Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223160 | XP_003597364.2 | 89.133 | 727 | 21 | 4 | 1 | 669 | 1 | 727 | 0.0 | 1307 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223160 | sp|Q6R0E3|TRP5_ARATH | 47.971 | 419 | 148 | 13 | 281 | 656 | 225 | 616 | 1.19e-92 | 303 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223160 | G7IHQ2 | 89.133 | 727 | 21 | 4 | 1 | 669 | 1 | 727 | 0.0 | 1307 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021220 | Msa0223160 | 0.828978 | 6.654520e-55 | -8.615850e-47 |
| Msa0030200 | Msa0223160 | 0.810516 | 1.108750e-50 | -8.615850e-47 |
| Msa0061630 | Msa0223160 | 0.829861 | 4.062617e-55 | -8.615850e-47 |
| Msa0070700 | Msa0223160 | 0.814229 | 1.713452e-51 | -8.615850e-47 |
| Msa0115130 | Msa0223160 | 0.822266 | 2.596655e-53 | -8.615850e-47 |
| Msa0115400 | Msa0223160 | 0.813956 | 1.968844e-51 | -8.615850e-47 |
| Msa0118590 | Msa0223160 | 0.807681 | 4.487769e-50 | -8.615850e-47 |
| Msa0127020 | Msa0223160 | 0.834196 | 3.446380e-56 | -8.615850e-47 |
| Msa0139350 | Msa0223160 | 0.827315 | 1.674484e-54 | -8.615850e-47 |
| Msa0141660 | Msa0223160 | 0.826092 | 3.279368e-54 | -8.615850e-47 |
| Msa0144370 | Msa0223160 | 0.808494 | 3.013532e-50 | -8.615850e-47 |
| Msa0159170 | Msa0223160 | 0.812056 | 5.137811e-51 | -8.615850e-47 |
| Msa0168230 | Msa0223160 | 0.802944 | 4.411160e-49 | -8.615850e-47 |
| Msa0169280 | Msa0223160 | 0.833771 | 4.404809e-56 | -8.615850e-47 |
| Msa0223160 | Msa0241390 | 0.804493 | 2.104194e-49 | -8.615850e-47 |
| Msa0223160 | Msa0264460 | 0.856044 | 4.198642e-62 | -8.615850e-47 |
| Msa0223160 | Msa0279220 | 0.803690 | 3.091108e-49 | -8.615850e-47 |
| Msa0223160 | Msa0279240 | 0.827285 | 1.702480e-54 | -8.615850e-47 |
| Msa0223160 | Msa0302530 | 0.961915 | 2.935427e-120 | -8.615850e-47 |
| Msa0223160 | Msa0318980 | 0.808496 | 3.009903e-50 | -8.615850e-47 |
| Msa0223160 | Msa0339700 | 0.987810 | 1.271984e-171 | -8.615850e-47 |
| Msa0223160 | Msa0388700 | 0.821701 | 3.509929e-53 | -8.615850e-47 |
| Msa0223160 | Msa0449250 | 0.805363 | 1.384121e-49 | -8.615850e-47 |
| Msa0223160 | Msa0481030 | 0.813815 | 2.114954e-51 | -8.615850e-47 |
| Msa0223160 | Msa0482130 | 0.847925 | 8.493106e-60 | -8.615850e-47 |
| Msa0223160 | Msa0500470 | 0.822473 | 2.324377e-53 | -8.615850e-47 |
| Msa0223160 | Msa0502090 | 0.800798 | 1.217069e-48 | -8.615850e-47 |
| Msa0223160 | Msa0519160 | 0.800592 | 1.340635e-48 | -8.615850e-47 |
| Msa0223160 | Msa0542090 | 0.806978 | 6.325383e-50 | -8.615850e-47 |
| Msa0223160 | Msa0542130 | 0.808464 | 3.057219e-50 | -8.615850e-47 |
| Msa0223160 | Msa0581280 | 0.824043 | 9.996503e-54 | -8.615850e-47 |
| Msa0223160 | Msa0665100 | 0.807872 | 4.087948e-50 | -8.615850e-47 |
| Msa0223160 | Msa0672550 | 0.831191 | 1.919429e-55 | -8.615850e-47 |
| Msa0223160 | Msa0741440 | 0.802915 | 4.472145e-49 | -8.615850e-47 |
| Msa0223160 | Msa0745740 | 0.842966 | 1.872168e-58 | -8.615850e-47 |
| Msa0223160 | Msa0826990 | 0.821453 | 4.005485e-53 | -8.615850e-47 |
| Msa0223160 | Msa0830540 | 0.800540 | 1.373982e-48 | -8.615850e-47 |
| Msa0223160 | Msa0987370 | 0.800311 | 1.529935e-48 | -8.615850e-47 |
| Msa0223160 | Msa1083970 | 0.826824 | 2.194933e-54 | -8.615850e-47 |
| Msa0223160 | Msa1153060 | 0.824894 | 6.301427e-54 | -8.615850e-47 |
| Msa0223160 | Msa1160590 | 0.836123 | 1.125061e-56 | -8.615850e-47 |
| Msa0223160 | Msa1174470 | 0.818666 | 1.739930e-52 | -8.615850e-47 |
| Msa0223160 | Msa1179070 | 0.801090 | 1.060767e-48 | -8.615850e-47 |
| Msa0223160 | Msa1180500 | 0.800589 | 1.342665e-48 | -8.615850e-47 |
| Msa0223160 | Msa1181250 | 0.822731 | 2.025232e-53 | -8.615850e-47 |
| Msa0223160 | Msa1181330 | 0.829439 | 5.144698e-55 | -8.615850e-47 |
| Msa0223160 | Msa1209200 | 0.825395 | 4.797369e-54 | -8.615850e-47 |
| Msa0223160 | Msa1209260 | 0.832952 | 7.047121e-56 | -8.615850e-47 |
| Msa0223160 | Msa1224590 | 0.814314 | 1.640726e-51 | -8.615850e-47 |
| Msa0223160 | Msa1231840 | 0.812139 | 4.925860e-51 | -8.615850e-47 |
| Msa0223160 | Msa1237630 | 0.822858 | 1.891927e-53 | -8.615850e-47 |
| Msa0223160 | Msa1237700 | 0.819425 | 1.169282e-52 | -8.615850e-47 |
| Msa0223160 | Msa1245930 | 0.804557 | 2.039714e-49 | -8.615850e-47 |
| Msa0223160 | Msa1259060 | 0.816424 | 5.569523e-52 | -8.615850e-47 |
| Msa0223160 | Msa1266990 | 0.811763 | 5.949685e-51 | -8.615850e-47 |
| Msa0223160 | Msa1274560 | 0.819104 | 1.383517e-52 | -8.615850e-47 |
| Msa0223160 | Msa1275980 | 0.815647 | 8.304751e-52 | -8.615850e-47 |
| Msa0223160 | Msa1312520 | 0.802500 | 5.448644e-49 | -8.615850e-47 |
| Msa0223160 | Msa1316360 | 0.810811 | 9.574893e-51 | -8.615850e-47 |
| Msa0223160 | Msa1346360 | 0.802503 | 5.440487e-49 | -8.615850e-47 |
| Msa0223160 | Msa1384880 | 0.801466 | 8.887831e-49 | -8.615850e-47 |
| Msa0223160 | Msa1400580 | 0.822152 | 2.759581e-53 | -8.615850e-47 |
| Msa0223160 | Msa1412130 | 0.800804 | 1.213615e-48 | -8.615850e-47 |
| Msa0223160 | Msa1419870 | 0.828512 | 8.626263e-55 | -8.615850e-47 |
| Msa0223160 | Msa1439550 | 0.802631 | 5.120108e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223160 | MtrunA17_Chr2g0328331 | 89.133 | 727 | 21 | 4 | 1 | 669 | 1 | 727 | 0.0 | 1307 |
| Msa0223160 | MtrunA17_Chr3g0111941 | 39.619 | 472 | 213 | 9 | 246 | 668 | 183 | 631 | 9.52e-85 | 279 |
| Msa0223160 | MtrunA17_Chr3g0111941 | 31.788 | 151 | 63 | 5 | 1 | 111 | 1 | 151 | 6.16e-11 | 65.5 |
| Msa0223160 | MtrunA17_Chr5g0435351 | 40.426 | 470 | 201 | 11 | 250 | 661 | 157 | 605 | 1.55e-77 | 259 |
| Msa0223160 | MtrunA17_Chr7g0238741 | 39.865 | 444 | 173 | 12 | 267 | 652 | 196 | 603 | 2.41e-72 | 245 |
| Msa0223160 | MtrunA17_Chr7g0238741 | 41.346 | 104 | 50 | 4 | 1 | 98 | 1 | 99 | 9.90e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0223160 | AT1G07540.1 | 47.971 | 419 | 148 | 13 | 281 | 656 | 225 | 616 | 1.21e-93 | 303 |
| Msa0223160 | AT1G07540.1 | 56.140 | 57 | 24 | 1 | 1 | 57 | 1 | 56 | 5.21e-11 | 66.2 |
| Msa0223160 | AT3G12560.1 | 40.167 | 478 | 194 | 10 | 228 | 656 | 163 | 597 | 5.16e-87 | 285 |
| Msa0223160 | AT3G12560.2 | 40.167 | 478 | 194 | 10 | 228 | 656 | 163 | 597 | 5.16e-87 | 285 |
| Msa0223160 | AT3G46590.5 | 43.750 | 448 | 170 | 17 | 241 | 651 | 93 | 495 | 5.31e-86 | 279 |
| Msa0223160 | AT3G46590.1 | 44.196 | 448 | 168 | 18 | 241 | 651 | 133 | 535 | 1.00e-85 | 280 |
| Msa0223160 | AT3G46590.2 | 43.750 | 448 | 170 | 17 | 241 | 651 | 134 | 536 | 1.18e-85 | 280 |
| Msa0223160 | AT3G46590.3 | 43.527 | 448 | 165 | 17 | 241 | 651 | 134 | 530 | 1.72e-84 | 276 |
| Msa0223160 | AT5G13820.2 | 37.938 | 485 | 221 | 12 | 238 | 669 | 177 | 634 | 2.17e-78 | 263 |
