AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0141660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0141660 MtrunA17_Chr1g0173231 95.724 1146 37 3 1 1142 1 1138 0.0 2218
Msa0141660 MtrunA17_Chr1g0185981 29.112 1137 727 26 8 1108 10 1103 3.34e-114 385
Msa0141660 MtrunA17_Chr1g0185991 28.671 1144 736 29 1 1108 6 1105 2.12e-105 360
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0141660 AT4G23540.1 45.351 1140 584 15 3 1116 5 1131 0.0 924
Msa0141660 AT2G34357.1 27.130 1021 683 20 12 1008 24 1007 1.52e-83 298

Find 262 sgRNAs with CRISPR-Local

Find 1117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAACACGCATTTCATTAA+AGG 0.122066 1_4:-228233 Msa0141660:intron
TTCCAAGGCCTTCATATTTC+TGG 0.123751 1_4:+228312 None:intergenic
GCTATACTTATTCAAATATT+TGG 0.126336 1_4:-232716 Msa0141660:CDS
TCTTGCTTCTTATGTATCTT+TGG 0.140771 1_4:-236536 Msa0141660:CDS
GTCCTCGCTTGCTTCCTTTA+TGG 0.153969 1_4:-237862 Msa0141660:CDS
ATGATACAAATTCAAATTTA+AGG 0.162196 1_4:-222927 Msa0141660:CDS
AACAATTAATATATTTGTTT+TGG 0.168563 1_4:+222406 None:intergenic
GATTGGGATTCTGTTAAATT+AGG 0.168752 1_4:-237669 Msa0141660:CDS
TCAGAAGTGCATAAATTATT+TGG 0.173687 1_4:-236667 Msa0141660:CDS
TTTACGACTAGCCTTCTTAA+AGG 0.199044 1_4:+232614 None:intergenic
CTTACTTCATGCATAACTTA+TGG 0.199978 1_4:-222567 Msa0141660:three_prime_UTR
TTTAACAATACATTCCTTTC+AGG 0.212688 1_4:-226565 Msa0141660:intron
TGGTTCGTGCCCAAGAATTA+TGG 0.234735 1_4:-228685 Msa0141660:CDS
GTGAGGGAAGGGGAGGGTTT+GGG 0.248782 1_4:-237756 Msa0141660:CDS
GGTGAGGGAAGGGGAGGGTT+TGG 0.250890 1_4:-237757 Msa0141660:CDS
GTGGCGATGGTGCGGGGCGG+GGG 0.252131 1_4:+238013 None:intergenic
AAATATATGGCACACTTCTA+TGG 0.255131 1_4:+222734 None:intergenic
CAGATAATGGGATATCTTTC+CGG 0.268886 1_4:-224513 Msa0141660:CDS
CTTGCTTCTTATGTATCTTT+GGG 0.269001 1_4:-236535 Msa0141660:CDS
GCGCTTCCGCTTGTGCCGAC+TGG 0.273333 1_4:-237834 Msa0141660:CDS
GGTGGCGATGGTGCGGGGCG+GGG 0.278693 1_4:+238012 None:intergenic
CTGTACTAATTAATAAGCTT+TGG 0.280609 1_4:+235754 None:intergenic
GTGCTATTCTTCTAAATATA+TGG 0.280775 1_4:-226303 Msa0141660:CDS
CGCTTCCGCTTGTGCCGACT+GGG 0.281611 1_4:-237833 Msa0141660:CDS
GAATAACGATTATATAAAAT+TGG 0.286445 1_4:+222458 None:intergenic
GCAATGGACTTACTTTATAC+TGG 0.289383 1_4:-236460 Msa0141660:CDS
AGAACTTTAGGAACAACTTT+AGG 0.292111 1_4:+236691 None:intergenic
ATTCTTCAGGTGCTCGATAT+TGG 0.294124 1_4:-226646 Msa0141660:intron
TTCTCTGATTGAAGAGGTTT+TGG 0.296674 1_4:+238131 None:intergenic
TGCACTTCTGAAAGAACTTT+AGG 0.299391 1_4:+236679 None:intergenic
GTCCATTGCAAGTCTTAATA+TGG 0.314544 1_4:+236474 None:intergenic
GGATATCGCGGCAGCGAAAT+AGG 0.321178 1_4:+237923 None:intergenic
ATTGGGATTCTGTTAAATTA+GGG 0.326194 1_4:-237668 Msa0141660:CDS
AGCTGCACTTAGCCCTAAAA+AGG 0.327527 1_4:-228413 Msa0141660:CDS
AGGTGGCGATGGTGCGGGGC+GGG 0.329674 1_4:+238011 None:intergenic
TCTTGGGTGTTCGAAATATC+AGG 0.330937 1_4:+223075 None:intergenic
ATCTTGAAGCAGTACATTAC+TGG 0.335596 1_4:-232684 Msa0141660:CDS
CGGAAGCGCGATTGCCATAA+AGG 0.336441 1_4:+237848 None:intergenic
CTATCTCTAGGACTATATTT+CGG 0.336578 1_4:+236575 None:intergenic
TTACTTCATGCATAACTTAT+GGG 0.337135 1_4:-222566 Msa0141660:three_prime_UTR
ACATCTGTAACAGGCTGTCT+TGG 0.340701 1_4:-224273 Msa0141660:intron
GTTGTTGGTGAGGGAAGGGG+AGG 0.342923 1_4:-237763 Msa0141660:CDS
GATGTTGTTGGTGAGGGAAG+GGG 0.344751 1_4:-237766 Msa0141660:CDS
GAAGTAATCCCCATAATTCT+TGG 0.345368 1_4:+228675 None:intergenic
CTGAAACAAGTCTTTCTCTT+GGG 0.351101 1_4:+223059 None:intergenic
ACTGACAAAAGATGCTCATT+TGG 0.351349 1_4:+235630 None:intergenic
ACCAACACAGCATAAATATA+TGG 0.356404 1_4:+222721 None:intergenic
CAAGGAGGTGGCGATGGTGC+GGG 0.364349 1_4:+238006 None:intergenic
TGTACTAATTAATAAGCTTT+GGG 0.366608 1_4:+235755 None:intergenic
AGAAAATCCATGTACTTCTC+TGG 0.369358 1_4:+223934 None:intergenic
TTAGTACATGTAGGACTTCC+TGG 0.370347 1_4:+236746 None:intergenic
GCTGAAACAAGTCTTTCTCT+TGG 0.374263 1_4:+223058 None:intergenic
AAACTGAACCAACTAAGTTT+AGG 0.377714 1_4:-222993 Msa0141660:CDS
CATCTGTAACAGGCTGTCTT+GGG 0.380218 1_4:-224272 Msa0141660:intron
TCTAGTTTGTCAACCTATGA+TGG 0.385253 1_4:-236407 Msa0141660:CDS
GGGATGTTGTTGGTGAGGGA+AGG 0.390440 1_4:-237768 Msa0141660:CDS
TACCTTAGGGCGTTTATCAA+TGG 0.391563 1_4:+237623 None:intergenic
AAGGAGGTGGCGATGGTGCG+GGG 0.396365 1_4:+238007 None:intergenic
TGTACTAAATGTAGTTAATC+TGG 0.396908 1_4:-236731 Msa0141660:CDS
GGATGTTGTTGGTGAGGGAA+GGG 0.398609 1_4:-237767 Msa0141660:CDS
TATCTCAACAAGATTATCAT+TGG 0.399119 1_4:+226596 None:intergenic
AGGTGTGAGAGGGAGGGATT+CGG 0.400309 1_4:+237950 None:intergenic
TCTATTGCTGCTATATAAGT+AGG 0.405327 1_4:-222666 Msa0141660:three_prime_UTR
AGGCGGGAGGTGTGAGAGGG+AGG 0.405393 1_4:+237943 None:intergenic
CTGACAAAAGATGCTCATTT+GGG 0.406586 1_4:+235631 None:intergenic
TGATGATAGTCAGCTAGGTT+TGG 0.408258 1_4:-235718 Msa0141660:CDS
TAAATCTTCCACTGTTATCA+AGG 0.410086 1_4:-236884 Msa0141660:CDS
GGCAGAATGTGATGCAGAAC+AGG 0.416111 1_4:-228386 Msa0141660:CDS
GGTTCGTGCCCAAGAATTAT+GGG 0.419098 1_4:-228684 Msa0141660:CDS
TCATTGCTCCTAAACTTAGT+TGG 0.420459 1_4:+222985 None:intergenic
GAGCTGCGGTGAAGTGTGTT+GGG 0.421065 1_4:-237719 Msa0141660:CDS
ATGTAGGACTTCCTGGTGCT+CGG 0.423781 1_4:+236753 None:intergenic
ACTCTCAATATACAGATAAT+GGG 0.429579 1_4:-224525 Msa0141660:intron
TTGATGAATGTAAAGATAAC+GGG 0.431745 1_4:-236786 Msa0141660:CDS
AAAAGAGAAGGGACGAGATC+AGG 0.432026 1_4:+224408 None:intergenic
AGTTGCATGACGACAAAAGC+TGG 0.432172 1_4:+228652 None:intergenic
CGTTTAAACCCTTCACCACT+CGG 0.432550 1_4:-238181 Msa0141660:five_prime_UTR
AGGGAAGCAGCGGAGATTGT+GGG 0.432803 1_4:-237789 Msa0141660:CDS
CTGTGTTCATCAAGAGAGAT+AGG 0.435825 1_4:+232738 None:intergenic
CGACCTCTGCCAGCAGCTCA+TGG 0.436447 1_4:-238051 Msa0141660:CDS
TCTGTAATGCTTTGTTCAGC+AGG 0.438870 1_4:+222597 None:intergenic
TCATATTTGAAATATTAATT+CGG 0.443750 1_4:-223990 Msa0141660:CDS
GCCATATATTTATGCTGTGT+TGG 0.446537 1_4:-222722 Msa0141660:three_prime_UTR
CACCAGAAATATGAAGGCCT+TGG 0.446856 1_4:-228314 Msa0141660:CDS
ACTGTCAGTATTGGTATATA+AGG 0.447276 1_4:-224454 Msa0141660:CDS
ATTTATCTATACCATCAGTC+AGG 0.451532 1_4:+222495 None:intergenic
GAGGTGGCGATGGTGCGGGG+CGG 0.452703 1_4:+238010 None:intergenic
TTTAATGAAATGCGTGTTTG+AGG 0.456352 1_4:+228235 None:intergenic
ATTAGAATGCCTACTTCTCT+TGG 0.458025 1_4:+222948 None:intergenic
GAGGGATTCGGAGGACAGAT+TGG 0.462777 1_4:+237962 None:intergenic
GCATCATACATACCCATCAT+AGG 0.462798 1_4:+236394 None:intergenic
ACAACTTTAGGATAAAGATT+AGG 0.463348 1_4:+236703 None:intergenic
AGCATCACTTGCTTTCTACA+TGG 0.463585 1_4:-232661 Msa0141660:CDS
TGTTTGTTTCCACGCGCTGA+TGG 0.464305 1_4:-226216 Msa0141660:CDS
CGGCCGCAGCGGCAAGGAGG+TGG 0.466229 1_4:+237994 None:intergenic
CCAAATCAAACAAGTTCAAA+AGG 0.468309 1_4:-222804 Msa0141660:CDS
GTTATTCATGTTGAGACTTG+TGG 0.468609 1_4:-222442 Msa0141660:three_prime_UTR
GCAAGGAGGTGGCGATGGTG+CGG 0.469196 1_4:+238005 None:intergenic
TGTAGGACTTCCTGGTGCTC+GGG 0.471956 1_4:+236754 None:intergenic
TACTGGACAACCAAGCTTGT+GGG 0.473084 1_4:-236443 Msa0141660:CDS
CTCAAGTCTCGGCACTTACA+AGG 0.474866 1_4:-236642 Msa0141660:CDS
GGAGAGCGGCCGCAGCGGCA+AGG 0.475077 1_4:+237988 None:intergenic
GAAAATCCATGTACTTCTCT+GGG 0.475420 1_4:+223935 None:intergenic
AATTCTCATTTGTATCTATG+AGG 0.482462 1_4:-234666 Msa0141660:CDS
AAAAGTTTCACTCACGGTGA+TGG 0.482608 1_4:-222868 Msa0141660:CDS
CCCTTGGCAGCTGAAACTTC+AGG 0.489925 1_4:+223207 None:intergenic
CAAAAGGAAGTAATAGATGC+TGG 0.491307 1_4:-222788 Msa0141660:exon
ATGCAGCTTCAGAAATGCAT+TGG 0.493644 1_4:-232807 Msa0141660:intron
ATTATTTGGTTCTCAAGTCT+CGG 0.494691 1_4:-236653 Msa0141660:CDS
CGTAACGGTCCATGAGCTGC+TGG 0.494865 1_4:+238042 None:intergenic
AAGTAATCCCCATAATTCTT+GGG 0.495949 1_4:+228676 None:intergenic
GTTGATGAATGTAAAGATAA+CGG 0.497538 1_4:-236787 Msa0141660:CDS
AAATGTTTCCACGGCACTAC+AGG 0.499080 1_4:-228555 Msa0141660:intron
AAAGTTTCACTCACGGTGAT+GGG 0.500845 1_4:-222867 Msa0141660:CDS
CAGCGGCAAGGAGGTGGCGA+TGG 0.501039 1_4:+238000 None:intergenic
CTATGAAAGTAACTGCTTCG+AGG 0.504201 1_4:-236813 Msa0141660:CDS
GCCTGAAGTTTCAGCTGCCA+AGG 0.504485 1_4:-223208 Msa0141660:CDS
CTCATTATTAGCCTTGCTAT+CGG 0.505004 1_4:+234603 None:intergenic
TTGAGAGACTTATCCTGTGT+TGG 0.505330 1_4:-225035 Msa0141660:CDS
GGAGATTGTGGGGATGTTGT+TGG 0.507850 1_4:-237778 Msa0141660:CDS
GAAAATCCCGTCTCATCACT+TGG 0.510973 1_4:+227829 None:intergenic
ATCGCGGCAGCGAAATAGGC+GGG 0.511943 1_4:+237927 None:intergenic
GCAGCTTTCTTTGAATAAGC+AGG 0.512074 1_4:+228337 None:intergenic
TCTTGCAAAGTCCTTTAAGA+AGG 0.513558 1_4:-232625 Msa0141660:CDS
AGAGCTGCGGTGAAGTGTGT+TGG 0.514376 1_4:-237720 Msa0141660:CDS
AAACAACGGCCGAGTGGTGA+AGG 0.514421 1_4:+238172 None:intergenic
TGAGGGAAACACTGCATCAC+AGG 0.514681 1_4:-235820 Msa0141660:CDS
TCAGATCAGCCAAGAGAAGT+AGG 0.514953 1_4:-222957 Msa0141660:CDS
GAGGGAAGCAGCGGAGATTG+TGG 0.517141 1_4:-237790 Msa0141660:CDS
GGCGGGAGGTGTGAGAGGGA+GGG 0.517906 1_4:+237944 None:intergenic
TATCGGAAGTCTGAATCATC+AGG 0.519138 1_4:+234620 None:intergenic
TTGTTGGTGAGGGAAGGGGA+GGG 0.520080 1_4:-237762 Msa0141660:CDS
GCCGACTGGGGCTATCTCTA+CGG 0.521883 1_4:-237820 Msa0141660:CDS
GACTTCGAAACCCGAGCACC+AGG 0.522986 1_4:-236764 Msa0141660:CDS
CTCCATTGATAAACGCCCTA+AGG 0.523150 1_4:-237625 Msa0141660:intron
CTACAATGTTCTCTATCTCT+AGG 0.523458 1_4:+236563 None:intergenic
AGACTCCGACGACGAGGCGG+TGG 0.525388 1_4:+237902 None:intergenic
AAAGGTCAGTCAAGATCTGC+TGG 0.526132 1_4:-228705 Msa0141660:CDS
AGTAGGGATATATCAAGTAA+AGG 0.526196 1_4:-222649 Msa0141660:three_prime_UTR
TTTAAGAAGGCTAGTCGTAA+AGG 0.526608 1_4:-232612 Msa0141660:intron
TGCAGCTTCAGAAATGCATT+GGG 0.526636 1_4:-232806 Msa0141660:intron
GAGGTCGGATGCGTCGTTGA+AGG 0.527147 1_4:+238067 None:intergenic
AGGATAAAGCTTCTAATGTA+CGG 0.527377 1_4:-222837 Msa0141660:CDS
TTGTGGGGATGTTGTTGGTG+AGG 0.527475 1_4:-237773 Msa0141660:CDS
GATGTGCTCAAGCATCGTAT+TGG 0.529446 1_4:-235780 Msa0141660:CDS
TGTGGGGATGTTGTTGGTGA+GGG 0.532985 1_4:-237772 Msa0141660:CDS
CTATCTCTACGGAGAAGGCG+AGG 0.533270 1_4:-237809 Msa0141660:CDS
AACACCCTCTCTGCTACTGA+TGG 0.533660 1_4:-235657 Msa0141660:CDS
GGTCCATGAGCTGCTGGCAG+AGG 0.534316 1_4:+238048 None:intergenic
AAGGTCAGAAGGAAGTATGA+AGG 0.534360 1_4:-222908 Msa0141660:CDS
ATAGCCCCAGTCGGCACAAG+CGG 0.535277 1_4:+237828 None:intergenic
TAACTACATTTAGTACATGT+AGG 0.535522 1_4:+236737 None:intergenic
ATGTTGCTTCTCTTAGAAGC+CGG 0.537002 1_4:-226241 Msa0141660:CDS
AGCTGCCACCAGAAATATGA+AGG 0.538294 1_4:-228320 Msa0141660:CDS
AGTGTCTGCACTGTCAGTAT+TGG 0.539503 1_4:-224463 Msa0141660:CDS
ACAAGTATGAGAAATTTCTC+TGG 0.541380 1_4:+232762 None:intergenic
GCGCGTGGAAACAAACAAAC+CGG 0.542043 1_4:+226222 None:intergenic
GTTCATGATGATAGTCAGCT+AGG 0.542046 1_4:-235723 Msa0141660:CDS
AGAGAAGCAACATCAGTTGG+AGG 0.543491 1_4:+226251 None:intergenic
CTAAGAGAAGCAACATCAGT+TGG 0.545951 1_4:+226248 None:intergenic
AATGCTTTGTTCAGCAGGAA+AGG 0.546920 1_4:+222602 None:intergenic
CATGAGCTGCTGGCAGAGGT+CGG 0.548949 1_4:+238052 None:intergenic
AGAAGGGACGAGATCAGGAA+TGG 0.549262 1_4:+224413 None:intergenic
ATGGGAGGAATTCAAGAGGC+TGG 0.549325 1_4:-222548 Msa0141660:three_prime_UTR
CTGGAGCTGCACAACACTAA+AGG 0.549473 1_4:-222769 Msa0141660:three_prime_UTR
AATTCAAATTTAAGGTCAGA+AGG 0.550103 1_4:-222919 Msa0141660:CDS
TCTGCAGATTAGTTTAGAAG+AGG 0.551027 1_4:-225289 Msa0141660:intron
CCTGAAGTTTCAGCTGCCAA+GGG 0.551029 1_4:-223207 Msa0141660:CDS
GGAGCGGAGAGCGGCCGCAG+CGG 0.551412 1_4:+237983 None:intergenic
CTTAGGGCTTCTAACTTCTG+AGG 0.551937 1_4:-235838 Msa0141660:intron
AGCAAGCGAGGACAGCGATA+CGG 0.552313 1_4:+237872 None:intergenic
GATATCCACCGCCTCGTCGT+CGG 0.552754 1_4:-237907 Msa0141660:CDS
CATTGAGCCAAGTGATGAGA+CGG 0.554611 1_4:-227836 Msa0141660:CDS
AGGTTCTTGACCCACAAGCT+TGG 0.555598 1_4:+236433 None:intergenic
GGAGAAGGCGAGGGAAGCAG+CGG 0.556536 1_4:-237799 Msa0141660:CDS
ATACTGGACAACCAAGCTTG+TGG 0.556735 1_4:-236444 Msa0141660:CDS
TTAGGGCTTCTAACTTCTGA+GGG 0.559117 1_4:-235837 Msa0141660:intron
TTTGGTGATTGTGGAATGAA+AGG 0.560029 1_4:+238149 None:intergenic
AAATAGGCGGGAGGTGTGAG+AGG 0.560340 1_4:+237939 None:intergenic
GAGCCCATCAGTAGCAGAGA+GGG 0.561825 1_4:+235653 None:intergenic
AACCATATTAAGACTTGCAA+TGG 0.562011 1_4:-236476 Msa0141660:CDS
CTAGTTTGTCAACCTATGAT+GGG 0.563890 1_4:-236406 Msa0141660:intron
GATAGTCAGCTAGGTTTGGA+AGG 0.565380 1_4:-235714 Msa0141660:CDS
CTATTGCTGCTATATAAGTA+GGG 0.565996 1_4:-222665 Msa0141660:three_prime_UTR
ATGCTAACTAGTTTGTGATA+CGG 0.566818 1_4:+225002 None:intergenic
CAAGGCCTTCATATTTCTGG+TGG 0.570991 1_4:+228315 None:intergenic
GACTAGTAACAGCAGTGTGT+TGG 0.574331 1_4:-227860 Msa0141660:CDS
GAAATATTAATTCGGAAGTG+TGG 0.576280 1_4:-223982 Msa0141660:CDS
TTCTTAAAGGACTTTGCAAG+AGG 0.577541 1_4:+232627 None:intergenic
GATTCAGACTTCCGATAGCA+AGG 0.578072 1_4:-234614 Msa0141660:CDS
AGGTCAGAAGGAAGTATGAA+GGG 0.578400 1_4:-222907 Msa0141660:CDS
GTATTGCATGCCCTGACTGA+TGG 0.581177 1_4:-222506 Msa0141660:three_prime_UTR
AAAGCTTCTAATGTACGGAT+AGG 0.583251 1_4:-222832 Msa0141660:CDS
AGTTTGTGATACGGTTCAGT+AGG 0.585327 1_4:+225011 None:intergenic
TGGGGCTATCTCTACGGAGA+AGG 0.585620 1_4:-237814 Msa0141660:CDS
TCACGGTGATGGGAAGAGAA+AGG 0.588243 1_4:-222857 Msa0141660:CDS
GTTGCATGACGACAAAAGCT+GGG 0.589972 1_4:+228653 None:intergenic
ATTGAGCCAAGTGATGAGAC+GGG 0.590070 1_4:-227835 Msa0141660:CDS
TGTAGGGAAAGGATGAAGCT+AGG 0.591335 1_4:-225097 Msa0141660:intron
TATATTTAGAAGAATAGCAC+GGG 0.591647 1_4:+226306 None:intergenic
GTCTTGAAACAGACGACCAA+CGG 0.592252 1_4:+224171 None:intergenic
