGG + chr5_2:28869141-28869160 None:intergenic 25.0%
! ATTTGATATAGTGATCCAAT+AGG - chr5_2:28869575-28869594 Msa0766760:intron 25.0%
!!! ATATTCGTTTTCCTTGTTTT+TGG + chr5_2:28869612-28869631 None:intergenic 25.0%
!!! GATATTGTTTTATTGACATG+TGG + chr5_2:28869778-28869797 None:intergenic 25.0%
!! ACAATATCTGAAATACAACT+TGG - chr5_2:28869790-28869809 Msa0766760:CDS 25.0%
!! GTAAATTTATCCAAAAGTGT+AGG + chr5_2:28869922-28869941 None:intergenic 25.0%
! TGGATAAATTTACCCAAATT+TGG - chr5_2:28869929-28869948 Msa0766760:CDS 25.0%
! ACGAAATTCTTATAAGCTAT+AGG + chr5_2:28870266-28870285 None:intergenic 25.0%
! GTTAGAAACTAATTCAAACT+AGG - chr5_2:28870320-28870339 Msa0766760:intron 25.0%
! TCAATATTCCCTTCATTTAA+GGG - chr5_2:28870371-28870390 Msa0766760:intron 25.0%
!!! GTTCTAAAAAGTGAACTTTA+TGG - chr5_2:28870825-28870844 Msa0766760:intron 25.0%
! ATGGTTATTCATGTTAATGT+GGG - chr5_2:28870910-28870929 Msa0766760:intron 25.0%
!! TAGATTATAGAAGCATAGTT+AGG - chr5_2:28870997-28871016 Msa0766760:intron 25.0%
! CTCTCCTTTATAAATAATTG+CGG + chr5_2:28871377-28871396 None:intergenic 25.0%
! AATGAAAATTCAAATAGGCA+AGG - chr5_2:28871451-28871470 Msa0766760:intron 25.0%
! ATGAAAATTCAAATAGGCAA+GGG - chr5_2:28871452-28871471 Msa0766760:intron 25.0%
! ACAATAACAAGACAACATAA+AGG + chr5_2:28871846-28871865 None:intergenic 25.0%
! TAAATAAGCCAAATTTAACG+AGG + chr5_2:28872104-28872123 None:intergenic 25.0%
!!! GATTTTGCTTATAGTTTGTA+CGG - chr5_2:28872191-28872210 Msa0766760:intron 25.0%
! ATAAATGAGACACACTATTA+GGG + chr5_2:28872225-28872244 None:intergenic 25.0%
! AGTTTAAACGGAAAAAAAGT+TGG - chr5_2:28872716-28872735 Msa0766760:five_prime_UTR 25.0%
! CACAACATAACATATAGTTT+AGG + chr5_2:28872853-28872872 None:intergenic 25.0%
TGATAACAAGACAAACTCAA+AGG - chr5_2:28868445-28868464 Msa0766760:three_prime_UTR 30.0%
AAACCAAGTTGTATGTTCAA+CGG - chr5_2:28868600-28868619 Msa0766760:three_prime_UTR 30.0%
ATAAACAAAGATTTCACCTG+AGG + chr5_2:28868898-28868917 None:intergenic 30.0%
!!! TCCTTTTAAATTTCTAGCGA+CGG - chr5_2:28869261-28869280 Msa0766760:intron 30.0%
! TTGATTTTGCGATCCAAAAA+AGG - chr5_2:28869351-28869370 Msa0766760:CDS 30.0%
CTATCAACTTCTACTTACAT+GGG + chr5_2:28869541-28869560 None:intergenic 30.0%
ACTATCAACTTCTACTTACA+TGG + chr5_2:28869542-28869561 None:intergenic 30.0%
TTGGATCACTATATCAAATG+AGG + chr5_2:28869574-28869593 None:intergenic 30.0%
CGGCTAAAAAATGATTTGAT+TGG + chr5_2:28869695-28869714 None:intergenic 30.0%
!!! ATCATTTTTTAGCCGTTTTG+AGG - chr5_2:28869700-28869719 Msa0766760:CDS 30.0%
! TTTTATTGACATGTGGTCTA+TGG + chr5_2:28869771-28869790 None:intergenic 30.0%
TTGGTAAAAGCTCTTAAATC+TGG - chr5_2:28869809-28869828 Msa0766760:CDS 30.0%
TGGTAAAAGCTCTTAAATCT+GGG - chr5_2:28869810-28869829 Msa0766760:CDS 30.0%
TACTAACAGACAAGTAAATG+TGG + chr5_2:28869862-28869881 None:intergenic 30.0%
GTTGACAAGATTATCTAAAG+TGG + chr5_2:28870113-28870132 None:intergenic 30.0%
GTCAATATTCCCTTCATTTA+AGG - chr5_2:28870370-28870389 Msa0766760:intron 30.0%