| Msa0223160 | AT5G13820.1 | 37.938 | 485 | 221 | 12 | 238 | 669 | 177 | 634 | 2.17e-78 | 263 |
| Msa0223160 | AT5G59430.3 | 41.215 | 461 | 168 | 18 | 239 | 652 | 148 | 552 | 3.06e-75 | 252 |
| Msa0223160 | AT5G59430.4 | 40.830 | 458 | 168 | 18 | 239 | 649 | 147 | 548 | 1.12e-72 | 246 |
| Msa0223160 | AT5G59430.2 | 40.830 | 458 | 168 | 18 | 239 | 649 | 148 | 549 | 1.48e-72 | 245 |
| Msa0223160 | AT5G59430.1 | 40.830 | 458 | 168 | 18 | 239 | 649 | 148 | 549 | 1.48e-72 | 245 |
| Msa0223160 | AT5G59430.5 | 40.830 | 458 | 168 | 18 | 239 | 649 | 148 | 549 | 1.48e-72 | 245 |
| Msa0223160 | AT3G53790.1 | 40.520 | 269 | 84 | 6 | 422 | 649 | 163 | 396 | 1.11e-46 | 170 |
| Msa0223160 | AT3G46590.4 | 43.911 | 271 | 110 | 11 | 241 | 507 | 134 | 366 | 1.44e-46 | 170 |
Find 165 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTGATCATTTCTTATTT+TGG | 0.137908 | 2_1:-72706921 | Msa0223160:five_prime_UTR |
| GAATATTCATTTGAGATATT+TGG | 0.208514 | 2_1:+72705613 | None:intergenic |
| TAAAGTAGAAGGCAAGTTTC+AGG | 0.226508 | 2_1:+72703213 | None:intergenic |
| ATTACTAGTAAAGTTGAATT+AGG | 0.235538 | 2_1:-72706214 | Msa0223160:CDS |
| GGCTATTTCTTGTAAGTAAA+TGG | 0.236955 | 2_1:-72702925 | Msa0223160:three_prime_UTR |
| GCCTGTTCCTCAAGAACTTT+TGG | 0.237700 | 2_1:-72703307 | Msa0223160:CDS |
| TCTCAGTTCGCTTTGGCTTC+TGG | 0.241253 | 2_1:+72704267 | None:intergenic |
| GAAGCAACAGTTGCAGTTTC+AGG | 0.244154 | 2_1:+72705149 | None:intergenic |
| AGGAATAGTTACAAGTTCTT+TGG | 0.254884 | 2_1:+72704328 | None:intergenic |
| TGACCCTGCCAGTCTCAATT+TGG | 0.255588 | 2_1:+72706966 | None:intergenic |
| AGTCCCTCCGTATCCATTTC+AGG | 0.264251 | 2_1:+72704308 | None:intergenic |
| TCAACTTCGGCAACAGAAAA+AGG | 0.271689 | 2_1:+72704218 | None:intergenic |
| AATGTGTGCGATTGACTTAT+TGG | 0.277403 | 2_1:-72706659 | Msa0223160:CDS |
| ATTTGATAATGCAGGATAAA+TGG | 0.287402 | 2_1:-72703380 | Msa0223160:intron |
| GGTAAGCTTTGCGAAGAATT+AGG | 0.294244 | 2_1:+72704884 | None:intergenic |
| TTATGGATTTGTTGGCTATC+AGG | 0.301924 | 2_1:-72706860 | Msa0223160:CDS |
| TGATAACCAGCTGGATGCTT+TGG | 0.304017 | 2_1:-72704921 | Msa0223160:CDS |
| AAATGGTTTATATGCAATAA+AGG | 0.304781 | 2_1:-72702908 | Msa0223160:three_prime_UTR |
| GCTTCCAAGGATGACTTTCC+AGG | 0.307385 | 2_1:+72705354 | None:intergenic |
| CATCAAATGAATCGAAATTT+CGG | 0.310457 | 2_1:+72708083 | None:intergenic |
| ACTATGGTTCTTTCCCTGTT+TGG | 0.311608 | 2_1:-72702951 | Msa0223160:three_prime_UTR |
| AGGATAGATTATGGATTTGT+TGG | 0.319703 | 2_1:-72706868 | Msa0223160:CDS |
| ATTGGTTTGGTTAGGTGTTA+AGG | 0.324737 | 2_1:-72703142 | Msa0223160:three_prime_UTR |
| TGAATGGTTTGTTTGCATCT+AGG | 0.330283 | 2_1:+72706536 | None:intergenic |
| TTGCCTTCTACTTTAATATG+AGG | 0.339068 | 2_1:-72703205 | Msa0223160:exon |
| CTGTCACAACTAGCTTCATT+AGG | 0.344968 | 2_1:+72706502 | None:intergenic |
| GTATAGGTGATCAAAGAATA+AGG | 0.363994 | 2_1:-72705868 | Msa0223160:CDS |
| AAGAAATAGCCTCTCCAAAC+AGG | 0.368417 | 2_1:+72702937 | None:intergenic |
| AATTCGCATCTTGAAATTGA+TGG | 0.376266 | 2_1:-72706337 | Msa0223160:CDS |
| TTGGCATGGTTTCTGAGATA+TGG | 0.379971 | 2_1:-72706902 | Msa0223160:exon |
| CCTTGATTCGTGTCATTGTT+GGG | 0.381125 | 2_1:+72705507 | None:intergenic |
| CCTCAAGCGCCAATAGGTTT+AGG | 0.381466 | 2_1:-72706049 | Msa0223160:CDS |
| TCCAAAAGTTCTTGAGGAAC+AGG | 0.384204 | 2_1:+72703306 | None:intergenic |
| GATAACCAGCTGGATGCTTT+GGG | 0.385054 | 2_1:-72704920 | Msa0223160:CDS |
| GGTGGCAATGCCAAGTTGTC+GGG | 0.385312 | 2_1:-72706028 | Msa0223160:CDS |
| AATGGTTTATATGCAATAAA+GGG | 0.385969 | 2_1:-72702907 | Msa0223160:three_prime_UTR |
| ACTTGTAACTATTCCTGAAA+TGG | 0.387283 | 2_1:-72704321 | Msa0223160:CDS |
| CGCTTTGGCTTCTGGTTCAC+TGG | 0.388587 | 2_1:+72704275 | None:intergenic |
| CCTTCTTCTATCAATACATT+AGG | 0.390584 | 2_1:-72704371 | Msa0223160:CDS |
| CATCTCTAAGTTTCTTTCCA+TGG | 0.391295 | 2_1:+72704978 | None:intergenic |
| GCATTGCCACCTAAACCTAT+TGG | 0.392718 | 2_1:+72706040 | None:intergenic |
| ATGTGAGATCGGAGTATATT+CGG | 0.393206 | 2_1:+72708120 | None:intergenic |
| GCGCAGAAGAGGATAGATTA+TGG | 0.397692 | 2_1:-72706877 | Msa0223160:CDS |
| GTTGCTTTGTTTGTTGCTGT+TGG | 0.399464 | 2_1:+72703253 | None:intergenic |
| TGCAACTGTTGCTTCCTTGA+AGG | 0.401829 | 2_1:-72705141 | Msa0223160:intron |
| AGTAAAACTCTACTTCAAAC+TGG | 0.401926 | 2_1:-72704953 | Msa0223160:CDS |
| CATTATCCTTGCTCACACTA+TGG | 0.402352 | 2_1:-72702967 | Msa0223160:three_prime_UTR |
| TCCTCACTGCTCATGCATAT+TGG | 0.404954 | 2_1:-72703278 | Msa0223160:CDS |
| AACTCCACTTCAAATTCTAA+TGG | 0.407925 | 2_1:-72705561 | Msa0223160:CDS |
| AAAGATTGGCTTCTAAATAT+CGG | 0.408174 | 2_1:-72705844 | Msa0223160:CDS |
| TATACAATTCTTTGATCTAA+AGG | 0.408351 | 2_1:+72705886 | None:intergenic |
| CGTGTGGCACGCGGCTTTGT+TGG | 0.410650 | 2_1:+72706835 | None:intergenic |
| TTGCTTTGTTTGTTGCTGTT+GGG | 0.413177 | 2_1:+72703254 | None:intergenic |
| GCTTCAACACAGATTTGTTA+AGG | 0.414000 | 2_1:-72706476 | Msa0223160:CDS |
| TTTAGATCAAAGAATTGTAT+AGG | 0.421024 | 2_1:-72705884 | Msa0223160:CDS |
| TGTGAGATCTCAGTTCGCTT+TGG | 0.423608 | 2_1:+72704260 | None:intergenic |
| TGGTCCACAGAAAGCAGTTA+TGG | 0.424624 | 2_1:-72705050 | Msa0223160:intron |
| ACACAGATTTGTTAAGGAAC+CGG | 0.425345 | 2_1:-72706470 | Msa0223160:CDS |
| GGATGCTTTGGGCTTCACCT+TGG | 0.427101 | 2_1:-72704909 | Msa0223160:CDS |
| GATCCGTCACCAGGTGTGAT+TGG | 0.433742 | 2_1:+72706595 | None:intergenic |
| CTTTGTAGATTGGTTTGGTT+AGG | 0.439650 | 2_1:-72703150 | Msa0223160:three_prime_UTR |
| ATCTACAAAGTCACATCATA+TGG | 0.440519 | 2_1:+72703163 | None:intergenic |
| ACCTTGATTCGTGTCATTGT+TGG | 0.442882 | 2_1:+72705506 | None:intergenic |
| CAATAAAGTGCCGGCGGCTA+CGG | 0.444859 | 2_1:+72706633 | None:intergenic |
| GAGGTTGGTTGCTGACGTTT+TGG | 0.452923 | 2_1:-72706269 | Msa0223160:CDS |
| AGGTGGCAATGCCAAGTTGT+CGG | 0.455271 | 2_1:-72706029 | Msa0223160:CDS |
| AAAGTAGAAGGCAAGTTTCA+GGG | 0.459532 | 2_1:+72703214 | None:intergenic |
| ATCTTTGAAGATAATTCTGT+GGG | 0.461137 | 2_1:-72708049 | Msa0223160:five_prime_UTR |
| AACATGCCTCTATCTTTACT+AGG | 0.462368 | 2_1:-72704818 | Msa0223160:CDS |
| TTCAACGACTTATTTGCATC+CGG | 0.470804 | 2_1:+72706451 | None:intergenic |
| AAAGTTGAATTAGGATCCTC+TGG | 0.471052 | 2_1:-72706205 | Msa0223160:CDS |
| GTGTTTCTTGTTCATCATCT+CGG | 0.472466 | 2_1:-72705485 | Msa0223160:CDS |
| TTAGGAAGCTCGGCTTTGAA+TGG | 0.472558 | 2_1:+72706520 | None:intergenic |
| GCTTCCAAATTGAGACTGGC+AGG | 0.481659 | 2_1:-72706970 | Msa0223160:five_prime_UTR |
| AAGTTGCAATCACTACAATC+TGG | 0.484938 | 2_1:+72706178 | None:intergenic |
| GTGTTAAGGTTTCTGACCCT+TGG | 0.485722 | 2_1:-72703128 | Msa0223160:three_prime_UTR |
