Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302530 | XP_003597364.2 | 89.271 | 727 | 22 | 3 | 1 | 671 | 1 | 727 | 0.0 | 1313 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302530 | sp|Q6R0E3|TRP5_ARATH | 47.971 | 419 | 148 | 13 | 283 | 658 | 225 | 616 | 1.21e-92 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021220 | Msa0302530 | 0.834428 | 3.014283e-56 | -8.615850e-47 |
| Msa0030200 | Msa0302530 | 0.802950 | 4.397664e-49 | -8.615850e-47 |
| Msa0139350 | Msa0302530 | 0.812223 | 4.724186e-51 | -8.615850e-47 |
| Msa0141660 | Msa0302530 | 0.847560 | 1.070204e-59 | -8.615850e-47 |
| Msa0223160 | Msa0302530 | 0.961915 | 2.935427e-120 | -8.615850e-47 |
| Msa0264460 | Msa0302530 | 0.884929 | 1.259277e-71 | -8.615850e-47 |
| Msa0279240 | Msa0302530 | 0.804119 | 2.516620e-49 | -8.615850e-47 |
| Msa0302530 | Msa0339700 | 0.958685 | 1.276175e-116 | -8.615850e-47 |
| Msa0302530 | Msa0343620 | 0.830589 | 2.697250e-55 | -8.615850e-47 |
| Msa0302530 | Msa0482130 | 0.827764 | 1.306279e-54 | -8.615850e-47 |
| Msa0302530 | Msa0500470 | 0.818108 | 2.327836e-52 | -8.615850e-47 |
| Msa0302530 | Msa0581280 | 0.801253 | 9.826617e-49 | -8.615850e-47 |
| Msa0302530 | Msa0665100 | 0.802412 | 5.679004e-49 | -8.615850e-47 |
| Msa0302530 | Msa0745740 | 0.841229 | 5.394218e-58 | -8.615850e-47 |
| Msa0302530 | Msa0755700 | 0.803073 | 4.149184e-49 | -8.615850e-47 |
| Msa0302530 | Msa0826990 | 0.830373 | 3.046713e-55 | -8.615850e-47 |
| Msa0302530 | Msa0862530 | 0.800084 | 1.701292e-48 | -8.615850e-47 |
| Msa0302530 | Msa1083970 | 0.807483 | 4.944051e-50 | -8.615850e-47 |
| Msa0302530 | Msa1153060 | 0.822649 | 2.116019e-53 | -8.615850e-47 |
| Msa0302530 | Msa1160590 | 0.802123 | 6.512486e-49 | -8.615850e-47 |
| Msa0302530 | Msa1174470 | 0.806738 | 7.108594e-50 | -8.615850e-47 |
| Msa0302530 | Msa1179070 | 0.808878 | 2.494915e-50 | -8.615850e-47 |
| Msa0302530 | Msa1209200 | 0.800693 | 1.278443e-48 | -8.615850e-47 |
| Msa0302530 | Msa1209260 | 0.802135 | 6.477618e-49 | -8.615850e-47 |
| Msa0302530 | Msa1224590 | 0.803384 | 3.576628e-49 | -8.615850e-47 |
| Msa0302530 | Msa1237630 | 0.807540 | 4.808903e-50 | -8.615850e-47 |
| Msa0302530 | Msa1237700 | 0.822201 | 2.688615e-53 | -8.615850e-47 |
| Msa0302530 | Msa1266990 | 0.801379 | 9.256890e-49 | -8.615850e-47 |
| Msa0302530 | Msa1275980 | 0.803981 | 2.689151e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302530 | MtrunA17_Chr2g0328331 | 89.271 | 727 | 22 | 3 | 1 | 671 | 1 | 727 | 0.0 | 1313 |
| Msa0302530 | MtrunA17_Chr3g0111941 | 39.407 | 472 | 214 | 9 | 248 | 670 | 183 | 631 | 3.96e-83 | 275 |
| Msa0302530 | MtrunA17_Chr5g0435351 | 41.781 | 438 | 177 | 10 | 283 | 663 | 189 | 605 | 1.82e-76 | 256 |
| Msa0302530 | MtrunA17_Chr7g0238741 | 39.865 | 444 | 173 | 12 | 269 | 654 | 196 | 603 | 3.35e-72 | 245 |
| Msa0302530 | MtrunA17_Chr7g0238741 | 41.346 | 104 | 50 | 4 | 1 | 98 | 1 | 99 | 1.03e-11 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0302530 | AT1G07540.1 | 47.971 | 419 | 148 | 13 | 283 | 658 | 225 | 616 | 1.23e-93 | 303 |
| Msa0302530 | AT1G07540.1 | 56.140 | 57 | 24 | 1 | 1 | 57 | 1 | 56 | 4.92e-11 | 66.2 |
| Msa0302530 | AT3G46590.5 | 45.763 | 413 | 148 | 15 | 276 | 653 | 124 | 495 | 4.23e-86 | 280 |
| Msa0302530 | AT3G46590.1 | 46.247 | 413 | 146 | 16 | 276 | 653 | 164 | 535 | 1.12e-85 | 280 |
| Msa0302530 | AT3G12560.1 | 39.958 | 478 | 195 | 10 | 230 | 658 | 163 | 597 | 1.33e-85 | 281 |
| Msa0302530 | AT3G12560.2 | 39.958 | 478 | 195 | 10 | 230 | 658 | 163 | 597 | 1.33e-85 | 281 |
| Msa0302530 | AT3G46590.2 | 45.763 | 413 | 148 | 15 | 276 | 653 | 165 | 536 | 1.43e-85 | 279 |
| Msa0302530 | AT3G46590.3 | 45.521 | 413 | 143 | 15 | 276 | 653 | 165 | 530 | 1.61e-84 | 276 |
| Msa0302530 | AT5G13820.2 | 37.732 | 485 | 222 | 12 | 240 | 671 | 177 | 634 | 6.79e-77 | 259 |
| Msa0302530 | AT5G13820.1 | 37.732 | 485 | 222 | 12 | 240 | 671 | 177 | 634 | 6.79e-77 | 259 |
| Msa0302530 | AT5G59430.3 | 40.741 | 459 | 173 | 17 | 241 | 654 | 148 | 552 | 1.38e-74 | 251 |
| Msa0302530 | AT5G59430.2 | 40.351 | 456 | 173 | 17 | 241 | 651 | 148 | 549 | 4.30e-72 | 244 |
| Msa0302530 | AT5G59430.1 | 40.351 | 456 | 173 | 17 | 241 | 651 | 148 | 549 | 4.30e-72 | 244 |
| Msa0302530 | AT5G59430.5 | 40.351 | 456 | 173 | 17 | 241 | 651 | 148 | 549 | 4.30e-72 | 244 |
| Msa0302530 | AT5G59430.4 | 40.351 | 456 | 173 | 17 | 241 | 651 | 147 | 548 | 4.96e-72 | 244 |
| Msa0302530 | AT3G53790.1 | 40.520 | 269 | 84 | 6 | 424 | 651 | 163 | 396 | 1.11e-46 | 170 |
| Msa0302530 | AT3G46590.4 | 47.458 | 236 | 88 | 9 | 276 | 509 | 165 | 366 | 1.36e-46 | 170 |
Find 165 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTGATCATTTCTTATTT+TGG | 0.137908 | 2_3:-59327952 | Msa0302530:five_prime_UTR |
| GAATATTCATTTGAGATATT+TGG | 0.208514 | 2_3:+59326637 | None:intergenic |
| TAAAGTAGAAGGCAAGTTTC+AGG | 0.226508 | 2_3:+59324238 | None:intergenic |
| ATTACTAGTAAAGTTGAATT+AGG | 0.235538 | 2_3:-59327239 | Msa0302530:CDS |
| GGCTATTTCTTGTAAGTAAA+TGG | 0.236955 | 2_3:-59323950 | Msa0302530:three_prime_UTR |
| GCCTGTTCCTCAAGAACTTT+TGG | 0.237700 | 2_3:-59324332 | Msa0302530:CDS |
| TCTCAGTTCGCTTTGGCTTC+TGG | 0.241253 | 2_3:+59325291 | None:intergenic |
| GAAGCAACAGTTGCAGTTTC+AGG | 0.244154 | 2_3:+59326173 | None:intergenic |
| AGGAATAGTTACAAGTTCTT+TGG | 0.254884 | 2_3:+59325352 | None:intergenic |
| TGACCCTGCCAGTCTCAATT+TGG | 0.255588 | 2_3:+59327997 | None:intergenic |
| AGTCCCTCCGTATCCATTTC+AGG | 0.264251 | 2_3:+59325332 | None:intergenic |
| TCAACTTCGGCAACAGAAAA+AGG | 0.271689 | 2_3:+59325242 | None:intergenic |
| AATGTGTGCGATTGACTTAT+TGG | 0.277403 | 2_3:-59327690 | Msa0302530:CDS |
| ATTTGATAATGCAGGATAAA+TGG | 0.287402 | 2_3:-59324405 | Msa0302530:intron |
| GGTAAGCTTTGCGAAGAATT+AGG | 0.294244 | 2_3:+59325908 | None:intergenic |
| TTATGGATTTGTTGGCTATC+AGG | 0.301924 | 2_3:-59327891 | Msa0302530:CDS |
| TGATAACCAGCTGGATGCTT+TGG | 0.304017 | 2_3:-59325945 | Msa0302530:CDS |
| AAATGGTTTATATGCAATAA+AGG | 0.304781 | 2_3:-59323933 | Msa0302530:three_prime_UTR |
| GCTTCCAAGGATGACTTTCC+AGG | 0.307385 | 2_3:+59326378 | None:intergenic |
| ACTATGGTTCTTTCCCTGTT+TGG | 0.311608 | 2_3:-59323976 | Msa0302530:three_prime_UTR |
| AGGATAGATTATGGATTTGT+TGG | 0.319703 | 2_3:-59327899 | Msa0302530:CDS |