CAATATTCCCTTCATTTAAG+GGG - chr5_2:28870372-28870391 Msa0766760:intron 30.0%
AATATTCCCTTCATTTAAGG+GGG - chr5_2:28870373-28870392 Msa0766760:intron 30.0%
! TTTTCCCTTTATCATGAAAC+AGG - chr5_2:28870475-28870494 Msa0766760:intron 30.0%
TGCATAGATCTAAACTATGT+AGG + chr5_2:28870535-28870554 None:intergenic 30.0%
GTGTCAAATATGCTCTATTT+AGG - chr5_2:28870636-28870655 Msa0766760:intron 30.0%
TTTAGGTCAGAAATATCCAA+GGG + chr5_2:28870662-28870681 None:intergenic 30.0%
! GATATTTCTGACCTAAAGTT+AGG - chr5_2:28870665-28870684 Msa0766760:intron 30.0%
GTGTCAAATATGCTGTATTT+AGG - chr5_2:28870744-28870763 Msa0766760:intron 30.0%
GAATAACCATCATTAGTAGT+CGG + chr5_2:28870900-28870919 None:intergenic 30.0%
GATGGTTATTCATGTTAATG+TGG - chr5_2:28870909-28870928 Msa0766760:intron 30.0%
AGTTAACCTGATTATACTTG+AGG - chr5_2:28870938-28870957 Msa0766760:intron 30.0%
ATACATCCTCAAGTATAATC+AGG + chr5_2:28870947-28870966 None:intergenic 30.0%
TTGGTTAAGCATATTAGTGT+TGG + chr5_2:28871122-28871141 None:intergenic 30.0%
TTATCGATATTCAACGAAGA+AGG + chr5_2:28871211-28871230 None:intergenic 30.0%
TTTGATCGCTTATTAGGATT+TGG + chr5_2:28871415-28871434 None:intergenic 30.0%
TTCAAACTCAATGTCTAAGA+TGG - chr5_2:28871504-28871523 Msa0766760:intron 30.0%
! TACAAAAACTTACCTCCTTT+TGG + chr5_2:28871638-28871657 None:intergenic 30.0%
! TCTTAGATGATGGTTATAGA+TGG - chr5_2:28871971-28871990 Msa0766760:intron 30.0%
TATGGACAGAAAGTTGTTAA+AGG - chr5_2:28872000-28872019 Msa0766760:intron 30.0%
TTAAAGGAAATCCTTATCCT+AGG - chr5_2:28872016-28872035 Msa0766760:intron 30.0%
CAATAGGTGAAATTAAAGTG+TGG + chr5_2:28872057-28872076 None:intergenic 30.0%
ATTCACGAATAGTTCACAAT+AGG + chr5_2:28872073-28872092 None:intergenic 30.0%
AATCGATGAACATGAAAAGT+TGG + chr5_2:28872171-28872190 None:intergenic 30.0%
GATAAATGAGACACACTATT+AGG + chr5_2:28872226-28872245 None:intergenic 30.0%
TATGTTGTTATGACTGCTTT+AGG + chr5_2:28872364-28872383 None:intergenic 30.0%
! TAACTGTGAAGCATTATTGT+TGG + chr5_2:28872443-28872462 None:intergenic 30.0%
AAAACTAGGCTTATCAGAAA+TGG + chr5_2:28872479-28872498 None:intergenic 30.0%
! ATTTCTGATAAGCCTAGTTT+TGG - chr5_2:28872478-28872497 Msa0766760:CDS 30.0%
GATTACCAGAGTCTTAATTT+AGG + chr5_2:28872583-28872602 None:intergenic 30.0%
TATCCTTTAACTCTATCATC+AGG + chr5_2:28872693-28872712 None:intergenic 30.0%
TTAAACGGAAAAAAAGTTGG+TGG - chr5_2:28872719-28872738 Msa0766760:five_prime_UTR 30.0%
ATAATTTCGATGTACACAGA+AGG + chr5_2:28872777-28872796 None:intergenic 30.0%
AAGTTAGAGAGAAGAGTCAT+AGG + chr5_2:28868763-28868782 None:intergenic 35.0%
! CTCTCTAACTTATTTGCTGA+TGG - chr5_2:28868772-28868791 Msa0766760:CDS 35.0%
! TTATTTGCTGATGGTGATGA+CGG - chr5_2:28868781-28868800 Msa0766760:CDS 35.0%
AGGATCAAATCAAACGCAAT+TGG + chr5_2:28869245-28869264 None:intergenic 35.0%
TCCGTCGCTAGAAATTTAAA+AGG + chr5_2:28869265-28869284 None:intergenic 35.0%
!!! TTTTAAATTTCTAGCGACGG+AGG - chr5_2:28869264-28869283 Msa0766760:intron 35.0%