| TGCCTTCTACTTTAATATGA+GGG | 0.487747 | 2_1:-72703204 | Msa0223160:exon |
| CAAGGAAGAAAGTGAAGCAT+AGG | 0.488785 | 2_1:-72703005 | Msa0223160:three_prime_UTR |
| GTACCAATCGGTACTGCGAC+TGG | 0.489310 | 2_1:-72706106 | Msa0223160:CDS |
| TTCTATTTGCTCAGAGAGGT+TGG | 0.489879 | 2_1:-72706284 | Msa0223160:CDS |
| TGTGACTTTGTAGATTGGTT+TGG | 0.490365 | 2_1:-72703155 | Msa0223160:three_prime_UTR |
| TATGATGTGACTTTGTAGAT+TGG | 0.490431 | 2_1:-72703160 | Msa0223160:three_prime_UTR |
| TCAAAGAATAAGGAAAAGAT+TGG | 0.490559 | 2_1:-72705858 | Msa0223160:CDS |
| TTCAACCAGTGCTTCAACTT+CGG | 0.497529 | 2_1:+72704205 | None:intergenic |
| GGCTCACCTCTTCTTTGTTG+AGG | 0.499211 | 2_1:+72703327 | None:intergenic |
| ATGCTGTGTTGAGGAACTAA+TGG | 0.499819 | 2_1:-72706080 | Msa0223160:CDS |
| GATCAAATCATTTAAAGTGC+CGG | 0.507969 | 2_1:-72705189 | Msa0223160:CDS |
| CCTTTGAACAACGAGCTACT+AGG | 0.508550 | 2_1:+72705989 | None:intergenic |
| CCTAGTAGCTCGTTGTTCAA+AGG | 0.513868 | 2_1:-72705989 | Msa0223160:CDS |
| CCTTCTACTTTAATATGAGG+GGG | 0.515655 | 2_1:-72703202 | Msa0223160:exon |
| CACAACGCCGCCGAATTCGC+AGG | 0.516918 | 2_1:-72704241 | Msa0223160:CDS |
| CCTAATGTATTGATAGAAGA+AGG | 0.520168 | 2_1:+72704371 | None:intergenic |
| ATCGTTATACCCCGACAACT+TGG | 0.520649 | 2_1:+72706018 | None:intergenic |
| CCCAACAATGACACGAATCA+AGG | 0.522512 | 2_1:-72705507 | Msa0223160:CDS |
| GAAGATAATTCTGTGGGGAA+AGG | 0.524396 | 2_1:-72708043 | Msa0223160:intron |
| CATTACCCTAGTAAAGATAG+AGG | 0.525106 | 2_1:+72704812 | None:intergenic |
| TAAAGTGCCGGCGGCTACGG+TGG | 0.530670 | 2_1:+72706636 | None:intergenic |
| TTTCTCTTGCAATAAAGTGC+CGG | 0.532184 | 2_1:+72706624 | None:intergenic |
| CGAGTTGGTATGATTCTCCA+TGG | 0.533773 | 2_1:-72704995 | Msa0223160:CDS |
| GCCTTCTACTTTAATATGAG+GGG | 0.535220 | 2_1:-72703203 | Msa0223160:exon |
| AAGGAAGAAAGTGAAGCATA+GGG | 0.535836 | 2_1:-72703004 | Msa0223160:three_prime_UTR |
| AACTATTCCTGAAATGGATA+CGG | 0.538330 | 2_1:-72704315 | Msa0223160:CDS |
| AAATCTGAAAAGGTACCAAT+CGG | 0.539431 | 2_1:-72706118 | Msa0223160:CDS |
| TGTTGATGTAAGTAAAGTAA+AGG | 0.539535 | 2_1:-72706152 | Msa0223160:CDS |
| CCTAAACCTATTGGCGCTTG+AGG | 0.542181 | 2_1:+72706049 | None:intergenic |
| CTGATGACGTAAGTAGTGAC+AGG | 0.544616 | 2_1:-72706417 | Msa0223160:CDS |
| GCAGTGACTACTCTACTTCA+AGG | 0.546517 | 2_1:-72705025 | Msa0223160:CDS |
| GGTTCTTTCCCTGTTTGGAG+AGG | 0.549088 | 2_1:-72702946 | Msa0223160:three_prime_UTR |
| ACTAGCTTCATTAGGAAGCT+CGG | 0.549702 | 2_1:+72706510 | None:intergenic |
| TGTTGCCGAAGTTGAAGCAC+TGG | 0.554421 | 2_1:-72704210 | Msa0223160:CDS |
| GATCTTTGAAGATAATTCTG+TGG | 0.555472 | 2_1:-72708050 | Msa0223160:five_prime_UTR |
| ATTCATGCAAAATGTGAGAT+CGG | 0.564599 | 2_1:+72708109 | None:intergenic |
| AATTTCTCATGATAACCAGC+TGG | 0.565236 | 2_1:-72704930 | Msa0223160:CDS |
| ATTTCCATTAGAATTTGAAG+TGG | 0.566306 | 2_1:+72705557 | None:intergenic |
| TCAGGCTTCCAAATTGAGAC+TGG | 0.566330 | 2_1:-72706974 | Msa0223160:intron |
| TCAACATGGATTCGTTAAAG+AGG | 0.566359 | 2_1:-72706560 | Msa0223160:CDS |
| CTTCAAGGTGGATTGCGAGT+TGG | 0.570784 | 2_1:-72705010 | Msa0223160:CDS |
| TCTAATGGAAATATCAGAAG+TGG | 0.571057 | 2_1:-72705546 | Msa0223160:CDS |
| GAGATATGGTGGCGCAGAAG+AGG | 0.575112 | 2_1:-72706888 | Msa0223160:exon |
| CACGATACACTTTCTAACAA+TGG | 0.577025 | 2_1:-72705800 | Msa0223160:intron |
| AGATCCTGGAAAGTCATCCT+TGG | 0.577146 | 2_1:-72705358 | Msa0223160:CDS |
| TGAAGCCCAAAGCATCCAGC+TGG | 0.587306 | 2_1:+72704915 | None:intergenic |
| CAACATGGATTCGTTAAAGA+GGG | 0.588442 | 2_1:-72706559 | Msa0223160:CDS |
| ATATCTCCTCAACAAAGAAG+AGG | 0.590679 | 2_1:-72703333 | Msa0223160:CDS |
| GCAGGATAAATGGAAAACAT+TGG | 0.595370 | 2_1:-72703370 | Msa0223160:intron |
| ACCCTATCCAAAAGTTCTTG+AGG | 0.596914 | 2_1:+72703300 | None:intergenic |
| GCGTGCCACACGATCACCTA+GGG | 0.598126 | 2_1:-72706824 | Msa0223160:intron |
| TTACGATCTAAAGATTCTCA+TGG | 0.598425 | 2_1:-72705315 | Msa0223160:intron |
| TCATCATCTCGGATGCGCAA+AGG | 0.599031 | 2_1:-72705474 | Msa0223160:intron |
| AAAGAACCATAGTGTGAGCA+AGG | 0.599354 | 2_1:+72702961 | None:intergenic |
| ACTTACGTCATCAGAAAGCT+CGG | 0.600372 | 2_1:+72706426 | None:intergenic |
| CTAGGTGATCGTGTGGCACG+CGG | 0.600422 | 2_1:+72706826 | None:intergenic |
| CGGTCAAAATCACTATTCGA+AGG | 0.601638 | 2_1:-72706362 | Msa0223160:CDS |
| GACTGGAGCATGCTGTGTTG+AGG | 0.602494 | 2_1:-72706089 | Msa0223160:CDS |
| TTGCGAAGAATTAGGCTCCA+AGG | 0.603627 | 2_1:+72704892 | None:intergenic |
| AGAAATAGCCTCTCCAAACA+GGG | 0.604751 | 2_1:+72702938 | None:intergenic |
| GCTCCAGTCGCAGTACCGAT+TGG | 0.608866 | 2_1:+72706103 | None:intergenic |
| CTCTTGCAATAAAGTGCCGG+CGG | 0.613646 | 2_1:+72706627 | None:intergenic |
| ATGGAAAACATTGGTACACA+CGG | 0.617941 | 2_1:-72703361 | Msa0223160:CDS |
| ATGAAGCTAGTTGTGACAGA+AGG | 0.618118 | 2_1:-72706498 | Msa0223160:CDS |
| AGAGGCATGTTGTCTGCAGT+AGG | 0.619918 | 2_1:+72704830 | None:intergenic |
| AATCCAATCACACCTGGTGA+CGG | 0.619982 | 2_1:-72706598 | Msa0223160:CDS |
| TATTCCTGAAATGGATACGG+AGG | 0.621261 | 2_1:-72704312 | Msa0223160:CDS |
| GCATGGTTTCTGAGATATGG+TGG | 0.624102 | 2_1:-72706899 | Msa0223160:exon |
| ACATGCCTCTATCTTTACTA+GGG | 0.625348 | 2_1:-72704817 | Msa0223160:intron |
| CAAGTTCTATTTGCTCAGAG+AGG | 0.625767 | 2_1:-72706288 | Msa0223160:CDS |
| TTATTGGCCACCGTAGCCGC+CGG | 0.631400 | 2_1:-72706643 | Msa0223160:CDS |
| AATTGATGGTCACTCATGCA+TGG | 0.632522 | 2_1:-72706323 | Msa0223160:CDS |
| AGAATGACGATATGCTTCCA+AGG | 0.635283 | 2_1:+72705341 | None:intergenic |
| GAATCTTTAGCACATGTGAG+TGG | 0.636250 | 2_1:+72704863 | None:intergenic |
| GGATACATTTCAAAGAAGTG+TGG | 0.637536 | 2_1:-72706692 | Msa0223160:CDS |
| GTGGCAATGCCAAGTTGTCG+GGG | 0.645617 | 2_1:-72706027 | Msa0223160:CDS |
| CAAGCGCCAATAGGTTTAGG+TGG | 0.646070 | 2_1:-72706046 | Msa0223160:CDS |
| CGCGTGCCACACGATCACCT+AGG | 0.652320 | 2_1:-72706825 | Msa0223160:CDS |
| ATTTACCCTAGGTGATCGTG+TGG | 0.652914 | 2_1:+72706819 | None:intergenic |
| TCCACAGAAAGCAGTTATGG+AGG | 0.659363 | 2_1:-72705047 | Msa0223160:intron |
| CTTCCAAATTGAGACTGGCA+GGG | 0.663098 | 2_1:-72706969 | Msa0223160:five_prime_UTR |
| ATTCCTGAAATGGATACGGA+GGG | 0.670098 | 2_1:-72704311 | Msa0223160:CDS |
| AAACAGAATCCAATCACACC+TGG | 0.670956 | 2_1:-72706604 | Msa0223160:CDS |
| ACCAATATGCATGAGCAGTG+AGG | 0.673172 | 2_1:+72703277 | None:intergenic |
| TGGCAGGGTCAAGCAACACG+TGG | 0.689986 | 2_1:-72706954 | Msa0223160:five_prime_UTR |
| AGGAAGAAAGTGAAGCATAG+GGG | 0.691011 | 2_1:-72703003 | Msa0223160:three_prime_UTR |
| ACTACAATCTGGATATCCAG+AGG | 0.693416 | 2_1:+72706189 | None:intergenic |
| GTGACTACTCTACTTCAAGG+TGG | 0.715265 | 2_1:-72705022 | Msa0223160:CDS |