ATATCATCTTGTCTTGTCAA+AGG 0.594191 1_4:-226621 Msa0141660:CDS
AGTGATTTCTCTGATTGAAG+AGG 0.595588 1_4:+238125 None:intergenic
GTAATGTACTGCTTCAAGAT+CGG 0.596275 1_4:+232687 None:intergenic
CATGCATGAAAATGTTTCCA+CGG 0.596282 1_4:-228564 Msa0141660:CDS
GTATGAAGGGCAATAAAAGC+CGG 0.600813 1_4:-222894 Msa0141660:CDS
TGCAGCAACGATAAAAGAGA+AGG 0.601738 1_4:+224396 None:intergenic
ACACCCTCTCTGCTACTGAT+GGG 0.603898 1_4:-235656 Msa0141660:CDS
AACAACGGCCGAGTGGTGAA+GGG 0.604640 1_4:+238173 None:intergenic
TTGACTCGAATAAGATTCCA+AGG 0.604652 1_4:+228297 None:intergenic
TGTGAGAGGGAGGGATTCGG+AGG 0.605153 1_4:+237953 None:intergenic
GGGAAGCAGCGGAGATTGTG+GGG 0.606602 1_4:-237788 Msa0141660:CDS
TTTGGGTGATAAGAACCCAC+TGG 0.606709 1_4:-236518 Msa0141660:CDS
CGGTTCAAAAGTTTCACTCA+CGG 0.607639 1_4:-222874 Msa0141660:CDS
TGCCATAAAGGAAGCAAGCG+AGG 0.610510 1_4:+237860 None:intergenic
TATCTCTACGGAGAAGGCGA+GGG 0.617725 1_4:-237808 Msa0141660:CDS
TCCGTAGAGATAGCCCCAGT+CGG 0.618744 1_4:+237819 None:intergenic
TTTATCTATACCATCAGTCA+GGG 0.620908 1_4:+222496 None:intergenic
TTTGAGCTTGTAGATTGTGA+AGG 0.620960 1_4:-227892 Msa0141660:CDS
TGTTTCTAGCTTGAGAGCTG+CGG 0.620980 1_4:-237733 Msa0141660:CDS
GGACAGATTGGAGCGGAGAG+CGG 0.622598 1_4:+237974 None:intergenic
AATAGGCGGGAGGTGTGAGA+GGG 0.626266 1_4:+237940 None:intergenic
ATATATTTAGAAGAATAGCA+CGG 0.626382 1_4:+226305 None:intergenic
TCCTTTGTAGGTCGGAGCGG+AGG 0.627313 1_4:-223101 Msa0141660:intron
GAGCGGCCGCAGCGGCAAGG+AGG 0.627589 1_4:+237991 None:intergenic
CTTCATGCATAACTTATGGG+AGG 0.630214 1_4:-222563 Msa0141660:three_prime_UTR
CGACGAGGCGGTGGATATCG+CGG 0.630776 1_4:+237911 None:intergenic
CACTCCTTTGTAGGTCGGAG+CGG 0.634577 1_4:-223104 Msa0141660:intron
TAGGTTGACAAACTAGAGGA+AGG 0.635040 1_4:+236413 None:intergenic
GTTGGTGTGCAGAATCGACA+TGG 0.637497 1_4:-223270 Msa0141660:intron
GGTTACCCCAGAGAAGTACA+TGG 0.637725 1_4:-223941 Msa0141660:CDS
AGAAGAGGATGTGAACTCGA+AGG 0.637958 1_4:-225274 Msa0141660:CDS
ACCTTTAAGAAATACCTGAA+AGG 0.640504 1_4:+226551 None:intergenic
GTATCACAAACTAGTTAGCA+TGG 0.641218 1_4:-225000 Msa0141660:intron
TATCGCGGCAGCGAAATAGG+CGG 0.642700 1_4:+237926 None:intergenic
AGCTGCGGTGAAGTGTGTTG+GGG 0.643399 1_4:-237718 Msa0141660:CDS
TCGCCACCTCCTTGCCGCTG+CGG 0.645545 1_4:-237997 Msa0141660:CDS
GAGCTGCACAACACTAAAGG+TGG 0.646536 1_4:-222766 Msa0141660:three_prime_UTR
GTTCGTGCCCAAGAATTATG+GGG 0.649720 1_4:-228683 Msa0141660:CDS
TGGTTCTGCTGCTGTCAGAG+TGG 0.651856 1_4:-223962 Msa0141660:CDS
GATCAGGAATGGAGGCACAA+AGG 0.654563 1_4:+224424 None:intergenic
GCTTCCGCTTGTGCCGACTG+GGG 0.655232 1_4:-237832 Msa0141660:CDS
CAATGTGAACCATCAGCGCG+TGG 0.655920 1_4:+226207 None:intergenic
AGGGACGAGATCAGGAATGG+AGG 0.658196 1_4:+224416 None:intergenic
GCTGATGGTTCACATTGTGA+AGG 0.658228 1_4:-226201 Msa0141660:intron
TTGTGTCTGAAATCATCCGT+TGG 0.659965 1_4:-224187 Msa0141660:CDS
ATCATAGGTTGACAAACTAG+AGG 0.660552 1_4:+236409 None:intergenic
GTCTAGAGACTCCGACGACG+AGG 0.666010 1_4:+237896 None:intergenic
AATGAAATGCGTGTTTGAGG+AGG 0.668780 1_4:+228238 None:intergenic
GCTAGCTTCCTTGATAACAG+TGG 0.668937 1_4:+236876 None:intergenic
AAATCTGACCTGTAGTGCCG+TGG 0.673204 1_4:+228547 None:intergenic
ACTTATGGGAGGAATTCAAG+AGG 0.679574 1_4:-222552 Msa0141660:three_prime_UTR
TGTGGAATGAAAGGAAACAA+CGG 0.680157 1_4:+238158 None:intergenic
CTGAAGTTTCAGCTGCCAAG+GGG 0.681640 1_4:-223206 Msa0141660:intron
GCAGCAACGATAAAAGAGAA+GGG 0.688732 1_4:+224397 None:intergenic
CGGTTCAGTAGGACCAACAC+AGG 0.688909 1_4:+225022 None:intergenic
AAAATCCATGTACTTCTCTG+GGG 0.689291 1_4:+223936 None:intergenic
GCGGCAGCGAAATAGGCGGG+AGG 0.692837 1_4:+237930 None:intergenic
ATTCGGAGGACAGATTGGAG+CGG 0.696199 1_4:+237967 None:intergenic
GAAAGGAAACAACGGCCGAG+TGG 0.696903 1_4:+238166 None:intergenic
GGAGCCCATCAGTAGCAGAG+AGG 0.700244 1_4:+235652 None:intergenic
TAGAGACTCCGACGACGAGG+CGG 0.713415 1_4:+237899 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATTATTTATTATGCAA+TGG - chr1_4:223024-223043 Msa0141660:CDS 10.0%
!!! TTATTTTCTCAAAATTTTAT+CGG + chr1_4:223182-223201 None:intergenic 10.0%
!! ATCTTAATTCTAATTAAAAT+TGG + chr1_4:227003-227022 None:intergenic 10.0%
!!! TTATAGTATTATTTATGTTT+TGG - chr1_4:227705-227724 Msa0141660:intron 10.0%
!!! AATAAAATATTACAATCTTT+TGG - chr1_4:228239-228258 Msa0141660:CDS 10.0%
!! AATATTATTATCTTTCATAA+AGG + chr1_4:228760-228779 None:intergenic 10.0%
!! ATAAATTATAAATACAAACA+AGG + chr1_4:229604-229623 None:intergenic 10.0%
!!! GTATTTTTTTTTTATAAACA+AGG + chr1_4:234712-234731 None:intergenic 10.0%
!!! TCATATTTGAAATATTAATT+CGG - chr1_4:236601-236620 Msa0141660:CDS 10.0%
!!! ACAATTAATATATTTGTTTT+GGG + chr1_4:238187-238206 None:intergenic 10.0%
!!! AACAATTAATATATTTGTTT+TGG + chr1_4:238188-238207 None:intergenic 10.0%
!! GATAAAACTAACAATTAATT+TGG + chr1_4:223064-223083 None:intergenic 15.0%
!! CAATTAAATGATTTCTATAA+GGG + chr1_4:224235-224254 None:intergenic 15.0%
!! ACAATTAAATGATTTCTATA+AGG + chr1_4:224236-224255 None:intergenic 15.0%
!! AATTGTAATTAATCTGATTT+AGG - chr1_4:224250-224269 Msa0141660:CDS 15.0%
!! AATACTAAAAACGTAATATA+AGG + chr1_4:224700-224719 None:intergenic 15.0%
!! ATACATAACATGATTAATTA+AGG + chr1_4:226096-226115 None:intergenic 15.0%
!!! AAACATAAGAATAACTTTTT+AGG - chr1_4:226300-226319 Msa0141660:CDS 15.0%
!! AAAAAACTATATTGATATGT+TGG + chr1_4:227113-227132 None:intergenic 15.0%
!! AAACATAAATAATAGTAACT+GGG + chr1_4:227611-227630 None:intergenic 15.0%
!! AAAACATAAATAATAGTAAC+TGG + chr1_4:227612-227631 None:intergenic 15.0%
!!! AGTTACTATTATTTATGTTT+TGG - chr1_4:227611-227630 Msa0141660:intron 15.0%
!! ATAATACTATAATAGTAACT+GGG + chr1_4:227697-227716 None:intergenic 15.0%
!! AATAATACTATAATAGTAAC+TGG + chr1_4:227698-227717 None:intergenic 15.0%
!! ATTCTACTTCTATTATAAAT+AGG + chr1_4:229324-229343 None:intergenic 15.0%
!! CTAATTAAACATAATTGATA+TGG + chr1_4:229408-229427 None:intergenic 15.0%
!!! ACTAATGTTTAAATTTTCTA+AGG + chr1_4:230030-230049 None:intergenic 15.0%
!!! TATTTGTTTGTTTTTTCAAT+TGG - chr1_4:232103-232122 Msa0141660:intron 15.0%
!! ATATCAAATATCAATATACA+GGG + chr1_4:232416-232435 None:intergenic 15.0%
!!! AACAAAAAAAAGTAATTTTC+AGG + chr1_4:232458-232477 None:intergenic 15.0%
!!! TCTTTTATAAATTAGTTACT+AGG + chr1_4:232799-232818 None:intergenic 15.0%
!! ATGTCAACTTTAATATTTAT+TGG - chr1_4:233621-233640 Msa0141660:intron 15.0%
!! TTAAACTATAGAAAATGAAT+GGG - chr1_4:233821-233840 Msa0141660:intron 15.0%
!! TTATGTAATATGTAATAACA+AGG + chr1_4:233901-233920 None:intergenic 15.0%
!!! TTTTTTTATAAACAAGGTAT+GGG + chr1_4:234706-234725 None:intergenic 15.0%
!!! TTTTTTTTATAAACAAGGTA+TGG + chr1_4:234707-234726 None:intergenic 15.0%
!! TTACTTTGAACTATTAAAAA+GGG + chr1_4:235985-236004 None:intergenic 15.0%
!! ATTACTTTGAACTATTAAAA+AGG + chr1_4:235986-236005 None:intergenic 15.0%
!! ATGATACAAATTCAAATTTA+AGG - chr1_4:237664-237683 Msa0141660:CDS 15.0%
!! GAATAACGATTATATAAAAT+TGG + chr1_4:238136-238155 None:intergenic 15.0%
!!! TTTCTTTTAGGACAAAAAAA+AGG - chr1_4:224329-224348 Msa0141660:intron 20.0%
!! TGTACTAATTAATAAGCTTT+GGG + chr1_4:224839-224858 None:intergenic 20.0%
!! TTTATTCTTTACAGATACTT+TGG - chr1_4:225141-225160 Msa0141660:intron 20.0%
!!! ATTTTAATTTCAAACCTCTT+AGG - chr1_4:225226-225245 Msa0141660:intron 20.0%
!! TTCTTATAAAAGAGAAAAGA+AGG + chr1_4:225317-225336 None:intergenic 20.0%
!!! TTTTCTCTTTTATAAGAAAC+TGG - chr1_4:225319-225338 Msa0141660:intron 20.0%
!!! TTGCTCTTTTTTATTTTGTA+AGG - chr1_4:225360-225379 Msa0141660:intron 20.0%
!! ATAGAAAACTATGGTATTAT+GGG + chr1_4:225818-225837 None:intergenic 20.0%
!! AATAGAAAACTATGGTATTA+TGG + chr1_4:225819-225838 None:intergenic 20.0%
!! AACTGTAAAATAGAAAACTA+TGG + chr1_4:225827-225846 None:intergenic 20.0%
!!! GAAAAATATTTTGGATGTAT+TGG - chr1_4:226026-226045 Msa0141660:intron 20.0%
!!! TACAATATTAATCAAGGTTT+TGG + chr1_4:226661-226680 None:intergenic 20.0%
!! AGTCTATACAATATTAATCA+AGG + chr1_4:226667-226686 None:intergenic 20.0%
!!! GTTTCTCTTATAGTTTTTTT+AGG - chr1_4:226841-226860 Msa0141660:intron 20.0%
!! ATTACAATTAGGATAAAAGA+GGG + chr1_4:227473-227492 None:intergenic 20.0%
!! AATTACAATTAGGATAAAAG+AGG + chr1_4:227474-227493 None:intergenic 20.0%
!! GCTATACTTATTCAAATATT+TGG - chr1_4:227875-227894 Msa0141660:CDS 20.0%
!! TTCTATTATAAATAGGTACA+AGG + chr1_4:229317-229336 None:intergenic 20.0%
!! CTCTATTATAAATACAAACA+AGG - chr1_4:229472-229491 Msa0141660:intron 20.0%
!! TTCTGTTATAAATACAAACA+TGG - chr1_4:229788-229807 Msa0141660:intron 20.0%
!! GTTGAAACTATTGAAAATTA+TGG + chr1_4:230401-230420 None:intergenic 20.0%
!!! CTTTAAAAACTTAAAGTTGA+TGG + chr1_4:230423-230442 None:intergenic 20.0%
!!! ATTTTGACAAATAGTCATTT+TGG - chr1_4:231663-231682 Msa0141660:intron 20.0%
!!! TTTTGACAAATAGTCATTTT+GGG - chr1_4:231664-231683 Msa0141660:intron 20.0%
!!! ATATTTTTTCGTTAAGCTTT+TGG - chr1_4:231779-231798 Msa0141660:intron 20.0%
!! AAAATTCAAGATCATTTACA+TGG + chr1_4:232132-232151 None:intergenic 20.0%
!! TATCAAATATCAATATACAG+GGG + chr1_4:232415-232434 None:intergenic 20.0%
!! GATATCAAATATCAATATAC+AGG + chr1_4:232417-232436 None:intergenic 20.0%
!!! TTGTGTCATTTAAAATTTCT+AGG - chr1_4:232503-232522 Msa0141660:intron 20.0%
!! CTTAAACTATAGAAAATGAA+TGG - chr1_4:233820-233839 Msa0141660:intron 20.0%
!! CTAGTCAAAAGAATTATAAA+GGG + chr1_4:234096-234115 None:intergenic 20.0%
!! ACTAGTCAAAAGAATTATAA+AGG + chr1_4:234097-234116 None:intergenic 20.0%
!! ATATATTTAGAAGAATAGCA+CGG + chr1_4:234289-234308 None:intergenic 20.0%
!!! TTTGGAAAATAGTCTTTTTA+TGG - chr1_4:234532-234551 Msa0141660:intron 20.0%
!!! TTTTTTATAAACAAGGTATG+GGG + chr1_4:234705-234724 None:intergenic 20.0%
!! TAATTACATAGATATCCAAT+GGG + chr1_4:234786-234805 None:intergenic 20.0%
!!! AAAAGAGCATGAAAATAAAT+TGG + chr1_4:235214-235233 None:intergenic 20.0%
!!! GTTTTTTGAACAATGAATAA+AGG - chr1_4:235235-235254 Msa0141660:intron 20.0%
!! TGCATTTATTGCAAAATTAT+TGG + chr1_4:235708-235727 None:intergenic 20.0%
!! TATTAACCTCAAATATTACA+TGG + chr1_4:235791-235810 None:intergenic 20.0%
!!! TGTAATATTTGAGGTTAATA+AGG - chr1_4:235791-235810 Msa0141660:CDS 20.0%
!!! GTAATATTTGAGGTTAATAA+GGG - chr1_4:235792-235811 Msa0141660:CDS 20.0%
!!! TAATATTTGAGGTTAATAAG+GGG - chr1_4:235793-235812 Msa0141660:CDS 20.0%
!! ATAACTCATTAATATATTCC+AGG + chr1_4:236037-236056 None:intergenic 20.0%
!!! TTTTATGATTTCTGTATCTT+TGG + chr1_4:236223-236242 None:intergenic 20.0%
!! CAACAAAGAAAACATTATTA+TGG + chr1_4:236567-236586 None:intergenic 20.0%
!! TTCATATTAAATACCTACAA+TGG - chr1_4:236705-236724 Msa0141660:CDS 20.0%
!!! ATTAAGCTCTAAAATGTTAA+GGG - chr1_4:236827-236846 Msa0141660:CDS 20.0%
!! AAATATCTGTTTGTTTCAAT+AGG + chr1_4:236925-236944 None:intergenic 20.0%
!! AACAACTAAACTAACAATAA+AGG + chr1_4:237030-237049 None:intergenic 20.0%
!!! TTTACATTAACTTTTGCATT+TGG - chr1_4:237088-237107 Msa0141660:intron 20.0%
!!! AAAATTTGTAGTATTTCTAG+AGG - chr1_4:237251-237270 Msa0141660:intron 20.0%
!!! AAATTTGTAGTATTTCTAGA+GGG - chr1_4:237252-237271 Msa0141660:intron 20.0%
! ATTGGGATTCTGTTAAATTA+GGG - chr1_4:222923-222942 Msa0141660:CDS 25.0%
! ATTATTTATTATGCAATGGC+TGG - chr1_4:223028-223047 Msa0141660:CDS 25.0%
! AATCATTGTGCATTTAACAT+TGG - chr1_4:223096-223115 Msa0141660:intron 25.0%
! TTTAGTGTGATCAAATATGT+TGG - chr1_4:223207-223226 Msa0141660:CDS 25.0%
!!! AAGAGTATTGAAGCTAAATT+CGG + chr1_4:223299-223318 None:intergenic 25.0%
! TAAAAGACTCAGAATAGTTT+AGG - chr1_4:223343-223362 Msa0141660:intron 25.0%
! AAAAATCATCAGTTGAGAAA+AGG - chr1_4:223367-223386 Msa0141660:intron 25.0%
!!! GTTGGTGATATTTTAGTTTT+TGG - chr1_4:223404-223423 Msa0141660:intron 25.0%
!!! TGGTTGTTGTTTATTTGTTT+AGG - chr1_4:223638-223657 Msa0141660:intron 25.0%
!! GTTGATGAATGTAAAGATAA+CGG - chr1_4:223804-223823 Msa0141660:intron 25.0%
! TTGATGAATGTAAAGATAAC+GGG - chr1_4:223805-223824 Msa0141660:intron 25.0%
! TAACTACATTTAGTACATGT+AGG + chr1_4:223857-223876 None:intergenic 25.0%
! TGTACTAAATGTAGTTAATC+TGG - chr1_4:223860-223879 Msa0141660:intron 25.0%
!!! ACAACTTTAGGATAAAGATT+AGG + chr1_4:223891-223910 None:intergenic 25.0%
!! TCAGAAGTGCATAAATTATT+TGG - chr1_4:223924-223943 Msa0141660:CDS 25.0%
! AGTTTCAAAAATAGCTTCTA+CGG + chr1_4:223988-224007 None:intergenic 25.0%
!! CATCTTCTGATTTTTCTTTT+AGG - chr1_4:224317-224336 Msa0141660:intron 25.0%
!! ACATGGAAAATGTTTTATAG+AGG + chr1_4:224432-224451 None:intergenic 25.0%
! TAGATATTACTGTGTATTCA+TGG + chr1_4:224560-224579 None:intergenic 25.0%
! CTGTACTAATTAATAAGCTT+TGG + chr1_4:224840-224859 None:intergenic 25.0%
! AATTCTTTGGTCTATCTTAT+TGG - chr1_4:225064-225083 Msa0141660:CDS 25.0%
! TTTACAGATACTTTGGTATA+TGG - chr1_4:225148-225167 Msa0141660:intron 25.0%
!!! CTTTTAGTTTCTTTATGTAG+CGG - chr1_4:225260-225279 Msa0141660:CDS 25.0%
!!! TTTTAGTTTCTTTATGTAGC+GGG - chr1_4:225261-225280 Msa0141660:CDS 25.0%
! GTGCTTATATACTTATCAAT+TGG + chr1_4:225694-225713 None:intergenic 25.0%
! TTGATAAGTATATAAGCACT+TGG - chr1_4:225695-225714 Msa0141660:intron 25.0%
! AGATTACGAAGAATAAGATT+GGG + chr1_4:225889-225908 None:intergenic 25.0%
! AAGATTACGAAGAATAAGAT+TGG + chr1_4:225890-225909 None:intergenic 25.0%
! TTATTCTTCGTAATCTTTGT+TGG - chr1_4:225893-225912 Msa0141660:intron 25.0%
! AATTCTCATTTGTATCTATG+AGG - chr1_4:225925-225944 Msa0141660:intron 25.0%
!!! AGTACTGGTGAAAAATATTT+TGG - chr1_4:226017-226036 Msa0141660:intron 25.0%
!!! TCTCACTCATTTTAGAATTA+TGG - chr1_4:226135-226154 Msa0141660:intron 25.0%
!!! CTCACTCATTTTAGAATTAT+GGG - chr1_4:226136-226155 Msa0141660:intron 25.0%
!! AATTATGGGTAGTTCATTTT+AGG - chr1_4:226150-226169 Msa0141660:intron 25.0%