| ATTGGTTTGGTTAGGTGTTA+AGG | 0.324737 | 2_3:-59324167 | Msa0302530:three_prime_UTR |
| TGAATGGTTTGTTTGCATCT+AGG | 0.330283 | 2_3:+59327567 | None:intergenic |
| TTGCCTTCTACTTTAATATG+AGG | 0.339068 | 2_3:-59324230 | Msa0302530:exon |
| CTGTCACAACTAGCTTCATT+AGG | 0.344968 | 2_3:+59327533 | None:intergenic |
| GTATAGGTGATCAAAGAATA+AGG | 0.363994 | 2_3:-59326893 | Msa0302530:CDS |
| AAGAAATAGCCTCTCCAAAC+AGG | 0.368417 | 2_3:+59323962 | None:intergenic |
| AATTCGCATCTTGAAATTGA+TGG | 0.376266 | 2_3:-59327362 | Msa0302530:CDS |
| TTGGCATGGTTTCTGAGATA+TGG | 0.379971 | 2_3:-59327933 | Msa0302530:exon |
| CCTTGATTCGTGTCATTGTT+GGG | 0.381125 | 2_3:+59326531 | None:intergenic |
| CCTCAAGCGCCAATAGGTTT+AGG | 0.381466 | 2_3:-59327074 | Msa0302530:CDS |
| TCCAAAAGTTCTTGAGGAAC+AGG | 0.384204 | 2_3:+59324331 | None:intergenic |
| GATAACCAGCTGGATGCTTT+GGG | 0.385054 | 2_3:-59325944 | Msa0302530:CDS |
| GGTGGCAATGCCAAGTTGTC+GGG | 0.385312 | 2_3:-59327053 | Msa0302530:CDS |
| AATGGTTTATATGCAATAAA+GGG | 0.385969 | 2_3:-59323932 | Msa0302530:three_prime_UTR |
| ACTTGTAACTATTCCTGAAA+TGG | 0.387283 | 2_3:-59325345 | Msa0302530:CDS |
| CGCTTTGGCTTCTGGTTCAC+TGG | 0.388587 | 2_3:+59325299 | None:intergenic |
| CCTTCTTCTATCAATACATT+AGG | 0.390584 | 2_3:-59325395 | Msa0302530:CDS |
| CATCTCTAAGTTTCTTTCCA+TGG | 0.391295 | 2_3:+59326002 | None:intergenic |
| GCATTGCCACCTAAACCTAT+TGG | 0.392718 | 2_3:+59327065 | None:intergenic |
| ATGTGAGATCGGAGTATATT+CGG | 0.393206 | 2_3:+59329148 | None:intergenic |
| GCGCAGAAGAGGATAGATTA+TGG | 0.397692 | 2_3:-59327908 | Msa0302530:CDS |
| GTTGCTTTGTTTGTTGCTGT+TGG | 0.399464 | 2_3:+59324278 | None:intergenic |
| TGCAACTGTTGCTTCCTTGA+AGG | 0.401829 | 2_3:-59326165 | Msa0302530:intron |
| AGTAAAACTCTACTTCAAAC+TGG | 0.401926 | 2_3:-59325977 | Msa0302530:CDS |
| CATTATCCTTGCTCACACTA+TGG | 0.402352 | 2_3:-59323992 | Msa0302530:three_prime_UTR |
| TCCTCACTGCTCATGCATAT+TGG | 0.404954 | 2_3:-59324303 | Msa0302530:CDS |
| AACTCCACTTCAAATTCTAA+TGG | 0.407925 | 2_3:-59326585 | Msa0302530:CDS |
| AAAGATTGGCTTCTAAATAT+CGG | 0.408174 | 2_3:-59326869 | Msa0302530:CDS |
| TATACAATTCTTTGATCTAA+AGG | 0.408351 | 2_3:+59326911 | None:intergenic |
| CATCAAATGAATCGAAATTA+CGG | 0.408813 | 2_3:+59329111 | None:intergenic |
| CGTGTGGCACGCGGCTTTGT+TGG | 0.410650 | 2_3:+59327866 | None:intergenic |
| TTCAACGACTTATTTGCATC+CGG | 0.411417 | 2_3:+59327476 | None:intergenic |
| TTGCTTTGTTTGTTGCTGTT+GGG | 0.413177 | 2_3:+59324279 | None:intergenic |
| TTTAGATCAAAGAATTGTAT+AGG | 0.421024 | 2_3:-59326909 | Msa0302530:CDS |
| TGTGAGATCTCAGTTCGCTT+TGG | 0.423608 | 2_3:+59325284 | None:intergenic |
| TGGTCCACAGAAAGCAGTTA+TGG | 0.424624 | 2_3:-59326074 | Msa0302530:intron |
| GAAGAAAATTCTGTGGGAAA+AGG | 0.426060 | 2_3:-59329071 | Msa0302530:intron |
| GGATGCTTTGGGCTTCACCT+TGG | 0.427101 | 2_3:-59325933 | Msa0302530:CDS |
| GATCCGTCACCAGGTGTGAT+TGG | 0.433742 | 2_3:+59327626 | None:intergenic |
| CTTTGTAGATTGGTTTGGTT+AGG | 0.439650 | 2_3:-59324175 | Msa0302530:three_prime_UTR |
| ATCTACAAAGTCACATCATA+TGG | 0.440519 | 2_3:+59324188 | None:intergenic |
| GCTTCAACACAGATTTGTTA+AGG | 0.440987 | 2_3:-59327507 | Msa0302530:CDS |
| ACCTTGATTCGTGTCATTGT+TGG | 0.442882 | 2_3:+59326530 | None:intergenic |
| CAATAAAGTGCCGGCGGCTA+CGG | 0.444859 | 2_3:+59327664 | None:intergenic |
| GAGGTTGGTTGCTGACGTTT+TGG | 0.452923 | 2_3:-59327294 | Msa0302530:CDS |
| AGGTGGCAATGCCAAGTTGT+CGG | 0.455271 | 2_3:-59327054 | Msa0302530:CDS |
| AAAGTAGAAGGCAAGTTTCA+GGG | 0.459532 | 2_3:+59324239 | None:intergenic |
| AACATGCCTCTATCTTTACT+AGG | 0.462368 | 2_3:-59325842 | Msa0302530:CDS |
| AAAGTTGAATTAGGATCCTC+TGG | 0.471052 | 2_3:-59327230 | Msa0302530:CDS |
| GTGTTTCTTGTTCATCATCT+CGG | 0.472466 | 2_3:-59326509 | Msa0302530:CDS |
| TTAGGAAGCTCGGCTTTGAA+TGG | 0.472558 | 2_3:+59327551 | None:intergenic |
| GCTTCCAAATTGAGACTGGC+AGG | 0.481659 | 2_3:-59328001 | Msa0302530:five_prime_UTR |
| AAGTTGCAATCACTACAATC+TGG | 0.484938 | 2_3:+59327203 | None:intergenic |
| GTGTTAAGGTTTCTGACCCT+TGG | 0.485722 | 2_3:-59324153 | Msa0302530:three_prime_UTR |
| TGCCTTCTACTTTAATATGA+GGG | 0.487747 | 2_3:-59324229 | Msa0302530:exon |
| CAAGGAAGAAAGTGAAGCAT+AGG | 0.488785 | 2_3:-59324030 | Msa0302530:three_prime_UTR |
| GTACCAATCGGTACTGCGAC+TGG | 0.489310 | 2_3:-59327131 | Msa0302530:CDS |
| TTCTATTTGCTCAGAGAGGT+TGG | 0.489879 | 2_3:-59327309 | Msa0302530:CDS |
| TGTGACTTTGTAGATTGGTT+TGG | 0.490365 | 2_3:-59324180 | Msa0302530:three_prime_UTR |
| TATGATGTGACTTTGTAGAT+TGG | 0.490431 | 2_3:-59324185 | Msa0302530:three_prime_UTR |
| TCAAAGAATAAGGAAAAGAT+TGG | 0.490559 | 2_3:-59326883 | Msa0302530:CDS |
| CTTAGTAGCTCGTTGTTCAA+AGG | 0.497054 | 2_3:-59327014 | Msa0302530:CDS |
| TTCAACCAGTGCTTCAACTT+CGG | 0.497529 | 2_3:+59325229 | None:intergenic |
| GGCTCACCTCTTCTTTGTTG+AGG | 0.499211 | 2_3:+59324352 | None:intergenic |
| ATGCTGTGTTGAGGAACTAA+TGG | 0.499819 | 2_3:-59327105 | Msa0302530:CDS |
| ATCTTTGAAGAAAATTCTGT+GGG | 0.500302 | 2_3:-59329077 | Msa0302530:five_prime_UTR |
| CAACACAGATTTGTTAAGGA+AGG | 0.505360 | 2_3:-59327503 | Msa0302530:CDS |
| GATCAAATCATTTAAAGTGC+CGG | 0.507969 | 2_3:-59326213 | Msa0302530:CDS |
| CCTTCTACTTTAATATGAGG+GGG | 0.515655 | 2_3:-59324227 | Msa0302530:exon |
| CACAACGCCGCCGAATTCGC+AGG | 0.516918 | 2_3:-59325265 | Msa0302530:CDS |
| CCTAATGTATTGATAGAAGA+AGG | 0.520168 | 2_3:+59325395 | None:intergenic |
| ATCGTTATACCCCGACAACT+TGG | 0.520649 | 2_3:+59327043 | None:intergenic |
| CCCAACAATGACACGAATCA+AGG | 0.522512 | 2_3:-59326531 | Msa0302530:CDS |
| CATTACCCTAGTAAAGATAG+AGG | 0.525106 | 2_3:+59325836 | None:intergenic |
| TCAACGACTTATTTGCATCC+GGG | 0.528602 | 2_3:+59327477 | None:intergenic |
| TAAAGTGCCGGCGGCTACGG+TGG | 0.530670 | 2_3:+59327667 | None:intergenic |
| TTTCTCTTGCAATAAAGTGC+CGG | 0.532184 | 2_3:+59327655 | None:intergenic |
| CGAGTTGGTATGATTCTCCA+TGG | 0.533773 | 2_3:-59326019 | Msa0302530:CDS |
| GATCTTTGAAGAAAATTCTG+TGG | 0.534856 | 2_3:-59329078 | Msa0302530:five_prime_UTR |
| ATTTGTTAAGGAAGGTTGCC+CGG | 0.534918 | 2_3:-59327495 | Msa0302530:CDS |
| GCCTTCTACTTTAATATGAG+GGG | 0.535220 | 2_3:-59324228 | Msa0302530:exon |
| AAGGAAGAAAGTGAAGCATA+GGG | 0.535836 | 2_3:-59324029 | Msa0302530:three_prime_UTR |