| TCTTTGAAGATAATTCTGTG+GGG | 0.761234 | 2_1:-72708048 | Msa0223160:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTATTTGTGA+TGG | - | chr2_1:72702895-72702914 | Msa0223160:three_prime_UTR | 10.0% |
| !!! | CATAATTTTAAAAAAGAAAA+TGG | + | chr2_1:72703791-72703810 | None:intergenic | 10.0% |
| !! | AATAAATAGATAATAGTAAT+CGG | + | chr2_1:72704270-72704289 | None:intergenic | 10.0% |
| !!! | GAATTTATTTAAAACTTATT+TGG | - | chr2_1:72706927-72706946 | Msa0223160:five_prime_UTR | 10.0% |
| !! | AAAAAAAAATCTATACAAAA+GGG | + | chr2_1:72707212-72707231 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATCTATACAAA+AGG | + | chr2_1:72707213-72707232 | None:intergenic | 10.0% |
| !!! | TGTATAGATTTTTTTTTTAT+TGG | - | chr2_1:72707215-72707234 | Msa0223160:intron | 10.0% |
| !! | AAAAAAAAAAAACTGTTGTT+GGG | - | chr2_1:72703106-72703125 | Msa0223160:three_prime_UTR | 15.0% |
| !!! | TATTTGATCATTTCTTATTT+TGG | - | chr2_1:72704120-72704139 | Msa0223160:intron | 15.0% |
| !!! | TAGAATTTTTCAATTGTATA+TGG | + | chr2_1:72705946-72705965 | None:intergenic | 15.0% |
| !!! | ATCACTTTTTTCTTTTTTTT+GGG | - | chr2_1:72707968-72707987 | Msa0223160:intron | 15.0% |
| !! | ATGTAAAAAATTATAGTACA+AGG | - | chr2_1:72708018-72708037 | Msa0223160:intron | 15.0% |
| !!! | TTTTTTTGTTGAATCTTTGA+TGG | - | chr2_1:72703025-72703044 | Msa0223160:three_prime_UTR | 20.0% |
| !!! | TTTTTTGTTGAATCTTTGAT+GGG | - | chr2_1:72703026-72703045 | Msa0223160:three_prime_UTR | 20.0% |
| !!! | CAAAAAGTTAGCATATTTTA+AGG | + | chr2_1:72703064-72703083 | None:intergenic | 20.0% |
| !! | GAAAAAAAAAAAACTGTTGT+TGG | - | chr2_1:72703105-72703124 | Msa0223160:three_prime_UTR | 20.0% |
| !! | ATACTAAAAAAATAAACCCT+AGG | + | chr2_1:72703713-72703732 | None:intergenic | 20.0% |
| !! | ATGATTACAGATATTATCAA+TGG | - | chr2_1:72703760-72703779 | Msa0223160:intron | 20.0% |
| !! | TTCAAAATTCAAACACATTA+TGG | + | chr2_1:72704024-72704043 | None:intergenic | 20.0% |
| !! | CATTAAAAAAAGTAGTTACA+TGG | + | chr2_1:72704313-72704332 | None:intergenic | 20.0% |
| !!! | TAATATTTTTCATTTCACTG+TGG | + | chr2_1:72704811-72704830 | None:intergenic | 20.0% |
| !! | ATTACTAGTAAAGTTGAATT+AGG | - | chr2_1:72704827-72704846 | Msa0223160:CDS | 20.0% |
| !! | TATACAATTCTTTGATCTAA+AGG | + | chr2_1:72705158-72705177 | None:intergenic | 20.0% |
| !! | TTTAGATCAAAGAATTGTAT+AGG | - | chr2_1:72705157-72705176 | Msa0223160:CDS | 20.0% |
| !!! | GAATATTCATTTGAGATATT+TGG | + | chr2_1:72705431-72705450 | None:intergenic | 20.0% |
| !!! | ATAATTTTATTGTACCTTCA+AGG | + | chr2_1:72705917-72705936 | None:intergenic | 20.0% |
| !! | AAATCAAGAGAATAATATTC+AGG | - | chr2_1:72706533-72706552 | Msa0223160:CDS | 20.0% |
| !! | ACTAACATTTGCATAATATT+TGG | - | chr2_1:72706962-72706981 | Msa0223160:five_prime_UTR | 20.0% |
| !!! | TGATTTTTTTAATGACACAT+TGG | + | chr2_1:72707108-72707127 | None:intergenic | 20.0% |
| !!! | AATGTGTCATTAAAAAAATC+AGG | - | chr2_1:72707107-72707126 | Msa0223160:intron | 20.0% |
| !!! | AATCAACAAAAAAGCATAAA+TGG | + | chr2_1:72707410-72707429 | None:intergenic | 20.0% |
| !! | TAGTATTTCATTGTATCATT+TGG | - | chr2_1:72707590-72707609 | Msa0223160:intron | 20.0% |
| !! | TGTCCTTATAATAGAAAAAA+TGG | - | chr2_1:72707616-72707635 | Msa0223160:intron | 20.0% |
| !!! | CAACCATTTTTTCTATTATA+AGG | + | chr2_1:72707622-72707641 | None:intergenic | 20.0% |
| !! | CTTATAATAGAAAAAATGGT+TGG | - | chr2_1:72707620-72707639 | Msa0223160:intron | 20.0% |
| !!! | CATCACTTTTTTCTTTTTTT+TGG | - | chr2_1:72707967-72707986 | Msa0223160:intron | 20.0% |
| !! | AAATGGTTTATATGCAATAA+AGG | - | chr2_1:72708133-72708152 | Msa0223160:five_prime_UTR | 20.0% |
| !! | AATGGTTTATATGCAATAAA+GGG | - | chr2_1:72708134-72708153 | Msa0223160:five_prime_UTR | 20.0% |
| ! | CATCAAATGAATCGAAATTT+CGG | + | chr2_1:72702961-72702980 | None:intergenic | 25.0% |
| !! | ATCTTTGAAGATAATTCTGT+GGG | - | chr2_1:72702992-72703011 | Msa0223160:three_prime_UTR | 25.0% |
| !!! | TTTTGTTTTGTGTTGTTGTT+TGG | - | chr2_1:72703400-72703419 | Msa0223160:intron | 25.0% |
| ! | TATACCAATTATTACTCCTA+GGG | - | chr2_1:72703694-72703713 | Msa0223160:intron | 25.0% |
| !! | CAGTAATTGTTGTTGAATTT+AGG | - | chr2_1:72703827-72703846 | Msa0223160:intron | 25.0% |
| !! | TTAATGATTTTTCGTAGAAG+AGG | - | chr2_1:72704327-72704346 | Msa0223160:CDS | 25.0% |
| !! | TAATGATTTTTCGTAGAAGA+GGG | - | chr2_1:72704328-72704347 | Msa0223160:CDS | 25.0% |
| ! | TGTTGATGTAAGTAAAGTAA+AGG | - | chr2_1:72704889-72704908 | Msa0223160:CDS | 25.0% |
| ! | TCAAAGAATAAGGAAAAGAT+TGG | - | chr2_1:72705183-72705202 | Msa0223160:CDS | 25.0% |
| !!! | AAAGATTGGCTTCTAAATAT+CGG | - | chr2_1:72705197-72705216 | Msa0223160:CDS | 25.0% |
| !! | TATTTGAAACATGTTAGTTG+TGG | - | chr2_1:72705356-72705375 | Msa0223160:CDS | 25.0% |
| ! | TGAATATTCCTTTCAAAAAG+AGG | - | chr2_1:72705442-72705461 | Msa0223160:intron | 25.0% |
| !! | AAAATCTTCCTCTTTTTGAA+AGG | + | chr2_1:72705453-72705472 | None:intergenic | 25.0% |
| ! | ATTTCCATTAGAATTTGAAG+TGG | + | chr2_1:72705487-72705506 | None:intergenic | 25.0% |
| ! | TAATGAAATGTTCCTATTCA+AGG | - | chr2_1:72705603-72705622 | Msa0223160:CDS | 25.0% |
| !!! | ATATTCTAGTTCAAGTAGTT+GGG | + | chr2_1:72706284-72706303 | None:intergenic | 25.0% |
| !!! | CAGCATATTCTTTTTTTAGT+AGG | + | chr2_1:72706397-72706416 | None:intergenic | 25.0% |
| ! | TTAGGTGAAAAAAGATTGAT+AGG | - | chr2_1:72706688-72706707 | Msa0223160:CDS | 25.0% |
| !! | TAGAACAACTAATTTGCATT+TGG | + | chr2_1:72707342-72707361 | None:intergenic | 25.0% |
| ! | AACTAGCTAGATAGAATATT+AGG | + | chr2_1:72707434-72707453 | None:intergenic | 25.0% |
| ! | AATACAGTATAAGATACTGA+TGG | - | chr2_1:72707534-72707553 | Msa0223160:intron | 25.0% |
| !!! | TATTAGGTATTTGATAATGC+AGG | - | chr2_1:72707653-72707672 | Msa0223160:intron | 25.0% |
| !!! | ATTTGATAATGCAGGATAAA+TGG | - | chr2_1:72707661-72707680 | Msa0223160:intron | 25.0% |
| ! | ACAAAAGAAAAAGTTACCAA+GGG | + | chr2_1:72707932-72707951 | None:intergenic | 25.0% |
| ! | TACAAAAGAAAAAGTTACCA+AGG | + | chr2_1:72707933-72707952 | None:intergenic | 25.0% |
| ATTCATGCAAAATGTGAGAT+CGG | + | chr2_1:72702935-72702954 | None:intergenic | 30.0% | |
| ! | GATCTTTGAAGATAATTCTG+TGG | - | chr2_1:72702991-72703010 | Msa0223160:three_prime_UTR | 30.0% |
| ! | TCTTTGAAGATAATTCTGTG+GGG | - | chr2_1:72702993-72703012 | Msa0223160:three_prime_UTR | 30.0% |
| !! | AGTTGAAATTTTGACGTGTT+TGG | - | chr2_1:72703175-72703194 | Msa0223160:three_prime_UTR | 30.0% |
| TCTTAAACCTCAGAGAAAAA+CGG | + | chr2_1:72703450-72703469 | None:intergenic | 30.0% | |
| !!! | TTTTCTCTGAGGTTTAAGAT+CGG | - | chr2_1:72703451-72703470 | Msa0223160:intron | 30.0% |