! ATAATTGTCTTTCTCATGTT+TGG - chr1_4:226190-226209 Msa0141660:intron 25.0%
! TAATTGTCTTTCTCATGTTT+GGG - chr1_4:226191-226210 Msa0141660:intron 25.0%
!!! TTTTTAGGTTGAATTAGATC+AGG - chr1_4:226237-226256 Msa0141660:CDS 25.0%
! TGATATACGATAGAATATCA+TGG + chr1_4:226760-226779 None:intergenic 25.0%
! AAGAAAGATCTAGAAGTTAA+TGG + chr1_4:226797-226816 None:intergenic 25.0%
! TTTCTCTTATTGTAGATTAC+TGG - chr1_4:226881-226900 Msa0141660:intron 25.0%
!! TTAAAATTGGTAGCAAATCA+TGG + chr1_4:226990-227009 None:intergenic 25.0%
! AATCCAAGAAACTTTATTCA+GGG + chr1_4:227049-227068 None:intergenic 25.0%
! TAATCCAAGAAACTTTATTC+AGG + chr1_4:227050-227069 None:intergenic 25.0%
!! ACATGAAAAGTTTTCTCATT+GGG - chr1_4:227230-227249 Msa0141660:intron 25.0%
!!! AAATTGTAGGGTTTTATGTT+GGG + chr1_4:227302-227321 None:intergenic 25.0%
! TTACAATTAGGATAAAAGAG+GGG + chr1_4:227472-227491 None:intergenic 25.0%
! CTATTGTGATAGATAAGTAT+TGG - chr1_4:228179-228198 Msa0141660:intron 25.0%
!! TGGATGAAAAGAAATGATTT+TGG - chr1_4:228334-228353 Msa0141660:CDS 25.0%
! TAACAAATAGGAAATGTGTA+CGG + chr1_4:228539-228558 None:intergenic 25.0%
!! TTTCCTATTTGTTAAAAACC+TGG - chr1_4:228545-228564 Msa0141660:intron 25.0%
!! AAACCAGGTTTTTAACAAAT+AGG + chr1_4:228551-228570 None:intergenic 25.0%
!!! GTTTGTTATATCTGCTTATT+TGG - chr1_4:228567-228586 Msa0141660:CDS 25.0%
! ACTGAAAGTCAAAATCAAAA+AGG + chr1_4:228649-228668 None:intergenic 25.0%
! AAATTGTAGATATGTGTGAA+TGG - chr1_4:229268-229287 Msa0141660:intron 25.0%
!!! ATTTTGAGTATATGAACACT+GGG + chr1_4:230164-230183 None:intergenic 25.0%
! TCACAAAGCAAATGTTAAAA+GGG + chr1_4:230320-230339 None:intergenic 25.0%
! GAGCACAACAATATATTAAA+TGG - chr1_4:230442-230461 Msa0141660:intron 25.0%
! AATGAGATGAATATAGACTA+GGG + chr1_4:230669-230688 None:intergenic 25.0%
! GGGCTACATAAAATTATAAA+TGG - chr1_4:231039-231058 Msa0141660:intron 25.0%
!! TAGTTACAGTTAATTAGTCT+TGG + chr1_4:231284-231303 None:intergenic 25.0%
!!! CTTGTCATTTTCTATAAAGA+AGG + chr1_4:231322-231341 None:intergenic 25.0%
!! TAATCTATTTCCATTTTGTG+TGG - chr1_4:231615-231634 Msa0141660:intron 25.0%
!! AAAAATATTTGAAGTGAGAG+TGG + chr1_4:231767-231786 None:intergenic 25.0%
!! TTTTCTTGCCTTTCTTTTAT+AGG - chr1_4:232602-232621 Msa0141660:intron 25.0%
!! TTTCTTGCCTTTCTTTTATA+GGG - chr1_4:232603-232622 Msa0141660:intron 25.0%
! TTATAAAAGATTAATTGCGC+CGG - chr1_4:232809-232828 Msa0141660:intron 25.0%
!!! CTGTTTGTTATATGATATTC+TGG + chr1_4:232852-232871 None:intergenic 25.0%
! AGACGATGATTAAAGAAAAT+AGG - chr1_4:233036-233055 Msa0141660:intron 25.0%
! GACGATGATTAAAGAAAATA+GGG - chr1_4:233037-233056 Msa0141660:intron 25.0%
! CTCTTTAGTAGTATTTAAGT+AGG + chr1_4:233215-233234 None:intergenic 25.0%
! TTATAAACTCTCCATATCTT+TGG - chr1_4:233403-233422 Msa0141660:intron 25.0%
! AAGCTCAATCATATTCAAAA+GGG + chr1_4:233792-233811 None:intergenic 25.0%
! AAAGCTCAATCATATTCAAA+AGG + chr1_4:233793-233812 None:intergenic 25.0%
! TAACAAGGAATAGAAAGAAA+GGG + chr1_4:233886-233905 None:intergenic 25.0%
! ATAACAAGGAATAGAAAGAA+AGG + chr1_4:233887-233906 None:intergenic 25.0%
! TATCTCAACAAGATTATCAT+TGG + chr1_4:233998-234017 None:intergenic 25.0%
! TTTAACAATACATTCCTTTC+AGG - chr1_4:234026-234045 Msa0141660:intron 25.0%
! TTAATGTATGCTTGATATGT+AGG - chr1_4:234125-234144 Msa0141660:intron 25.0%
! TATATTTAGAAGAATAGCAC+GGG + chr1_4:234288-234307 None:intergenic 25.0%
!! GTGCTATTCTTCTAAATATA+TGG - chr1_4:234288-234307 Msa0141660:intron 25.0%
! TCTTCATCTATGTATGTATT+TGG - chr1_4:234514-234533 Msa0141660:intron 25.0%
!!! ATATCCATATTTTTACCCAT+TGG - chr1_4:234768-234787 Msa0141660:intron 25.0%
! ATATCCAATGGGTAAAAATA+TGG + chr1_4:234775-234794 None:intergenic 25.0%
! CTAATTACATAGATATCCAA+TGG + chr1_4:234787-234806 None:intergenic 25.0%
!!! CACATTTTTTTCCTACTTTT+CGG + chr1_4:234990-235009 None:intergenic 25.0%
! GAAAAGTAGGAAAAAAATGT+GGG - chr1_4:234989-235008 Msa0141660:intron 25.0%
! ACATACTCTTTAAACTTAAG+TGG - chr1_4:235261-235280 Msa0141660:intron 25.0%
! AGTATACCATGTAATATTTG+AGG - chr1_4:235782-235801 Msa0141660:CDS 25.0%
!! AATATTTGAGGTTAATAAGG+GGG - chr1_4:235794-235813 Msa0141660:CDS 25.0%
! TACTCTCAATATACAGATAA+TGG - chr1_4:236065-236084 Msa0141660:intron 25.0%
! ACTCTCAATATACAGATAAT+GGG - chr1_4:236066-236085 Msa0141660:intron 25.0%
!!! TATTTGCTCTTTAAAACGAA+CGG + chr1_4:236256-236275 None:intergenic 25.0%
!! TTTAACTTTACATCTGTAAC+AGG - chr1_4:236309-236328 Msa0141660:intron 25.0%
!!! AAGACATCATTTTAAAACGA+AGG - chr1_4:236438-236457 Msa0141660:CDS 25.0%
!!! ATGTTTTCTTTGTTGTCTAT+AGG - chr1_4:236572-236591 Msa0141660:CDS 25.0%
!!! GATTAAGCTCTAAAATGTTA+AGG - chr1_4:236826-236845 Msa0141660:CDS 25.0%
!!! ATATACTTTCTAAAGCAACT+TGG + chr1_4:236876-236895 None:intergenic 25.0%
!!! ACAAACAGATATTTTGTTTC+TGG - chr1_4:236931-236950 Msa0141660:CDS 25.0%
!!! CAAACAGATATTTTGTTTCT+GGG - chr1_4:236932-236951 Msa0141660:CDS 25.0%
!!! AAACAGATATTTTGTTTCTG+GGG - chr1_4:236933-236952 Msa0141660:CDS 25.0%
! TTGAGTCAACTAAATTTCAA+AGG + chr1_4:237133-237152 None:intergenic 25.0%
!!! TGGAAAATGCTATTTTGTTT+TGG - chr1_4:237197-237216 Msa0141660:intron 25.0%
!! AATACTACAAATTTTGAACG+AGG + chr1_4:237246-237265 None:intergenic 25.0%
! TTTCAGCAAAAAAAGAGAAA+GGG - chr1_4:237549-237568 Msa0141660:intron 25.0%
!! AATTCAAATTTAAGGTCAGA+AGG - chr1_4:237672-237691 Msa0141660:CDS 25.0%
! TTACTTCATGCATAACTTAT+GGG - chr1_4:238025-238044 Msa0141660:CDS 25.0%
! TGAAGGGTTTAAACGTTTTA+GGG + chr1_4:222405-222424 None:intergenic 30.0%
ATCACTCCATCGAAAAAAAA+TGG - chr1_4:222483-222502 Msa0141660:three_prime_UTR 30.0%
!!! CTTCTTCCATTTTTTTTCGA+TGG + chr1_4:222492-222511 None:intergenic 30.0%
GATTGGGATTCTGTTAAATT+AGG - chr1_4:222922-222941 Msa0141660:CDS 30.0%
CTAAGATTGTTACTACCTTA+GGG + chr1_4:222984-223003 None:intergenic 30.0%
ACTAAGATTGTTACTACCTT+AGG + chr1_4:222985-223004 None:intergenic 30.0%
! TGTTTCTGTCTTTGCTTTAT+AGG + chr1_4:223127-223146 None:intergenic 30.0%
! TTCTCAAAATTTTATCGGTG+TGG + chr1_4:223177-223196 None:intergenic 30.0%
!! AGAGTATTGAAGCTAAATTC+GGG + chr1_4:223298-223317 None:intergenic 30.0%
TCAATACTCTTAGCTACTAT+AGG - chr1_4:223308-223327 Msa0141660:intron 30.0%
CAAACGCTTCACAAATAATT+TGG + chr1_4:223566-223585 None:intergenic 30.0%
CGTTTGATACTTTATGAACA+TGG - chr1_4:223580-223599 Msa0141660:intron 30.0%
TAAATCTTCCACTGTTATCA+AGG - chr1_4:223707-223726 Msa0141660:intron 30.0%
!!! TAGTTTTGTCTGAACTAAAG+AGG - chr1_4:223742-223761 Msa0141660:intron 30.0%
! AGAACTTTAGGAACAACTTT+AGG + chr1_4:223903-223922 None:intergenic 30.0%
!! ATTATTTGGTTCTCAAGTCT+CGG - chr1_4:223938-223957 Msa0141660:CDS 30.0%
! AAATAGCTTCTACGGTTTTA+AGG + chr1_4:223980-223999 None:intergenic 30.0%
!! CTATCTCTAGGACTATATTT+CGG + chr1_4:224019-224038 None:intergenic 30.0%
TCTTGCTTCTTATGTATCTT+TGG - chr1_4:224055-224074 Msa0141660:intron 30.0%
CTTGCTTCTTATGTATCTTT+GGG - chr1_4:224056-224075 Msa0141660:intron 30.0%
AACCATATTAAGACTTGCAA+TGG - chr1_4:224115-224134 Msa0141660:intron 30.0%
! AGATGTTTCTAAACACAATG+AGG + chr1_4:224302-224321 None:intergenic 30.0%
! TGGTATGGAAATTTTATGCT+TGG + chr1_4:224540-224559 None:intergenic 30.0%
ATTACTGTGTATTCATGGTA+TGG + chr1_4:224555-224574 None:intergenic 30.0%
! TGTTGCTGATAATTTTACTG+CGG - chr1_4:224615-224634 Msa0141660:intron 30.0%
AATCTGCAAATGTTGAACTT+AGG - chr1_4:224736-224755 Msa0141660:intron 30.0%
ATCTGCAAATGTTGAACTTA+GGG - chr1_4:224737-224756 Msa0141660:intron 30.0%
TTGGTATATGGTTGTGTTTA+TGG - chr1_4:225160-225179 Msa0141660:intron 30.0%
TGATAAGCATATAACCACTT+GGG - chr1_4:225428-225447 Msa0141660:intron 30.0%
CATTATAAGCAAGCTATCAA+GGG - chr1_4:225458-225477 Msa0141660:intron 30.0%
ATTATAAGCAAGCTATCAAG+GGG - chr1_4:225459-225478 Msa0141660:intron 30.0%
ATAGGGAACTTTGGTATTAT+GGG + chr1_4:225556-225575 None:intergenic 30.0%
CATCCCATATTTCTTAATGT+GGG - chr1_4:225782-225801 Msa0141660:intron 30.0%
AGTCCCACATTAAGAAATAT+GGG + chr1_4:225788-225807 None:intergenic 30.0%
AAGTCCCACATTAAGAAATA+TGG + chr1_4:225789-225808 None:intergenic 30.0%
ATATTTCTTAATGTGGGACT+TGG - chr1_4:225788-225807 Msa0141660:intron 30.0%
TATTTCTTAATGTGGGACTT+GGG - chr1_4:225789-225808 Msa0141660:intron 30.0%
AATAATGAGCATGTAAGTAC+TGG - chr1_4:226002-226021 Msa0141660:intron 30.0%
AAAAGTTAGCTCAAGATGTA+AGG + chr1_4:226221-226240 None:intergenic 30.0%
! ACATCTTGAGCTAACTTTTT+AGG - chr1_4:226222-226241 Msa0141660:CDS 30.0%
!! CATTCTAAGACTTGGAATTT+GGG + chr1_4:226270-226289 None:intergenic 30.0%
!! ACATTCTAAGACTTGGAATT+TGG + chr1_4:226271-226290 None:intergenic 30.0%
!!! TTTTTTATCCTCATGCTCAT+GGG + chr1_4:226426-226445 None:intergenic 30.0%
!!! ATTTTTTATCCTCATGCTCA+TGG + chr1_4:226427-226446 None:intergenic 30.0%
ATGAGCATGAGGATAAAAAA+TGG - chr1_4:226426-226445 Msa0141660:CDS 30.0%
! GGATAAAAAATGGTACCTTT+TGG - chr1_4:226436-226455 Msa0141660:CDS 30.0%
! TTGGATTTTGAATACGCTTA+TGG + chr1_4:226573-226592 None:intergenic 30.0%
TCAAAATCCAAGTTCATTCA+TGG - chr1_4:226582-226601 Msa0141660:CDS 30.0%
! AGATCTAGAAGTTAATGGAT+TGG + chr1_4:226792-226811 None:intergenic 30.0%
TCTACAATAAGAGAAACTAC+AGG + chr1_4:226877-226896 None:intergenic 30.0%
GGATGTCATGAAAAAAACTA+TGG + chr1_4:227092-227111 None:intergenic 30.0%
! GACATGAAAAGTTTTCTCAT+TGG - chr1_4:227229-227248 Msa0141660:intron 30.0%
!! GAAATTGTAGGGTTTTATGT+TGG + chr1_4:227303-227322 None:intergenic 30.0%
AAAACCCTACAATTTCAACA+TGG - chr1_4:227307-227326 Msa0141660:intron 30.0%
CATACCATGTTGAAATTGTA+GGG + chr1_4:227314-227333 None:intergenic 30.0%
TCATACCATGTTGAAATTGT+AGG + chr1_4:227315-227334 None:intergenic 30.0%
AATAAAGACAGCAAAAGTTG+TGG + chr1_4:227350-227369 None:intergenic 30.0%
TTGTTGAGTTCCTTAAAATC+TGG - chr1_4:227373-227392 Msa0141660:intron 30.0%
! TCATAGAGTTCCAGATTTTA+AGG + chr1_4:227386-227405 None:intergenic 30.0%
! TCCTAATTGTAATTGCGTTT+TGG - chr1_4:227480-227499 Msa0141660:intron 30.0%
GACTTATGTCTGATGTTATT+TGG - chr1_4:227536-227555 Msa0141660:intron 30.0%
! TTACTGATTACTCTTTCATC+TGG - chr1_4:227656-227675 Msa0141660:intron 30.0%
! TTACTGATTATGCTTTCATC+TGG - chr1_4:227750-227769 Msa0141660:intron 30.0%
ACAAGTATGAGAAATTTCTC+TGG + chr1_4:227832-227851 None:intergenic 30.0%
!!! TATTTTTGAAACCCTTTTCC+TGG - chr1_4:228104-228123 Msa0141660:intron 30.0%
!! GAAATGATTTTGGTGATCTT+TGG - chr1_4:228344-228363 Msa0141660:CDS 30.0%
AACAAATAGGAAATGTGTAC+GGG + chr1_4:228538-228557 None:intergenic 30.0%
ATAAGCAGATATAACAAACC+AGG + chr1_4:228566-228585 None:intergenic 30.0%
GCTTAAGTGTTTGTATTGAA+AGG - chr1_4:228671-228690 Msa0141660:CDS 30.0%
TGTTCAATAGTTAGAGTTAG+AGG - chr1_4:228915-228934 Msa0141660:intron 30.0%
GTTCAATAGTTAGAGTTAGA+GGG - chr1_4:228916-228935 Msa0141660:intron 30.0%
AGATTGTAGATATGTGTGAA+TGG - chr1_4:229559-229578 Msa0141660:intron 30.0%
! ATATCATCTGGATTAGATGT+TGG + chr1_4:229929-229948 None:intergenic 30.0%
TAGGCAAATATTTACAAGGT+GGG + chr1_4:229984-230003 None:intergenic 30.0%
TTAGGCAAATATTTACAAGG+TGG + chr1_4:229985-230004 None:intergenic 30.0%
GTCTTAGGCAAATATTTACA+AGG + chr1_4:229988-230007 None:intergenic 30.0%
AATATTTGCCTAAGACGTAA+TGG - chr1_4:229992-230011 Msa0141660:intron 30.0%
!! GACAAATTTGATGATGAGAT+TGG + chr1_4:230114-230133 None:intergenic 30.0%
!! CATTTTGAGTATATGAACAC+TGG + chr1_4:230165-230184 None:intergenic 30.0%
TCTTGGTCAATTGTTTAAGT+GGG + chr1_4:230213-230232 None:intergenic 30.0%
TTCTTGGTCAATTGTTTAAG+TGG + chr1_4:230214-230233 None:intergenic 30.0%
! GAGGACATTTGTTAATTTCT+TGG + chr1_4:230230-230249 None:intergenic 30.0%
CTCACAAAGCAAATGTTAAA+AGG + chr1_4:230321-230340 None:intergenic 30.0%
!! TCTAGTTCCTTTTTCTAACT+AGG - chr1_4:230342-230361 Msa0141660:intron 30.0%
! CTAGTTCCTTTTTCTAACTA+GGG - chr1_4:230343-230362 Msa0141660:intron 30.0%
ATAGTTCCCTAGTTAGAAAA+AGG + chr1_4:230352-230371 None:intergenic 30.0%
! TTTTTCTAACTAGGGAACTA+TGG - chr1_4:230351-230370 Msa0141660:intron 30.0%
! TTTTTGTGTGAAAGATGCAA+GGG + chr1_4:230474-230493 None:intergenic 30.0%
! ATTTTTGTGTGAAAGATGCA+AGG + chr1_4:230475-230494 None:intergenic 30.0%
TTCTAAACATAAACACATCC+AGG - chr1_4:230556-230575 Msa0141660:intron 30.0%
TCTAAACATAAACACATCCA+GGG - chr1_4:230557-230576 Msa0141660:intron 30.0%
GAAATTTCAAATGTCTAACC+AGG + chr1_4:230625-230644 None:intergenic 30.0%
! GGTTAGACATTTGAAATTTC+TGG - chr1_4:230625-230644 Msa0141660:intron 30.0%
GAATGAGATGAATATAGACT+AGG + chr1_4:230670-230689 None:intergenic 30.0%
TCTTGAACAAATATAACCGA+GGG - chr1_4:231358-231377 Msa0141660:intron 30.0%
! AATATAACCGAGGGTATAAT+AGG - chr1_4:231367-231386 Msa0141660:intron 30.0%
TGAAATACCTATTATACCCT+CGG + chr1_4:231377-231396 None:intergenic 30.0%
ATTCTTGAGCTAAATTGTTC+TGG - chr1_4:231842-231861 Msa0141660:intron 30.0%
AAGTAATCCCCATAATTCTT+GGG + chr1_4:231918-231937 None:intergenic 30.0%
GATTAACTTTATACTTCTCG+TGG - chr1_4:232077-232096 Msa0141660:intron 30.0%
TTTAATGAAATGCGTGTTTG+AGG + chr1_4:232359-232378 None:intergenic 30.0%
TCAAACACGCATTTCATTAA+AGG - chr1_4:232358-232377 Msa0141660:intron 30.0%
ATCAATATACAGGGGATTAT+CGG + chr1_4:232407-232426 None:intergenic 30.0%
TATAGTAACAGAGCAATGTT+CGG + chr1_4:232529-232548 None:intergenic 30.0%
AGTTAAACCGTTGTATTAGT+GGG + chr1_4:232574-232593 None:intergenic 30.0%
TAGTTAAACCGTTGTATTAG+TGG + chr1_4:232575-232594 None:intergenic 30.0%
AAAAATTAGCTATCGAAGCT+AGG + chr1_4:232641-232660 None:intergenic 30.0%
CAGAGACATAAAAACTTCTT+TGG + chr1_4:232670-232689 None:intergenic 30.0%
TGGATATTACAAGTCTATCA+AGG + chr1_4:232933-232952 None:intergenic 30.0%
! ATTTGAAGGAGTGTAATGAT+AGG - chr1_4:232973-232992 Msa0141660:intron 30.0%