ACATAGAAATGAAGGGCAAA+CGG + chr5_2:28869399-28869418 None:intergenic 35.0%
AGTCAGTTTGACCAAAAACA+AGG - chr5_2:28869598-28869617 Msa0766760:intron 35.0%
GACCTTGGAATTCTACATAA+AGG - chr5_2:28869728-28869747 Msa0766760:CDS 35.0%
CACCTTTATGTAGAATTCCA+AGG + chr5_2:28869733-28869752 None:intergenic 35.0%
AGTAATTTCACCGCAAAGTT+TGG - chr5_2:28869878-28869897 Msa0766760:CDS 35.0%
AATTCCTGAACCAAACTTTG+CGG + chr5_2:28869891-28869910 None:intergenic 35.0%
AACAGTGATTCTAGTGTGTT+TGG + chr5_2:28869979-28869998 None:intergenic 35.0%
TTACTGTGGGCAAAACATTT+GGG + chr5_2:28870035-28870054 None:intergenic 35.0%
TTTACTGTGGGCAAAACATT+TGG + chr5_2:28870036-28870055 None:intergenic 35.0%
! TAGTACTTGAGGCATTATCA+AGG + chr5_2:28870428-28870447 None:intergenic 35.0%
TGCAGAAAAGTTAGTACTTG+AGG + chr5_2:28870439-28870458 None:intergenic 35.0%
CTTTAGGTCAGAAATATCCA+AGG + chr5_2:28870663-28870682 None:intergenic 35.0%
TTCCATGAATCACAACATAG+GGG + chr5_2:28870805-28870824 None:intergenic 35.0%
CTTCCATGAATCACAACATA+GGG + chr5_2:28870806-28870825 None:intergenic 35.0%
ACTTCCATGAATCACAACAT+AGG + chr5_2:28870807-28870826 None:intergenic 35.0%
CAATATCCACCATATGATGT+AGG - chr5_2:28871036-28871055 Msa0766760:intron 35.0%
CAAAGGATACCTACATCATA+TGG + chr5_2:28871048-28871067 None:intergenic 35.0%
CATATGATGTAGGTATCCTT+TGG - chr5_2:28871046-28871065 Msa0766760:intron 35.0%
TGGTACAGACGATAAATGTT+CGG + chr5_2:28871146-28871165 None:intergenic 35.0%
! TTTTTCTTGACAGGACAGTT+AGG + chr5_2:28871325-28871344 None:intergenic 35.0%
TAACTGTCCTGTCAAGAAAA+AGG - chr5_2:28871324-28871343 Msa0766760:intron 35.0%
! GTGTCTTTTGATCGCTTATT+AGG + chr5_2:28871421-28871440 None:intergenic 35.0%
!! GTGCTGATTCAACTTATCAA+CGG - chr5_2:28871476-28871495 Msa0766760:intron 35.0%
GTTCATTAATCAGGTGCATT+GGG + chr5_2:28871734-28871753 None:intergenic 35.0%
AGTTCATTAATCAGGTGCAT+TGG + chr5_2:28871735-28871754 None:intergenic 35.0%
CATAAAGGCAAAGGATTACT+CGG + chr5_2:28871831-28871850 None:intergenic 35.0%
ACAAGACAACATAAAGGCAA+AGG + chr5_2:28871840-28871859 None:intergenic 35.0%
ACAGTACTATGTGAAGTTGT+TGG + chr5_2:28871907-28871926 None:intergenic 35.0%
!! GTAGTTTGCACGATGATTTT+AGG + chr5_2:28871937-28871956 None:intergenic 35.0%
ATCTAAGAGATCAACTTCAC+TGG + chr5_2:28871959-28871978 None:intergenic 35.0%
! GAAGTTGATCTCTTAGATGA+TGG - chr5_2:28871961-28871980 Msa0766760:intron 35.0%
GGTTATAGATGGCGAAAATA+TGG - chr5_2:28871982-28872001 Msa0766760:intron 35.0%
TAGGTGAAATTAAAGTGTGG+AGG + chr5_2:28872054-28872073 None:intergenic 35.0%
TGAACTATTCGTGAATGTTG+TGG - chr5_2:28872077-28872096 Msa0766760:intron 35.0%
GCAGTCATAACAACATATGA+AGG - chr5_2:28872367-28872386 Msa0766760:intron 35.0%
CATTATTGTTGGCAATAGTG+TGG + chr5_2:28872432-28872451 None:intergenic 35.0%
ATACCAATGCTACCAAAACT+AGG + chr5_2:28872493-28872512 None:intergenic 35.0%
!!! AGTTTTGGTAGCATTGGTAT+TGG - chr5_2:28872493-28872512 Msa0766760:CDS 35.0%
AAGCTCCTAAATTAAGACTC+TGG - chr5_2:28872575-28872594 Msa0766760:CDS 35.0%