| GTATACCAATTATTACTCCT+AGG | - | chr2_1:72703693-72703712 | Msa0223160:intron | 30.0% | |
| TAAACCCTAGGAGTAATAAT+TGG | + | chr2_1:72703701-72703720 | None:intergenic | 30.0% | |
| CTGTAATCATTTCGTCAAAT+GGG | + | chr2_1:72703750-72703769 | None:intergenic | 30.0% | |
| TCTGTAATCATTTCGTCAAA+TGG | + | chr2_1:72703751-72703770 | None:intergenic | 30.0% | |
| TTCAACAACAATTACTGTGA+AGG | + | chr2_1:72703824-72703843 | None:intergenic | 30.0% | |
| ! | TCTGATTTTCTCGCAATTTT+TGG | - | chr2_1:72703868-72703887 | Msa0223160:intron | 30.0% |
| ! | CTGATTTTCTCGCAATTTTT+GGG | - | chr2_1:72703869-72703888 | Msa0223160:intron | 30.0% |
| !!! | GATCATTTCTTATTTTGGCA+TGG | - | chr2_1:72704125-72704144 | Msa0223160:intron | 30.0% |
| AGGATAGATTATGGATTTGT+TGG | - | chr2_1:72704173-72704192 | Msa0223160:intron | 30.0% | |
| TCATCGAAAAAAGATCAACA+TGG | - | chr2_1:72704467-72704486 | Msa0223160:intron | 30.0% | |
| AATTCGCATCTTGAAATTGA+TGG | - | chr2_1:72704704-72704723 | Msa0223160:intron | 30.0% | |
| TGAGCTACAAAAATCTGAAA+AGG | - | chr2_1:72704913-72704932 | Msa0223160:CDS | 30.0% | |
| !! | AAATCTGAAAAGGTACCAAT+CGG | - | chr2_1:72704923-72704942 | Msa0223160:CDS | 30.0% |
| !! | ATGATGACGAAAACTTTTCA+GGG | - | chr2_1:72705104-72705123 | Msa0223160:intron | 30.0% |
| !!! | AGGACTTTGTTTTCAAACTA+GGG | + | chr2_1:72705138-72705157 | None:intergenic | 30.0% |
| !!! | AAGGACTTTGTTTTCAAACT+AGG | + | chr2_1:72705139-72705158 | None:intergenic | 30.0% |
| GTATAGGTGATCAAAGAATA+AGG | - | chr2_1:72705173-72705192 | Msa0223160:CDS | 30.0% | |
| AACTCCACTTCAAATTCTAA+TGG | - | chr2_1:72705480-72705499 | Msa0223160:CDS | 30.0% | |
| TCTAATGGAAATATCAGAAG+TGG | - | chr2_1:72705495-72705514 | Msa0223160:CDS | 30.0% | |
| TTACGATCTAAAGATTCTCA+TGG | - | chr2_1:72705726-72705745 | Msa0223160:intron | 30.0% | |
| CTTGATTGATATCTTCAAAG+AGG | - | chr2_1:72705787-72705806 | Msa0223160:intron | 30.0% | |
| !!! | TGTTTTAATCAGTGAAGCTT+AGG | - | chr2_1:72705830-72705849 | Msa0223160:CDS | 30.0% |
| ! | GATCAAATCATTTAAAGTGC+CGG | - | chr2_1:72705852-72705871 | Msa0223160:CDS | 30.0% |
| AGTAAAACTCTACTTCAAAC+TGG | - | chr2_1:72706088-72706107 | Msa0223160:CDS | 30.0% | |
| AATGCAATCAATTGCAAGTT+AGG | + | chr2_1:72706255-72706274 | None:intergenic | 30.0% | |
| !! | CATATTCTAGTTCAAGTAGT+TGG | + | chr2_1:72706285-72706304 | None:intergenic | 30.0% |
| TTTAATGACAACATCTCCAA+GGG | + | chr2_1:72706449-72706468 | None:intergenic | 30.0% | |
| ! | TTTTAATGACAACATCTCCA+AGG | + | chr2_1:72706450-72706469 | None:intergenic | 30.0% |
| ! | CCTAATGTATTGATAGAAGA+AGG | + | chr2_1:72706673-72706692 | None:intergenic | 30.0% |
| CCTTCTTCTATCAATACATT+AGG | - | chr2_1:72706670-72706689 | Msa0223160:CDS | 30.0% | |
| AGGAATAGTTACAAGTTCTT+TGG | + | chr2_1:72706716-72706735 | None:intergenic | 30.0% | |
| ACTTGTAACTATTCCTGAAA+TGG | - | chr2_1:72706720-72706739 | Msa0223160:intron | 30.0% | |
| AACTATTCCTGAAATGGATA+CGG | - | chr2_1:72706726-72706745 | Msa0223160:intron | 30.0% | |
| ! | GTGTCATTAAAAAAATCAGG+TGG | - | chr2_1:72707110-72707129 | Msa0223160:intron | 30.0% |
| ! | TGTCACACTTTAAGTCATTT+TGG | - | chr2_1:72707279-72707298 | Msa0223160:intron | 30.0% |
| GTTCTATCAAGTCAAGTAAT+TGG | - | chr2_1:72707356-72707375 | Msa0223160:intron | 30.0% | |
| CAAGTAATTGGTTGTGTATT+AGG | - | chr2_1:72707368-72707387 | Msa0223160:intron | 30.0% | |
| TTGCCTTCTACTTTAATATG+AGG | - | chr2_1:72707836-72707855 | Msa0223160:intron | 30.0% | |
| TGCCTTCTACTTTAATATGA+GGG | - | chr2_1:72707837-72707856 | Msa0223160:intron | 30.0% | |
| ATCTACAAAGTCACATCATA+TGG | + | chr2_1:72707881-72707900 | None:intergenic | 30.0% | |
| TATGATGTGACTTTGTAGAT+TGG | - | chr2_1:72707881-72707900 | Msa0223160:intron | 30.0% | |
| !! | GGCTATTTCTTGTAAGTAAA+TGG | - | chr2_1:72708116-72708135 | Msa0223160:five_prime_UTR | 30.0% |
| ATGTGAGATCGGAGTATATT+CGG | + | chr2_1:72702924-72702943 | None:intergenic | 35.0% | |
| ACTGTTGTTGGGTTTATCTT+TGG | - | chr2_1:72703117-72703136 | Msa0223160:three_prime_UTR | 35.0% | |
| CTGTTGTTGGGTTTATCTTT+GGG | - | chr2_1:72703118-72703137 | Msa0223160:three_prime_UTR | 35.0% | |
| TGTTGTTGGGTTTATCTTTG+GGG | - | chr2_1:72703119-72703138 | Msa0223160:three_prime_UTR | 35.0% | |
| !!! | TGACGTGTTTGGTTTTGTTT+TGG | - | chr2_1:72703186-72703205 | Msa0223160:three_prime_UTR | 35.0% |
| !! | TTTGGAAGTGTTTGTTTGTG+TGG | - | chr2_1:72703204-72703223 | Msa0223160:exon | 35.0% |
| AAGTGTTTGTTTGTGTGGTT+GGG | - | chr2_1:72703209-72703228 | Msa0223160:exon | 35.0% | |
| ! | TCTCTGTTTATGCACTCTTT+TGG | - | chr2_1:72703298-72703317 | Msa0223160:CDS | 35.0% |
| ! | ATTTCCATGTTGCTTGTGAT+AGG | - | chr2_1:72703376-72703395 | Msa0223160:intron | 35.0% |
| ! | TTTCCATGTTGCTTGTGATA+GGG | - | chr2_1:72703377-72703396 | Msa0223160:intron | 35.0% |
| !! | TGTGTTGTTGTTTGGTGAAT+TGG | - | chr2_1:72703408-72703427 | Msa0223160:intron | 35.0% |
| AAGAGGACTAAACAAGACAA+AGG | + | chr2_1:72703485-72703504 | None:intergenic | 35.0% | |
| !! | TGTTTCTGGATTCTGTAATC+TGG | - | chr2_1:72703514-72703533 | Msa0223160:intron | 35.0% |
| !!! | TCTGTAATCTGGTCTTGTTT+TGG | - | chr2_1:72703525-72703544 | Msa0223160:intron | 35.0% |
| TTGAAGAAGAACACGAGAAA+GGG | + | chr2_1:72703554-72703573 | None:intergenic | 35.0% | |
| AGATTCAAATGAAGACGCAA+TGG | + | chr2_1:72703664-72703683 | None:intergenic | 35.0% | |
| TCAAACACATTATGGTAAGC+TGG | + | chr2_1:72704016-72704035 | None:intergenic | 35.0% | |
| !! | TTATGGATTTGTTGGCTATC+AGG | - | chr2_1:72704181-72704200 | Msa0223160:intron | 35.0% |
| AAGCAGAATTCATTTACCCT+AGG | + | chr2_1:72704236-72704255 | None:intergenic | 35.0% | |
| AATGAATTCTGCTTCGCTTA+TGG | - | chr2_1:72704242-72704261 | Msa0223160:CDS | 35.0% | |
| GGATACATTTCAAAGAAGTG+TGG | - | chr2_1:72704349-72704368 | Msa0223160:CDS | 35.0% | |
| ! | AATGTGTGCGATTGACTTAT+TGG | - | chr2_1:72704382-72704401 | Msa0223160:CDS | 35.0% |
| TTTCTCTTGCAATAAAGTGC+CGG | + | chr2_1:72704420-72704439 | None:intergenic | 35.0% | |
| TCAACATGGATTCGTTAAAG+AGG | - | chr2_1:72704481-72704500 | Msa0223160:intron | 35.0% | |
| CAACATGGATTCGTTAAAGA+GGG | - | chr2_1:72704482-72704501 | Msa0223160:intron | 35.0% | |
| !! | TGAATGGTTTGTTTGCATCT+AGG | + | chr2_1:72704508-72704527 | None:intergenic | 35.0% |
| !! | GCTTCAACACAGATTTGTTA+AGG | - | chr2_1:72704565-72704584 | Msa0223160:intron | 35.0% |
| !! | ACACAGATTTGTTAAGGAAC+CGG | - | chr2_1:72704571-72704590 | Msa0223160:intron | 35.0% |
| TTCAACGACTTATTTGCATC+CGG | + | chr2_1:72704593-72704612 | None:intergenic | 35.0% | |
| AAAGTTGAATTAGGATCCTC+TGG | - | chr2_1:72704836-72704855 | Msa0223160:CDS | 35.0% | |
| AAGTTGCAATCACTACAATC+TGG | + | chr2_1:72704866-72704885 | None:intergenic | 35.0% | |