! AGGAGTAATAGTCTTTTAGA+GGG + chr1_4:233195-233214 None:intergenic 30.0%
! TAGGAGTAATAGTCTTTTAG+AGG + chr1_4:233196-233215 None:intergenic 30.0%
!! GATAATAAGAAGGGTACTAT+AGG + chr1_4:233433-233452 None:intergenic 30.0%
!!! GCTTATGTTTTAGAGAGAAT+TGG - chr1_4:233505-233524 Msa0141660:intron 30.0%
TGTATAGAAAACTGTAGCTA+TGG + chr1_4:233532-233551 None:intergenic 30.0%
! CGATTAATTTTATCCAGTTG+AGG + chr1_4:233574-233593 None:intergenic 30.0%
TAGAAAATGAATGGGAGAAT+AGG - chr1_4:233829-233848 Msa0141660:intron 30.0%
!!! AGAAAGGGGATAGTTTTAAT+AGG + chr1_4:233871-233890 None:intergenic 30.0%
AACAAGGAATAGAAAGAAAG+GGG + chr1_4:233885-233904 None:intergenic 30.0%
ATATCATCTTGTCTTGTCAA+AGG - chr1_4:233970-233989 Msa0141660:intron 30.0%
! TCCTTTCAGGTATTTCTTAA+AGG - chr1_4:234039-234058 Msa0141660:intron 30.0%
! ACCTTTAAGAAATACCTGAA+AGG + chr1_4:234043-234062 None:intergenic 30.0%
! CACTTTGAGCAAAATTTTGA+AGG - chr1_4:234182-234201 Msa0141660:intron 30.0%
! TGTTTAAAGTTTGTCCATTG+CGG - chr1_4:234613-234632 Msa0141660:CDS 30.0%
CATTAATATGCAACACGTTT+GGG + chr1_4:234895-234914 None:intergenic 30.0%
TCATTAATATGCAACACGTT+TGG + chr1_4:234896-234915 None:intergenic 30.0%
GTGTTGCATATTAATGATGT+GGG - chr1_4:234899-234918 Msa0141660:intron 30.0%
CGAAAAGTAGGAAAAAAATG+TGG - chr1_4:234988-235007 Msa0141660:intron 30.0%
ATTATTTGTTTGTATGAGCC+CGG - chr1_4:235137-235156 Msa0141660:intron 30.0%
! ACTCTAATTTGCAAATGAAC+CGG + chr1_4:235159-235178 None:intergenic 30.0%
!! TATCTTTCTGAGATTTGCTT+GGG - chr1_4:235178-235197 Msa0141660:intron 30.0%
ACCATACACATTTCTTTCAT+TGG - chr1_4:235397-235416 Msa0141660:intron 30.0%
ACCAATGAAAGAAATGTGTA+TGG + chr1_4:235401-235420 None:intergenic 30.0%
!! TTTCTTTCATTGGTTTAGCT+TGG - chr1_4:235407-235426 Msa0141660:intron 30.0%
CTGTACTAAATCATATGCAT+TGG - chr1_4:235466-235485 Msa0141660:intron 30.0%
! ATGCTAACTAGTTTGTGATA+CGG + chr1_4:235592-235611 None:intergenic 30.0%
AACAGGAAAGATGTGTAATT+TGG + chr1_4:235677-235696 None:intergenic 30.0%
!! AATTATTGGCTTGAAACAAC+AGG + chr1_4:235694-235713 None:intergenic 30.0%
AACCTCTTGTGTAAAAAACA+GGG - chr1_4:235883-235902 Msa0141660:intron 30.0%
! TTTTATATGAGGAGATGAAC+CGG + chr1_4:236100-236119 None:intergenic 30.0%
TCATCTCCTCATATAAAAAG+TGG - chr1_4:236102-236121 Msa0141660:intron 30.0%
!! ACTGTCAGTATTGGTATATA+AGG - chr1_4:236137-236156 Msa0141660:intron 30.0%
CTCTAGGCAAAAACATAAAT+AGG + chr1_4:236289-236308 None:intergenic 30.0%
CAGATGTAAAGTTAAACTCT+AGG + chr1_4:236305-236324 None:intergenic 30.0%
GAAATATTAATTCGGAAGTG+TGG - chr1_4:236609-236628 Msa0141660:CDS 30.0%
!! TTTTCTCAAGACAGTTTTAG+AGG - chr1_4:236674-236693 Msa0141660:CDS 30.0%
TAAGGTAATACTACCATTGT+AGG + chr1_4:236721-236740 None:intergenic 30.0%
TACAATGGTAGTATTACCTT+AGG - chr1_4:236720-236739 Msa0141660:CDS 30.0%
!! CTCTAAAATGTTAAGGGTTA+TGG - chr1_4:236833-236852 Msa0141660:CDS 30.0%
!!! AACAGATATTTTGTTTCTGG+GGG - chr1_4:236934-236953 Msa0141660:CDS 30.0%
! TATCAAGCTTTAGTTACTTG+TGG - chr1_4:237177-237196 Msa0141660:intron 30.0%
AAAAAAATTACGATGCCTGT+TGG - chr1_4:237303-237322 Msa0141660:intron 30.0%
GTTTCAGCAAAAAAAGAGAA+AGG - chr1_4:237548-237567 Msa0141660:intron 30.0%
TTCAGCAAAAAAAGAGAAAG+GGG - chr1_4:237550-237569 Msa0141660:intron 30.0%
AAACTGAACCAACTAAGTTT+AGG - chr1_4:237598-237617 Msa0141660:intron 30.0%
AGGATAAAGCTTCTAATGTA+CGG - chr1_4:237754-237773 Msa0141660:CDS 30.0%
!! CCTTTTGAACTTGTTTGATT+TGG + chr1_4:237790-237809 None:intergenic 30.0%
CCAAATCAAACAAGTTCAAA+AGG - chr1_4:237787-237806 Msa0141660:CDS 30.0%
AAATATATGGCACACTTCTA+TGG + chr1_4:237860-237879 None:intergenic 30.0%
ACCAACACAGCATAAATATA+TGG + chr1_4:237873-237892 None:intergenic 30.0%
TCTATTGCTGCTATATAAGT+AGG - chr1_4:237925-237944 Msa0141660:CDS 30.0%
CTATTGCTGCTATATAAGTA+GGG - chr1_4:237926-237945 Msa0141660:CDS 30.0%
AGTAGGGATATATCAAGTAA+AGG - chr1_4:237942-237961 Msa0141660:CDS 30.0%
CTTACTTCATGCATAACTTA+TGG - chr1_4:238024-238043 Msa0141660:CDS 30.0%
TTTATCTATACCATCAGTCA+GGG + chr1_4:238098-238117 None:intergenic 30.0%
ATTTATCTATACCATCAGTC+AGG + chr1_4:238099-238118 None:intergenic 30.0%
! GAAGGGTTTAAACGTTTTAG+GGG + chr1_4:222404-222423 None:intergenic 35.0%
! GTGAAGGGTTTAAACGTTTT+AGG + chr1_4:222406-222425 None:intergenic 35.0%
TGTGGAATGAAAGGAAACAA+CGG + chr1_4:222436-222455 None:intergenic 35.0%
! TTTGGTGATTGTGGAATGAA+AGG + chr1_4:222445-222464 None:intergenic 35.0%
! TTCTCTGATTGAAGAGGTTT+TGG + chr1_4:222463-222482 None:intergenic 35.0%
AGTGATTTCTCTGATTGAAG+AGG + chr1_4:222469-222488 None:intergenic 35.0%
GTGATCAAATATGTTGGAGT+TGG - chr1_4:223213-223232 Msa0141660:CDS 35.0%
AGCTAAATTCGGGATAATAG+TGG + chr1_4:223288-223307 None:intergenic 35.0%
AATCATCAGTTGAGAAAAGG+TGG - chr1_4:223370-223389 Msa0141660:intron 35.0%
AAGGTGGAATATAATGCAGT+TGG - chr1_4:223386-223405 Msa0141660:intron 35.0%
! AAGTGTTCATGCCACTTAAT+TGG - chr1_4:223614-223633 Msa0141660:intron 35.0%
ACAACAACCAACCAATTAAG+TGG + chr1_4:223628-223647 None:intergenic 35.0%
! TGCACTTCTGAAAGAACTTT+AGG + chr1_4:223915-223934 None:intergenic 35.0%
CTACAATGTTCTCTATCTCT+AGG + chr1_4:224031-224050 None:intergenic 35.0%
CAAAAATCACAGTATCCAGT+GGG + chr1_4:224091-224110 None:intergenic 35.0%
GTCCATTGCAAGTCTTAATA+TGG + chr1_4:224120-224139 None:intergenic 35.0%
! GCAATGGACTTACTTTATAC+TGG - chr1_4:224131-224150 Msa0141660:intron 35.0%
! ATCATAGGTTGACAAACTAG+AGG + chr1_4:224185-224204 None:intergenic 35.0%
! TCTAGTTTGTCAACCTATGA+TGG - chr1_4:224184-224203 Msa0141660:CDS 35.0%
! CTAGTTTGTCAACCTATGAT+GGG - chr1_4:224185-224204 Msa0141660:CDS 35.0%
CTGACAAAAGATGCTCATTT+GGG + chr1_4:224963-224982 None:intergenic 35.0%
ACTGACAAAAGATGCTCATT+TGG + chr1_4:224964-224983 None:intergenic 35.0%
!!! TCTGTTTTGTTTCATGAGCT+TGG - chr1_4:224988-225007 Msa0141660:intron 35.0%
TTTGTTTCATGAGCTTGGTA+TGG - chr1_4:224993-225012 Msa0141660:intron 35.0%
ATCGATTGTTAGATACTCGA+TGG - chr1_4:225095-225114 Msa0141660:CDS 35.0%
!! ATGTTTTGCTGTGCATGTTT+TGG - chr1_4:225193-225212 Msa0141660:intron 35.0%
! GGAAAGTATAATGAAGTCAG+CGG + chr1_4:225296-225315 None:intergenic 35.0%
GTGATAAGCATATAACCACT+TGG - chr1_4:225427-225446 Msa0141660:intron 35.0%
GATAAGCATATAACCACTTG+GGG - chr1_4:225429-225448 Msa0141660:intron 35.0%
!! TGATAGCTTGCTTATAATGG+AGG + chr1_4:225457-225476 None:intergenic 35.0%
!! CCTTGATAGCTTGCTTATAA+TGG + chr1_4:225460-225479 None:intergenic 35.0%
CCATTATAAGCAAGCTATCA+AGG - chr1_4:225457-225476 Msa0141660:intron 35.0%
TTATAAGCAAGCTATCAAGG+GGG - chr1_4:225460-225479 Msa0141660:intron 35.0%
TAGGGAACTTTGGTATTATG+GGG + chr1_4:225555-225574 None:intergenic 35.0%
GATAGGGAACTTTGGTATTA+TGG + chr1_4:225557-225576 None:intergenic 35.0%
TATCAATTGGTATCAAAGCC+AGG + chr1_4:225681-225700 None:intergenic 35.0%
! TGCTTGATGGAGTATTTAAG+TGG + chr1_4:225764-225783 None:intergenic 35.0%
AAGAAATATGGGATGCTTGA+TGG + chr1_4:225777-225796 None:intergenic 35.0%
GCATCCCATATTTCTTAATG+TGG - chr1_4:225781-225800 Msa0141660:intron 35.0%
!! CTCATTATTAGCCTTGCTAT+CGG + chr1_4:225991-226010 None:intergenic 35.0%
TCCACATTGATCTAGATGTT+TGG - chr1_4:226054-226073 Msa0141660:intron 35.0%
ACCAAACATCTAGATCAATG+TGG + chr1_4:226058-226077 None:intergenic 35.0%
CATTGATCTAGATGTTTGGT+AGG - chr1_4:226058-226077 Msa0141660:intron 35.0%
TTCCAAGTCTTAGAATGTGA+TGG - chr1_4:226273-226292 Msa0141660:CDS 35.0%
!! TTCCATCACATTCTAAGACT+TGG + chr1_4:226278-226297 None:intergenic 35.0%
!! CATTCTAAGACTCGGAATTT+GGG + chr1_4:226340-226359 None:intergenic 35.0%
!! ACATTCTAAGACTCGGAATT+TGG + chr1_4:226341-226360 None:intergenic 35.0%
!! TTCCATCACATTCTAAGACT+CGG + chr1_4:226278-226297 None:intergenic 35.0%
ACACATTTGATGGAACCAAA+AGG + chr1_4:226454-226473 None:intergenic 35.0%
!!! TTTTGGTTCCATCAAATGTG+TGG - chr1_4:226453-226472 Msa0141660:intron 35.0%
!! TGTTGATTCCACACATTTGA+TGG + chr1_4:226464-226483 None:intergenic 35.0%
GATGCACAGATATAACAGAA+TGG + chr1_4:226542-226561 None:intergenic 35.0%
! CAACTTTGGTAACTCTACAT+TGG - chr1_4:226607-226626 Msa0141660:CDS 35.0%
CAAACTTTATCCCACTAAGT+GGG - chr1_4:226704-226723 Msa0141660:intron 35.0%
TTCCCTTCACCTGTATTTAA+AGG - chr1_4:227147-227166 Msa0141660:intron 35.0%
TGCCTTTAAATACAGGTGAA+GGG + chr1_4:227152-227171 None:intergenic 35.0%
TTGCCTTTAAATACAGGTGA+AGG + chr1_4:227153-227172 None:intergenic 35.0%
ACGACTTTGCCTTTAAATAC+AGG + chr1_4:227159-227178 None:intergenic 35.0%
TATTTAAAGGCAAAGTCGTC+TGG - chr1_4:227160-227179 Msa0141660:intron 35.0%
ATTTAAAGGCAAAGTCGTCT+GGG - chr1_4:227161-227180 Msa0141660:intron 35.0%
! GTTTTATGTTGGGTTTGTGT+TGG + chr1_4:227292-227311 None:intergenic 35.0%
GCCAAAACGCAATTACAATT+AGG + chr1_4:227484-227503 None:intergenic 35.0%
GTAATGTACTGCTTCAAGAT+CGG + chr1_4:227907-227926 None:intergenic 35.0%
ATCTTGAAGCAGTACATTAC+TGG - chr1_4:227907-227926 Msa0141660:CDS 35.0%
TTCTTAAAGGACTTTGCAAG+AGG + chr1_4:227967-227986 None:intergenic 35.0%
! TCTTGCAAAGTCCTTTAAGA+AGG - chr1_4:227966-227985 Msa0141660:CDS 35.0%
!! TTTACGACTAGCCTTCTTAA+AGG + chr1_4:227980-227999 None:intergenic 35.0%
! TTTAAGAAGGCTAGTCGTAA+AGG - chr1_4:227979-227998 Msa0141660:intron 35.0%
CATTGGCAAAAAATACCTAC+CGG + chr1_4:228136-228155 None:intergenic 35.0%
AATAGAACTGTCAAGGTAGA+GGG + chr1_4:228164-228183 None:intergenic 35.0%
CTATCACAATAGAACTGTCA+AGG + chr1_4:228171-228190 None:intergenic 35.0%
!! AAGTATTGGAGAACATACGT+AGG - chr1_4:228193-228212 Msa0141660:intron 35.0%
!!! ATTACAATCTTTTGGAGCCT+TGG - chr1_4:228247-228266 Msa0141660:CDS 35.0%
!!! TTACAATCTTTTGGAGCCTT+GGG - chr1_4:228248-228267 Msa0141660:CDS 35.0%
!! CGTCAATCAACTATTGGTTT+GGG - chr1_4:228367-228386 Msa0141660:CDS 35.0%
! GCTACACAACCTATTTTCTT+CGG - chr1_4:228405-228424 Msa0141660:CDS 35.0%
! CCATTTTCACCGAAGAAAAT+AGG + chr1_4:228417-228436 None:intergenic 35.0%
! CCTATTTTCTTCGGTGAAAA+TGG - chr1_4:228414-228433 Msa0141660:CDS 35.0%
!! GGTAATGGATGCTCAAAATT+GGG + chr1_4:228450-228469 None:intergenic 35.0%
CAACATGCAAAAATGTGTGT+GGG + chr1_4:228471-228490 None:intergenic 35.0%
ACAACATGCAAAAATGTGTG+TGG + chr1_4:228472-228491 None:intergenic 35.0%
GAATCAAGAGAAATGTGCAA+AGG + chr1_4:228504-228523 None:intergenic 35.0%
! CAACTGATGAGTATTGCATT+AGG - chr1_4:228789-228808 Msa0141660:intron 35.0%
GCATTAGGTGAAACAAGATT+AGG - chr1_4:228804-228823 Msa0141660:intron 35.0%
! TGAAGTATTACAGAGAATGC+TGG - chr1_4:228830-228849 Msa0141660:intron 35.0%
! GAAGTATTACAGAGAATGCT+GGG - chr1_4:228831-228850 Msa0141660:intron 35.0%
AAGTATTACAGAGAATGCTG+GGG - chr1_4:228832-228851 Msa0141660:intron 35.0%
GCACTACAAAGGAAAATACA+AGG - chr1_4:228940-228959 Msa0141660:intron 35.0%
CAACTAACAGAATTGACTAG+TGG - chr1_4:228990-229009 Msa0141660:intron 35.0%
TAACAGAATTGACTAGTGGA+TGG - chr1_4:228994-229013 Msa0141660:intron 35.0%
!!! AAGGACATTTTTTCTTCCCT+TGG - chr1_4:229056-229075 Msa0141660:intron 35.0%
!!! AGGACATTTTTTCTTCCCTT+GGG - chr1_4:229057-229076 Msa0141660:intron 35.0%
TGGCTAAACACAAAACAGAA+GGG + chr1_4:229083-229102 None:intergenic 35.0%
AAGTTGGAATTAGTTAGGAG+TGG + chr1_4:229142-229161 None:intergenic 35.0%
TGAGGAAGTTGGAATTAGTT+AGG + chr1_4:229147-229166 None:intergenic 35.0%
CATTAATTCTCATCACGATG+AGG + chr1_4:229165-229184 None:intergenic 35.0%
TCGTGATGAGAATTAATGAG+TGG - chr1_4:229167-229186 Msa0141660:intron 35.0%
GGAATAGGGAAATTTCTTCT+TGG + chr1_4:229205-229224 None:intergenic 35.0%
AAATTTCCCTATTCCTCTCT+TGG - chr1_4:229210-229229 Msa0141660:intron 35.0%
TTAGATGTTGTGCGTCTAAA+CGG + chr1_4:229504-229523 None:intergenic 35.0%
CATCTAATCCAGATGATATG+TGG - chr1_4:229930-229949 Msa0141660:intron 35.0%
TCGATATACCACATATCATC+TGG + chr1_4:229941-229960 None:intergenic 35.0%
TTCTCATTCCATTACGTCTT+AGG + chr1_4:230003-230022 None:intergenic 35.0%
! ACAACATTTTGCTCTTCAAG+AGG - chr1_4:230051-230070 Msa0141660:intron 35.0%
! AATGTTTGAGTTTGAGCTCT+TGG + chr1_4:230136-230155 None:intergenic 35.0%
GCTACTAAAAGTAACGTCAA+AGG + chr1_4:230583-230602 None:intergenic 35.0%
AGATGAATATAGACTAGGGA+AGG + chr1_4:230665-230684 None:intergenic 35.0%
AGCCATATCTAGGTTGTTAT+TGG - chr1_4:230713-230732 Msa0141660:intron 35.0%
TGCCAATAACAACCTAGATA+TGG + chr1_4:230718-230737 None:intergenic 35.0%
!!! TCCCTCTTCATTTTTAGCTT+CGG + chr1_4:230957-230976 None:intergenic 35.0%
AAGCTAAAAATGAAGAGGGA+TGG - chr1_4:230957-230976 Msa0141660:intron 35.0%
ACCAAGCATTTATAGTAGCT+TGG - chr1_4:231139-231158 Msa0141660:intron 35.0%
ACCAAGCTACTATAAATGCT+TGG + chr1_4:231143-231162 None:intergenic 35.0%
GTCTTGAACAAATATAACCG+AGG - chr1_4:231357-231376 Msa0141660:intron 35.0%
TCCAAATAACACTGCAATTG+CGG + chr1_4:231539-231558 None:intergenic 35.0%
! TCTATTTCCATTTTGTGTGG+CGG - chr1_4:231618-231637 Msa0141660:intron 35.0%
CTTTCCAGTCAAAAAGTCAA+AGG - chr1_4:231868-231887 Msa0141660:intron 35.0%
GAAGTAATCCCCATAATTCT+TGG + chr1_4:231919-231938 None:intergenic 35.0%
! AAACATTTTCATGCATGGAG+AGG + chr1_4:232024-232043 None:intergenic 35.0%
CATGCATGAAAATGTTTCCA+CGG - chr1_4:232027-232046 Msa0141660:intron 35.0%
! TTGACTCGAATAAGATTCCA+AGG + chr1_4:232297-232316 None:intergenic 35.0%
TGTTACTATAACATTGCCTC+TGG - chr1_4:232539-232558 Msa0141660:intron 35.0%
TTTCTTGCCCACTAATACAA+CGG - chr1_4:232564-232583 Msa0141660:intron 35.0%
GATTGCACCCTATAAAAGAA+AGG + chr1_4:232613-232632 None:intergenic 35.0%
! TTTTTATGTCTCTGCTCAAG+AGG - chr1_4:232676-232695 Msa0141660:CDS 35.0%
TTTGAGCTTGTAGATTGTGA+AGG - chr1_4:232699-232718 Msa0141660:CDS 35.0%
TCCTTCAAATGAGCTCTTTA+GGG + chr1_4:232963-232982 None:intergenic 35.0%
AGTGTAATGATAGGAACCAT+TGG - chr1_4:232982-233001 Msa0141660:intron 35.0%