ATCGTCTGCGATATAGTTAT+CGG + chr5_2:28872605-28872624 None:intergenic 35.0%
TCAGGACTTGATCAAAACTT+TGG + chr5_2:28872675-28872694 None:intergenic 35.0%
AGTCCTGATGATAGAGTTAA+AGG - chr5_2:28872687-28872706 Msa0766760:exon 35.0%
!! AAAAAGTTGGTGGAGATAAC+AGG - chr5_2:28872729-28872748 Msa0766760:five_prime_UTR 35.0%
!! AAAAGTTGGTGGAGATAACA+GGG - chr5_2:28872730-28872749 Msa0766760:five_prime_UTR 35.0%
TGTATGTTCAACGGTGGAAA+TGG - chr5_2:28868609-28868628 Msa0766760:three_prime_UTR 40.0%
! TGGTTTCTTTTCACATCCTC+AGG - chr5_2:28868879-28868898 Msa0766760:CDS 40.0%
GCATTATTATATGTAGGGGC+CGG - chr5_2:28869074-28869093 Msa0766760:intron 40.0%
CATTATTATATGTAGGGGCC+GGG - chr5_2:28869075-28869094 Msa0766760:intron 40.0%
ATTATTATATGTAGGGGCCG+GGG - chr5_2:28869076-28869095 Msa0766760:intron 40.0%
!!! TGCACTGCACTAACCTTTTT+TGG + chr5_2:28869367-28869386 None:intergenic 40.0%
ATAGAAATGAAGGGCAAACG+GGG + chr5_2:28869397-28869416 None:intergenic 40.0%
CATAGAAATGAAGGGCAAAC+GGG + chr5_2:28869398-28869417 None:intergenic 40.0%
! TTGGTCAAACTGACTCCTAT+TGG + chr5_2:28869593-28869612 None:intergenic 40.0%
!!! TTTTAGCCGTTTTGAGGTAG+AGG - chr5_2:28869706-28869725 Msa0766760:CDS 40.0%
CCTGCCTGTTTCATGATAAA+GGG + chr5_2:28870482-28870501 None:intergenic 40.0%
TCCTGCCTGTTTCATGATAA+AGG + chr5_2:28870483-28870502 None:intergenic 40.0%
ATATGCTCTATTTAGGCCCT+TGG - chr5_2:28870643-28870662 Msa0766760:intron 40.0%
TCTGACCTAAAGTTAGGCTT+AGG - chr5_2:28870671-28870690 Msa0766760:intron 40.0%
GTGAACCTAAGCCTAACTTT+AGG + chr5_2:28870679-28870698 None:intergenic 40.0%
TACCCCTATGTTGTGATTCA+TGG - chr5_2:28870800-28870819 Msa0766760:intron 40.0%
! TTGATGCCGACTACTAATGA+TGG - chr5_2:28870891-28870910 Msa0766760:intron 40.0%
AGGATACCTACATCATATGG+TGG + chr5_2:28871045-28871064 None:intergenic 40.0%
GGCTACAATTGGAGGAAATA+TGG - chr5_2:28871244-28871263 Msa0766760:intron 40.0%
GAGGAAATATGGACAGAAAC+AGG - chr5_2:28871255-28871274 Msa0766760:intron 40.0%
TATGGACAGAAACAGGTGAA+AGG - chr5_2:28871262-28871281 Msa0766760:intron 40.0%
GTGCACTTGTAATAACTTCG+AGG + chr5_2:28871298-28871317 None:intergenic 40.0%
!!! AACTTACCTCCTTTTGGAGT+CGG + chr5_2:28871632-28871651 None:intergenic 40.0%
GAAGCATATCACCTAGGATA+AGG + chr5_2:28872030-28872049 None:intergenic 40.0%
GTTGTGGACCTCGTTAAATT+TGG - chr5_2:28872093-28872112 Msa0766760:intron 40.0%
TGCTTTCGAACGTTACAACT+CGG + chr5_2:28872319-28872338 None:intergenic 40.0%
!!! AAGCCTAGTTTTGGTAGCAT+TGG - chr5_2:28872487-28872506 Msa0766760:CDS 40.0%
!! TTTGGTAGCATTGGTATTGG+CGG - chr5_2:28872496-28872515 Msa0766760:CDS 40.0%
!! AAAGTTGGTGGAGATAACAG+GGG - chr5_2:28872731-28872750 Msa0766760:five_prime_UTR 40.0%
CCACCGTTGAACATACAACT+TGG + chr5_2:28868606-28868625 None:intergenic 45.0%
CCAAGTTGTATGTTCAACGG+TGG - chr5_2:28868603-28868622 Msa0766760:three_prime_UTR 45.0%
GCTTCTTCTTCTTCCTTCCA+CGG + chr5_2:28868643-28868662 None:intergenic 45.0%