| !! | GATGATGACGAAAACTTTTC+AGG | - | chr2_1:72705103-72705122 | Msa0223160:intron | 35.0% |
| CACGATACACTTTCTAACAA+TGG | - | chr2_1:72705241-72705260 | Msa0223160:intron | 35.0% | |
| AAGTGACAAAACAAGAAAGC+AGG | + | chr2_1:72705298-72705317 | None:intergenic | 35.0% | |
| GTGTTTCTTGTTCATCATCT+CGG | - | chr2_1:72705556-72705575 | Msa0223160:CDS | 35.0% | |
| TTAAGTACAGTGCCTTGAAT+AGG | + | chr2_1:72705618-72705637 | None:intergenic | 35.0% | |
| GGAATCTCAATAAAAAGCTC+CGG | + | chr2_1:72705874-72705893 | None:intergenic | 35.0% | |
| ! | CTGCAGCTCTTACAAAATTT+TGG | - | chr2_1:72705971-72705990 | Msa0223160:CDS | 35.0% |
| CATCTCTAAGTTTCTTTCCA+TGG | + | chr2_1:72706066-72706085 | None:intergenic | 35.0% | |
| AATTTCTCATGATAACCAGC+TGG | - | chr2_1:72706111-72706130 | Msa0223160:CDS | 35.0% | |
| AACATGCCTCTATCTTTACT+AGG | - | chr2_1:72706223-72706242 | Msa0223160:CDS | 35.0% | |
| ACATGCCTCTATCTTTACTA+GGG | - | chr2_1:72706224-72706243 | Msa0223160:CDS | 35.0% | |
| CATTACCCTAGTAAAGATAG+AGG | + | chr2_1:72706232-72706251 | None:intergenic | 35.0% | |
| TCAGAGAAACCATGAATCAT+CGG | + | chr2_1:72706592-72706611 | None:intergenic | 35.0% | |
| !!! | CTTTTGATGATGCAAAGCAT+AGG | - | chr2_1:72707152-72707171 | Msa0223160:intron | 35.0% |
| TAGGACATATGTGGATTTGA+AGG | - | chr2_1:72707171-72707190 | Msa0223160:intron | 35.0% | |
| !! | CACACTTTAAGTCATTTTGG+TGG | - | chr2_1:72707282-72707301 | Msa0223160:intron | 35.0% |
| GGTTGGCATGTGATAATATT+AGG | - | chr2_1:72707637-72707656 | Msa0223160:intron | 35.0% | |
| GCAGGATAAATGGAAAACAT+TGG | - | chr2_1:72707671-72707690 | Msa0223160:intron | 35.0% | |
| ATGGAAAACATTGGTACACA+CGG | - | chr2_1:72707680-72707699 | Msa0223160:intron | 35.0% | |
| ATATCTCCTCAACAAAGAAG+AGG | - | chr2_1:72707708-72707727 | Msa0223160:intron | 35.0% | |
| ! | TTCCTCAAGAACTTTTGGAT+AGG | - | chr2_1:72707739-72707758 | Msa0223160:intron | 35.0% |
| ! | TCCTCAAGAACTTTTGGATA+GGG | - | chr2_1:72707740-72707759 | Msa0223160:intron | 35.0% |
| !! | TTGCTTTGTTTGTTGCTGTT+GGG | + | chr2_1:72707790-72707809 | None:intergenic | 35.0% |
| AAAGTAGAAGGCAAGTTTCA+GGG | + | chr2_1:72707830-72707849 | None:intergenic | 35.0% | |
| TAAAGTAGAAGGCAAGTTTC+AGG | + | chr2_1:72707831-72707850 | None:intergenic | 35.0% | |
| GCCTTCTACTTTAATATGAG+GGG | - | chr2_1:72707838-72707857 | Msa0223160:intron | 35.0% | |
| CCTTCTACTTTAATATGAGG+GGG | - | chr2_1:72707839-72707858 | Msa0223160:intron | 35.0% | |
| ! | TGTGACTTTGTAGATTGGTT+TGG | - | chr2_1:72707886-72707905 | Msa0223160:intron | 35.0% |
| !! | CTTTGTAGATTGGTTTGGTT+AGG | - | chr2_1:72707891-72707910 | Msa0223160:intron | 35.0% |
| !! | ATTGGTTTGGTTAGGTGTTA+AGG | - | chr2_1:72707899-72707918 | Msa0223160:intron | 35.0% |
| AAGGAAGAAAGTGAAGCATA+GGG | - | chr2_1:72708037-72708056 | Msa0223160:intron | 35.0% | |
| GAAGATAATTCTGTGGGGAA+AGG | - | chr2_1:72702998-72703017 | Msa0223160:three_prime_UTR | 40.0% | |
| ! | GAAGTGTTTGTTTGTGTGGT+TGG | - | chr2_1:72703208-72703227 | Msa0223160:exon | 40.0% |
| AGTGTTTGTTTGTGTGGTTG+GGG | - | chr2_1:72703210-72703229 | Msa0223160:exon | 40.0% | |
| ! | GCACGTGAGTTTTCAGTTTT+CGG | - | chr2_1:72703232-72703251 | Msa0223160:CDS | 40.0% |
| AAACCCTATCACAAGCAACA+TGG | + | chr2_1:72703383-72703402 | None:intergenic | 40.0% | |
| CAGAAACATTCACGAGAAAG+AGG | + | chr2_1:72703502-72703521 | None:intergenic | 40.0% | |
| CTCTTTCTCGTGAATGTTTC+TGG | - | chr2_1:72703500-72703519 | Msa0223160:intron | 40.0% | |
| CTTGAAGAAGAACACGAGAA+AGG | + | chr2_1:72703555-72703574 | None:intergenic | 40.0% | |
| AGGAAATATCTTACATGGGG+AGG | + | chr2_1:72703899-72703918 | None:intergenic | 40.0% | |
| GCGAGGAAATATCTTACATG+GGG | + | chr2_1:72703902-72703921 | None:intergenic | 40.0% | |
| GGCGAGGAAATATCTTACAT+GGG | + | chr2_1:72703903-72703922 | None:intergenic | 40.0% | |
| !! | GGAGGGAAACAATGGATTAA+TGG | - | chr2_1:72703937-72703956 | Msa0223160:intron | 40.0% |
| GCGTTTGTGTGTTTAATGTC+AGG | - | chr2_1:72704049-72704068 | Msa0223160:intron | 40.0% | |
| !! | TTGGCATGGTTTCTGAGATA+TGG | - | chr2_1:72704139-72704158 | Msa0223160:intron | 40.0% |
| AAACAGAATCCAATCACACC+TGG | - | chr2_1:72704437-72704456 | Msa0223160:intron | 40.0% | |
| ! | ACTAGCTTCATTAGGAAGCT+CGG | + | chr2_1:72704534-72704553 | None:intergenic | 40.0% |
| ! | CTGTCACAACTAGCTTCATT+AGG | + | chr2_1:72704542-72704561 | None:intergenic | 40.0% |
| ATGAAGCTAGTTGTGACAGA+AGG | - | chr2_1:72704543-72704562 | Msa0223160:intron | 40.0% | |
| ACTTACGTCATCAGAAAGCT+CGG | + | chr2_1:72704618-72704637 | None:intergenic | 40.0% | |
| !!! | TTTCTCTGCTTTTTCTTCGC+AGG | - | chr2_1:72704652-72704671 | Msa0223160:intron | 40.0% |
| CGGTCAAAATCACTATTCGA+AGG | - | chr2_1:72704679-72704698 | Msa0223160:intron | 40.0% | |
| ! | AATTGATGGTCACTCATGCA+TGG | - | chr2_1:72704718-72704737 | Msa0223160:intron | 40.0% |
| CAAGTTCTATTTGCTCAGAG+AGG | - | chr2_1:72704753-72704772 | Msa0223160:intron | 40.0% | |
| TTCTATTTGCTCAGAGAGGT+TGG | - | chr2_1:72704757-72704776 | Msa0223160:intron | 40.0% | |
| ACTACAATCTGGATATCCAG+AGG | + | chr2_1:72704855-72704874 | None:intergenic | 40.0% | |
| ATGCTGTGTTGAGGAACTAA+TGG | - | chr2_1:72704961-72704980 | Msa0223160:CDS | 40.0% | |
| CGAACAAGCAAAAAGAAGCA+CGG | + | chr2_1:72705322-72705341 | None:intergenic | 40.0% | |
| ! | CCTTGATTCGTGTCATTGTT+GGG | + | chr2_1:72705537-72705556 | None:intergenic | 40.0% |
| ! | ACCTTGATTCGTGTCATTGT+TGG | + | chr2_1:72705538-72705557 | None:intergenic | 40.0% |
| CAGGATCTGCAACAAAGATT+TGG | + | chr2_1:72705671-72705690 | None:intergenic | 40.0% | |
| CAAATCTTTGTTGCAGATCC+TGG | - | chr2_1:72705669-72705688 | Msa0223160:CDS | 40.0% | |
| AGAATGACGATATGCTTCCA+AGG | + | chr2_1:72705703-72705722 | None:intergenic | 40.0% | |
| TCATGGTATGCGAAGATTGA+GGG | - | chr2_1:72705743-72705762 | Msa0223160:intron | 40.0% | |
| GGTAAGCTTTGCGAAGAATT+AGG | + | chr2_1:72706160-72706179 | None:intergenic | 40.0% | |
| GAATCTTTAGCACATGTGAG+TGG | + | chr2_1:72706181-72706200 | None:intergenic | 40.0% | |
| ATATGCTGTGTCAGTACCAT+CGG | - | chr2_1:72706300-72706319 | Msa0223160:CDS | 40.0% | |
| ! | ATGCTGTATCAGTGTTTCTG+TGG | - | chr2_1:72706411-72706430 | Msa0223160:CDS | 40.0% |
| GTGGATATCTCAATTTCCCT+TGG | - | chr2_1:72706430-72706449 | Msa0223160:CDS | 40.0% | |
| AAACCATGAATCATCGGAGT+CGG | + | chr2_1:72706586-72706605 | None:intergenic | 40.0% | |
| TTCAACAATGTTGCCTAACC+TGG | + | chr2_1:72706632-72706651 | None:intergenic | 40.0% | |
| TATTCCTGAAATGGATACGG+AGG | - | chr2_1:72706729-72706748 | Msa0223160:intron | 40.0% | |
| ATTCCTGAAATGGATACGGA+GGG | - | chr2_1:72706730-72706749 | Msa0223160:intron | 40.0% | |