!! TCTTCTTGTTGGTTTGTGAT+AGG + chr1_4:233010-233029 None:intergenic 35.0%
! CAGATTGAGTTTTCTGTTCA+GGG + chr1_4:233167-233186 None:intergenic 35.0%
! ACAGATTGAGTTTTCTGTTC+AGG + chr1_4:233168-233187 None:intergenic 35.0%
AAGAGATAAGCCTACTTCTA+AGG - chr1_4:233230-233249 Msa0141660:intron 35.0%
AGAGATAAGCCTACTTCTAA+GGG - chr1_4:233231-233250 Msa0141660:intron 35.0%
AGAGTTTATCCCTTAGAAGT+AGG + chr1_4:233243-233262 None:intergenic 35.0%
!! AGGAGCATTAGTAAACTACA+GGG + chr1_4:233344-233363 None:intergenic 35.0%
AGAAGAGATAAGAAGACTAG+TGG + chr1_4:233382-233401 None:intergenic 35.0%
CTATAGGAAGACCAAAGATA+TGG + chr1_4:233417-233436 None:intergenic 35.0%
GGGAATGCTGATAATAAGAA+GGG + chr1_4:233442-233461 None:intergenic 35.0%
TGGGAATGCTGATAATAAGA+AGG + chr1_4:233443-233462 None:intergenic 35.0%
!! TCTCTAAAACATAAGCAGAC+AGG + chr1_4:233501-233520 None:intergenic 35.0%
! AATTTTATCCAGTTGAGGCT+TGG + chr1_4:233569-233588 None:intergenic 35.0%
! GCTGCTTTGTATATGATTGA+GGG - chr1_4:233643-233662 Msa0141660:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + chr1_4:233687-233706 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr1_4:233686-233705 Msa0141660:intron 35.0%
TGCATACAGTACACCAAAAA+TGG - chr1_4:233710-233729 Msa0141660:intron 35.0%
ATACAGTACACCAAAAATGG+TGG - chr1_4:233713-233732 Msa0141660:intron 35.0%
TACAGTACACCAAAAATGGT+GGG - chr1_4:233714-233733 Msa0141660:intron 35.0%
CAATCATATTCAAAAGGGCA+GGG + chr1_4:233787-233806 None:intergenic 35.0%
TCAATCATATTCAAAAGGGC+AGG + chr1_4:233788-233807 None:intergenic 35.0%
TGAATGGGAGAATAGGAAAT+AGG - chr1_4:233836-233855 Msa0141660:intron 35.0%
GAATGGGAGAATAGGAAATA+GGG - chr1_4:233837-233856 Msa0141660:intron 35.0%
! ATATTATGTGTCGATCTCCT+TGG - chr1_4:234452-234471 Msa0141660:intron 35.0%
! TATTATGTGTCGATCTCCTT+GGG - chr1_4:234453-234472 Msa0141660:intron 35.0%
! TAGTCTTTTTATGGTGTGAC+CGG - chr1_4:234541-234560 Msa0141660:intron 35.0%
! ACACATATGTTGTCTAAGGT+GGG - chr1_4:234582-234601 Msa0141660:intron 35.0%
AAAAATACCTAGATTCCGAC+CGG - chr1_4:234724-234743 Msa0141660:intron 35.0%
CGTGTTGCATATTAATGATG+TGG - chr1_4:234898-234917 Msa0141660:intron 35.0%
TATTAATGATGTGGGTAACG+CGG - chr1_4:234907-234926 Msa0141660:intron 35.0%
TTTGTGGAAAACCGAAAAGT+AGG - chr1_4:234976-234995 Msa0141660:intron 35.0%
TCACTGCATCAAATACATTC+AGG + chr1_4:235040-235059 None:intergenic 35.0%
! CTCTAATTTGCAAATGAACC+GGG + chr1_4:235158-235177 None:intergenic 35.0%
!! GTATCTTTCTGAGATTTGCT+TGG - chr1_4:235177-235196 Msa0141660:intron 35.0%
!! TCTGCAGATTAGTTTAGAAG+AGG - chr1_4:235302-235321 Msa0141660:intron 35.0%
TGGTGTGCTATGTATCATAT+TGG - chr1_4:235427-235446 Msa0141660:intron 35.0%
! ATATGCATTGGTACCATGTA+GGG - chr1_4:235478-235497 Msa0141660:intron 35.0%
GTATCACAAACTAGTTAGCA+TGG - chr1_4:235591-235610 Msa0141660:intron 35.0%
CAACCTCTTGTGTAAAAAAC+AGG - chr1_4:235882-235901 Msa0141660:intron 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG + chr1_4:235888-235907 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG - chr1_4:235888-235907 Msa0141660:intron 35.0%
! TCCTAATGATTTGCATTTCC+TGG - chr1_4:236016-236035 Msa0141660:intron 35.0%
TCCAGGAAATGCAAATCATT+AGG + chr1_4:236020-236039 None:intergenic 35.0%
!! CAGATAATGGGATATCTTTC+CGG - chr1_4:236078-236097 Msa0141660:intron 35.0%
!!! ACTGCTCCACTTTTTATATG+AGG + chr1_4:236111-236130 None:intergenic 35.0%
!!! CTTGGGCTTTTTTAAAGTGA+TGG - chr1_4:236336-236355 Msa0141660:intron 35.0%
TTTAAGTACACGTCATGCAT+GGG + chr1_4:236499-236518 None:intergenic 35.0%
ATTTAAGTACACGTCATGCA+TGG + chr1_4:236500-236519 None:intergenic 35.0%
ATAAGTACACCTACACAACA+TGG - chr1_4:236518-236537 Msa0141660:CDS 35.0%
AAAATCCATGTACTTCTCTG+GGG + chr1_4:236658-236677 None:intergenic 35.0%
GAAAATCCATGTACTTCTCT+GGG + chr1_4:236659-236678 None:intergenic 35.0%
AGAAAATCCATGTACTTCTC+TGG + chr1_4:236660-236679 None:intergenic 35.0%
! GTTAAGGGTTATGGCTTTTA+TGG - chr1_4:236842-236861 Msa0141660:CDS 35.0%
! TTTAGTTGACTCAATGACTC+AGG - chr1_4:237139-237158 Msa0141660:intron 35.0%
! CGCATTTTCTGTATCATTAG+CGG + chr1_4:237364-237383 None:intergenic 35.0%
AGCAATAAAATCATACCCCT+TGG + chr1_4:237403-237422 None:intergenic 35.0%
GACAATAGAATTCAGCTTCA+AGG + chr1_4:237460-237479 None:intergenic 35.0%
CTGAAACAAGTCTTTCTCTT+GGG + chr1_4:237535-237554 None:intergenic 35.0%
TCATTGCTCCTAAACTTAGT+TGG + chr1_4:237609-237628 None:intergenic 35.0%
ATTAGAATGCCTACTTCTCT+TGG + chr1_4:237646-237665 None:intergenic 35.0%
AAAGCTTCTAATGTACGGAT+AGG - chr1_4:237759-237778 Msa0141660:CDS 35.0%
CAAAAGGAAGTAATAGATGC+TGG - chr1_4:237803-237822 Msa0141660:CDS 35.0%
GCCATATATTTATGCTGTGT+TGG - chr1_4:237869-237888 Msa0141660:CDS 35.0%
GTTATTCATGTTGAGACTTG+TGG - chr1_4:238149-238168 Msa0141660:five_prime_UTR 35.0%
!! TGAAGAGGTTTTGGTGATTG+TGG + chr1_4:222454-222473 None:intergenic 40.0%
! TACCTTAGGGCGTTTATCAA+TGG + chr1_4:222971-222990 None:intergenic 40.0%
AATATGTTGGAGTTGGACAC+TGG - chr1_4:223220-223239 Msa0141660:CDS 40.0%
CACCAACACTTCTAATCGAA+GGG + chr1_4:223250-223269 None:intergenic 40.0%
TTAAGTGGCATGAACACTTC+AGG + chr1_4:223613-223632 None:intergenic 40.0%
! GTTCATGCCACTTAATTGGT+TGG - chr1_4:223618-223637 Msa0141660:intron 40.0%
!!! AGTCGCTCGAGAAGTTTTTT+AGG - chr1_4:223679-223698 Msa0141660:intron 40.0%
CTATGAAAGTAACTGCTTCG+AGG - chr1_4:223778-223797 Msa0141660:intron 40.0%
TTAGTACATGTAGGACTTCC+TGG + chr1_4:223848-223867 None:intergenic 40.0%
GCAAAAATCACAGTATCCAG+TGG + chr1_4:224092-224111 None:intergenic 40.0%
! TAGGTTGACAAACTAGAGGA+AGG + chr1_4:224181-224200 None:intergenic 40.0%
GCATCATACATACCCATCAT+AGG + chr1_4:224200-224219 None:intergenic 40.0%
ATGCCATAAAAAGTCCGTAC+AGG + chr1_4:224504-224523 None:intergenic 40.0%
TTAGGGCTTCTAACTTCTGA+GGG - chr1_4:224754-224773 Msa0141660:intron 40.0%
GTTCATGATGATAGTCAGCT+AGG - chr1_4:224868-224887 Msa0141660:intron 40.0%
TGATGATAGTCAGCTAGGTT+TGG - chr1_4:224873-224892 Msa0141660:intron 40.0%
AAGAAAACAGTGAGCCTAAG+AGG + chr1_4:225243-225262 None:intergenic 40.0%
! GATGGAGTATTTAAGTGGCT+TGG + chr1_4:225759-225778 None:intergenic 40.0%
! TCGTAATCTTTGTTGGTTGC+AGG - chr1_4:225900-225919 Msa0141660:intron 40.0%
! CGTAATCTTTGTTGGTTGCA+GGG - chr1_4:225901-225920 Msa0141660:intron 40.0%
! GTAATCTTTGTTGGTTGCAG+GGG - chr1_4:225902-225921 Msa0141660:intron 40.0%
TATCGGAAGTCTGAATCATC+AGG + chr1_4:225974-225993 None:intergenic 40.0%
TTCCGAGTCTTAGAATGTGA+TGG - chr1_4:226343-226362 Msa0141660:intron 40.0%
AGTTGAGCCATGAATGAACT+TGG + chr1_4:226592-226611 None:intergenic 40.0%
GTTCATTCATGGCTCAACTT+TGG - chr1_4:226593-226612 Msa0141660:CDS 40.0%
CCACTTAGTGGGATAAAGTT+TGG + chr1_4:226706-226725 None:intergenic 40.0%
CCAAACTTTATCCCACTAAG+TGG - chr1_4:226703-226722 Msa0141660:intron 40.0%
ATAAGAGAAACTACAGGCAG+AGG + chr1_4:226871-226890 None:intergenic 40.0%
GTGCCCTGAATAAAGTTTCT+TGG - chr1_4:227043-227062 Msa0141660:intron 40.0%
AAGACAGCAAAAGTTGTGGA+GGG + chr1_4:227346-227365 None:intergenic 40.0%
AAAGACAGCAAAAGTTGTGG+AGG + chr1_4:227347-227366 None:intergenic 40.0%
ACGAGAAGGAAAAATCATGG+AGG + chr1_4:227420-227439 None:intergenic 40.0%
CCAACGAGAAGGAAAAATCA+TGG + chr1_4:227423-227442 None:intergenic 40.0%
! CCATGATTTTTCCTTCTCGT+TGG - chr1_4:227420-227439 Msa0141660:intron 40.0%
AAAAACCAGGGTCAGACTAA+TGG + chr1_4:227446-227465 None:intergenic 40.0%
AAAGAGGGGACAAAAAACCA+GGG + chr1_4:227458-227477 None:intergenic 40.0%
AAAAGAGGGGACAAAAAACC+AGG + chr1_4:227459-227478 None:intergenic 40.0%
!! TTGTAATTGCGTTTTGGCCT+TGG - chr1_4:227486-227505 Msa0141660:intron 40.0%
TGCAACTAGGACAAAAACCA+AGG + chr1_4:227506-227525 None:intergenic 40.0%
GTCAAGACTAAACTGCAACT+AGG + chr1_4:227519-227538 None:intergenic 40.0%
! CTTGACTTTTGTCTCAGATG+TGG - chr1_4:227560-227579 Msa0141660:intron 40.0%
TTTGTCTCAGATGTGGTTTG+TGG - chr1_4:227567-227586 Msa0141660:intron 40.0%
ATGCAGCTTCAGAAATGCAT+TGG - chr1_4:227784-227803 Msa0141660:intron 40.0%
TGCAGCTTCAGAAATGCATT+GGG - chr1_4:227785-227804 Msa0141660:intron 40.0%
CTGTGTTCATCAAGAGAGAT+AGG + chr1_4:227856-227875 None:intergenic 40.0%
AGCATCACTTGCTTTCTACA+TGG - chr1_4:227930-227949 Msa0141660:CDS 40.0%
CAGCAGAGGAACATTATAAC+AGG + chr1_4:228057-228076 None:intergenic 40.0%
!!! TTTTGAAACCCTTTTCCTGG+AGG - chr1_4:228107-228126 Msa0141660:intron 40.0%
!!! CGGTAGGTATTTTTTGCCAA+TGG - chr1_4:228134-228153 Msa0141660:intron 40.0%
ATAGAACTGTCAAGGTAGAG+GGG + chr1_4:228163-228182 None:intergenic 40.0%
CAATAGAACTGTCAAGGTAG+AGG + chr1_4:228165-228184 None:intergenic 40.0%
ACAGATTGTGTCTCACACTA+GGG + chr1_4:228283-228302 None:intergenic 40.0%
TACAGATTGTGTCTCACACT+AGG + chr1_4:228284-228303 None:intergenic 40.0%
TAGTGTGAGACACAATCTGT+AGG - chr1_4:228283-228302 Msa0141660:CDS 40.0%
GGATTTCAGTTGTTGCACAT+TGG - chr1_4:228314-228333 Msa0141660:CDS 40.0%
CTTTGGCGTCAATCAACTAT+TGG - chr1_4:228361-228380 Msa0141660:CDS 40.0%
! GCGTCAATCAACTATTGGTT+TGG - chr1_4:228366-228385 Msa0141660:CDS 40.0%
AAATAGGTTGTGTAGCAACC+AGG + chr1_4:228401-228420 None:intergenic 40.0%
TCGGTGAAAATGGAAAACCT+TGG - chr1_4:228424-228443 Msa0141660:CDS 40.0%
!! GGGTAATGGATGCTCAAAAT+TGG + chr1_4:228451-228470 None:intergenic 40.0%
GCAAAAATGTGTGTGGGTAA+TGG + chr1_4:228465-228484 None:intergenic 40.0%
AGAGAAATGTGCAAAGGAGA+GGG + chr1_4:228498-228517 None:intergenic 40.0%
AAGAGAAATGTGCAAAGGAG+AGG + chr1_4:228499-228518 None:intergenic 40.0%
CAGTAGGGATAGTACTTGAT+GGG - chr1_4:228887-228906 Msa0141660:intron 40.0%
AGTAGGGATAGTACTTGATG+GGG - chr1_4:228888-228907 Msa0141660:intron 40.0%
ATGTCCTTGTGACAGTATTG+TGG + chr1_4:229044-229063 None:intergenic 40.0%
GTGGCTAAACACAAAACAGA+AGG + chr1_4:229084-229103 None:intergenic 40.0%
! TCTGTTTTGTGTTTAGCCAC+TGG - chr1_4:229084-229103 Msa0141660:intron 40.0%
CAAACATGAAACAACACCAG+TGG + chr1_4:229103-229122 None:intergenic 40.0%
CAAACAAGGTGTGCTTGTAT+AGG + chr1_4:229590-229609 None:intergenic 40.0%
!! CATAACCTACTCTGAGACAA+TGG + chr1_4:229855-229874 None:intergenic 40.0%
! CCTATCTGAAGCACAAAAAC+AGG + chr1_4:229887-229906 None:intergenic 40.0%
!!! CCTGTTTTTGTGCTTCAGAT+AGG - chr1_4:229884-229903 Msa0141660:intron 40.0%
! GTGGGAAGAAAAGAGTCTTT+TGG + chr1_4:229966-229985 None:intergenic 40.0%
GATGTGCAAGTTACTGAGAA+TGG + chr1_4:230082-230101 None:intergenic 40.0%
AAGTGGGACTATGTTCATCA+TGG + chr1_4:230197-230216 None:intergenic 40.0%
GATAGAGCGAGCTGAATATA+TGG + chr1_4:230292-230311 None:intergenic 40.0%
ACTAGGGAACTATGGTAACT+TGG - chr1_4:230359-230378 Msa0141660:intron 40.0%
CAGAGGCAATGTCTTAAAGA+AGG + chr1_4:230514-230533 None:intergenic 40.0%
AGACATTGCCTCTGCTATAT+TGG - chr1_4:230520-230539 Msa0141660:intron 40.0%
GACATTGCCTCTGCTATATT+GGG - chr1_4:230521-230540 Msa0141660:intron 40.0%
! GAAGTATCCCAATATAGCAG+AGG + chr1_4:230531-230550 None:intergenic 40.0%
CTGCTATATTGGGATACTTC+TGG - chr1_4:230531-230550 Msa0141660:intron 40.0%
TGAATATAGACTAGGGAAGG+AGG + chr1_4:230662-230681 None:intergenic 40.0%
TCCATTCATGAGCCATATCT+AGG - chr1_4:230703-230722 Msa0141660:intron 40.0%
ACCTAGATATGGCTCATGAA+TGG + chr1_4:230707-230726 None:intergenic 40.0%
!!! GTTCTCGACATTTTTTGCCT+CGG + chr1_4:230825-230844 None:intergenic 40.0%
GAGGCAAAAAATGTCGAGAA+CGG - chr1_4:230824-230843 Msa0141660:intron 40.0%
GCCGAAGCTAAAAATGAAGA+GGG - chr1_4:230953-230972 Msa0141660:intron 40.0%
ATATAGCAACCTGCTATAGC+AGG + chr1_4:231172-231191 None:intergenic 40.0%
TGCTATAGCAGGTTGCTATA+TGG - chr1_4:231171-231190 Msa0141660:intron 40.0%
CCAAATAACACTGCAATTGC+GGG + chr1_4:231538-231557 None:intergenic 40.0%
TATGTTTCCGCCACACAAAA+TGG + chr1_4:231628-231647 None:intergenic 40.0%
! TGTGGCGGAAACATAGTAAA+AGG - chr1_4:231633-231652 Msa0141660:intron 40.0%
!! CTGACCTTTGACTTTTTGAC+TGG + chr1_4:231875-231894 None:intergenic 40.0%
! CGTGGAAACATTTTCATGCA+TGG + chr1_4:232029-232048 None:intergenic 40.0%
! ATTCTGCCTCCTCCTTTTTA+GGG + chr1_4:232193-232212 None:intergenic 40.0%
GCAGCTTTCTTTGAATAAGC+AGG + chr1_4:232257-232276 None:intergenic 40.0%
TTCCAAGGCCTTCATATTTC+TGG + chr1_4:232282-232301 None:intergenic 40.0%
AATGAAATGCGTGTTTGAGG+AGG + chr1_4:232356-232375 None:intergenic 40.0%
! ATGAGACGGGATTTTCTCAA+AGG - chr1_4:232769-232788 Msa0141660:CDS 40.0%
TAAAAGATTAATTGCGCCGG+TGG - chr1_4:232812-232831 Msa0141660:intron 40.0%
ACCCTAAAGAGCTCATTTGA+AGG - chr1_4:232959-232978 Msa0141660:intron 40.0%
CTCCTTCAAATGAGCTCTTT+AGG + chr1_4:232964-232983 None:intergenic 40.0%
! TGGTTTGTGATAGGATCCAA+TGG + chr1_4:233001-233020 None:intergenic 40.0%
CGTCTGTTTCATCTTCTTGT+TGG + chr1_4:233021-233040 None:intergenic 40.0%
!! GAGGAGCATTAGTAAACTAC+AGG + chr1_4:233345-233364 None:intergenic 40.0%
TTCCCATCATGTAATCAGAG+AGG - chr1_4:233457-233476 Msa0141660:intron 40.0%
! GGCTGCTTTGTATATGATTG+AGG - chr1_4:233642-233661 Msa0141660:intron 40.0%
ATGATTGAGGGTTCAAGTCT+TGG - chr1_4:233655-233674 Msa0141660:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - chr1_4:233680-233699 Msa0141660:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - chr1_4:233681-233700 Msa0141660:intron 40.0%
ACAGTACACCAAAAATGGTG+GGG - chr1_4:233715-233734 Msa0141660:intron 40.0%
GAATAGGAAATAGGGAAACC+TGG - chr1_4:233845-233864 Msa0141660:intron 40.0%
CCTGAAGAATAAGAAGACTC+TGG + chr1_4:233935-233954 None:intergenic 40.0%
CCAGAGTCTTCTTATTCTTC+AGG - chr1_4:233932-233951 Msa0141660:intron 40.0%
ATTCTTCAGGTGCTCGATAT+TGG - chr1_4:233945-233964 Msa0141660:intron 40.0%
! ATATGTCTCAGTGCTGTTAC+TGG - chr1_4:234248-234267 Msa0141660:intron 40.0%
CTAAGAGAAGCAACATCAGT+TGG + chr1_4:234346-234365 None:intergenic 40.0%