GTGGAAGGAAGAAGAAGAAG+CGG - chr5_2:28868642-28868661 Msa0766760:three_prime_UTR 45.0%
GAAGAAGAAGAAGCGGCAAT+TGG - chr5_2:28868649-28868668 Msa0766760:three_prime_UTR 45.0%
AGAGAAGAGTCATAGGACCA+GGG + chr5_2:28868756-28868775 None:intergenic 45.0%
ACCAGATGAATCAAACCCAC+CGG + chr5_2:28868863-28868882 None:intergenic 45.0%
TTGCCTAGTGGCTAGAAAGT+GGG + chr5_2:28869118-28869137 None:intergenic 45.0%
!! TTTTTGGTCAGGTTGCCTAG+TGG + chr5_2:28869130-28869149 None:intergenic 45.0%
!! TGTCTCGTGTCATTTGCAGT+AGG - chr5_2:28869166-28869185 Msa0766760:intron 45.0%
!! TGTCTCGTGTCATTTGCAGT+AGG - chr5_2:28869166-28869185 Msa0766760:intron 45.0%
CAAGGTCCTCTACCTCAAAA+CGG + chr5_2:28869715-28869734 None:intergenic 45.0%
! TTCACCGCAAAGTTTGGTTC+AGG - chr5_2:28869884-28869903 Msa0766760:CDS 45.0%
! GTTTTGCCCACAGTAAAGCT+TGG - chr5_2:28870039-28870058 Msa0766760:CDS 45.0%
CCTCTTCCAAGCTTTACTGT+GGG + chr5_2:28870048-28870067 None:intergenic 45.0%
ACCTCTTCCAAGCTTTACTG+TGG + chr5_2:28870049-28870068 None:intergenic 45.0%
CAGTCACCCCCTTAAATGAA+GGG + chr5_2:28870382-28870401 None:intergenic 45.0%
ACAGTCACCCCCTTAAATGA+AGG + chr5_2:28870383-28870402 None:intergenic 45.0%
CCCTTTATCATGAAACAGGC+AGG - chr5_2:28870479-28870498 Msa0766760:intron 45.0%
ACGGAGACACGTCTAATTTC+AGG + chr5_2:28870569-28870588 None:intergenic 45.0%
TATCAAGACACCAATGCACG+TGG + chr5_2:28870594-28870613 None:intergenic 45.0%
! ACGTGCATTGGTGTCTTGAT+AGG - chr5_2:28870593-28870612 Msa0766760:intron 45.0%
! TTGCTGCTGTGTCATTCCAA+AGG + chr5_2:28871065-28871084 None:intergenic 45.0%
CAGACGATAAATGTTCGGCT+TGG + chr5_2:28871141-28871160 None:intergenic 45.0%
AGAAGGCTGCAACCTTTGTT+CGG + chr5_2:28871194-28871213 None:intergenic 45.0%
CCTCCAATTGTAGCCATCAT+CGG + chr5_2:28871239-28871258 None:intergenic 45.0%
! CGCTCAACCTTTTTCTTGAC+AGG + chr5_2:28871334-28871353 None:intergenic 45.0%
CTGTTGCCTGACTAGATTCA+GGG + chr5_2:28871531-28871550 None:intergenic 45.0%
GCAACAGGTGAACATCTATC+TGG - chr5_2:28871544-28871563 Msa0766760:intron 45.0%
! ATCTGGAACGAGTGATAGTG+AGG - chr5_2:28871561-28871580 Msa0766760:intron 45.0%
! ACGAGTGATAGTGAGGATGT+AGG - chr5_2:28871568-28871587 Msa0766760:intron 45.0%
AGGTGATCGTGAAACAGAAG+TGG - chr5_2:28871588-28871607 Msa0766760:intron 45.0%
!!! ACTTACCTCCTTTTGGAGTC+GGG + chr5_2:28871631-28871650 None:intergenic 45.0%
TCTTAGCTGCTGGAACATCA+TGG + chr5_2:28872402-28872421 None:intergenic 45.0%
!! TGGCTATTAGTCTTAGCTGC+TGG + chr5_2:28872412-28872431 None:intergenic 45.0%
!! TTGGTAGCATTGGTATTGGC+GGG - chr5_2:28872497-28872516 Msa0766760:CDS 45.0%
AACAACCTGTTGCTCGTCTA+AGG - chr5_2:28872530-28872549 Msa0766760:CDS 45.0%
GTTCAACGGTGGAAATGGAC+CGG - chr5_2:28868614-28868633 Msa0766760:three_prime_UTR 50.0%
TCTTCTTCTTCCTTCCACGG+TGG + chr5_2:28868640-28868659 None:intergenic 50.0%
GAAGAAGAAGCGGCAATTGG+CGG - chr5_2:28868652-28868671 Msa0766760:three_prime_UTR 50.0%
CTTAACTCTTCCGCCACGTA+CGG - chr5_2:28868705-28868724 Msa0766760:three_prime_UTR 50.0%