| TCAACTTCGGCAACAGAAAA+AGG | + | chr2_1:72706826-72706845 | None:intergenic | 40.0% | |
| TTCAACCAGTGCTTCAACTT+CGG | + | chr2_1:72706839-72706858 | None:intergenic | 40.0% | |
| AATTAGTAGAGCCATGCACA+CGG | + | chr2_1:72707083-72707102 | None:intergenic | 40.0% | |
| TGCAAAGCATAGGACATATG+TGG | - | chr2_1:72707162-72707181 | Msa0223160:intron | 40.0% | |
| TCCAAAAGTTCTTGAGGAAC+AGG | + | chr2_1:72707738-72707757 | None:intergenic | 40.0% | |
| ACCCTATCCAAAAGTTCTTG+AGG | + | chr2_1:72707744-72707763 | None:intergenic | 40.0% | |
| !! | GTTGCTTTGTTTGTTGCTGT+TGG | + | chr2_1:72707791-72707810 | None:intergenic | 40.0% |
| CCCCCTCATATTAAAGTAGA+AGG | + | chr2_1:72707842-72707861 | None:intergenic | 40.0% | |
| CAAGGAAGAAAGTGAAGCAT+AGG | - | chr2_1:72708036-72708055 | Msa0223160:intron | 40.0% | |
| AGGAAGAAAGTGAAGCATAG+GGG | - | chr2_1:72708038-72708057 | Msa0223160:intron | 40.0% | |
| CATTATCCTTGCTCACACTA+TGG | - | chr2_1:72708074-72708093 | Msa0223160:five_prime_UTR | 40.0% | |
| AAAGAACCATAGTGTGAGCA+AGG | + | chr2_1:72708083-72708102 | None:intergenic | 40.0% | |
| ACTATGGTTCTTTCCCTGTT+TGG | - | chr2_1:72708090-72708109 | Msa0223160:five_prime_UTR | 40.0% | |
| AGAAATAGCCTCTCCAAACA+GGG | + | chr2_1:72708106-72708125 | None:intergenic | 40.0% | |
| AAGAAATAGCCTCTCCAAAC+AGG | + | chr2_1:72708107-72708126 | None:intergenic | 40.0% | |
| !! | GTGAGATCCGTTTTTCTCTG+AGG | - | chr2_1:72703440-72703459 | Msa0223160:intron | 45.0% |
| GGGCGAGGAAATATCTTACA+TGG | + | chr2_1:72703904-72703923 | None:intergenic | 45.0% | |
| TCAGGCTTCCAAATTGAGAC+TGG | - | chr2_1:72704067-72704086 | Msa0223160:intron | 45.0% | |
| CTTCCAAATTGAGACTGGCA+GGG | - | chr2_1:72704072-72704091 | Msa0223160:intron | 45.0% | |
| !! | GCATGGTTTCTGAGATATGG+TGG | - | chr2_1:72704142-72704161 | Msa0223160:intron | 45.0% |
| GCGCAGAAGAGGATAGATTA+TGG | - | chr2_1:72704164-72704183 | Msa0223160:intron | 45.0% | |
| ATTTACCCTAGGTGATCGTG+TGG | + | chr2_1:72704225-72704244 | None:intergenic | 45.0% | |
| AATCCAATCACACCTGGTGA+CGG | - | chr2_1:72704443-72704462 | Msa0223160:intron | 45.0% | |
| !! | TTTTTCGATGATCCGTCACC+AGG | + | chr2_1:72704458-72704477 | None:intergenic | 45.0% |
| !! | TTAGGAAGCTCGGCTTTGAA+TGG | + | chr2_1:72704524-72704543 | None:intergenic | 45.0% |
| ! | CTGATGACGTAAGTAGTGAC+AGG | - | chr2_1:72704624-72704643 | Msa0223160:intron | 45.0% |
| !! | GCTTTTTCTTCGCAGGTGTA+CGG | - | chr2_1:72704659-72704678 | Msa0223160:intron | 45.0% |
| GAAAAACCTCAAGCGCCAAT+AGG | - | chr2_1:72704986-72705005 | Msa0223160:CDS | 45.0% | |
| GCATTGCCACCTAAACCTAT+TGG | + | chr2_1:72705004-72705023 | None:intergenic | 45.0% | |
| ATCGTTATACCCCGACAACT+TGG | + | chr2_1:72705026-72705045 | None:intergenic | 45.0% | |
| CCTTTGAACAACGAGCTACT+AGG | + | chr2_1:72705055-72705074 | None:intergenic | 45.0% | |
| CCTAGTAGCTCGTTGTTCAA+AGG | - | chr2_1:72705052-72705071 | Msa0223160:intron | 45.0% | |
| CCCAACAATGACACGAATCA+AGG | - | chr2_1:72705534-72705553 | Msa0223160:CDS | 45.0% | |
| AGATCCTGGAAAGTCATCCT+TGG | - | chr2_1:72705683-72705702 | Msa0223160:intron | 45.0% | |
| CTCATGGTATGCGAAGATTG+AGG | - | chr2_1:72705742-72705761 | Msa0223160:intron | 45.0% | |
| GAAGCAACAGTTGCAGTTTC+AGG | + | chr2_1:72705895-72705914 | None:intergenic | 45.0% | |
| ! | TGCAACTGTTGCTTCCTTGA+AGG | - | chr2_1:72705900-72705919 | Msa0223160:CDS | 45.0% |
| TGGTCCACAGAAAGCAGTTA+TGG | - | chr2_1:72705991-72706010 | Msa0223160:CDS | 45.0% | |
| TCCACAGAAAGCAGTTATGG+AGG | - | chr2_1:72705994-72706013 | Msa0223160:CDS | 45.0% | |
| GCAGTGACTACTCTACTTCA+AGG | - | chr2_1:72706016-72706035 | Msa0223160:CDS | 45.0% | |
| GTGACTACTCTACTTCAAGG+TGG | - | chr2_1:72706019-72706038 | Msa0223160:CDS | 45.0% | |
| !! | CGAGTTGGTATGATTCTCCA+TGG | - | chr2_1:72706046-72706065 | Msa0223160:CDS | 45.0% |
| TGATAACCAGCTGGATGCTT+TGG | - | chr2_1:72706120-72706139 | Msa0223160:CDS | 45.0% | |
| GATAACCAGCTGGATGCTTT+GGG | - | chr2_1:72706121-72706140 | Msa0223160:CDS | 45.0% | |
| TTGCGAAGAATTAGGCTCCA+AGG | + | chr2_1:72706152-72706171 | None:intergenic | 45.0% | |
| TATGCTGTGTCAGTACCATC+GGG | - | chr2_1:72706301-72706320 | Msa0223160:CDS | 45.0% | |
| TTGACAACACACACACACTG+CGG | + | chr2_1:72706352-72706371 | None:intergenic | 45.0% | |
| TGTGTGTGTTGTCAACCCTA+AGG | - | chr2_1:72706357-72706376 | Msa0223160:CDS | 45.0% | |
| TGTTGTCAACCCTAAGGTAC+TGG | - | chr2_1:72706363-72706382 | Msa0223160:CDS | 45.0% | |
| ! | GTTGTCAACCCTAAGGTACT+GGG | - | chr2_1:72706364-72706383 | Msa0223160:CDS | 45.0% |
| GAGCATCAAGTAACCAGGTT+AGG | - | chr2_1:72706616-72706635 | Msa0223160:CDS | 45.0% | |
| TGTGAGATCTCAGTTCGCTT+TGG | + | chr2_1:72706784-72706803 | None:intergenic | 45.0% | |
| CAGAAAAAGGCCTGCGAATT+CGG | + | chr2_1:72706813-72706832 | None:intergenic | 45.0% | |
| ACGGTCGATTAAGGACTCAT+TGG | + | chr2_1:72707064-72707083 | None:intergenic | 45.0% | |
| ! | GCCTGTTCCTCAAGAACTTT+TGG | - | chr2_1:72707734-72707753 | Msa0223160:intron | 45.0% |
| TCCTCACTGCTCATGCATAT+TGG | - | chr2_1:72707763-72707782 | Msa0223160:intron | 45.0% | |
| ACCAATATGCATGAGCAGTG+AGG | + | chr2_1:72707767-72707786 | None:intergenic | 45.0% | |
| GTGTTAAGGTTTCTGACCCT+TGG | - | chr2_1:72707913-72707932 | Msa0223160:intron | 45.0% | |
| TATTTCCTCGCCCTCAAGCA+TGG | - | chr2_1:72703911-72703930 | Msa0223160:intron | 50.0% | |
| GCTTCCAAATTGAGACTGGC+AGG | - | chr2_1:72704071-72704090 | Msa0223160:intron | 50.0% | |
| TGACCCTGCCAGTCTCAATT+TGG | + | chr2_1:72704078-72704097 | None:intergenic | 50.0% | |
| !! | CTCTTGCAATAAAGTGCCGG+CGG | + | chr2_1:72704417-72704436 | None:intergenic | 50.0% |
| !! | GAGGTTGGTTGCTGACGTTT+TGG | - | chr2_1:72704772-72704791 | Msa0223160:intron | 50.0% |
| ! | GTTGGTTGCTGACGTTTTGG+TGG | - | chr2_1:72704775-72704794 | Msa0223160:intron | 50.0% |
| CCTAAACCTATTGGCGCTTG+AGG | + | chr2_1:72704995-72705014 | None:intergenic | 50.0% | |
| CCTCAAGCGCCAATAGGTTT+AGG | - | chr2_1:72704992-72705011 | Msa0223160:CDS | 50.0% | |
| CAAGCGCCAATAGGTTTAGG+TGG | - | chr2_1:72704995-72705014 | Msa0223160:CDS | 50.0% | |
| AGGTGGCAATGCCAAGTTGT+CGG | - | chr2_1:72705012-72705031 | Msa0223160:CDS | 50.0% | |
| TCATCATCTCGGATGCGCAA+AGG | - | chr2_1:72705567-72705586 | Msa0223160:CDS | 50.0% | |
| GCTTCCAAGGATGACTTTCC+AGG | + | chr2_1:72705690-72705709 | None:intergenic | 50.0% | |
| GCCTCCATAACTGCTTTCTG+TGG | + | chr2_1:72705998-72706017 | None:intergenic | 50.0% | |
| !! | CTTCAAGGTGGATTGCGAGT+TGG | - | chr2_1:72706031-72706050 | Msa0223160:CDS | 50.0% |
| ! | AGAGGCATGTTGTCTGCAGT+AGG | + | chr2_1:72706214-72706233 | None:intergenic | 50.0% |