! ATGTTGCTTCTCTTAGAAGC+CGG - chr1_4:234350-234369 Msa0141660:intron 40.0%
GGTCACACATATGTTGTCTA+AGG - chr1_4:234578-234597 Msa0141660:intron 40.0%
CACACATATGTTGTCTAAGG+TGG - chr1_4:234581-234600 Msa0141660:intron 40.0%
CAGTGTGTTTAATTCCGCAA+TGG + chr1_4:234630-234649 None:intergenic 40.0%
AAGTTGCTATCATGCTAGAC+CGG + chr1_4:234746-234765 None:intergenic 40.0%
TGTAATTAGACTTGAGCCGT+AGG - chr1_4:234798-234817 Msa0141660:intron 40.0%
! CTTCTGCTATTGACTACCTA+CGG + chr1_4:234817-234836 None:intergenic 40.0%
AGGTAGTCAATAGCAGAAGA+TGG - chr1_4:234818-234837 Msa0141660:intron 40.0%
TCCACAAAAAACCATTGCTG+CGG + chr1_4:234964-234983 None:intergenic 40.0%
AAAATGTGGGTCAAGTCAAG+TGG - chr1_4:235002-235021 Msa0141660:intron 40.0%
! CATATGCATTGGTACCATGT+AGG - chr1_4:235477-235496 Msa0141660:intron 40.0%
TTGAGAGACTTATCCTGTGT+TGG - chr1_4:235556-235575 Msa0141660:intron 40.0%
AGTTTGTGATACGGTTCAGT+AGG + chr1_4:235583-235602 None:intergenic 40.0%
AACTTCACACTATGTGTGCT+TGG - chr1_4:235727-235746 Msa0141660:CDS 40.0%
! TTACACAAGAGGTTGTTTCC+AGG + chr1_4:235877-235896 None:intergenic 40.0%
GTGCAATGCACCAAAATTGT+GGG - chr1_4:235915-235934 Msa0141660:intron 40.0%
GCAGCAACGATAAAAGAGAA+GGG + chr1_4:236197-236216 None:intergenic 40.0%
TGCAGCAACGATAAAAGAGA+AGG + chr1_4:236198-236217 None:intergenic 40.0%
! TTGTGTCTGAAATCATCCGT+TGG - chr1_4:236404-236423 Msa0141660:intron 40.0%
ACATGGACTCTTGTCTATAC+TGG - chr1_4:236535-236554 Msa0141660:CDS 40.0%
CCATCACATATAGCTAGACT+CGG + chr1_4:236752-236771 None:intergenic 40.0%
! GTCAGCAACATTCATGCTTT+TGG + chr1_4:236783-236802 None:intergenic 40.0%
AAAGCATGAATGTTGCTGAC+AGG - chr1_4:236783-236802 Msa0141660:CDS 40.0%
AAGCATGAATGTTGCTGACA+GGG - chr1_4:236784-236803 Msa0141660:CDS 40.0%
!! TTCTGGGGGAATTTTAACAG+AGG - chr1_4:236948-236967 Msa0141660:intron 40.0%
TAGTTGCTATCCATCAGGTT+CGG - chr1_4:236973-236992 Msa0141660:intron 40.0%
TCTTGGGTGTTCGAAATATC+AGG + chr1_4:237519-237538 None:intergenic 40.0%
GCTGAAACAAGTCTTTCTCT+TGG + chr1_4:237536-237555 None:intergenic 40.0%
! AAGGTCAGAAGGAAGTATGA+AGG - chr1_4:237683-237702 Msa0141660:CDS 40.0%
! AGGTCAGAAGGAAGTATGAA+GGG - chr1_4:237684-237703 Msa0141660:CDS 40.0%
GTATGAAGGGCAATAAAAGC+CGG - chr1_4:237697-237716 Msa0141660:CDS 40.0%
! CGTGAGTGAAACTTTTGAAC+CGG + chr1_4:237719-237738 None:intergenic 40.0%
CGGTTCAAAAGTTTCACTCA+CGG - chr1_4:237717-237736 Msa0141660:CDS 40.0%
AAAAGTTTCACTCACGGTGA+TGG - chr1_4:237723-237742 Msa0141660:CDS 40.0%
AAAGTTTCACTCACGGTGAT+GGG - chr1_4:237724-237743 Msa0141660:CDS 40.0%
! AATGCTTTGTTCAGCAGGAA+AGG + chr1_4:237992-238011 None:intergenic 40.0%
! TCTGTAATGCTTTGTTCAGC+AGG + chr1_4:237997-238016 None:intergenic 40.0%
CTTCATGCATAACTTATGGG+AGG - chr1_4:238028-238047 Msa0141660:CDS 40.0%
ACTTATGGGAGGAATTCAAG+AGG - chr1_4:238039-238058 Msa0141660:CDS 40.0%
CGTTTAAACCCTTCACCACT+CGG - chr1_4:222410-222429 Msa0141660:three_prime_UTR 45.0%
!! TGTTTCTAGCTTGAGAGCTG+CGG - chr1_4:222858-222877 Msa0141660:CDS 45.0%
! AAGTGTGTTGGGGTTTTGCT+AGG - chr1_4:222883-222902 Msa0141660:CDS 45.0%
! AGTGTGTTGGGGTTTTGCTA+GGG - chr1_4:222884-222903 Msa0141660:CDS 45.0%
! TTTGCTAGGGTTTTGCGACA+TGG - chr1_4:222897-222916 Msa0141660:CDS 45.0%
! GTTTTGCGACATGGAGGATT+GGG - chr1_4:222906-222925 Msa0141660:CDS 45.0%
CTCCATTGATAAACGCCCTA+AGG - chr1_4:222966-222985 Msa0141660:CDS 45.0%
GTTAGTATCCGTGTCGTGTA+CGG + chr1_4:223150-223169 None:intergenic 45.0%
! CACCCTTCGATTAGAAGTGT+TGG - chr1_4:223245-223264 Msa0141660:CDS 45.0%
GCACCAACACTTCTAATCGA+AGG + chr1_4:223251-223270 None:intergenic 45.0%
!! TAGAAGTGTTGGTGCTACAG+AGG - chr1_4:223256-223275 Msa0141660:CDS 45.0%
! GCTAGCTTCCTTGATAACAG+TGG + chr1_4:223718-223737 None:intergenic 45.0%
TTTGGGTGATAAGAACCCAC+TGG - chr1_4:224073-224092 Msa0141660:intron 45.0%
ATACTGGACAACCAAGCTTG+TGG - chr1_4:224147-224166 Msa0141660:CDS 45.0%
TACTGGACAACCAAGCTTGT+GGG - chr1_4:224148-224167 Msa0141660:CDS 45.0%
TCCATGTGCTTGTCATGCAT+TGG - chr1_4:224445-224464 Msa0141660:CDS 45.0%
TCCAATGCATGACAAGCACA+TGG + chr1_4:224449-224468 None:intergenic 45.0%
TGTGCTTGTCATGCATTGGA+TGG - chr1_4:224449-224468 Msa0141660:CDS 45.0%
! CAGCCTGTACGGACTTTTTA+TGG - chr1_4:224498-224517 Msa0141660:CDS 45.0%
CTTAGGGCTTCTAACTTCTG+AGG - chr1_4:224753-224772 Msa0141660:intron 45.0%
! GATGTGCTCAAGCATCGTAT+TGG - chr1_4:224811-224830 Msa0141660:intron 45.0%
GATAGTCAGCTAGGTTTGGA+AGG - chr1_4:224877-224896 Msa0141660:intron 45.0%
! TATAATGGAGGTTCCCCAAG+TGG + chr1_4:225445-225464 None:intergenic 45.0%
TATGGGTATGGGATACTCGA+TGG + chr1_4:225509-225528 None:intergenic 45.0%
ACATCGAGTGGTATGGGTAT+GGG + chr1_4:225520-225539 None:intergenic 45.0%
ATACCCATACCACTCGATGT+GGG - chr1_4:225520-225539 Msa0141660:intron 45.0%
! GGTGCTATGATAGGGAACTT+TGG + chr1_4:225565-225584 None:intergenic 45.0%
!! TAATGGGCGGTGCTATGATA+GGG + chr1_4:225573-225592 None:intergenic 45.0%
TATCAAAGCCAGGTTGTCGA+TGG + chr1_4:225671-225690 None:intergenic 45.0%
GATTCAGACTTCCGATAGCA+AGG - chr1_4:225977-225996 Msa0141660:intron 45.0%
TTGAACTACCCATGAGCATG+AGG - chr1_4:226415-226434 Msa0141660:CDS 45.0%
TTATCCCACTAAGTGGGATC+AGG - chr1_4:226710-226729 Msa0141660:intron 45.0%
AGATCCTGATCCCACTTAGT+GGG + chr1_4:226717-226736 None:intergenic 45.0%
! TGGGTTAGATGCCTGTTGAA+AGG - chr1_4:227249-227268 Msa0141660:intron 45.0%
AATTCCCAAGGCCTTTCAAC+AGG + chr1_4:227263-227282 None:intergenic 45.0%
TGTTGAAAGGCCTTGGGAAT+TGG - chr1_4:227262-227281 Msa0141660:intron 45.0%
GTTGAAAGGCCTTGGGAATT+GGG - chr1_4:227263-227282 Msa0141660:intron 45.0%
TGTTGGTATCCCAATTCCCA+AGG + chr1_4:227275-227294 None:intergenic 45.0%
! CTCAGATGTGGTTTGTGGTT+TGG - chr1_4:227572-227591 Msa0141660:intron 45.0%
CTCTGGTCCCATAGCAAAAA+CGG + chr1_4:227815-227834 None:intergenic 45.0%
AGGTGCAGACATATTCAAGC+AGG - chr1_4:228213-228232 Msa0141660:intron 45.0%
CACAATCTGTAGGATCGTGT+AGG - chr1_4:228293-228312 Msa0141660:CDS 45.0%
!!! TTGGTTTGGGTTTTGTGACC+TGG - chr1_4:228380-228399 Msa0141660:CDS 45.0%
TGCTGGGGTAACACTTATTG+TGG - chr1_4:228847-228866 Msa0141660:intron 45.0%
GCTGGGGTAACACTTATTGT+GGG - chr1_4:228848-228867 Msa0141660:intron 45.0%
AAACCCAGAAAAGCAGCAGT+AGG - chr1_4:228871-228890 Msa0141660:intron 45.0%
AACCCAGAAAAGCAGCAGTA+GGG - chr1_4:228872-228891 Msa0141660:intron 45.0%
!!! ATCCCTACTGCTGCTTTTCT+GGG + chr1_4:228877-228896 None:intergenic 45.0%
!!! TATCCCTACTGCTGCTTTTC+TGG + chr1_4:228878-228897 None:intergenic 45.0%
GCAGTAGGGATAGTACTTGA+TGG - chr1_4:228886-228905 Msa0141660:intron 45.0%
GTAGGGATAGTACTTGATGG+GGG - chr1_4:228889-228908 Msa0141660:intron 45.0%
TAGGGATAGTACTTGATGGG+GGG - chr1_4:228890-228909 Msa0141660:intron 45.0%
! AGTTAGAGGGTGCACTACAA+AGG - chr1_4:228929-228948 Msa0141660:intron 45.0%
! CAGAATTGACTAGTGGATGG+TGG - chr1_4:228997-229016 Msa0141660:intron 45.0%
CACTCCACAATACTGTCACA+AGG - chr1_4:229037-229056 Msa0141660:intron 45.0%
TCTCATCACGATGAGGAAGT+TGG + chr1_4:229158-229177 None:intergenic 45.0%
GAGAATTAATGAGTGGTCGC+AGG - chr1_4:229174-229193 Msa0141660:intron 45.0%
CAGTTGCCAAGAGAGGAATA+GGG + chr1_4:229219-229238 None:intergenic 45.0%
CTCCAACATTTCCAGTGCAT+GGG + chr1_4:230266-230285 None:intergenic 45.0%
AGGGAACTATGGTAACTTGG+AGG - chr1_4:230362-230381 Msa0141660:intron 45.0%
GTAACTTGGAGGCTTCAACT+GGG - chr1_4:230373-230392 Msa0141660:intron 45.0%
TAACTTGGAGGCTTCAACTG+GGG - chr1_4:230374-230393 Msa0141660:intron 45.0%
AAAAGTAACGTCAAAGGCCC+TGG + chr1_4:230577-230596 None:intergenic 45.0%
! CTTTTAGTAGCACCAGTTGC+AGG - chr1_4:230592-230611 Msa0141660:intron 45.0%
!! CTCAACTGGTTTGGTTGCAA+AGG + chr1_4:230748-230767 None:intergenic 45.0%
CTTTGCAACCAAACCAGTTG+AGG - chr1_4:230746-230765 Msa0141660:intron 45.0%
CCTCGGTTTCTACTCAATGA+TGG + chr1_4:230808-230827 None:intergenic 45.0%
CCATCATTGAGTAGAAACCG+AGG - chr1_4:230805-230824 Msa0141660:intron 45.0%
GCAAAAAATGTCGAGAACGG+AGG - chr1_4:230827-230846 Msa0141660:intron 45.0%
! ACTGAGAAGAGCACAGAACT+TGG - chr1_4:230885-230904 Msa0141660:intron 45.0%
TCTATTACGGGAGACAGCAA+AGG + chr1_4:230929-230948 None:intergenic 45.0%
AGCTTCGGCGACTTCTATTA+CGG + chr1_4:230942-230961 None:intergenic 45.0%
CGCCGAAGCTAAAAATGAAG+AGG - chr1_4:230952-230971 Msa0141660:intron 45.0%
TGCAGCAGCTAAAGGAGTTA+GGG + chr1_4:231402-231421 None:intergenic 45.0%
TTGCAGCAGCTAAAGGAGTT+AGG + chr1_4:231403-231422 None:intergenic 45.0%
!! GCTGTTTTCGCTGCAATTTG+TGG - chr1_4:231426-231445 Msa0141660:intron 45.0%
AATGATGCGACAATGAACGC+TGG + chr1_4:231485-231504 None:intergenic 45.0%
TCAGTATCGCGAAGCACAAT+TGG + chr1_4:231510-231529 None:intergenic 45.0%
! CCCGCAATTGCAGTGTTATT+TGG - chr1_4:231535-231554 Msa0141660:intron 45.0%
AAAGGTCAGTCAAGATCTGC+TGG - chr1_4:231886-231905 Msa0141660:intron 45.0%
TGGTTCGTGCCCAAGAATTA+TGG - chr1_4:231906-231925 Msa0141660:intron 45.0%
GGTTCGTGCCCAAGAATTAT+GGG - chr1_4:231907-231926 Msa0141660:intron 45.0%
GTTCGTGCCCAAGAATTATG+GGG - chr1_4:231908-231927 Msa0141660:intron 45.0%
GTTGCATGACGACAAAAGCT+GGG + chr1_4:231941-231960 None:intergenic 45.0%
AGTTGCATGACGACAAAAGC+TGG + chr1_4:231942-231961 None:intergenic 45.0%
AAATGTTTCCACGGCACTAC+AGG - chr1_4:232036-232055 Msa0141660:intron 45.0%
AGCTGCACTTAGCCCTAAAA+AGG - chr1_4:232178-232197 Msa0141660:intron 45.0%
TGCACTTAGCCCTAAAAAGG+AGG - chr1_4:232181-232200 Msa0141660:intron 45.0%
ACTTAGCCCTAAAAAGGAGG+AGG - chr1_4:232184-232203 Msa0141660:intron 45.0%
! CATTCTGCCTCCTCCTTTTT+AGG + chr1_4:232194-232213 None:intergenic 45.0%
AGCTGCCACCAGAAATATGA+AGG - chr1_4:232271-232290 Msa0141660:intron 45.0%
!! CAAGGCCTTCATATTTCTGG+TGG + chr1_4:232279-232298 None:intergenic 45.0%
CACCAGAAATATGAAGGCCT+TGG - chr1_4:232277-232296 Msa0141660:intron 45.0%
GACTAGTAACAGCAGTGTGT+TGG - chr1_4:232731-232750 Msa0141660:CDS 45.0%
CATTGAGCCAAGTGATGAGA+CGG - chr1_4:232755-232774 Msa0141660:CDS 45.0%
ATTGAGCCAAGTGATGAGAC+GGG - chr1_4:232756-232775 Msa0141660:CDS 45.0%
GAAAATCCCGTCTCATCACT+TGG + chr1_4:232765-232784 None:intergenic 45.0%
GATTCCTCTCTGAGTTGTGT+CGG + chr1_4:233135-233154 None:intergenic 45.0%
AGTGGCTGAAGTTACTAGTG+AGG + chr1_4:233364-233383 None:intergenic 45.0%
GGCCTCTCTGATTACATGAT+GGG + chr1_4:233462-233481 None:intergenic 45.0%
ACAGGTCTAAGCACGTGAAT+GGG + chr1_4:233483-233502 None:intergenic 45.0%
AACAACAACCAAGCCTCAAC+TGG - chr1_4:233558-233577 Msa0141660:intron 45.0%
!!! GGGGATAGTTTTAATAGGCC+AGG + chr1_4:233866-233885 None:intergenic 45.0%
AGAGAAGCAACATCAGTTGG+AGG + chr1_4:234343-234362 None:intergenic 45.0%
TGACCTTTGTTCTGTACGTC+CGG + chr1_4:234563-234582 None:intergenic 45.0%
CTTTCGTGCAAAGCTGAAAC+TGG + chr1_4:234672-234691 None:intergenic 45.0%
TCAAGTCAAGTGGAGCAACT+TGG - chr1_4:235012-235031 Msa0141660:intron 45.0%
!! GAAATTGTGCTGTTTGCCTC+TGG - chr1_4:235074-235093 Msa0141660:intron 45.0%
CAATTTCACAGTTCAGCCAG+AGG + chr1_4:235093-235112 None:intergenic 45.0%
!! CTTTCTGAGATTTGCTTGGG+AGG - chr1_4:235181-235200 Msa0141660:intron 45.0%
AGAAGAGGATGTGAACTCGA+AGG - chr1_4:235317-235336 Msa0141660:intron 45.0%
CATTGGTACCATGTAGGGAA+AGG - chr1_4:235483-235502 Msa0141660:intron 45.0%
AGCTTCATCCTTTCCCTACA+TGG + chr1_4:235494-235513 None:intergenic 45.0%
TGTAGGGAAAGGATGAAGCT+AGG - chr1_4:235494-235513 Msa0141660:intron 45.0%
GTTGTTGTCACGTGACTGAA+AGG - chr1_4:235837-235856 Msa0141660:intron 45.0%
CGTGCAATGCACCAAAATTG+TGG - chr1_4:235914-235933 Msa0141660:intron 45.0%
! GTTCGGGAATCCCACAATTT+TGG + chr1_4:235928-235947 None:intergenic 45.0%
AGTGTCTGCACTGTCAGTAT+TGG - chr1_4:236128-236147 Msa0141660:intron 45.0%
AAAAGAGAAGGGACGAGATC+AGG + chr1_4:236186-236205 None:intergenic 45.0%
ACATCTGTAACAGGCTGTCT+TGG - chr1_4:236318-236337 Msa0141660:intron 45.0%
CATCTGTAACAGGCTGTCTT+GGG - chr1_4:236319-236338 Msa0141660:intron 45.0%
GTCTTGAAACAGACGACCAA+CGG + chr1_4:236423-236442 None:intergenic 45.0%
GACAAGAGTCCATGTTGTGT+AGG + chr1_4:236530-236549 None:intergenic 45.0%
CTAGACTCGGACTAAACCTA+AGG + chr1_4:236739-236758 None:intergenic 45.0%
CCGAGTCTAGCTATATGTGA+TGG - chr1_4:236749-236768 Msa0141660:CDS 45.0%
AGCATGAATGTTGCTGACAG+GGG - chr1_4:236785-236804 Msa0141660:CDS 45.0%
AGGTGTAGTTGCTATCCATC+AGG - chr1_4:236968-236987 Msa0141660:intron 45.0%
AGCTTTCATACCGAACCTGA+TGG + chr1_4:236986-237005 None:intergenic 45.0%
TCTATCCGTCACTCCTTTGT+AGG - chr1_4:237478-237497 Msa0141660:intron 45.0%
TCAGATCAGCCAAGAGAAGT+AGG - chr1_4:237634-237653 Msa0141660:CDS 45.0%
!!! TATTATTTTTTTAAATTCTT+TGG - chr1_4:225051-225070 Msa0141660:CDS 5.0%
ATTCGGAGGACAGATTGGAG+CGG + chr1_4:222627-222646 None:intergenic 50.0%
GTCCTCGCTTGCTTCCTTTA+TGG - chr1_4:222729-222748 Msa0141660:three_prime_UTR 50.0%
TGCCATAAAGGAAGCAAGCG+AGG + chr1_4:222734-222753 None:intergenic 50.0%
TATCTCTACGGAGAAGGCGA+GGG - chr1_4:222783-222802 Msa0141660:exon 50.0%
GGAGATTGTGGGGATGTTGT+TGG - chr1_4:222813-222832 Msa0141660:CDS 50.0%
TTGTGGGGATGTTGTTGGTG+AGG - chr1_4:222818-222837 Msa0141660:CDS 50.0%
! TGTGGGGATGTTGTTGGTGA+GGG - chr1_4:222819-222838 Msa0141660:CDS 50.0%
! GGATGTTGTTGGTGAGGGAA+GGG - chr1_4:222824-222843 Msa0141660:CDS 50.0%
! GATGTTGTTGGTGAGGGAAG+GGG - chr1_4:222825-222844 Msa0141660:CDS 50.0%
! GGTTTTGCGACATGGAGGAT+TGG - chr1_4:222905-222924 Msa0141660:CDS 50.0%
CAGAAACACCGTACACGACA+CGG - chr1_4:223139-223158 Msa0141660:intron 50.0%
ATGTAGGACTTCCTGGTGCT+CGG + chr1_4:223841-223860 None:intergenic 50.0%
CTCAAGTCTCGGCACTTACA+AGG - chr1_4:223949-223968 Msa0141660:CDS 50.0%
AGGTTCTTGACCCACAAGCT+TGG + chr1_4:224161-224180 None:intergenic 50.0%
GCTTGTCATGCATTGGATGG+TGG - chr1_4:224452-224471 Msa0141660:CDS 50.0%