GAGAGAAGAGTCATAGGACC+AGG + chr5_2:28868757-28868776 None:intergenic 50.0%
AGATGAATCAAACCCACCGG+TGG + chr5_2:28868860-28868879 None:intergenic 50.0%
! ACCGGTGGGTTTGATTCATC+TGG - chr5_2:28868859-28868878 Msa0766760:CDS 50.0%
TACCAACCGAGCTATGCTCA+CGG + chr5_2:28869047-28869066 None:intergenic 50.0%
TGCCTAGTGGCTAGAAAGTG+GGG + chr5_2:28869117-28869136 None:intergenic 50.0%
GTTGCCTAGTGGCTAGAAAG+TGG + chr5_2:28869119-28869138 None:intergenic 50.0%
!!! CGTTTTGAGGTAGAGGACCT+TGG - chr5_2:28869713-28869732 Msa0766760:CDS 50.0%
GGGCAAAACATTTGGGTCTC+TGG + chr5_2:28870028-28870047 None:intergenic 50.0%
CCCACAGTAAAGCTTGGAAG+AGG - chr5_2:28870045-28870064 Msa0766760:CDS 50.0%
AATGACACAGCAGCAACCAC+TGG - chr5_2:28871069-28871088 Msa0766760:intron 50.0%
! TTCGGAGAGAAGAGCGTGAT+CGG + chr5_2:28871176-28871195 None:intergenic 50.0%
ACGCTCTTCTCTCCGAACAA+AGG - chr5_2:28871179-28871198 Msa0766760:intron 50.0%
ATCGATAAGCCTGCCGATGA+TGG - chr5_2:28871223-28871242 Msa0766760:intron 50.0%
CAATTGTAGCCATCATCGGC+AGG + chr5_2:28871235-28871254 None:intergenic 50.0%
! CTGCCGATGATGGCTACAAT+TGG - chr5_2:28871233-28871252 Msa0766760:intron 50.0%
! CCGATGATGGCTACAATTGG+AGG - chr5_2:28871236-28871255 Msa0766760:intron 50.0%
GATGGACCCTGAATCTAGTC+AGG - chr5_2:28871522-28871541 Msa0766760:intron 50.0%
CCTGTTGCCTGACTAGATTC+AGG + chr5_2:28871532-28871551 None:intergenic 50.0%
CCTGAATCTAGTCAGGCAAC+AGG - chr5_2:28871529-28871548 Msa0766760:intron 50.0%
GAATTGAGCCCGACTCCAAA+AGG - chr5_2:28871620-28871639 Msa0766760:intron 50.0%
! GGAGGAGAAGCATATCACCT+AGG + chr5_2:28872036-28872055 None:intergenic 50.0%
!! TGGTAGCATTGGTATTGGCG+GGG - chr5_2:28872498-28872517 Msa0766760:CDS 50.0%
TTCAGCCTTAGACGAGCAAC+AGG + chr5_2:28872538-28872557 None:intergenic 50.0%
! TGTTGCTCGTCTAAGGCTGA+AGG - chr5_2:28872537-28872556 Msa0766760:CDS 50.0%
AGAGTTAAGGTGGGTCGCTG+TGG + chr5_2:28868694-28868713 None:intergenic 55.0%
! CGTGGCGGAAGAGTTAAGGT+GGG + chr5_2:28868703-28868722 None:intergenic 55.0%
! ACGTGGCGGAAGAGTTAAGG+TGG + chr5_2:28868704-28868723 None:intergenic 55.0%
! CGTACGTGGCGGAAGAGTTA+AGG + chr5_2:28868707-28868726 None:intergenic 55.0%
! AAAAGTGCGTCCGTACGTGG+CGG + chr5_2:28868718-28868737 None:intergenic 55.0%
! GTGAAAAGTGCGTCCGTACG+TGG + chr5_2:28868721-28868740 None:intergenic 55.0%
! CGTACGGACGCACTTTTCAC+CGG - chr5_2:28868721-28868740 Msa0766760:three_prime_UTR 55.0%
!!! TTCACCGGTGGTTTTAGCCC+TGG - chr5_2:28868736-28868755 Msa0766760:exon 55.0%
AGGACCAGGGCTAAAACCAC+CGG + chr5_2:28868743-28868762 None:intergenic 55.0%
TCCTTCTCTCAGCTTCTCGC+CGG - chr5_2:28868808-28868827 Msa0766760:CDS 55.0%
AGTGTCCCGTGAGCATAGCT+CGG - chr5_2:28869038-28869057 Msa0766760:intron 55.0%
ACCAACCGAGCTATGCTCAC+GGG + chr5_2:28869046-28869065 None:intergenic 55.0%
GTGAGCATAGCTCGGTTGGT+AGG - chr5_2:28869046-28869065 Msa0766760:intron 55.0%
! GCTAGAAAGTGGGGTGTCCA+GGG + chr5_2:28869108-28869127 None:intergenic 55.0%
! CACCCCACTTTCTAGCCACT+AGG - chr5_2:28869112-28869131 Msa0766760:intron 55.0%