| AACTATTCCTGAAATGGATA+CGG | 0.538330 | 2_3:-59325339 | Msa0302530:CDS |
| AAATCTGAAAAGGTACCAAT+CGG | 0.539431 | 2_3:-59327143 | Msa0302530:CDS |
| TGTTGATGTAAGTAAAGTAA+AGG | 0.539535 | 2_3:-59327177 | Msa0302530:CDS |
| CCTAAACCTATTGGCGCTTG+AGG | 0.542181 | 2_3:+59327074 | None:intergenic |
| CTGATGACGTAAGTAGTGAC+AGG | 0.544616 | 2_3:-59327442 | Msa0302530:CDS |
| GCAGTGACTACTCTACTTCA+AGG | 0.546517 | 2_3:-59326049 | Msa0302530:CDS |
| GGTTCTTTCCCTGTTTGGAG+AGG | 0.549088 | 2_3:-59323971 | Msa0302530:three_prime_UTR |
| ACTAGCTTCATTAGGAAGCT+CGG | 0.549702 | 2_3:+59327541 | None:intergenic |
| TGTTGCCGAAGTTGAAGCAC+TGG | 0.554421 | 2_3:-59325234 | Msa0302530:CDS |
| ATTCATGCAAAATGTGAGAT+CGG | 0.564599 | 2_3:+59329137 | None:intergenic |
| AATTTCTCATGATAACCAGC+TGG | 0.565236 | 2_3:-59325954 | Msa0302530:CDS |
| ATTTCCATTAGAATTTGAAG+TGG | 0.566306 | 2_3:+59326581 | None:intergenic |
| TCAGGCTTCCAAATTGAGAC+TGG | 0.566330 | 2_3:-59328005 | Msa0302530:intron |
| TCAACATGGATTCGTTAAAG+AGG | 0.566359 | 2_3:-59327591 | Msa0302530:CDS |
| CTTCAAGGTGGATTGCGAGT+TGG | 0.570784 | 2_3:-59326034 | Msa0302530:CDS |
| TCTAATGGAAATATCAGAAG+TGG | 0.571057 | 2_3:-59326570 | Msa0302530:CDS |
| GAGATATGGTGGCGCAGAAG+AGG | 0.575112 | 2_3:-59327919 | Msa0302530:exon |
| CACGATACACTTTCTAACAA+TGG | 0.577025 | 2_3:-59326825 | Msa0302530:intron |
| AGATCCTGGAAAGTCATCCT+TGG | 0.577146 | 2_3:-59326382 | Msa0302530:CDS |
| TGAAGCCCAAAGCATCCAGC+TGG | 0.587306 | 2_3:+59325939 | None:intergenic |
| CAACATGGATTCGTTAAAGA+GGG | 0.588442 | 2_3:-59327590 | Msa0302530:CDS |
| ATATCTCCTCAACAAAGAAG+AGG | 0.590679 | 2_3:-59324358 | Msa0302530:CDS |
| GCAGGATAAATGGAAAACAT+TGG | 0.595370 | 2_3:-59324395 | Msa0302530:intron |
| ACCCTATCCAAAAGTTCTTG+AGG | 0.596914 | 2_3:+59324325 | None:intergenic |
| GCGTGCCACACGATCACCTA+GGG | 0.598126 | 2_3:-59327855 | Msa0302530:intron |
| TTACGATCTAAAGATTCTCA+TGG | 0.598425 | 2_3:-59326339 | Msa0302530:intron |
| TCATCATCTCGGATGCGCAA+AGG | 0.599031 | 2_3:-59326498 | Msa0302530:intron |
| AAAGAACCATAGTGTGAGCA+AGG | 0.599354 | 2_3:+59323986 | None:intergenic |
| ACTTACGTCATCAGAAAGCT+CGG | 0.600372 | 2_3:+59327451 | None:intergenic |
| CTAGGTGATCGTGTGGCACG+CGG | 0.600422 | 2_3:+59327857 | None:intergenic |
| CGGTCAAAATCACTATTCGA+AGG | 0.601638 | 2_3:-59327387 | Msa0302530:CDS |
| GACTGGAGCATGCTGTGTTG+AGG | 0.602494 | 2_3:-59327114 | Msa0302530:CDS |
| TTGCGAAGAATTAGGCTCCA+AGG | 0.603627 | 2_3:+59325916 | None:intergenic |
| AGAAATAGCCTCTCCAAACA+GGG | 0.604751 | 2_3:+59323963 | None:intergenic |
| GCTCCAGTCGCAGTACCGAT+TGG | 0.608866 | 2_3:+59327128 | None:intergenic |
| CTCTTGCAATAAAGTGCCGG+CGG | 0.613646 | 2_3:+59327658 | None:intergenic |
| ATGGAAAACATTGGTACACA+CGG | 0.617941 | 2_3:-59324386 | Msa0302530:CDS |
| ATGAAGCTAGTTGTGACAGA+AGG | 0.618118 | 2_3:-59327529 | Msa0302530:CDS |
| AGAGGCATGTTGTCTGCAGT+AGG | 0.619918 | 2_3:+59325854 | None:intergenic |
| AATCCAATCACACCTGGTGA+CGG | 0.619982 | 2_3:-59327629 | Msa0302530:CDS |
| TATTCCTGAAATGGATACGG+AGG | 0.621261 | 2_3:-59325336 | Msa0302530:CDS |
| GCATGGTTTCTGAGATATGG+TGG | 0.624102 | 2_3:-59327930 | Msa0302530:exon |
| ACATGCCTCTATCTTTACTA+GGG | 0.625348 | 2_3:-59325841 | Msa0302530:intron |
| CAAGTTCTATTTGCTCAGAG+AGG | 0.625767 | 2_3:-59327313 | Msa0302530:CDS |
| TTATTGGCCACCGTAGCCGC+CGG | 0.631400 | 2_3:-59327674 | Msa0302530:CDS |
| AATTGATGGTCACTCATGCA+TGG | 0.632522 | 2_3:-59327348 | Msa0302530:CDS |
| AGAATGACGATATGCTTCCA+AGG | 0.635283 | 2_3:+59326365 | None:intergenic |
| GAATCTTTAGCACATGTGAG+TGG | 0.636250 | 2_3:+59325887 | None:intergenic |
| GGATACATTTCAAAGAAGTG+TGG | 0.637536 | 2_3:-59327723 | Msa0302530:CDS |
| GTGGCAATGCCAAGTTGTCG+GGG | 0.645617 | 2_3:-59327052 | Msa0302530:CDS |
| CAAGCGCCAATAGGTTTAGG+TGG | 0.646070 | 2_3:-59327071 | Msa0302530:CDS |
| CGCGTGCCACACGATCACCT+AGG | 0.652320 | 2_3:-59327856 | Msa0302530:CDS |
| ATTTACCCTAGGTGATCGTG+TGG | 0.652914 | 2_3:+59327850 | None:intergenic |
| TCCACAGAAAGCAGTTATGG+AGG | 0.659363 | 2_3:-59326071 | Msa0302530:intron |
| CTTCCAAATTGAGACTGGCA+GGG | 0.663098 | 2_3:-59328000 | Msa0302530:five_prime_UTR |
| ATTCCTGAAATGGATACGGA+GGG | 0.670098 | 2_3:-59325335 | Msa0302530:CDS |
| AAACAGAATCCAATCACACC+TGG | 0.670956 | 2_3:-59327635 | Msa0302530:CDS |
| ACCAATATGCATGAGCAGTG+AGG | 0.673172 | 2_3:+59324302 | None:intergenic |
| TGGCAGGGTCAAGCAACACG+TGG | 0.689986 | 2_3:-59327985 | Msa0302530:five_prime_UTR |
| AGGAAGAAAGTGAAGCATAG+GGG | 0.691011 | 2_3:-59324028 | Msa0302530:three_prime_UTR |
| ACTACAATCTGGATATCCAG+AGG | 0.693416 | 2_3:+59327214 | None:intergenic |
| GTGACTACTCTACTTCAAGG+TGG | 0.715265 | 2_3:-59326046 | Msa0302530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATAATTTTAAAAAAGAAAA+TGG | + | chr2_3:59324810-59324829 | None:intergenic | 10.0% |
| !! | AATAAATAGATAATAGTAAT+CGG | + | chr2_3:59325289-59325308 | None:intergenic | 10.0% |
| !!! | GAATTTATTTAAAACTTATT+TGG | - | chr2_3:59327953-59327972 | Msa0302530:five_prime_UTR | 10.0% |
| !! | AAAAAAAAATCTATACAAAA+GGG | + | chr2_3:59328238-59328257 | None:intergenic | 10.0% |
| !! | TAAAAAAAAATCTATACAAA+AGG | + | chr2_3:59328239-59328258 | None:intergenic | 10.0% |
| !!! | TTGTATAGATTTTTTTTTAT+TGG | - | chr2_3:59328240-59328259 | Msa0302530:intron | 10.0% |
| !!! | AACTTTTTTTTTATTTGTGA+TGG | - | chr2_3:59323917-59323936 | Msa0302530:three_prime_UTR | 15.0% |
| !!! | TATTTGATCATTTCTTATTT+TGG | - | chr2_3:59325139-59325158 | Msa0302530:intron | 15.0% |
| !!! | TAGAATTTTTCAATTGTATA+TGG | + | chr2_3:59326972-59326991 | None:intergenic | 15.0% |
| !!! | ATCACTTTTTTCTTTTTTTT+GGG | - | chr2_3:59328993-59329012 | Msa0302530:intron | 15.0% |
| !! | ATGTAAAAAATTATAGTACA+AGG | - | chr2_3:59329043-59329062 | Msa0302530:intron | 15.0% |
| !!! | TTTTTTTGTTGAATCTTTGA+TGG | - | chr2_3:59324046-59324065 | Msa0302530:three_prime_UTR | 20.0% |
| !!! | TTTTTTGTTGAATCTTTGAT+GGG | - | chr2_3:59324047-59324066 | Msa0302530:three_prime_UTR | 20.0% |
| !!! | CAAAAAGTTAGCATATTTTA+AGG | + | chr2_3:59324085-59324104 | None:intergenic | 20.0% |
| !! | AGAAAAAAAAAACTGTTGTT+GGG | - | chr2_3:59324125-59324144 | Msa0302530:three_prime_UTR | 20.0% |
| !! | ATACTAAAAAAATAAACCCT+AGG | + | chr2_3:59324732-59324751 | None:intergenic | 20.0% |