AGGCTGCAGTAGGAATCCAA+GGG + chr1_4:224484-224503 None:intergenic 50.0%
GATTCCTACTGCAGCCTGTA+CGG - chr1_4:224487-224506 Msa0141660:CDS 50.0%
TGAGGGAAACACTGCATCAC+AGG - chr1_4:224771-224790 Msa0141660:intron 50.0%
AACACCCTCTCTGCTACTGA+TGG - chr1_4:224934-224953 Msa0141660:intron 50.0%
ACACCCTCTCTGCTACTGAT+GGG - chr1_4:224935-224954 Msa0141660:intron 50.0%
CACATCGAGTGGTATGGGTA+TGG + chr1_4:225521-225540 None:intergenic 50.0%
CATACCCATACCACTCGATG+TGG - chr1_4:225519-225538 Msa0141660:intron 50.0%
AGTCCCACATCGAGTGGTAT+GGG + chr1_4:225526-225545 None:intergenic 50.0%
AAGTCCCACATCGAGTGGTA+TGG + chr1_4:225527-225546 None:intergenic 50.0%
ATACCACTCGATGTGGGACT+TGG - chr1_4:225526-225545 Msa0141660:intron 50.0%
TACCACTCGATGTGGGACTT+GGG - chr1_4:225527-225546 Msa0141660:intron 50.0%
!! CTAATGGGCGGTGCTATGAT+AGG + chr1_4:225574-225593 None:intergenic 50.0%
AGGCCATGTAAAGTGGCGTA+GGG + chr1_4:225620-225639 None:intergenic 50.0%
GAAAGGACTACCCTACGAAG+GGG + chr1_4:225644-225663 None:intergenic 50.0%
GGAAAGGACTACCCTACGAA+GGG + chr1_4:225645-225664 None:intergenic 50.0%
CAGATCCTGATCCCACTTAG+TGG + chr1_4:226718-226737 None:intergenic 50.0%
AGATGCCTGTTGAAAGGCCT+TGG - chr1_4:227255-227274 Msa0141660:intron 50.0%
GATGCCTGTTGAAAGGCCTT+GGG - chr1_4:227256-227275 Msa0141660:intron 50.0%
ACAGCAAAAGTTGTGGAGGG+TGG + chr1_4:227343-227362 None:intergenic 50.0%
CAGACTAATGGCCAACGAGA+AGG + chr1_4:227434-227453 None:intergenic 50.0%
!!! TGGGTCTGCCGTTTTTGCTA+TGG - chr1_4:227804-227823 Msa0141660:intron 50.0%
!!! GGGTCTGCCGTTTTTGCTAT+GGG - chr1_4:227805-227824 Msa0141660:intron 50.0%
AAAGTAGCGAAGTGCAGCAG+AGG + chr1_4:228071-228090 None:intergenic 50.0%
! GCACTTCGCTACTTTGAGCA+TGG - chr1_4:228076-228095 Msa0141660:intron 50.0%
! ACCCTTTTCCTGGAGGTAAC+CGG - chr1_4:228114-228133 Msa0141660:intron 50.0%
ACCGGTTACCTCCAGGAAAA+GGG + chr1_4:228118-228137 None:intergenic 50.0%
! TACCGGTTACCTCCAGGAAA+AGG + chr1_4:228119-228138 None:intergenic 50.0%
! TTTTCCTGGAGGTAACCGGT+AGG - chr1_4:228118-228137 Msa0141660:intron 50.0%
! AATACCTACCGGTTACCTCC+AGG + chr1_4:228125-228144 None:intergenic 50.0%
ACTAGGGTCGAGATATCCCA+AGG + chr1_4:228267-228286 None:intergenic 50.0%
GGATGCTCAAAATTGGGCCA+AGG + chr1_4:228444-228463 None:intergenic 50.0%
AGGAAATGTGTACGGGTGAG+AGG + chr1_4:228531-228550 None:intergenic 50.0%
CACAAAACAGAAGGGCCCAA+GGG + chr1_4:229075-229094 None:intergenic 50.0%
ACACAAAACAGAAGGGCCCA+AGG + chr1_4:229076-229095 None:intergenic 50.0%
TAGTTAGGAGTGGAGTGACG+AGG + chr1_4:229132-229151 None:intergenic 50.0%
CCAGTTGCCAAGAGAGGAAT+AGG + chr1_4:229220-229239 None:intergenic 50.0%
CCTATTCCTCTCTTGGCAAC+TGG - chr1_4:229217-229236 Msa0141660:intron 50.0%
!! CCTACTCTGAGACAATGGAG+TGG + chr1_4:229850-229869 None:intergenic 50.0%
CCACTCCATTGTCTCAGAGT+AGG - chr1_4:229847-229866 Msa0141660:intron 50.0%
CATGGGCAGACAGAAAGTTG+AGG + chr1_4:230249-230268 None:intergenic 50.0%
TGCCCATGCACTGGAAATGT+TGG - chr1_4:230261-230280 Msa0141660:intron 50.0%
GCTCCAACATTTCCAGTGCA+TGG + chr1_4:230267-230286 None:intergenic 50.0%
GGTAACTTGGAGGCTTCAAC+TGG - chr1_4:230372-230391 Msa0141660:intron 50.0%
CCAGGAAAAAGACCTGCAAC+TGG + chr1_4:230607-230626 None:intergenic 50.0%
! CCAGTTGCAGGTCTTTTTCC+TGG - chr1_4:230604-230623 Msa0141660:intron 50.0%
ACTAGGGAAGGAGGATGCTA+TGG + chr1_4:230653-230672 None:intergenic 50.0%
ACCAAACCAGTTGAGGAAGC+AGG - chr1_4:230753-230772 Msa0141660:intron 50.0%
TCCTGCTTCCTCAACTGGTT+TGG + chr1_4:230757-230776 None:intergenic 50.0%
GCTTCGGCGACTTCTATTAC+GGG + chr1_4:230941-230960 None:intergenic 50.0%
TGAGTGGGAAGAGGGTAGTA+GGG - chr1_4:231019-231038 Msa0141660:intron 50.0%
GGTGAGTTACCTGCTATAGC+AGG - chr1_4:231160-231179 Msa0141660:intron 50.0%
AGTAAGCCAGCTGTACACAG+CGG + chr1_4:231247-231266 None:intergenic 50.0%
!! CAGCTTGTTGCAGCAGCTAA+AGG + chr1_4:231410-231429 None:intergenic 50.0%
AAATCTGACCTGTAGTGCCG+TGG + chr1_4:232047-232066 None:intergenic 50.0%
GGCAGAATGTGATGCAGAAC+AGG - chr1_4:232205-232224 Msa0141660:intron 50.0%
! TAGTGGGCAAGAAAAGCCAG+AGG + chr1_4:232558-232577 None:intergenic 50.0%
!! GAGCTCTTTAGGGTTAAGCG+TGG + chr1_4:232953-232972 None:intergenic 50.0%
TTGTGTCGGAGCTTTGCTCT+GGG + chr1_4:233121-233140 None:intergenic 50.0%
CTCAGAGAGGAATCCTACTC+TGG - chr1_4:233141-233160 Msa0141660:intron 50.0%
TTTCTGTTCAGGGCCAGAGT+AGG + chr1_4:233157-233176 None:intergenic 50.0%
GGGCCTCTCTGATTACATGA+TGG + chr1_4:233463-233482 None:intergenic 50.0%
GACAGGTCTAAGCACGTGAA+TGG + chr1_4:233484-233503 None:intergenic 50.0%
! GTGCTGTTACTGGATGATGC+AGG - chr1_4:234258-234277 Msa0141660:intron 50.0%
GCGCGTGGAAACAAACAAAC+CGG + chr1_4:234372-234391 None:intergenic 50.0%
TGTCGATCTCCTTGGGTCTT+GGG - chr1_4:234460-234479 Msa0141660:intron 50.0%
ATCCTCATACCCAAGACCCA+AGG + chr1_4:234472-234491 None:intergenic 50.0%
TGACCGGACGTACAGAACAA+AGG - chr1_4:234557-234576 Msa0141660:intron 50.0%
TGCTATCATGCTAGACCGGT+CGG + chr1_4:234742-234761 None:intergenic 50.0%
TAATGATGTGGGTAACGCGG+AGG - chr1_4:234910-234929 Msa0141660:intron 50.0%
AAACCATTGCTGCGGCCATA+AGG + chr1_4:234956-234975 None:intergenic 50.0%
!!! GCCGCAGCAATGGTTTTTTG+TGG - chr1_4:234960-234979 Msa0141660:intron 50.0%
AGGTTAATAAGGGGGAGCCT+TGG - chr1_4:235802-235821 Msa0141660:CDS 50.0%
TCACGTGACTGAAAGGTCAC+AGG - chr1_4:235844-235863 Msa0141660:intron 50.0%
AAGGTCACAGGTTCAAGTCC+TGG - chr1_4:235856-235875 Msa0141660:intron 50.0%
ATTCCCGAACCCTGTGTATG+CGG - chr1_4:235938-235957 Msa0141660:intron 50.0%
! GATCAGGAATGGAGGCACAA+AGG + chr1_4:236170-236189 None:intergenic 50.0%
AGAAGGGACGAGATCAGGAA+TGG + chr1_4:236181-236200 None:intergenic 50.0%
! GGTTACCCCAGAGAAGTACA+TGG - chr1_4:236650-236669 Msa0141660:CDS 50.0%
!! TGTCGATTCTGCACACCAAC+AGG + chr1_4:237321-237340 None:intergenic 50.0%
GTTGGTGTGCAGAATCGACA+TGG - chr1_4:237321-237340 Msa0141660:intron 50.0%
CCTGAAGTTTCAGCTGCCAA+GGG - chr1_4:237384-237403 Msa0141660:intron 50.0%
CTGAAGTTTCAGCTGCCAAG+GGG - chr1_4:237385-237404 Msa0141660:intron 50.0%
TCCGTCACTCCTTTGTAGGT+CGG - chr1_4:237482-237501 Msa0141660:intron 50.0%
TCCGACCTACAAAGGAGTGA+CGG + chr1_4:237486-237505 None:intergenic 50.0%
!! TCACGGTGATGGGAAGAGAA+AGG - chr1_4:237734-237753 Msa0141660:CDS 50.0%
CTGGAGCTGCACAACACTAA+AGG - chr1_4:237822-237841 Msa0141660:CDS 50.0%
GAGCTGCACAACACTAAAGG+TGG - chr1_4:237825-237844 Msa0141660:CDS 50.0%
ATGGGAGGAATTCAAGAGGC+TGG - chr1_4:238043-238062 Msa0141660:CDS 50.0%
GTATTGCATGCCCTGACTGA+TGG - chr1_4:238085-238104 Msa0141660:CDS 50.0%
AACAACGGCCGAGTGGTGAA+GGG + chr1_4:222421-222440 None:intergenic 55.0%
AAACAACGGCCGAGTGGTGA+AGG + chr1_4:222422-222441 None:intergenic 55.0%
GAAAGGAAACAACGGCCGAG+TGG + chr1_4:222428-222447 None:intergenic 55.0%
GAGGGATTCGGAGGACAGAT+TGG + chr1_4:222632-222651 None:intergenic 55.0%
AGGTGTGAGAGGGAGGGATT+CGG + chr1_4:222644-222663 None:intergenic 55.0%
! AATAGGCGGGAGGTGTGAGA+GGG + chr1_4:222654-222673 None:intergenic 55.0%
! AAATAGGCGGGAGGTGTGAG+AGG + chr1_4:222655-222674 None:intergenic 55.0%
TATCGCGGCAGCGAAATAGG+CGG + chr1_4:222668-222687 None:intergenic 55.0%
GGATATCGCGGCAGCGAAAT+AGG + chr1_4:222671-222690 None:intergenic 55.0%
AGCAAGCGAGGACAGCGATA+CGG + chr1_4:222722-222741 None:intergenic 55.0%
! CGGAAGCGCGATTGCCATAA+AGG + chr1_4:222746-222765 None:intergenic 55.0%
TCCGTAGAGATAGCCCCAGT+CGG + chr1_4:222775-222794 None:intergenic 55.0%
TGGGGCTATCTCTACGGAGA+AGG - chr1_4:222777-222796 Msa0141660:three_prime_UTR 55.0%
CTATCTCTACGGAGAAGGCG+AGG - chr1_4:222782-222801 Msa0141660:exon 55.0%
AGGGAAGCAGCGGAGATTGT+GGG - chr1_4:222802-222821 Msa0141660:CDS 55.0%
! GGGATGTTGTTGGTGAGGGA+AGG - chr1_4:222823-222842 Msa0141660:CDS 55.0%
! TTGTTGGTGAGGGAAGGGGA+GGG - chr1_4:222829-222848 Msa0141660:CDS 55.0%
AGAGCTGCGGTGAAGTGTGT+TGG - chr1_4:222871-222890 Msa0141660:CDS 55.0%
GAGCTGCGGTGAAGTGTGTT+GGG - chr1_4:222872-222891 Msa0141660:CDS 55.0%
AGCTGCGGTGAAGTGTGTTG+GGG - chr1_4:222873-222892 Msa0141660:CDS 55.0%
! GCTAGGGTTTTGCGACATGG+AGG - chr1_4:222900-222919 Msa0141660:CDS 55.0%
TGTAGGACTTCCTGGTGCTC+GGG + chr1_4:223840-223859 None:intergenic 55.0%
CTGCAGTAGGAATCCAAGGG+GGG + chr1_4:224481-224500 None:intergenic 55.0%
GCTGCAGTAGGAATCCAAGG+GGG + chr1_4:224482-224501 None:intergenic 55.0%
GGCTGCAGTAGGAATCCAAG+GGG + chr1_4:224483-224502 None:intergenic 55.0%
CAGGCTGCAGTAGGAATCCA+AGG + chr1_4:224485-224504 None:intergenic 55.0%
AAGTCCGTACAGGCTGCAGT+AGG + chr1_4:224494-224513 None:intergenic 55.0%
GAGCCCATCAGTAGCAGAGA+GGG + chr1_4:224941-224960 None:intergenic 55.0%
TACCCAAGTCCCACATCGAG+TGG + chr1_4:225532-225551 None:intergenic 55.0%
! GCACCCTACGCCACTTTACA+TGG - chr1_4:225614-225633 Msa0141660:intron 55.0%
CAGGCCATGTAAAGTGGCGT+AGG + chr1_4:225621-225640 None:intergenic 55.0%
AAGGGGCAGGCCATGTAAAG+TGG + chr1_4:225627-225646 None:intergenic 55.0%
CGGAAAGGACTACCCTACGA+AGG + chr1_4:225646-225665 None:intergenic 55.0%
! AGGTTGTCGATGGCTCGGAA+AGG + chr1_4:225661-225680 None:intergenic 55.0%
TTTCCGAGCCATCGACAACC+TGG - chr1_4:225660-225679 Msa0141660:intron 55.0%
AAGCCAGGTTGTCGATGGCT+CGG + chr1_4:225666-225685 None:intergenic 55.0%
TGAGAGCTAGCTCCAAGGGA+GGG + chr1_4:225725-225744 None:intergenic 55.0%
TTGAGAGCTAGCTCCAAGGG+AGG + chr1_4:225726-225745 None:intergenic 55.0%
! TCCCTTGGAGCTAGCTCTCA+AGG - chr1_4:225725-225744 Msa0141660:intron 55.0%
CCCTTGAGAGCTAGCTCCAA+GGG + chr1_4:225729-225748 None:intergenic 55.0%
! CCCTTGGAGCTAGCTCTCAA+GGG - chr1_4:225726-225745 Msa0141660:intron 55.0%
TCCCTTGAGAGCTAGCTCCA+AGG + chr1_4:225730-225749 None:intergenic 55.0%
GCAAAGTCGTCTGGGTGTGT+TGG - chr1_4:227169-227188 Msa0141660:intron 55.0%
AGTCGTCTGGGTGTGTTGGA+AGG - chr1_4:227173-227192 Msa0141660:intron 55.0%
GTCGTCTGGGTGTGTTGGAA+GGG - chr1_4:227174-227193 Msa0141660:intron 55.0%
! GTTGGCCATTAGTCTGACCC+TGG - chr1_4:227438-227457 Msa0141660:intron 55.0%
CAAGGTAGAGGGGTAGCCAT+TGG + chr1_4:228153-228172 None:intergenic 55.0%
AAGCTGCCAGTTGCCAAGAG+AGG + chr1_4:229226-229245 None:intergenic 55.0%
CTTTCTGTCTGCCCATGCAC+TGG - chr1_4:230252-230271 Msa0141660:intron 55.0%
TAGCGTCCTGCTTCCTCAAC+TGG + chr1_4:230762-230781 None:intergenic 55.0%
TTACGGGAGACAGCAAAGGC+TGG + chr1_4:230925-230944 None:intergenic 55.0%
AAGAGGGATGGAGAGCAGCT+GGG - chr1_4:230969-230988 Msa0141660:intron 55.0%
CGCAGAAACGCGAAGAACAG+AGG - chr1_4:230995-231014 Msa0141660:intron 55.0%
GCGAAGAACAGAGGCTGAGT+GGG - chr1_4:231004-231023 Msa0141660:intron 55.0%
AACAGAGGCTGAGTGGGAAG+AGG - chr1_4:231010-231029 Msa0141660:intron 55.0%
ACAGAGGCTGAGTGGGAAGA+GGG - chr1_4:231011-231030 Msa0141660:intron 55.0%
CTGAGTGGGAAGAGGGTAGT+AGG - chr1_4:231018-231037 Msa0141660:intron 55.0%
GTAAGCCAGCTGTACACAGC+GGG + chr1_4:231246-231265 None:intergenic 55.0%
! TTGCGCCGGTGGAGATCTAA+TGG - chr1_4:232823-232842 Msa0141660:intron 55.0%
GGCTGCCATTAGATCTCCAC+CGG + chr1_4:232831-232850 None:intergenic 55.0%
GTTGTGTCGGAGCTTTGCTC+TGG + chr1_4:233122-233141 None:intergenic 55.0%
AGCTCCGACACAACTCAGAG+AGG - chr1_4:233128-233147 Msa0141660:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG + chr1_4:233752-233771 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG + chr1_4:233753-233772 None:intergenic 55.0%
! GTGTCGATCTCCTTGGGTCT+TGG - chr1_4:234459-234478 Msa0141660:intron 55.0%
CTCCTTGGGTCTTGGGTATG+AGG - chr1_4:234467-234486 Msa0141660:intron 55.0%
TGCTAGACCGGTCGGAATCT+AGG + chr1_4:234734-234753 None:intergenic 55.0%
AGATGGCACCGCTATCACGA+CGG - chr1_4:234835-234854 Msa0141660:intron 55.0%
AACGCGGAGGATATCGTGTG+TGG - chr1_4:234923-234942 Msa0141660:intron 55.0%
GTGTGTGGCGTGGAACCTTA+TGG - chr1_4:234938-234957 Msa0141660:intron 55.0%
GAACCTTATGGCCGCAGCAA+TGG - chr1_4:234950-234969 Msa0141660:intron 55.0%
CGGTTCAGTAGGACCAACAC+AGG + chr1_4:235572-235591 None:intergenic 55.0%
ACAACTTTGCCGTTGCGCCA+AGG + chr1_4:235822-235841 None:intergenic 55.0%
TTCCCGAACCCTGTGTATGC+GGG - chr1_4:235939-235958 Msa0141660:intron 55.0%
CCAAAGCTCCCGCATACACA+GGG + chr1_4:235950-235969 None:intergenic 55.0%
ACCAAAGCTCCCGCATACAC+AGG + chr1_4:235951-235970 None:intergenic 55.0%
AGGGACGAGATCAGGAATGG+AGG + chr1_4:236178-236197 None:intergenic 55.0%
! TGGTTCTGCTGCTGTCAGAG+TGG - chr1_4:236629-236648 Msa0141660:CDS 55.0%
ATGTTGCTGACAGGGGCTTC+AGG - chr1_4:236792-236811 Msa0141660:CDS 55.0%
GCCTGAAGTTTCAGCTGCCA+AGG - chr1_4:237383-237402 Msa0141660:intron 55.0%
CCCTTGGCAGCTGAAACTTC+AGG + chr1_4:237387-237406 None:intergenic 55.0%
CACTCCTTTGTAGGTCGGAG+CGG - chr1_4:237487-237506 Msa0141660:intron 55.0%
GAGGTCGGATGCGTCGTTGA+AGG + chr1_4:222527-222546 None:intergenic 60.0%
CATGAGCTGCTGGCAGAGGT+CGG + chr1_4:222542-222561 None:intergenic 60.0%
CGTAACGGTCCATGAGCTGC+TGG + chr1_4:222552-222571 None:intergenic 60.0%
GGACAGATTGGAGCGGAGAG+CGG + chr1_4:222620-222639 None:intergenic 60.0%
TGTGAGAGGGAGGGATTCGG+AGG + chr1_4:222641-222660 None:intergenic 60.0%
ATCGCGGCAGCGAAATAGGC+GGG + chr1_4:222667-222686 None:intergenic 60.0%
GATATCCACCGCCTCGTCGT+CGG - chr1_4:222684-222703 Msa0141660:three_prime_UTR 60.0%
TAGAGACTCCGACGACGAGG+CGG + chr1_4:222695-222714 None:intergenic 60.0%
GTCTAGAGACTCCGACGACG+AGG + chr1_4:222698-222717 None:intergenic 60.0%
ATAGCCCCAGTCGGCACAAG+CGG + chr1_4:222766-222785 None:intergenic 60.0%
GCCGACTGGGGCTATCTCTA+CGG - chr1_4:222771-222790 Msa0141660:three_prime_UTR 60.0%
GAGGGAAGCAGCGGAGATTG+TGG - chr1_4:222801-222820 Msa0141660:CDS 60.0%
GGGAAGCAGCGGAGATTGTG+GGG - chr1_4:222803-222822 Msa0141660:CDS 60.0%