GACACCAATGCACGTGGACA+CGG + chr5_2:28870588-28870607 None:intergenic 55.0%
AAGGTTGAGCGTTCGCTTGC+TGG - chr5_2:28871343-28871362 Msa0766760:intron 55.0%
TTGAGCCCGACTCCAAAAGG+AGG - chr5_2:28871623-28871642 Msa0766760:intron 55.0%
!! GGTAGCATTGGTATTGGCGG+GGG - chr5_2:28872499-28872518 Msa0766760:CDS 55.0%
CTTCTTCCTTCCACGGTGGC+CGG + chr5_2:28868636-28868655 None:intergenic 60.0%
GAAGAAGCGGCAATTGGCGG+TGG - chr5_2:28868655-28868674 Msa0766760:three_prime_UTR 60.0%
GTTAAGGTGGGTCGCTGTGG+TGG + chr5_2:28868691-28868710 None:intergenic 60.0%
! ACGGACGCACTTTTCACCGG+TGG - chr5_2:28868724-28868743 Msa0766760:three_prime_UTR 60.0%
ACCGGCGAGAAGCTGAGAGA+AGG + chr5_2:28868812-28868831 None:intergenic 60.0%
TCTCCGGCAACGGTAACCAC+CGG - chr5_2:28868841-28868860 Msa0766760:CDS 60.0%
TCCCGTGAGCATAGCTCGGT+TGG - chr5_2:28869042-28869061 Msa0766760:intron 60.0%
! GGCTAGAAAGTGGGGTGTCC+AGG + chr5_2:28869109-28869128 None:intergenic 60.0%
GTCTCCGTGTCCACGTGCAT+TGG - chr5_2:28870581-28870600 Msa0766760:intron 60.0%
ACAGCAGCAACCACTGGCAC+AGG - chr5_2:28871075-28871094 Msa0766760:intron 60.0%
GCAACCACTGGCACAGGTCT+CGG - chr5_2:28871081-28871100 Msa0766760:intron 60.0%
AGAGCGTGATCGGTGGATGC+TGG + chr5_2:28871166-28871185 None:intergenic 60.0%
! GGAGAGAAGAGCGTGATCGG+TGG + chr5_2:28871173-28871192 None:intergenic 60.0%
TGGAAATGGACCGGCCACCG+TGG - chr5_2:28868623-28868642 Msa0766760:three_prime_UTR 65.0%
AATGGACCGGCCACCGTGGA+AGG - chr5_2:28868627-28868646 Msa0766760:three_prime_UTR 65.0%
CGGCAATTGGCGGTGGCGAA+GGG - chr5_2:28868662-28868681 Msa0766760:three_prime_UTR 65.0%
GGCAATTGGCGGTGGCGAAG+GGG - chr5_2:28868663-28868682 Msa0766760:three_prime_UTR 65.0%
GCAATTGGCGGTGGCGAAGG+GGG - chr5_2:28868664-28868683 Msa0766760:three_prime_UTR 65.0%
! TCAGCTTCTCGCCGGTGCCA+CGG - chr5_2:28868816-28868835 Msa0766760:CDS 65.0%
TGCCACGGTGTCTCCGGCAA+CGG - chr5_2:28868831-28868850 Msa0766760:CDS 65.0%
TACCGTTGCCGGAGACACCG+TGG + chr5_2:28868836-28868855 None:intergenic 65.0%
CCACCGGTGGTTACCGTTGC+CGG + chr5_2:28868847-28868866 None:intergenic 65.0%
CGGCAACGGTAACCACCGGT+GGG - chr5_2:28868845-28868864 Msa0766760:CDS 65.0%
GGTGTCCAGGGTTCGAACCC+CGG + chr5_2:28869096-28869115 None:intergenic 65.0%
TGAGCCGAGACCTGTGCCAG+TGG + chr5_2:28871088-28871107 None:intergenic 65.0%
GCACAGGTCTCGGCTCACGA+AGG - chr5_2:28871091-28871110 Msa0766760:intron 65.0%
GCGGCAATTGGCGGTGGCGA+AGG - chr5_2:28868661-28868680 Msa0766760:three_prime_UTR 70.0%
TGCCGGAGACACCGTGGCAC+CGG + chr5_2:28868830-28868849 None:intergenic 70.0%
CCGGCAACGGTAACCACCGG+TGG - chr5_2:28868844-28868863 Msa0766760:CDS 70.0%
!! CGCCGGTGCCACGGTGTCTC+CGG - chr5_2:28868825-28868844 Msa0766760:CDS 75.0%
AGGGGCCGGGGTTCGAACCC+TGG - chr5_2:28869088-28869107 Msa0766760:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 28868414 28872909 28868414 ID=Msa0766760;Name=Msa0766760