| !! | ATGATTACAGATATTATCAA+TGG | - | chr2_3:59324779-59324798 | Msa0302530:intron | 20.0% |
| !! | TTCAAAATTCAAACACATTA+TGG | + | chr2_3:59325043-59325062 | None:intergenic | 20.0% |
| !! | CATTAAAAAAAGTAGTTACA+TGG | + | chr2_3:59325332-59325351 | None:intergenic | 20.0% |
| !!! | TAATATTTTTCATTTCACTG+TGG | + | chr2_3:59325836-59325855 | None:intergenic | 20.0% |
| !! | ATTACTAGTAAAGTTGAATT+AGG | - | chr2_3:59325852-59325871 | Msa0302530:CDS | 20.0% |
| !! | TATACAATTCTTTGATCTAA+AGG | + | chr2_3:59326183-59326202 | None:intergenic | 20.0% |
| !! | TTTAGATCAAAGAATTGTAT+AGG | - | chr2_3:59326182-59326201 | Msa0302530:CDS | 20.0% |
| !!! | GAATATTCATTTGAGATATT+TGG | + | chr2_3:59326457-59326476 | None:intergenic | 20.0% |
| !!! | ATAATTTTATTGTACCTTCA+AGG | + | chr2_3:59326943-59326962 | None:intergenic | 20.0% |
| !! | AAATCAAGAGAATAATATTC+AGG | - | chr2_3:59327559-59327578 | Msa0302530:CDS | 20.0% |
| !! | ACTAACATTTGCATAATATT+TGG | - | chr2_3:59327988-59328007 | Msa0302530:five_prime_UTR | 20.0% |
| !!! | TGATTTTTTTAATGACACAT+TGG | + | chr2_3:59328134-59328153 | None:intergenic | 20.0% |
| !!! | AATGTGTCATTAAAAAAATC+AGG | - | chr2_3:59328133-59328152 | Msa0302530:intron | 20.0% |
| !!! | AATCAACAAAAAAGCATAAA+TGG | + | chr2_3:59328435-59328454 | None:intergenic | 20.0% |
| !! | TAGTATTTCATTGTATCATT+TGG | - | chr2_3:59328615-59328634 | Msa0302530:intron | 20.0% |
| !! | TGTCCTTATAATAGAAAAAA+TGG | - | chr2_3:59328641-59328660 | Msa0302530:intron | 20.0% |
| !!! | CAACCATTTTTTCTATTATA+AGG | + | chr2_3:59328647-59328666 | None:intergenic | 20.0% |
| !! | CTTATAATAGAAAAAATGGT+TGG | - | chr2_3:59328645-59328664 | Msa0302530:intron | 20.0% |
| !!! | CATCACTTTTTTCTTTTTTT+TGG | - | chr2_3:59328992-59329011 | Msa0302530:intron | 20.0% |
| !! | AAATGGTTTATATGCAATAA+AGG | - | chr2_3:59329158-59329177 | Msa0302530:five_prime_UTR | 20.0% |
| !! | AATGGTTTATATGCAATAAA+GGG | - | chr2_3:59329159-59329178 | Msa0302530:five_prime_UTR | 20.0% |
| ! | CATCAAATGAATCGAAATTA+CGG | + | chr2_3:59323983-59324002 | None:intergenic | 25.0% |
| !! | ATCTTTGAAGAAAATTCTGT+GGG | - | chr2_3:59324014-59324033 | Msa0302530:three_prime_UTR | 25.0% |
| ! | GAGAAAAAAAAAACTGTTGT+TGG | - | chr2_3:59324124-59324143 | Msa0302530:three_prime_UTR | 25.0% |
| !!! | TTTTGTTTTGTGTTGTTGTT+TGG | - | chr2_3:59324419-59324438 | Msa0302530:intron | 25.0% |
| ! | TATACCAATTATTACTCCTA+GGG | - | chr2_3:59324713-59324732 | Msa0302530:intron | 25.0% |
| !! | CAGTAATTGTTGTTGAATTT+AGG | - | chr2_3:59324846-59324865 | Msa0302530:intron | 25.0% |
| !! | TTAATGATTTTTCGTAGAAG+AGG | - | chr2_3:59325346-59325365 | Msa0302530:CDS | 25.0% |
| !! | TAATGATTTTTCGTAGAAGA+GGG | - | chr2_3:59325347-59325366 | Msa0302530:CDS | 25.0% |
| ! | TGTTGATGTAAGTAAAGTAA+AGG | - | chr2_3:59325914-59325933 | Msa0302530:CDS | 25.0% |
| ! | TCAAAGAATAAGGAAAAGAT+TGG | - | chr2_3:59326208-59326227 | Msa0302530:CDS | 25.0% |
| !!! | AAAGATTGGCTTCTAAATAT+CGG | - | chr2_3:59326222-59326241 | Msa0302530:CDS | 25.0% |
| !! | TATTTGAAACATGTTAGTTG+TGG | - | chr2_3:59326382-59326401 | Msa0302530:CDS | 25.0% |
| ! | TGAATATTCCTTTCAAAAAG+AGG | - | chr2_3:59326468-59326487 | Msa0302530:intron | 25.0% |
| !! | AAAATCTTCCTCTTTTTGAA+AGG | + | chr2_3:59326479-59326498 | None:intergenic | 25.0% |
| ! | ATTTCCATTAGAATTTGAAG+TGG | + | chr2_3:59326513-59326532 | None:intergenic | 25.0% |
| ! | TAATGAAATGTTCCTATTCA+AGG | - | chr2_3:59326629-59326648 | Msa0302530:CDS | 25.0% |
| !!! | ATATTCTAGTTCAAGTAGTT+GGG | + | chr2_3:59327310-59327329 | None:intergenic | 25.0% |
| !!! | CAGCATATTCTTTTTTTAGT+AGG | + | chr2_3:59327423-59327442 | None:intergenic | 25.0% |
| ! | TTAGGTGAAAAAAGATTGAT+AGG | - | chr2_3:59327714-59327733 | Msa0302530:CDS | 25.0% |
| !! | TAGAACAACTAATTTGCATT+TGG | + | chr2_3:59328367-59328386 | None:intergenic | 25.0% |
| ! | AACTAGCTAGATAGAATATT+AGG | + | chr2_3:59328459-59328478 | None:intergenic | 25.0% |
| ! | AATACAGTATAAGATACTGA+TGG | - | chr2_3:59328559-59328578 | Msa0302530:intron | 25.0% |
| !!! | TATTAGGTATTTGATAATGC+AGG | - | chr2_3:59328678-59328697 | Msa0302530:intron | 25.0% |
| !!! | ATTTGATAATGCAGGATAAA+TGG | - | chr2_3:59328686-59328705 | Msa0302530:intron | 25.0% |
| ! | ACAAAAGAAAAAGTTACCAA+GGG | + | chr2_3:59328957-59328976 | None:intergenic | 25.0% |
| ! | TACAAAAGAAAAAGTTACCA+AGG | + | chr2_3:59328958-59328977 | None:intergenic | 25.0% |
| ATTCATGCAAAATGTGAGAT+CGG | + | chr2_3:59323957-59323976 | None:intergenic | 30.0% | |
| ! | GATCTTTGAAGAAAATTCTG+TGG | - | chr2_3:59324013-59324032 | Msa0302530:three_prime_UTR | 30.0% |
| !! | AGTTGAAATTTTGACGTGTT+TGG | - | chr2_3:59324194-59324213 | Msa0302530:three_prime_UTR | 30.0% |
| TCTTAAACCTCAGAGAAAAA+CGG | + | chr2_3:59324469-59324488 | None:intergenic | 30.0% | |
| !!! | TTTTCTCTGAGGTTTAAGAT+CGG | - | chr2_3:59324470-59324489 | Msa0302530:intron | 30.0% |
| AAGAGGATTAAACAAGACAA+AGG | + | chr2_3:59324504-59324523 | None:intergenic | 30.0% | |
| GTATACCAATTATTACTCCT+AGG | - | chr2_3:59324712-59324731 | Msa0302530:intron | 30.0% | |
| TAAACCCTAGGAGTAATAAT+TGG | + | chr2_3:59324720-59324739 | None:intergenic | 30.0% | |
| CTGTAATCATTTCGTCAAAT+GGG | + | chr2_3:59324769-59324788 | None:intergenic | 30.0% | |
| TCTGTAATCATTTCGTCAAA+TGG | + | chr2_3:59324770-59324789 | None:intergenic | 30.0% | |
| TTCAACAACAATTACTGTGA+AGG | + | chr2_3:59324843-59324862 | None:intergenic | 30.0% | |
| ! | TCTGATTTTCTCGCAATTTT+TGG | - | chr2_3:59324887-59324906 | Msa0302530:intron | 30.0% |
| ! | CTGATTTTCTCGCAATTTTT+GGG | - | chr2_3:59324888-59324907 | Msa0302530:intron | 30.0% |
| !!! | GATCATTTCTTATTTTGGCA+TGG | - | chr2_3:59325144-59325163 | Msa0302530:intron | 30.0% |
| AGGATAGATTATGGATTTGT+TGG | - | chr2_3:59325192-59325211 | Msa0302530:intron | 30.0% | |
| TCATCGAAAAAAGATCAACA+TGG | - | chr2_3:59325486-59325505 | Msa0302530:intron | 30.0% | |
| AATTCGCATCTTGAAATTGA+TGG | - | chr2_3:59325729-59325748 | Msa0302530:intron | 30.0% | |
| TGAGCTACAAAAATCTGAAA+AGG | - | chr2_3:59325938-59325957 | Msa0302530:CDS | 30.0% | |
| !! | AAATCTGAAAAGGTACCAAT+CGG | - | chr2_3:59325948-59325967 | Msa0302530:CDS | 30.0% |
| !! | ATGATGACGAAAACTTTTCA+GGG | - | chr2_3:59326129-59326148 | Msa0302530:intron | 30.0% |