! GTTGTTGGTGAGGGAAGGGG+AGG - chr1_4:222828-222847 Msa0141660:CDS 60.0%
GTGAGGGAAGGGGAGGGTTT+GGG - chr1_4:222835-222854 Msa0141660:CDS 60.0%
GACTTCGAAACCCGAGCACC+AGG - chr1_4:223827-223846 Msa0141660:intron 60.0%
! TGGATGGTGGTTTCCCCCCT+TGG - chr1_4:224465-224484 Msa0141660:CDS 60.0%
GGAGCCCATCAGTAGCAGAG+AGG + chr1_4:224942-224961 None:intergenic 60.0%
!! GGGACATCGGCTCTAATGGG+CGG + chr1_4:225586-225605 None:intergenic 60.0%
GCCCATTAGAGCCGATGTCC+CGG - chr1_4:225585-225604 Msa0141660:intron 60.0%
!! GCCGGGACATCGGCTCTAAT+GGG + chr1_4:225589-225608 None:intergenic 60.0%
GGTGCAATTCGCCGGGACAT+CGG + chr1_4:225599-225618 None:intergenic 60.0%
TGGCGTAGGGTGCAATTCGC+CGG + chr1_4:225607-225626 None:intergenic 60.0%
TACATGGCCTGCCCCTTCGT+AGG - chr1_4:225630-225649 Msa0141660:intron 60.0%
ACATGGCCTGCCCCTTCGTA+GGG - chr1_4:225631-225650 Msa0141660:intron 60.0%
GCACTTGGAGAACCCTCCCT+TGG - chr1_4:225710-225729 Msa0141660:intron 60.0%
GAAGAGGGATGGAGAGCAGC+TGG - chr1_4:230968-230987 Msa0141660:intron 60.0%
CGCGAAGAACAGAGGCTGAG+TGG - chr1_4:231003-231022 Msa0141660:intron 60.0%
AAGTGCCCGCTGTGTACAGC+TGG - chr1_4:231238-231257 Msa0141660:intron 60.0%
GCATACGCAGGGTTAGGACG+GGG + chr1_4:233741-233760 None:intergenic 60.0%
CGCATACGCAGGGTTAGGAC+GGG + chr1_4:233742-233761 None:intergenic 60.0%
CCGCATACGCAGGGTTAGGA+CGG + chr1_4:233743-233762 None:intergenic 60.0%
CCGTCCTAACCCTGCGTATG+CGG - chr1_4:233740-233759 Msa0141660:intron 60.0%
CGTCCTAACCCTGCGTATGC+GGG - chr1_4:233741-233760 Msa0141660:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+AGG - chr1_4:233758-233777 Msa0141660:intron 60.0%
TTCAAAAGGGCAGGGCAGCC+TGG + chr1_4:233779-233798 None:intergenic 60.0%
CCACCACTCCGTCGTGATAG+CGG + chr1_4:234846-234865 None:intergenic 60.0%
GTTTGGGCTGCTGTGGAGGT+GGG + chr1_4:234879-234898 None:intergenic 60.0%
ACACGTTTGGGCTGCTGTGG+AGG + chr1_4:234883-234902 None:intergenic 60.0%
GCAACACGTTTGGGCTGCTG+TGG + chr1_4:234886-234905 None:intergenic 60.0%
GGAGGATATCGTGTGTGGCG+TGG - chr1_4:234928-234947 Msa0141660:intron 60.0%
CTCCCGCATACACAGGGTTC+GGG + chr1_4:235944-235963 None:intergenic 60.0%
GCTCCCGCATACACAGGGTT+CGG + chr1_4:235945-235964 None:intergenic 60.0%
CCCTGTGTATGCGGGAGCTT+TGG - chr1_4:235947-235966 Msa0141660:intron 60.0%
! TGCGGGAGCTTTGGTGCACT+AGG - chr1_4:235956-235975 Msa0141660:intron 60.0%
TCCTTTGTAGGTCGGAGCGG+AGG - chr1_4:237490-237509 Msa0141660:intron 60.0%
TCCTCCGCTCCGACCTACAA+AGG + chr1_4:237494-237513 None:intergenic 60.0%
CGACCTCTGCCAGCAGCTCA+TGG - chr1_4:222540-222559 Msa0141660:three_prime_UTR 65.0%
GGTCCATGAGCTGCTGGCAG+AGG + chr1_4:222546-222565 None:intergenic 65.0%
GGGCGGGGGATTTGGCGTAA+CGG + chr1_4:222567-222586 None:intergenic 65.0%
AAGGAGGTGGCGATGGTGCG+GGG + chr1_4:222587-222606 None:intergenic 65.0%
CAAGGAGGTGGCGATGGTGC+GGG + chr1_4:222588-222607 None:intergenic 65.0%
GCAAGGAGGTGGCGATGGTG+CGG + chr1_4:222589-222608 None:intergenic 65.0%
CGACGAGGCGGTGGATATCG+CGG + chr1_4:222683-222702 None:intergenic 65.0%
!! CGCTTCCGCTTGTGCCGACT+GGG - chr1_4:222758-222777 Msa0141660:three_prime_UTR 65.0%
!! GCTTCCGCTTGTGCCGACTG+GGG - chr1_4:222759-222778 Msa0141660:three_prime_UTR 65.0%
GGAGAAGGCGAGGGAAGCAG+CGG - chr1_4:222792-222811 Msa0141660:exon 65.0%
GGTGAGGGAAGGGGAGGGTT+TGG - chr1_4:222834-222853 Msa0141660:CDS 65.0%
!! CGCCGGGACATCGGCTCTAA+TGG + chr1_4:225590-225609 None:intergenic 65.0%
GGCGTAGGGTGCAATTCGCC+GGG + chr1_4:225606-225625 None:intergenic 65.0%
GGACTACCCTACGAAGGGGC+AGG + chr1_4:225640-225659 None:intergenic 65.0%
! GGACGGGGCCCCACCATTTT+TGG + chr1_4:233726-233745 None:intergenic 65.0%
GCTCCCGCATACGCAGGGTT+AGG + chr1_4:233747-233766 None:intergenic 65.0%
GCACCGCTATCACGACGGAG+TGG - chr1_4:234840-234859 Msa0141660:intron 65.0%
CCGCTATCACGACGGAGTGG+TGG - chr1_4:234843-234862 Msa0141660:intron 65.0%
! CACGACGGAGTGGTGGAGAG+CGG - chr1_4:234850-234869 Msa0141660:intron 65.0%
CGTTTGGGCTGCTGTGGAGG+TGG + chr1_4:234880-234899 None:intergenic 65.0%
AAGGGGGAGCCTTGGCGCAA+CGG - chr1_4:235810-235829 Msa0141660:CDS 65.0%
ATGGTGCGGGGCGGGGGATT+TGG + chr1_4:222575-222594 None:intergenic 70.0%
CAGCGGCAAGGAGGTGGCGA+TGG + chr1_4:222594-222613 None:intergenic 70.0%
TCGCCACCTCCTTGCCGCTG+CGG - chr1_4:222594-222613 Msa0141660:three_prime_UTR 70.0%
! GGCGGGAGGTGTGAGAGGGA+GGG + chr1_4:222650-222669 None:intergenic 70.0%
! AGGCGGGAGGTGTGAGAGGG+AGG + chr1_4:222651-222670 None:intergenic 70.0%
GCGGCAGCGAAATAGGCGGG+AGG + chr1_4:222664-222683 None:intergenic 70.0%
AGACTCCGACGACGAGGCGG+TGG + chr1_4:222692-222711 None:intergenic 70.0%
! GCGCTTCCGCTTGTGCCGAC+TGG - chr1_4:222757-222776 Msa0141660:three_prime_UTR 70.0%
! GACGGAGTGGTGGAGAGCGG+TGG - chr1_4:234853-234872 Msa0141660:intron 70.0%
AGGTGGCGATGGTGCGGGGC+GGG + chr1_4:222583-222602 None:intergenic 75.0%
GAGGTGGCGATGGTGCGGGG+CGG + chr1_4:222584-222603 None:intergenic 75.0%
! GTGGCGATGGTGCGGGGCGG+GGG + chr1_4:222581-222600 None:intergenic 80.0%
! GGTGGCGATGGTGCGGGGCG+GGG + chr1_4:222582-222601 None:intergenic 80.0%
! CGGCCGCAGCGGCAAGGAGG+TGG + chr1_4:222600-222619 None:intergenic 80.0%
! GAGCGGCCGCAGCGGCAAGG+AGG + chr1_4:222603-222622 None:intergenic 80.0%
! GGAGAGCGGCCGCAGCGGCA+AGG + chr1_4:222606-222625 None:intergenic 80.0%
! GGAGCGGAGAGCGGCCGCAG+CGG + chr1_4:222611-222630 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 222398 238215 222398 ID=Msa0141660;Name=Msa0141660
chr1_4 mRNA 222398 238215 222398 ID=Msa0141660-mRNA-1;Parent=Msa0141660;Name=Msa0141660-mRNA-1;_AED=0.05;_eAED=0.05;_QI=104|0.94|0.94|1|1|1|18|400|1142
chr1_4 exon 222398 223113 222398 ID=Msa0141660-mRNA-1:exon:34;Parent=Msa0141660-mRNA-1
chr1_4 exon 223207 223280 223207 ID=Msa0141660-mRNA-1:exon:33;Parent=Msa0141660-mRNA-1
chr1_4 exon 223918 224019 223918 ID=Msa0141660-mRNA-1:exon:32;Parent=Msa0141660-mRNA-1
chr1_4 exon 224136 224282 224136 ID=Msa0141660-mRNA-1:exon:31;Parent=Msa0141660-mRNA-1
chr1_4 exon 224371 224532 224371 ID=Msa0141660-mRNA-1:exon:30;Parent=Msa0141660-mRNA-1
chr1_4 exon 225001 225114 225001 ID=Msa0141660-mRNA-1:exon:29;Parent=Msa0141660-mRNA-1
chr1_4 exon 225233 225304 225233 ID=Msa0141660-mRNA-1:exon:28;Parent=Msa0141660-mRNA-1
chr1_4 exon 226202 226333 226202 ID=Msa0141660-mRNA-1:exon:27;Parent=Msa0141660-mRNA-1
chr1_4 exon 226410 226466 226410 ID=Msa0141660-mRNA-1:exon:26;Parent=Msa0141660-mRNA-1
chr1_4 exon 226566 226659 226566 ID=Msa0141660-mRNA-1:exon:25;Parent=Msa0141660-mRNA-1
chr1_4 exon 227823 227989 227823 ID=Msa0141660-mRNA-1:exon:24;Parent=Msa0141660-mRNA-1
chr1_4 exon 228234 228455 228234 ID=Msa0141660-mRNA-1:exon:23;Parent=Msa0141660-mRNA-1
chr1_4 exon 228556 228737 228556 ID=Msa0141660-mRNA-1:exon:22;Parent=Msa0141660-mRNA-1
chr1_4 exon 232613 232823 232613 ID=Msa0141660-mRNA-1:exon:21;Parent=Msa0141660-mRNA-1
chr1_4 exon 234600 234691 234600 ID=Msa0141660-mRNA-1:exon:20;Parent=Msa0141660-mRNA-1
chr1_4 exon 235604 235855 235604 ID=Msa0141660-mRNA-1:exon:19;Parent=Msa0141660-mRNA-1
chr1_4 exon 236407 236953 236407 ID=Msa0141660-mRNA-1:exon:18;Parent=Msa0141660-mRNA-1
chr1_4 exon 237626 238215 237626 ID=Msa0141660-mRNA-1:exon:17;Parent=Msa0141660-mRNA-1
chr1_4 five_prime_UTR 238112 238215 238112 ID=Msa0141660-mRNA-1:five_prime_utr;Parent=Msa0141660-mRNA-1
chr1_4 CDS 237626 238111 237626 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 236407 236953 236407 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 235604 235855 235604 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 234600 234691 234600 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 232613 232823 232613 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 228556 228737 228556 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 228234 228455 228234 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 227823 227989 227823 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 226566 226659 226566 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 226410 226466 226410 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 226202 226333 226202 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 225233 225304 225233 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 225001 225114 225001 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 224371 224532 224371 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 224136 224282 224136 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 223918 224019 223918 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 223207 223280 223207 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 CDS 222798 223113 222798 ID=Msa0141660-mRNA-1:cds;Parent=Msa0141660-mRNA-1
chr1_4 three_prime_UTR 222398 222797 222398 ID=Msa0141660-mRNA-1:three_prime_utr;Parent=Msa0141660-mRNA-1
Gene Sequence

>Msa0141660

ATGGAAGAAGAGCACGCAGATTCCTTCAACGACGCATCCGACCTCTGCCAGCAGCTCATGGACCGTTACGCCAAATCCCCCGCCCCGCACCATCGCCACCTCCTTGCCGCTGCGGCCGCTCTCCGCTCCAATCTGTCCTCCGAATCCCTCCCTCTCACACCTCCCGCCTATTTCGCTGCCGCGATATCCACCGCCTCGTCGTCGGAGTCTCTAGACTCCGTATCGCTGTCCTCGCTTGCTTCCTTTATGGCAATCGCGCTTCCGCTTGTGCCGACTGGGGCTATCTCTACGGAGAAGGCGAGGGAAGCAGCGGAGATTGTGGGGATGTTGTTGGTGAGGGAAGGGGAGGGTTTGGGTGTTTCTAGCTTGAGAGCTGCGGTGAAGTGTGTTGGGGTTTTGCTAGGGTTTTGCGACATGGAGGATTGGGATTCTGTTAAATTAGGGTTTCAAATTTTGCTTAAATTCTCCATTGATAAACGCCCTAAGGTTCGAAGATGTGCTCTAGAGTCGCTCGAGAAGTTTTTTAGGTCTCTTAAATCTTCCACTGTTATCAAGGAAGCTAGCAAGTTAGTTTTGTCTGAACTAAAGAGGTGCATTGATTTGACTATGAAAGTAACTGCTTCGAGGACTGTTGATGAATGTAAAGATAACGGGACTTCGAAACCCGAGCACCAGGAAGTCCTACATGTACTAAATGTAGTTAATCTGGTTGCTCCTAATCTTTATCCTAAAGTTGTTCCTAAAGTTCTTTCAGAAGTGCATAAATTATTTGGTTCTCAAGTCTCGGCACTTACAAGGCATGTCCTTAAAACCGTAGAAGCTATTTTTGAAACTTCAAGAATCCGAAATATAGTCCTAGAGATAGAGAACATTGTAGTTTCTCTTGCTTCTTATGTATCTTTGGGTGATAAGAACCCACTGGATACTGTGATTTTTGCAGCAACCATATTAAGACTTGCAATGGACTTACTTTATACTGGACAACCAAGCTTGTGGGTCAAGAACCTTCCTCTAGTTTGTCAACCTATGATGGGGCTTCTAACTTCTGAGGGAAACACTGCATCACAGGCATCAAGTATCTTGAATGATGTGCTCAAGCATCGTATTGGTTCCCAAAGCTTATTAATTAGTACAGATCAAACAGTTCATGATGATAGTCAGCTAGGTTTGGAAGGTGATGCTATAAAATCAACATGTGCAGTTTTTGAGAACACCCTCTCTGCTACTGATGGGCTCCCAAATGAGCATCTTTTGTCAGTCATATCTGTTTTGTTTCATGAGCTTGGGGAATTCTCATTTGTATCTATGAGGAATATTGTGCTTAAACTTTCTGACCTGATGATTCAGACTTCCGATAGCAAGGCTAATAATGAGCATCTTCAGAAATGCATTGGGTCTGCCGTTTTTGCTATGGGACCAGAGAAATTTCTCATACTTGTACCTATCTCTCTTGATGAACACAGCTATACTTATTCAAATATTTGGCTAGTACCGATCTTGAAGCAGTACATTACTGGAGCATCACTTGCTTTCTACATGGAGCATATCGTGCCTCTTGCAAAGTCCTTTAAGAAGGCTAGTCGTAAAGTCAAAAAGTCAAAGGTCAGTCAAGATCTGCTGGTTCGTGCCCAAGAATTATGGGGATTACTTCCCAGCTTTTGTCGTCATGCAACTGATACATACAAAAGTTTTGCTCGTCTAAGTGATGTGCTGACTACTTTTCTTAAAAAGAACCTCTCCATGCATGAAAATGTTTCCACGGCACTACAGATTCTTGTGAACGAGAATAAAGCTGCACTTAGCCCTAAAAAGGAGGAGGCAGAATGTGATGCAGAACAGGATTCTTCATTAGAATTCAGCATGCTACCTGCTTATTCAAAGAAAGCTGCCACCAGAAATATGAAGGCCTTGGAATCTTATTCGAGTCAATTGCTTCATATTTTATCAGATTTATTTATAAGTTCACCTCCTCAAACACGCATTTCATTAAAGGGTGCAATCAGCTGCCTAGCTTCGATAGCTAATTTTTCTGTAACCAAAGAAGTTTTTATGTCTCTGCTCAAGAGGTTTGAGCTTGTAGATTGTGAAGGTGAAGTATTGACTAGTAACAGCAGTGTGTTGGACATTGAGCCAAGTGATGAGACGGGATTTTCTCAAAGGTGCTCGATATTGGAGATATCATCTTGTCTTGTCAAAGGAGCCAATGATAATCTTGTTGAGATAATTTATAATTTAACAATACATTCCTTTCAGGCAACTAATGAGAGTGTTCATTATGAAGCATACAACACTTTGAGCAAAATTTTGAAGGAGCACCCGTGCTATTCTTCTAAATATATGGAGCTAATTGATTTATTACTTAGTATAAAACCTCCAACTGATGTTGCTTCTCTTAGAAGCCGGTTTGTTTGTTTCCACGCGCTGATGGTTCACATTGTGAAGATTAGTTTAGAAGAGGATGTGAACTCGAAGGCTTTTCTTATTCTGAATGAAATCATTCTCACATTAAAAGATGGAAAGGATGAAGCTAGGAAAGAAGCTTGCGATTTACTCTTAAATATAAGTTATAGCTTGAGAGACTTATCCTGTGTTGGTCCTACTGAACCGTATCACAAACTAGTTAGCATGATAATGGGATATCTTTCCGGTTCATCTCCTCATATAAAAAGTGGAGCAGTGTCTGCACTGTCAGTATTGGTATATAAGGATGCAAACCTTTGTGCCTCCATTCCTGATCTCGTCCCTTCTCTTTTATCGTTGCTGCACACCAAAGATACAGAAATCATAAAAGCTGTCTTGGGCTTTTTTAAAGTGATGGTGTCTTGCTTAGAAGCAAGAGAGTTGCAGAATATTCTCTCAGATGTTGTGTCTGAAATCATCCGTTGGTCGTCTGTTTCAAGACATCATTTTAAAACGAAGGCATGTCTAATTTCTAATGTCACAGTCATATTTGAAATATTAATTCGGAAGTGTGGTTCTGCTGCTGTCAGAGTGGTTACCCCAGAGAAGTACATGGATTTTCTCAAGACAGTTTTAGAGAATCGACATGGAAAATCAAATGAAGCAGCCGCTAATGATACAGAAAATGCGCCTGAAGTTTCAGCTGCCAAGGGGTCGGAGCGGAGGAAACCTGATATTTCGAACACCCAAGAGAAAGACTTGTTTCAGCAAAAAAAGAGAAAGGGGAAATTTGAGAGAGACTTGTCAAGCAAAACTGAACCAACTAAGTTTAGGAGCAATGATGAATTCAGATCAGCCAAGAGAAGTAGGCATTCTAATGATACAAATTCAAATTTAAGGTCAGAAGGAAGTATGAAGGGCAATAAAAGCCGGTTCAAAAGTTTCACTCACGGTGATGGGAAGAGAAAGGATAAAGCTTCTAATGTACGGATAGGAGCTTCCAAATCAAACAAGTTCAAAAGGAAGTAA
Protein sequence

>Msa0141660

MEEEHADSFNDASDLCQQLMDRYAKSPAPHHRHLLAAAAALRSNLSSESLPLTPPAYFAAAISTASSSESLDSVSLSSLASFMAIALPLVPTGAISTEKAREAAEIVGMLLVREGEGLGVSSLRAAVKCVGVLLGFCDMEDWDSVKLGFQILLKFSIDKRPKVRRCALESLEKFFRSLKSSTVIKEASKLVLSELKRCIDLTMKVTASRTVDECKDNGTSKPEHQEVLHVLNVVNLVAPNLYPKVVPKVLSEVHKLFGSQVSALTRHVLKTVEAIFETSRIRNIVLEIENIVVSLASYVSLGDKNPLDTVIFAATILRLAMDLLYTGQPSLWVKNLPLVCQPMMGLLTSEGNTASQASSILNDVLKHRIGSQSLLISTDQTVHDDSQLGLEGDAIKSTCAVFENTLSATDGLPNEHLLSVISVLFHELGEFSFVSMRNIVLKLSDLMIQTSDSKANNEHLQKCIGSAVFAMGPEKFLILVPISLDEHSYTYSNIWLVPILKQYITGASLAFYMEHIVPLAKSFKKASRKVKKSKVSQDLLVRAQELWGLLPSFCRHATDTYKSFARLSDVLTTFLKKNLSMHENVSTALQILVNENKAALSPKKEEAECDAEQDSSLEFSMLPAYSKKAATRNMKALESYSSQLLHILSDLFISSPPQTRISLKGAISCLASIANFSVTKEVFMSLLKRFELVDCEGEVLTSNSSVLDIEPSDETGFSQRCSILEISSCLVKGANDNLVEIIYNLTIHSFQATNESVHYEAYNTLSKILKEHPCYSSKYMELIDLLLSIKPPTDVASLRSRFVCFHALMVHIVKISLEEDVNSKAFLILNEIILTLKDGKDEARKEACDLLLNISYSLRDLSCVGPTEPYHKLVSMIMGYLSGSSPHIKSGAVSALSVLVYKDANLCASIPDLVPSLLSLLHTKDTEIIKAVLGFFKVMVSCLEARELQNILSDVVSEIIRWSSVSRHHFKTKACLISNVTVIFEILIRKCGSAAVRVVTPEKYMDFLKTVLENRHGKSNEAAANDTENAPEVSAAKGSERRKPDISNTQEKDLFQQKKRKGKFERDLSSKTEPTKFRSNDEFRSAKRSRHSNDTNSNLRSEGSMKGNKSRFKSFTHGDGKRKDKASNVRIGASKSNKFKRK*