chr5_2 mRNA 28868414 28872909 28868414 ID=Msa0766760-mRNA-1;Parent=Msa0766760;Name=Msa0766760-mRNA-1;_AED=0.00;_eAED=0.00;_QI=214|1|1|1|1|1|4|333|433
chr5_2 exon 28868414 28869029 28868414 ID=Msa0766760-mRNA-1:exon:11090;Parent=Msa0766760-mRNA-1
chr5_2 exon 28869286 28869444 28869286 ID=Msa0766760-mRNA-1:exon:11089;Parent=Msa0766760-mRNA-1
chr5_2 exon 28869679 28870265 28869679 ID=Msa0766760-mRNA-1:exon:11088;Parent=Msa0766760-mRNA-1
chr5_2 exon 28872423 28872909 28872423 ID=Msa0766760-mRNA-1:exon:11087;Parent=Msa0766760-mRNA-1
chr5_2 five_prime_UTR 28872696 28872909 28872696 ID=Msa0766760-mRNA-1:five_prime_utr;Parent=Msa0766760-mRNA-1
chr5_2 CDS 28872423 28872695 28872423 ID=Msa0766760-mRNA-1:cds;Parent=Msa0766760-mRNA-1
chr5_2 CDS 28869679 28870265 28869679 ID=Msa0766760-mRNA-1:cds;Parent=Msa0766760-mRNA-1
chr5_2 CDS 28869286 28869444 28869286 ID=Msa0766760-mRNA-1:cds;Parent=Msa0766760-mRNA-1
chr5_2 CDS 28868747 28869029 28868747 ID=Msa0766760-mRNA-1:cds;Parent=Msa0766760-mRNA-1
chr5_2 three_prime_UTR 28868414 28868746 28868414 ID=Msa0766760-mRNA-1:three_prime_utr;Parent=Msa0766760-mRNA-1
Gene Sequence

>Msa0766760

ATGGACCGGCCACCGTGGAAGGAAGAAGAAGAAGCGGCAATTGGCGGTGGCGAAGGGGGACCACCACAGCGACCCACCTTAACTCTTCCGCCACGTACGGACGCACTTTTCACCGGTGGTTTTAGCCCTGGTCCTATGACTCTTCTCTCTAACTTATTTGCTGATGGTGATGACGGCAAGTCCTTCTCTCAGCTTCTCGCCGGTGCCACGGTGTCTCCGGCAACGGTAACCACCGGTGGGTTTGATTCATCTGGTTTCTTTTCACATCCTCAGGTATCCTTTGGAATGACACAGCAGCAACCACTGGCACAGGTCTCGGCTCACGAAGGACAATCCAACACTAATATGCTTAACCAAGCCGAACATTTATCGTCTGTACCAGCATCCACCGATCACGCTCTTCTCTCCGAACAAAGGTTGCAGCCTTCTTCGTTGAATATCGATAAGCCTGCCGATGATGGCTACAATTGGAGGAAATATGGACAGAAACAGGTGAAAGGTAGTGAGTTTCCTCGAAGTTATTACAAGTGCACGCATCCTAACTGTCCTGTCAAGAAAAAGGTTGAGCGTTCGCTTGCTGGTCATATAACCGCAATTATTTATAAAGGAGAGCACAATCATCAACTTCCAAATCCTAATAAGCGATCAAAAGACACTATAACTTCAAATGAAAATTCAAATAGGCAAGGGAGTGCTGATTCAACTTATCAACGGATGACTTCAAACTCAATGTCTAAGATGGACCCTGAATCTAGTCAGGCAACAGGTGAACATCTATCTGGAACGAGTGATAGTGAGGATGTAGGTGATCGTGAAACAGAAGTGGATGAGAAAAGAATTGAGCCCGACTCCAAAAGGAGACATACAGAAGTCACAGTCTCAAATCCAACAACTTCACATAGTACTGTCACAGAGCCTAAAATCATCGTGCAAACTACCAGTGAAGTTGATCTCTTAGATGATGGTTATAGATGGCGAAAATATGGACAGAAAGTTGTTAAAGGAAATCCTTATCCTAGGAGCTATTACAAATGTACAACACCGAGTTGTAACGTTCGAAAGCATGTAGAGAGAGCATCGACAGATCCTAAAGCAGTCATAACAACATATGAAGGAAAACATAACCATGATGTTCCAGCAGCTAAGACTAATAGCCACACTATTGCCAACAATAATGCTTCACAGTTAAAATCGCAAAATACCATTTCTGATAAGCCTAGTTTTGGTAGCATTGGTATTGGCGGGGGCAATGAGCAACAACCTGTTGCTCGTCTAAGGCTGAAGGAAGAGCAGATAACTTAA
Protein sequence

>Msa0766760

MDRPPWKEEEEAAIGGGEGGPPQRPTLTLPPRTDALFTGGFSPGPMTLLSNLFADGDDGKSFSQLLAGATVSPATVTTGGFDSSGFFSHPQVSFGMTQQQPLAQVSAHEGQSNTNMLNQAEHLSSVPASTDHALLSEQRLQPSSLNIDKPADDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLAGHITAIIYKGEHNHQLPNPNKRSKDTITSNENSNRQGSADSTYQRMTSNSMSKMDPESSQATGEHLSGTSDSEDVGDRETEVDEKRIEPDSKRRHTEVTVSNPTTSHSTVTEPKIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPSCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTIANNNASQLKSQNTISDKPSFGSIGIGGGNEQQPVARLRLKEEQIT*