| !!! | AGGACTTTGTTTTCAAACTA+GGG | + | chr2_3:59326163-59326182 | None:intergenic | 30.0% |
| !!! | AAGGACTTTGTTTTCAAACT+AGG | + | chr2_3:59326164-59326183 | None:intergenic | 30.0% |
| GTATAGGTGATCAAAGAATA+AGG | - | chr2_3:59326198-59326217 | Msa0302530:CDS | 30.0% | |
| AACTCCACTTCAAATTCTAA+TGG | - | chr2_3:59326506-59326525 | Msa0302530:CDS | 30.0% | |
| TCTAATGGAAATATCAGAAG+TGG | - | chr2_3:59326521-59326540 | Msa0302530:CDS | 30.0% | |
| TTACGATCTAAAGATTCTCA+TGG | - | chr2_3:59326752-59326771 | Msa0302530:intron | 30.0% | |
| CTTGATTGATATCTTCAAAG+AGG | - | chr2_3:59326813-59326832 | Msa0302530:intron | 30.0% | |
| !!! | TGTTTTAATCAGTGAAGCTT+AGG | - | chr2_3:59326856-59326875 | Msa0302530:CDS | 30.0% |
| ! | GATCAAATCATTTAAAGTGC+CGG | - | chr2_3:59326878-59326897 | Msa0302530:CDS | 30.0% |
| AGTAAAACTCTACTTCAAAC+TGG | - | chr2_3:59327114-59327133 | Msa0302530:CDS | 30.0% | |
| AATGCAATCAATTGCAAGTT+AGG | + | chr2_3:59327281-59327300 | None:intergenic | 30.0% | |
| !! | CATATTCTAGTTCAAGTAGT+TGG | + | chr2_3:59327311-59327330 | None:intergenic | 30.0% |
| TTTAATGACAACATCTCCAA+GGG | + | chr2_3:59327475-59327494 | None:intergenic | 30.0% | |
| ! | TTTTAATGACAACATCTCCA+AGG | + | chr2_3:59327476-59327495 | None:intergenic | 30.0% |
| ! | CCTAATGTATTGATAGAAGA+AGG | + | chr2_3:59327699-59327718 | None:intergenic | 30.0% |
| CCTTCTTCTATCAATACATT+AGG | - | chr2_3:59327696-59327715 | Msa0302530:CDS | 30.0% | |
| AGGAATAGTTACAAGTTCTT+TGG | + | chr2_3:59327742-59327761 | None:intergenic | 30.0% | |
| ACTTGTAACTATTCCTGAAA+TGG | - | chr2_3:59327746-59327765 | Msa0302530:intron | 30.0% | |
| AACTATTCCTGAAATGGATA+CGG | - | chr2_3:59327752-59327771 | Msa0302530:intron | 30.0% | |
| ! | GTGTCATTAAAAAAATCAGG+TGG | - | chr2_3:59328136-59328155 | Msa0302530:intron | 30.0% |
| ! | TGTCACACTTTAAGTCATTT+TGG | - | chr2_3:59328304-59328323 | Msa0302530:intron | 30.0% |
| GTTCTATCAAGTCAAGTAAT+TGG | - | chr2_3:59328381-59328400 | Msa0302530:intron | 30.0% | |
| CAAGTAATTGGTTGTGTATT+AGG | - | chr2_3:59328393-59328412 | Msa0302530:intron | 30.0% | |
| TTGCCTTCTACTTTAATATG+AGG | - | chr2_3:59328861-59328880 | Msa0302530:intron | 30.0% | |
| TGCCTTCTACTTTAATATGA+GGG | - | chr2_3:59328862-59328881 | Msa0302530:intron | 30.0% | |
| ATCTACAAAGTCACATCATA+TGG | + | chr2_3:59328906-59328925 | None:intergenic | 30.0% | |
| TATGATGTGACTTTGTAGAT+TGG | - | chr2_3:59328906-59328925 | Msa0302530:intron | 30.0% | |
| !! | GGCTATTTCTTGTAAGTAAA+TGG | - | chr2_3:59329141-59329160 | Msa0302530:five_prime_UTR | 30.0% |
| ATGTGAGATCGGAGTATATT+CGG | + | chr2_3:59323946-59323965 | None:intergenic | 35.0% | |
| GAAGAAAATTCTGTGGGAAA+AGG | - | chr2_3:59324020-59324039 | Msa0302530:three_prime_UTR | 35.0% | |
| ACTGTTGTTGGGTTTATCTT+TGG | - | chr2_3:59324136-59324155 | Msa0302530:three_prime_UTR | 35.0% | |
| CTGTTGTTGGGTTTATCTTT+GGG | - | chr2_3:59324137-59324156 | Msa0302530:three_prime_UTR | 35.0% | |
| TGTTGTTGGGTTTATCTTTG+GGG | - | chr2_3:59324138-59324157 | Msa0302530:three_prime_UTR | 35.0% | |
| !!! | TGACGTGTTTGGTTTTGTTT+TGG | - | chr2_3:59324205-59324224 | Msa0302530:three_prime_UTR | 35.0% |
| !! | TTTGGAAGTGTTTGTTTGTG+TGG | - | chr2_3:59324223-59324242 | Msa0302530:exon | 35.0% |
| AAGTGTTTGTTTGTGTGGTT+GGG | - | chr2_3:59324228-59324247 | Msa0302530:exon | 35.0% | |
| ! | ACACGTGAGTTTTCAGTTTT+CGG | - | chr2_3:59324251-59324270 | Msa0302530:CDS | 35.0% |
| ! | TCTCTGTTTATGCACTCTTT+TGG | - | chr2_3:59324317-59324336 | Msa0302530:CDS | 35.0% |
| ! | ATTTCCATGTTGCTTGTGAT+AGG | - | chr2_3:59324395-59324414 | Msa0302530:intron | 35.0% |
| ! | TTTCCATGTTGCTTGTGATA+GGG | - | chr2_3:59324396-59324415 | Msa0302530:intron | 35.0% |
| !! | TGTGTTGTTGTTTGGTGAAT+TGG | - | chr2_3:59324427-59324446 | Msa0302530:intron | 35.0% |
| !! | TGTTTCTGGATTCTGTAATC+TGG | - | chr2_3:59324533-59324552 | Msa0302530:intron | 35.0% |
| !!! | TCTGTAATCTGGTCTTGTTT+TGG | - | chr2_3:59324544-59324563 | Msa0302530:intron | 35.0% |
| TTGAAGAAGAACACGAGAAA+GGG | + | chr2_3:59324573-59324592 | None:intergenic | 35.0% | |
| AGATTCAAATGAAGACGCAA+TGG | + | chr2_3:59324683-59324702 | None:intergenic | 35.0% | |
| !! | TTATGGATTTGTTGGCTATC+AGG | - | chr2_3:59325200-59325219 | Msa0302530:intron | 35.0% |
| AAGCAGAATTCATTTACCCT+AGG | + | chr2_3:59325255-59325274 | None:intergenic | 35.0% | |
| AATGAATTCTGCTTCGCTTA+TGG | - | chr2_3:59325261-59325280 | Msa0302530:CDS | 35.0% | |
| GGATACATTTCAAAGAAGTG+TGG | - | chr2_3:59325368-59325387 | Msa0302530:CDS | 35.0% | |
| ! | AATGTGTGCGATTGACTTAT+TGG | - | chr2_3:59325401-59325420 | Msa0302530:CDS | 35.0% |
| TTTCTCTTGCAATAAAGTGC+CGG | + | chr2_3:59325439-59325458 | None:intergenic | 35.0% | |
| TCAACATGGATTCGTTAAAG+AGG | - | chr2_3:59325500-59325519 | Msa0302530:intron | 35.0% | |
| CAACATGGATTCGTTAAAGA+GGG | - | chr2_3:59325501-59325520 | Msa0302530:intron | 35.0% | |
| !! | TGAATGGTTTGTTTGCATCT+AGG | + | chr2_3:59325527-59325546 | None:intergenic | 35.0% |
| !! | GCTTCAACACAGATTTGTTA+AGG | - | chr2_3:59325584-59325603 | Msa0302530:intron | 35.0% |
| !! | CAACACAGATTTGTTAAGGA+AGG | - | chr2_3:59325588-59325607 | Msa0302530:intron | 35.0% |
| TTCAACGACTTATTTGCATC+CGG | + | chr2_3:59325618-59325637 | None:intergenic | 35.0% | |
| AAAGTTGAATTAGGATCCTC+TGG | - | chr2_3:59325861-59325880 | Msa0302530:CDS | 35.0% | |
| AAGTTGCAATCACTACAATC+TGG | + | chr2_3:59325891-59325910 | None:intergenic | 35.0% | |
| !! | GATGATGACGAAAACTTTTC+AGG | - | chr2_3:59326128-59326147 | Msa0302530:intron | 35.0% |
| CACGATACACTTTCTAACAA+TGG | - | chr2_3:59326266-59326285 | Msa0302530:intron | 35.0% | |
| AAGTGACAAAACAAGAAAGC+AGG | + | chr2_3:59326323-59326342 | None:intergenic | 35.0% | |
| GTGTTTCTTGTTCATCATCT+CGG | - | chr2_3:59326582-59326601 | Msa0302530:CDS | 35.0% | |
| TTAAGTACAGTGCCTTGAAT+AGG | + | chr2_3:59326644-59326663 | None:intergenic | 35.0% | |
| GGAATCTCAATAAAAAGCTC+CGG | + | chr2_3:59326900-59326919 | None:intergenic | 35.0% | |
| ! | CTGCAGCTCTTACAAAATTT+TGG | - | chr2_3:59326997-59327016 | Msa0302530:CDS | 35.0% |
| CATCTCTAAGTTTCTTTCCA+TGG | + | chr2_3:59327092-59327111 | None:intergenic | 35.0% | |
| AATTTCTCATGATAACCAGC+TGG | - | chr2_3:59327137-59327156 | Msa0302530:CDS | 35.0% | |