| GGAGTCGGATGAAGTACAGA+TGG | + | chr2_1:72706571-72706590 | None:intergenic | 50.0% | |
| CATCCGACTCCGATGATTCA+TGG | - | chr2_1:72706580-72706599 | Msa0223160:CDS | 50.0% | |
| ACGCTGAGCATCAAGTAACC+AGG | - | chr2_1:72706611-72706630 | Msa0223160:CDS | 50.0% | |
| AGTCCCTCCGTATCCATTTC+AGG | + | chr2_1:72706736-72706755 | None:intergenic | 50.0% | |
| ! | TCTCAGTTCGCTTTGGCTTC+TGG | + | chr2_1:72706777-72706796 | None:intergenic | 50.0% |
| AAAAAGGCCTGCGAATTCGG+CGG | + | chr2_1:72706810-72706829 | None:intergenic | 50.0% | |
| TGTTGCCGAAGTTGAAGCAC+TGG | - | chr2_1:72706831-72706850 | Msa0223160:CDS | 50.0% | |
| TCCAGTTCCAAGTCTCTCGA+CGG | + | chr2_1:72706863-72706882 | None:intergenic | 50.0% | |
| TCGAGAGACTTGGAACTGGA+AGG | - | chr2_1:72706863-72706882 | Msa0223160:CDS | 50.0% | |
| TCCTTAATCGACCGTGTGCA+TGG | - | chr2_1:72707069-72707088 | Msa0223160:intron | 50.0% | |
| GGCTCACCTCTTCTTTGTTG+AGG | + | chr2_1:72707717-72707736 | None:intergenic | 50.0% | |
| GGTTCTTTCCCTGTTTGGAG+AGG | - | chr2_1:72708095-72708114 | Msa0223160:five_prime_UTR | 50.0% | |
| CATGGCTGGGAGGGAAACAA+TGG | - | chr2_1:72703929-72703948 | Msa0223160:intron | 55.0% | |
| ! | GAGATATGGTGGCGCAGAAG+AGG | - | chr2_1:72704153-72704172 | Msa0223160:intron | 55.0% |
| !! | CAATAAAGTGCCGGCGGCTA+CGG | + | chr2_1:72704411-72704430 | None:intergenic | 55.0% |
| GATCCGTCACCAGGTGTGAT+TGG | + | chr2_1:72704449-72704468 | None:intergenic | 55.0% | |
| GTACCAATCGGTACTGCGAC+TGG | - | chr2_1:72704935-72704954 | Msa0223160:CDS | 55.0% | |
| GACTGGAGCATGCTGTGTTG+AGG | - | chr2_1:72704952-72704971 | Msa0223160:CDS | 55.0% | |
| GGTGGCAATGCCAAGTTGTC+GGG | - | chr2_1:72705013-72705032 | Msa0223160:CDS | 55.0% | |
| GTGGCAATGCCAAGTTGTCG+GGG | - | chr2_1:72705014-72705033 | Msa0223160:CDS | 55.0% | |
| ! | TGAAGCCCAAAGCATCCAGC+TGG | + | chr2_1:72706129-72706148 | None:intergenic | 55.0% |
| ! | GGATGCTTTGGGCTTCACCT+TGG | - | chr2_1:72706132-72706151 | Msa0223160:CDS | 55.0% |
| CGGTACGCACCAACCACTTA+CGG | + | chr2_1:72706332-72706351 | None:intergenic | 55.0% | |
| !! | CGCTTTGGCTTCTGGTTCAC+TGG | + | chr2_1:72706769-72706788 | None:intergenic | 55.0% |
| GTTGAAGCCGTCGAGAGACT+TGG | - | chr2_1:72706853-72706872 | Msa0223160:CDS | 55.0% | |
| GCCATGCACACGGTCGATTA+AGG | + | chr2_1:72707073-72707092 | None:intergenic | 55.0% | |
| TCCCTCCCAGCCATGCTTGA+GGG | + | chr2_1:72703924-72703943 | None:intergenic | 60.0% | |
| TTCCCTCCCAGCCATGCTTG+AGG | + | chr2_1:72703925-72703944 | None:intergenic | 60.0% | |
| TGGCAGGGTCAAGCAACACG+TGG | - | chr2_1:72704087-72704106 | Msa0223160:intron | 60.0% | |
| CTAGGTGATCGTGTGGCACG+CGG | + | chr2_1:72704218-72704237 | None:intergenic | 60.0% | |
| GCGTGCCACACGATCACCTA+GGG | - | chr2_1:72704217-72704236 | Msa0223160:CDS | 60.0% | |
| TTATTGGCCACCGTAGCCGC+CGG | - | chr2_1:72704398-72704417 | Msa0223160:CDS | 60.0% | |
| !! | GCTCCAGTCGCAGTACCGAT+TGG | + | chr2_1:72704941-72704960 | None:intergenic | 60.0% |
| CCACTTACGGCAGAACCCGA+TGG | + | chr2_1:72706319-72706338 | None:intergenic | 60.0% | |
| CCATCGGGTTCTGCCGTAAG+TGG | - | chr2_1:72706316-72706335 | Msa0223160:CDS | 60.0% | |
| CGGGTTCTGCCGTAAGTGGT+TGG | - | chr2_1:72706320-72706339 | Msa0223160:CDS | 60.0% | |
| GCCGTCGAGAGACTTGGAAC+TGG | - | chr2_1:72706859-72706878 | Msa0223160:CDS | 60.0% | |
| TCCTCGCCCTCAAGCATGGC+TGG | - | chr2_1:72703915-72703934 | Msa0223160:intron | 65.0% | |
| CCTCGCCCTCAAGCATGGCT+GGG | - | chr2_1:72703916-72703935 | Msa0223160:intron | 65.0% | |
| GCCCTCAAGCATGGCTGGGA+GGG | - | chr2_1:72703920-72703939 | Msa0223160:intron | 65.0% | |
| ! | CGTGTGGCACGCGGCTTTGT+TGG | + | chr2_1:72704209-72704228 | None:intergenic | 65.0% |
| CGCGTGCCACACGATCACCT+AGG | - | chr2_1:72704216-72704235 | Msa0223160:CDS | 65.0% | |
| !! | TAAAGTGCCGGCGGCTACGG+TGG | + | chr2_1:72704408-72704427 | None:intergenic | 65.0% |
| CACAACGCCGCCGAATTCGC+AGG | - | chr2_1:72706800-72706819 | Msa0223160:intron | 65.0% | |
| CCCAGCCATGCTTGAGGGCG+AGG | + | chr2_1:72703919-72703938 | None:intergenic | 70.0% | |
| CGCCCTCAAGCATGGCTGGG+AGG | - | chr2_1:72703919-72703938 | Msa0223160:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 72702888 | 72708175 | 72702888 | ID=Msa0223160;Name=Msa0223160 |
| chr2_1 | mRNA | 72702888 | 72708175 | 72702888 | ID=Msa0223160-mRNA-1;Parent=Msa0223160;Name=Msa0223160-mRNA-1;_AED=0.13;_eAED=0.13;_QI=219|0.75|0.88|1|0.87|0.77|9|324|669 |
| chr2_1 | exon | 72702888 | 72703388 | 72702888 | ID=Msa0223160-mRNA-1:exon:21075;Parent=Msa0223160-mRNA-1 |
| chr2_1 | exon | 72704202 | 72704430 | 72704202 | ID=Msa0223160-mRNA-1:exon:21074;Parent=Msa0223160-mRNA-1 |
| chr2_1 | exon | 72704818 | 72705062 | 72704818 | ID=Msa0223160-mRNA-1:exon:21073;Parent=Msa0223160-mRNA-1 |
| chr2_1 | exon | 72705142 | 72705221 | 72705142 | ID=Msa0223160-mRNA-1:exon:21072;Parent=Msa0223160-mRNA-1 |
| chr2_1 | exon | 72705316 | 72705378 | 72705316 | ID=Msa0223160-mRNA-1:exon:21071;Parent=Msa0223160-mRNA-1 |
| chr2_1 | exon | 72705475 | 72705690 | 72705475 | ID=Msa0223160-mRNA-1:exon:21070;Parent=Msa0223160-mRNA-1 |
| chr2_1 | exon | 72705801 | 72706719 | 72705801 | ID=Msa0223160-mRNA-1:exon:21069;Parent=Msa0223160-mRNA-1 |
| chr2_1 | exon | 72706825 | 72706992 | 72706825 | ID=Msa0223160-mRNA-1:exon:21068;Parent=Msa0223160-mRNA-1 |
| chr2_1 | exon | 72708044 | 72708175 | 72708044 | ID=Msa0223160-mRNA-1:exon:21067;Parent=Msa0223160-mRNA-1 |
| chr2_1 | five_prime_UTR | 72708044 | 72708175 | 72708044 | ID=Msa0223160-mRNA-1:five_prime_utr;Parent=Msa0223160-mRNA-1 |
| chr2_1 | five_prime_UTR | 72706906 | 72706992 | 72706906 | ID=Msa0223160-mRNA-1:five_prime_utr;Parent=Msa0223160-mRNA-1 |
| chr2_1 | CDS | 72706825 | 72706905 | 72706825 | ID=Msa0223160-mRNA-1:cds;Parent=Msa0223160-mRNA-1 |
| chr2_1 | CDS | 72705801 | 72706719 | 72705801 | ID=Msa0223160-mRNA-1:cds;Parent=Msa0223160-mRNA-1 |
| chr2_1 | CDS | 72705475 | 72705690 | 72705475 | ID=Msa0223160-mRNA-1:cds;Parent=Msa0223160-mRNA-1 |
| chr2_1 | CDS | 72705316 | 72705378 | 72705316 | ID=Msa0223160-mRNA-1:cds;Parent=Msa0223160-mRNA-1 |
| chr2_1 | CDS | 72705142 | 72705221 | 72705142 | ID=Msa0223160-mRNA-1:cds;Parent=Msa0223160-mRNA-1 |
| chr2_1 | CDS | 72704818 | 72705062 | 72704818 | ID=Msa0223160-mRNA-1:cds;Parent=Msa0223160-mRNA-1 |
| chr2_1 | CDS | 72704202 | 72704430 | 72704202 | ID=Msa0223160-mRNA-1:cds;Parent=Msa0223160-mRNA-1 |
| chr2_1 | CDS | 72703212 | 72703388 | 72703212 | ID=Msa0223160-mRNA-1:cds;Parent=Msa0223160-mRNA-1 |
| chr2_1 | three_prime_UTR | 72702888 | 72703211 | 72702888 | ID=Msa0223160-mRNA-1:three_prime_utr;Parent=Msa0223160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