| AACATGCCTCTATCTTTACT+AGG | - | chr2_3:59327249-59327268 | Msa0302530:CDS | 35.0% | |
| ACATGCCTCTATCTTTACTA+GGG | - | chr2_3:59327250-59327269 | Msa0302530:CDS | 35.0% | |
| CATTACCCTAGTAAAGATAG+AGG | + | chr2_3:59327258-59327277 | None:intergenic | 35.0% | |
| TCAGAGAAACCATGAATCAT+CGG | + | chr2_3:59327618-59327637 | None:intergenic | 35.0% | |
| !!! | CTTTTGATGATGCAAAGCAT+AGG | - | chr2_3:59328178-59328197 | Msa0302530:intron | 35.0% |
| TAGGACATATGTGGATTTGA+AGG | - | chr2_3:59328197-59328216 | Msa0302530:intron | 35.0% | |
| !! | CACACTTTAAGTCATTTTGG+TGG | - | chr2_3:59328307-59328326 | Msa0302530:intron | 35.0% |
| GGTTGGCATGTGATAATATT+AGG | - | chr2_3:59328662-59328681 | Msa0302530:intron | 35.0% | |
| GCAGGATAAATGGAAAACAT+TGG | - | chr2_3:59328696-59328715 | Msa0302530:intron | 35.0% | |
| ATGGAAAACATTGGTACACA+CGG | - | chr2_3:59328705-59328724 | Msa0302530:intron | 35.0% | |
| ATATCTCCTCAACAAAGAAG+AGG | - | chr2_3:59328733-59328752 | Msa0302530:intron | 35.0% | |
| ! | TTCCTCAAGAACTTTTGGAT+AGG | - | chr2_3:59328764-59328783 | Msa0302530:intron | 35.0% |
| ! | TCCTCAAGAACTTTTGGATA+GGG | - | chr2_3:59328765-59328784 | Msa0302530:intron | 35.0% |
| !! | TTGCTTTGTTTGTTGCTGTT+GGG | + | chr2_3:59328815-59328834 | None:intergenic | 35.0% |
| AAAGTAGAAGGCAAGTTTCA+GGG | + | chr2_3:59328855-59328874 | None:intergenic | 35.0% | |
| TAAAGTAGAAGGCAAGTTTC+AGG | + | chr2_3:59328856-59328875 | None:intergenic | 35.0% | |
| GCCTTCTACTTTAATATGAG+GGG | - | chr2_3:59328863-59328882 | Msa0302530:intron | 35.0% | |
| CCTTCTACTTTAATATGAGG+GGG | - | chr2_3:59328864-59328883 | Msa0302530:intron | 35.0% | |
| ! | TGTGACTTTGTAGATTGGTT+TGG | - | chr2_3:59328911-59328930 | Msa0302530:intron | 35.0% |
| !! | CTTTGTAGATTGGTTTGGTT+AGG | - | chr2_3:59328916-59328935 | Msa0302530:intron | 35.0% |
| !! | ATTGGTTTGGTTAGGTGTTA+AGG | - | chr2_3:59328924-59328943 | Msa0302530:intron | 35.0% |
| AAGGAAGAAAGTGAAGCATA+GGG | - | chr2_3:59329062-59329081 | Msa0302530:intron | 35.0% | |
| ! | GAAGTGTTTGTTTGTGTGGT+TGG | - | chr2_3:59324227-59324246 | Msa0302530:exon | 40.0% |
| AAACCCTATCACAAGCAACA+TGG | + | chr2_3:59324402-59324421 | None:intergenic | 40.0% | |
| CAGAAACATTCACGAGAAAG+AGG | + | chr2_3:59324521-59324540 | None:intergenic | 40.0% | |
| CTCTTTCTCGTGAATGTTTC+TGG | - | chr2_3:59324519-59324538 | Msa0302530:intron | 40.0% | |
| CTTGAAGAAGAACACGAGAA+AGG | + | chr2_3:59324574-59324593 | None:intergenic | 40.0% | |
| AGGAAATATCTTACATGGGG+AGG | + | chr2_3:59324918-59324937 | None:intergenic | 40.0% | |
| GCGAGGAAATATCTTACATG+GGG | + | chr2_3:59324921-59324940 | None:intergenic | 40.0% | |
| GGCGAGGAAATATCTTACAT+GGG | + | chr2_3:59324922-59324941 | None:intergenic | 40.0% | |
| !! | GGAGGGAAACAATGGATTAA+TGG | - | chr2_3:59324956-59324975 | Msa0302530:intron | 40.0% |
| GCGTTTGTGTGTTTAATGTC+AGG | - | chr2_3:59325068-59325087 | Msa0302530:intron | 40.0% | |
| !! | TTGGCATGGTTTCTGAGATA+TGG | - | chr2_3:59325158-59325177 | Msa0302530:intron | 40.0% |
| AAACAGAATCCAATCACACC+TGG | - | chr2_3:59325456-59325475 | Msa0302530:intron | 40.0% | |
| ! | ACTAGCTTCATTAGGAAGCT+CGG | + | chr2_3:59325553-59325572 | None:intergenic | 40.0% |
| ! | CTGTCACAACTAGCTTCATT+AGG | + | chr2_3:59325561-59325580 | None:intergenic | 40.0% |
| ATGAAGCTAGTTGTGACAGA+AGG | - | chr2_3:59325562-59325581 | Msa0302530:intron | 40.0% | |
| ! | ATTTGTTAAGGAAGGTTGCC+CGG | - | chr2_3:59325596-59325615 | Msa0302530:intron | 40.0% |
| TCAACGACTTATTTGCATCC+GGG | + | chr2_3:59325617-59325636 | None:intergenic | 40.0% | |
| ACTTACGTCATCAGAAAGCT+CGG | + | chr2_3:59325643-59325662 | None:intergenic | 40.0% | |
| !!! | TTTCTCTGCTTTTTCTTCGC+AGG | - | chr2_3:59325677-59325696 | Msa0302530:intron | 40.0% |
| CGGTCAAAATCACTATTCGA+AGG | - | chr2_3:59325704-59325723 | Msa0302530:intron | 40.0% | |
| ! | AATTGATGGTCACTCATGCA+TGG | - | chr2_3:59325743-59325762 | Msa0302530:intron | 40.0% |
| CAAGTTCTATTTGCTCAGAG+AGG | - | chr2_3:59325778-59325797 | Msa0302530:intron | 40.0% | |
| TTCTATTTGCTCAGAGAGGT+TGG | - | chr2_3:59325782-59325801 | Msa0302530:intron | 40.0% | |
| ACTACAATCTGGATATCCAG+AGG | + | chr2_3:59325880-59325899 | None:intergenic | 40.0% | |
| ATGCTGTGTTGAGGAACTAA+TGG | - | chr2_3:59325986-59326005 | Msa0302530:CDS | 40.0% | |
| CTTAGTAGCTCGTTGTTCAA+AGG | - | chr2_3:59326077-59326096 | Msa0302530:intron | 40.0% | |
| CGAACAAGCAAAAAGAAGCA+CGG | + | chr2_3:59326347-59326366 | None:intergenic | 40.0% | |
| ! | CCTTGATTCGTGTCATTGTT+GGG | + | chr2_3:59326563-59326582 | None:intergenic | 40.0% |
| ! | ACCTTGATTCGTGTCATTGT+TGG | + | chr2_3:59326564-59326583 | None:intergenic | 40.0% |
| CAGGATCTGCAACAAAGATT+TGG | + | chr2_3:59326697-59326716 | None:intergenic | 40.0% | |
| CAAATCTTTGTTGCAGATCC+TGG | - | chr2_3:59326695-59326714 | Msa0302530:CDS | 40.0% | |
| AGAATGACGATATGCTTCCA+AGG | + | chr2_3:59326729-59326748 | None:intergenic | 40.0% | |
| TCATGGTATGCGAAGATTGA+GGG | - | chr2_3:59326769-59326788 | Msa0302530:intron | 40.0% | |
| GGTAAGCTTTGCGAAGAATT+AGG | + | chr2_3:59327186-59327205 | None:intergenic | 40.0% | |
| GAATCTTTAGCACATGTGAG+TGG | + | chr2_3:59327207-59327226 | None:intergenic | 40.0% | |
| ATATGCTGTGTCAGTACCAT+CGG | - | chr2_3:59327326-59327345 | Msa0302530:CDS | 40.0% | |
| ! | ATGCTGTATCAGTGTTTCTG+TGG | - | chr2_3:59327437-59327456 | Msa0302530:CDS | 40.0% |
| GTGGATATCTCAATTTCCCT+TGG | - | chr2_3:59327456-59327475 | Msa0302530:CDS | 40.0% | |
| AAACCATGAATCATCGGAGT+CGG | + | chr2_3:59327612-59327631 | None:intergenic | 40.0% | |
| TTCAACAATGTTGCCTAACC+TGG | + | chr2_3:59327658-59327677 | None:intergenic | 40.0% | |
| TATTCCTGAAATGGATACGG+AGG | - | chr2_3:59327755-59327774 | Msa0302530:intron | 40.0% | |
| ATTCCTGAAATGGATACGGA+GGG | - | chr2_3:59327756-59327775 | Msa0302530:intron | 40.0% | |
| TCAACTTCGGCAACAGAAAA+AGG | + | chr2_3:59327852-59327871 | None:intergenic | 40.0% | |
| TTCAACCAGTGCTTCAACTT+CGG | + | chr2_3:59327865-59327884 | None:intergenic | 40.0% | |
| AATTAGTAGAGCCATGCACA+CGG | + | chr2_3:59328109-59328128 | None:intergenic | 40.0% | |
| TGCAAAGCATAGGACATATG+TGG | - | chr2_3:59328188-59328207 | Msa0302530:intron | 40.0% | |
| TCCAAAAGTTCTTGAGGAAC+AGG | + | chr2_3:59328763-59328782 | None:intergenic | 40.0% | |
| ACCCTATCCAAAAGTTCTTG+AGG | + | chr2_3:59328769-59328788 | None:intergenic | 40.0% | |
| !! | GTTGCTTTGTTTGTTGCTGT+TGG | + | chr2_3:59328816-59328835 | None:intergenic | 40.0% |
| CCCCCTCATATTAAAGTAGA+AGG | + | chr2_3:59328867-59328886 | None:intergenic | 40.0% | |
| CAAGGAAGAAAGTGAAGCAT+AGG | - | chr2_3:59329061-59329080 | Msa0302530:intron | 40.0% | |
| AGGAAGAAAGTGAAGCATAG+GGG | - | chr2_3:59329063-59329082 | Msa0302530:intron | 40.0% | |
| CATTATCCTTGCTCACACTA+TGG | - | chr2_3:59329099-59329118 | Msa0302530:five_prime_UTR | 40.0% | |
| AAAGAACCATAGTGTGAGCA+AGG | + | chr2_3:59329108-59329127 | None:intergenic | 40.0% | |
| ACTATGGTTCTTTCCCTGTT+TGG | - | chr2_3:59329115-59329134 | Msa0302530:five_prime_UTR | 40.0% | |
| AGAAATAGCCTCTCCAAACA+GGG | + | chr2_3:59329131-59329150 | None:intergenic | 40.0% | |
| AAGAAATAGCCTCTCCAAAC+AGG | + | chr2_3:59329132-59329151 | None:intergenic | 40.0% | |
| !! | GTGAGATCCGTTTTTCTCTG+AGG | - | chr2_3:59324459-59324478 | Msa0302530:intron | 45.0% |
| GGGCGAGGAAATATCTTACA+TGG | + | chr2_3:59324923-59324942 | None:intergenic | 45.0% | |
| TCAGGCTTCCAAATTGAGAC+TGG | - | chr2_3:59325086-59325105 | Msa0302530:intron | 45.0% | |
| CTTCCAAATTGAGACTGGCA+GGG | - | chr2_3:59325091-59325110 | Msa0302530:intron | 45.0% | |
| !! | GCATGGTTTCTGAGATATGG+TGG | - | chr2_3:59325161-59325180 | Msa0302530:intron | 45.0% |
| GCGCAGAAGAGGATAGATTA+TGG | - | chr2_3:59325183-59325202 | Msa0302530:intron | 45.0% | |
| ATTTACCCTAGGTGATCGTG+TGG | + | chr2_3:59325244-59325263 | None:intergenic | 45.0% | |
| AATCCAATCACACCTGGTGA+CGG | - | chr2_3:59325462-59325481 | Msa0302530:intron | 45.0% | |
| !! | TTTTTCGATGATCCGTCACC+AGG | + | chr2_3:59325477-59325496 | None:intergenic | 45.0% |
| !! | TTAGGAAGCTCGGCTTTGAA+TGG | + | chr2_3:59325543-59325562 | None:intergenic | 45.0% |
| ! | CTGATGACGTAAGTAGTGAC+AGG | - | chr2_3:59325649-59325668 | Msa0302530:intron | 45.0% |
| !! | GCTTTTTCTTCGCAGGTGTA+CGG | - | chr2_3:59325684-59325703 | Msa0302530:intron | 45.0% |
| GAAAAACCTCAAGCGCCAAT+AGG | - | chr2_3:59326011-59326030 | Msa0302530:CDS | 45.0% | |
| GCATTGCCACCTAAACCTAT+TGG | + | chr2_3:59326029-59326048 | None:intergenic | 45.0% | |
| ATCGTTATACCCCGACAACT+TGG | + | chr2_3:59326051-59326070 | None:intergenic | 45.0% | |
| CCCAACAATGACACGAATCA+AGG | - | chr2_3:59326560-59326579 | Msa0302530:CDS | 45.0% | |
| AGATCCTGGAAAGTCATCCT+TGG | - | chr2_3:59326709-59326728 | Msa0302530:intron | 45.0% | |
| CTCATGGTATGCGAAGATTG+AGG | - | chr2_3:59326768-59326787 | Msa0302530:intron | 45.0% | |
| GAAGCAACAGTTGCAGTTTC+AGG | + | chr2_3:59326921-59326940 | None:intergenic | 45.0% | |
| ! | TGCAACTGTTGCTTCCTTGA+AGG | - | chr2_3:59326926-59326945 | Msa0302530:CDS | 45.0% |
| TGGTCCACAGAAAGCAGTTA+TGG | - | chr2_3:59327017-59327036 | Msa0302530:CDS | 45.0% | |
| TCCACAGAAAGCAGTTATGG+AGG | - | chr2_3:59327020-59327039 | Msa0302530:CDS | 45.0% | |
| GCAGTGACTACTCTACTTCA+AGG | - | chr2_3:59327042-59327061 | Msa0302530:CDS | 45.0% | |
| GTGACTACTCTACTTCAAGG+TGG | - | chr2_3:59327045-59327064 | Msa0302530:CDS | 45.0% | |
| !! | CGAGTTGGTATGATTCTCCA+TGG | - | chr2_3:59327072-59327091 | Msa0302530:CDS | 45.0% |
| TGATAACCAGCTGGATGCTT+TGG | - | chr2_3:59327146-59327165 | Msa0302530:CDS | 45.0% | |
| GATAACCAGCTGGATGCTTT+GGG | - | chr2_3:59327147-59327166 | Msa0302530:CDS | 45.0% | |
| TTGCGAAGAATTAGGCTCCA+AGG | + | chr2_3:59327178-59327197 | None:intergenic | 45.0% | |
| TATGCTGTGTCAGTACCATC+GGG | - | chr2_3:59327327-59327346 | Msa0302530:CDS | 45.0% | |
| TTGACAACACACACACACTG+CGG | + | chr2_3:59327378-59327397 | None:intergenic | 45.0% | |
| TGTGTGTGTTGTCAACCCTA+AGG | - | chr2_3:59327383-59327402 | Msa0302530:CDS | 45.0% | |
| TGTTGTCAACCCTAAGGTAC+TGG | - | chr2_3:59327389-59327408 | Msa0302530:CDS | 45.0% | |
| GAGCATCAAGTAACCAGGTT+AGG | - | chr2_3:59327642-59327661 | Msa0302530:CDS | 45.0% | |
| TGTGAGATCTCAGTTCGCTT+TGG | + | chr2_3:59327810-59327829 | None:intergenic | 45.0% | |
| CAGAAAAAGGCCTGCGAATT+CGG | + | chr2_3:59327839-59327858 | None:intergenic | 45.0% | |
| ACGGTCGATTAAGGACTCAT+TGG | + | chr2_3:59328090-59328109 | None:intergenic | 45.0% | |
| ! | GCCTGTTCCTCAAGAACTTT+TGG | - | chr2_3:59328759-59328778 | Msa0302530:intron | 45.0% |
| TCCTCACTGCTCATGCATAT+TGG | - | chr2_3:59328788-59328807 | Msa0302530:intron | 45.0% | |
| ACCAATATGCATGAGCAGTG+AGG | + | chr2_3:59328792-59328811 | None:intergenic | 45.0% | |
| GTGTTAAGGTTTCTGACCCT+TGG | - | chr2_3:59328938-59328957 | Msa0302530:intron | 45.0% | |
| TATTTCCTCGCCCTCAAGCA+TGG | - | chr2_3:59324930-59324949 | Msa0302530:intron | 50.0% | |
| GCTTCCAAATTGAGACTGGC+AGG | - | chr2_3:59325090-59325109 | Msa0302530:intron | 50.0% | |
| TGACCCTGCCAGTCTCAATT+TGG | + | chr2_3:59325097-59325116 | None:intergenic | 50.0% | |
| !! | CTCTTGCAATAAAGTGCCGG+CGG | + | chr2_3:59325436-59325455 | None:intergenic | 50.0% |
| !! | GAGGTTGGTTGCTGACGTTT+TGG | - | chr2_3:59325797-59325816 | Msa0302530:intron | 50.0% |
| ! | GTTGGTTGCTGACGTTTTGG+TGG | - | chr2_3:59325800-59325819 | Msa0302530:intron | 50.0% |
| CCTAAACCTATTGGCGCTTG+AGG | + | chr2_3:59326020-59326039 | None:intergenic | 50.0% | |
| CCTCAAGCGCCAATAGGTTT+AGG | - | chr2_3:59326017-59326036 | Msa0302530:CDS | 50.0% | |
| CAAGCGCCAATAGGTTTAGG+TGG | - | chr2_3:59326020-59326039 | Msa0302530:CDS | 50.0% | |
| AGGTGGCAATGCCAAGTTGT+CGG | - | chr2_3:59326037-59326056 | Msa0302530:CDS | 50.0% | |
| TCATCATCTCGGATGCGCAA+AGG | - | chr2_3:59326593-59326612 | Msa0302530:CDS | 50.0% | |
| GCTTCCAAGGATGACTTTCC+AGG | + | chr2_3:59326716-59326735 | None:intergenic | 50.0% | |
| GCCTCCATAACTGCTTTCTG+TGG | + | chr2_3:59327024-59327043 | None:intergenic | 50.0% | |
| !! | CTTCAAGGTGGATTGCGAGT+TGG | - | chr2_3:59327057-59327076 | Msa0302530:CDS | 50.0% |
| ! | AGAGGCATGTTGTCTGCAGT+AGG | + | chr2_3:59327240-59327259 | None:intergenic | 50.0% |
| GGAGTCGGATGAAGTACAGA+TGG | + | chr2_3:59327597-59327616 | None:intergenic | 50.0% | |
| CATCCGACTCCGATGATTCA+TGG | - | chr2_3:59327606-59327625 | Msa0302530:CDS | 50.0% | |
| ACGCTGAGCATCAAGTAACC+AGG | - | chr2_3:59327637-59327656 | Msa0302530:CDS | 50.0% | |
| AGTCCCTCCGTATCCATTTC+AGG | + | chr2_3:59327762-59327781 | None:intergenic | 50.0% | |
| ! | TCTCAGTTCGCTTTGGCTTC+TGG | + | chr2_3:59327803-59327822 | None:intergenic | 50.0% |
| AAAAAGGCCTGCGAATTCGG+CGG | + | chr2_3:59327836-59327855 | None:intergenic | 50.0% | |
| TGTTGCCGAAGTTGAAGCAC+TGG | - | chr2_3:59327857-59327876 | Msa0302530:CDS | 50.0% | |
| TCCAGTTCCAAGTCTCTCGA+CGG | + | chr2_3:59327889-59327908 | None:intergenic | 50.0% | |
| TCGAGAGACTTGGAACTGGA+AGG | - | chr2_3:59327889-59327908 | Msa0302530:CDS | 50.0% | |
| TCCTTAATCGACCGTGTGCA+TGG | - | chr2_3:59328095-59328114 | Msa0302530:intron | 50.0% | |
| GGCTCACCTCTTCTTTGTTG+AGG | + | chr2_3:59328742-59328761 | None:intergenic | 50.0% | |
| GGTTCTTTCCCTGTTTGGAG+AGG | - | chr2_3:59329120-59329139 | Msa0302530:five_prime_UTR | 50.0% | |
| CATGGCTGGGAGGGAAACAA+TGG | - | chr2_3:59324948-59324967 | Msa0302530:intron | 55.0% | |
| ! | GAGATATGGTGGCGCAGAAG+AGG | - | chr2_3:59325172-59325191 | Msa0302530:intron | 55.0% |
| !! | CAATAAAGTGCCGGCGGCTA+CGG | + | chr2_3:59325430-59325449 | None:intergenic | 55.0% |
| GATCCGTCACCAGGTGTGAT+TGG | + | chr2_3:59325468-59325487 | None:intergenic | 55.0% | |
| GTACCAATCGGTACTGCGAC+TGG | - | chr2_3:59325960-59325979 | Msa0302530:CDS | 55.0% | |
| GACTGGAGCATGCTGTGTTG+AGG | - | chr2_3:59325977-59325996 | Msa0302530:CDS | 55.0% | |
| GGTGGCAATGCCAAGTTGTC+GGG | - | chr2_3:59326038-59326057 | Msa0302530:CDS | 55.0% | |
| GTGGCAATGCCAAGTTGTCG+GGG | - | chr2_3:59326039-59326058 | Msa0302530:CDS | 55.0% | |
| ! | TGAAGCCCAAAGCATCCAGC+TGG | + | chr2_3:59327155-59327174 | None:intergenic | 55.0% |
| ! | GGATGCTTTGGGCTTCACCT+TGG | - | chr2_3:59327158-59327177 | Msa0302530:CDS | 55.0% |
| CGGTACGCACCAACCACTTA+CGG | + | chr2_3:59327358-59327377 | None:intergenic | 55.0% | |
| !! | CGCTTTGGCTTCTGGTTCAC+TGG | + | chr2_3:59327795-59327814 | None:intergenic | 55.0% |
| GTTGAAGCCGTCGAGAGACT+TGG | - | chr2_3:59327879-59327898 | Msa0302530:CDS | 55.0% | |
| GCCATGCACACGGTCGATTA+AGG | + | chr2_3:59328099-59328118 | None:intergenic | 55.0% | |
| TCCCTCCCAGCCATGCTTGA+GGG | + | chr2_3:59324943-59324962 | None:intergenic | 60.0% | |
| TTCCCTCCCAGCCATGCTTG+AGG | + | chr2_3:59324944-59324963 | None:intergenic | 60.0% | |
| TGGCAGGGTCAAGCAACACG+TGG | - | chr2_3:59325106-59325125 | Msa0302530:intron | 60.0% | |
| CTAGGTGATCGTGTGGCACG+CGG | + | chr2_3:59325237-59325256 | None:intergenic | 60.0% | |
| GCGTGCCACACGATCACCTA+GGG | - | chr2_3:59325236-59325255 | Msa0302530:CDS | 60.0% | |
| TTATTGGCCACCGTAGCCGC+CGG | - | chr2_3:59325417-59325436 | Msa0302530:CDS | 60.0% | |
| !! | GCTCCAGTCGCAGTACCGAT+TGG | + | chr2_3:59325966-59325985 | None:intergenic | 60.0% |
| CCACTTACGGCAGAACCCGA+TGG | + | chr2_3:59327345-59327364 | None:intergenic | 60.0% | |
| CCATCGGGTTCTGCCGTAAG+TGG | - | chr2_3:59327342-59327361 | Msa0302530:CDS | 60.0% | |
| CGGGTTCTGCCGTAAGTGGT+TGG | - | chr2_3:59327346-59327365 | Msa0302530:CDS | 60.0% | |
| GCCGTCGAGAGACTTGGAAC+TGG | - | chr2_3:59327885-59327904 | Msa0302530:CDS | 60.0% | |
| TCCTCGCCCTCAAGCATGGC+TGG | - | chr2_3:59324934-59324953 | Msa0302530:intron | 65.0% | |
| CCTCGCCCTCAAGCATGGCT+GGG | - | chr2_3:59324935-59324954 | Msa0302530:intron | 65.0% | |
| GCCCTCAAGCATGGCTGGGA+GGG | - | chr2_3:59324939-59324958 | Msa0302530:intron | 65.0% | |
| ! | CGTGTGGCACGCGGCTTTGT+TGG | + | chr2_3:59325228-59325247 | None:intergenic | 65.0% |
| CGCGTGCCACACGATCACCT+AGG | - | chr2_3:59325235-59325254 | Msa0302530:CDS | 65.0% | |
| !! | TAAAGTGCCGGCGGCTACGG+TGG | + | chr2_3:59325427-59325446 | None:intergenic | 65.0% |
| CACAACGCCGCCGAATTCGC+AGG | - | chr2_3:59327826-59327845 | Msa0302530:intron | 65.0% | |
| CCCAGCCATGCTTGAGGGCG+AGG | + | chr2_3:59324938-59324957 | None:intergenic | 70.0% | |
| CGCCCTCAAGCATGGCTGGG+AGG | - | chr2_3:59324938-59324957 | Msa0302530:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 59323913 | 59329200 | 59323913 | ID=Msa0302530;Name=Msa0302530 |
| chr2_3 | mRNA | 59323913 | 59329200 | 59323913 | ID=Msa0302530-mRNA-1;Parent=Msa0302530;Name=Msa0302530-mRNA-1;_AED=0.15;_eAED=0.15;_QI=216|0.75|0.88|1|0.87|0.77|9|324|671 |
| chr2_3 | exon | 59323913 | 59324413 | 59323913 | ID=Msa0302530-mRNA-1:exon:19230;Parent=Msa0302530-mRNA-1 |
| chr2_3 | exon | 59325226 | 59325454 | 59325226 | ID=Msa0302530-mRNA-1:exon:19229;Parent=Msa0302530-mRNA-1 |
| chr2_3 | exon | 59325842 | 59326086 | 59325842 | ID=Msa0302530-mRNA-1:exon:19228;Parent=Msa0302530-mRNA-1 |
| chr2_3 | exon | 59326166 | 59326245 | 59326166 | ID=Msa0302530-mRNA-1:exon:19227;Parent=Msa0302530-mRNA-1 |
| chr2_3 | exon | 59326340 | 59326402 | 59326340 | ID=Msa0302530-mRNA-1:exon:19226;Parent=Msa0302530-mRNA-1 |
| chr2_3 | exon | 59326499 | 59326714 | 59326499 | ID=Msa0302530-mRNA-1:exon:19225;Parent=Msa0302530-mRNA-1 |
| chr2_3 | exon | 59326826 | 59327750 | 59326826 | ID=Msa0302530-mRNA-1:exon:19224;Parent=Msa0302530-mRNA-1 |
| chr2_3 | exon | 59327856 | 59328023 | 59327856 | ID=Msa0302530-mRNA-1:exon:19223;Parent=Msa0302530-mRNA-1 |
| chr2_3 | exon | 59329072 | 59329200 | 59329072 | ID=Msa0302530-mRNA-1:exon:19222;Parent=Msa0302530-mRNA-1 |
| chr2_3 | five_prime_UTR | 59329072 | 59329200 | 59329072 | ID=Msa0302530-mRNA-1:five_prime_utr;Parent=Msa0302530-mRNA-1 |
| chr2_3 | five_prime_UTR | 59327937 | 59328023 | 59327937 | ID=Msa0302530-mRNA-1:five_prime_utr;Parent=Msa0302530-mRNA-1 |
| chr2_3 | CDS | 59327856 | 59327936 | 59327856 | ID=Msa0302530-mRNA-1:cds;Parent=Msa0302530-mRNA-1 |
| chr2_3 | CDS | 59326826 | 59327750 | 59326826 | ID=Msa0302530-mRNA-1:cds;Parent=Msa0302530-mRNA-1 |
| chr2_3 | CDS | 59326499 | 59326714 | 59326499 | ID=Msa0302530-mRNA-1:cds;Parent=Msa0302530-mRNA-1 |
| chr2_3 | CDS | 59326340 | 59326402 | 59326340 | ID=Msa0302530-mRNA-1:cds;Parent=Msa0302530-mRNA-1 |
| chr2_3 | CDS | 59326166 | 59326245 | 59326166 | ID=Msa0302530-mRNA-1:cds;Parent=Msa0302530-mRNA-1 |
| chr2_3 | CDS | 59325842 | 59326086 | 59325842 | ID=Msa0302530-mRNA-1:cds;Parent=Msa0302530-mRNA-1 |
| chr2_3 | CDS | 59325226 | 59325454 | 59325226 | ID=Msa0302530-mRNA-1:cds;Parent=Msa0302530-mRNA-1 |
| chr2_3 | CDS | 59324237 | 59324413 | 59324237 | ID=Msa0302530-mRNA-1:cds;Parent=Msa0302530-mRNA-1 |
| chr2_3 | three_prime_UTR | 59323913 | 59324236 | 59323913 | ID=Msa0302530-mRNA-1:three_prime_utr;Parent=Msa0302530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
