AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0373330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0373330 MtrunA17_Chr5g0446951 94.667 75 4 0 1 75 85 159 4.96e-43 147
Msa0373330 MtrunA17_Chr5g0446941 94.667 75 4 0 1 75 85 159 4.96e-43 147
Msa0373330 MtrunA17_Chr6g0469201 92.000 75 6 0 1 75 85 159 4.60e-42 144
Msa0373330 MtrunA17_Chr1g0202601 92.000 75 6 0 1 75 90 164 5.56e-42 144
Msa0373330 MtrunA17_Chr1g0156731 60.000 75 30 0 1 75 160 234 1.36e-26 101
Msa0373330 MtrunA17_Chr5g0447581 53.247 77 31 2 1 72 170 246 2.34e-20 83.6
Msa0373330 MtrunA17_Chr5g0420861 50.000 82 35 3 1 76 162 243 3.64e-19 80.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0373330 AT5G56030.1 92.000 75 6 0 1 75 85 159 3.28e-42 145
Msa0373330 AT5G56010.1 92.000 75 6 0 1 75 85 159 3.45e-42 145
Msa0373330 AT5G56000.1 92.000 75 6 0 1 75 85 159 3.70e-42 145
Msa0373330 AT5G56030.2 92.000 75 6 0 1 75 114 188 4.11e-42 145
Msa0373330 AT5G52640.1 92.000 75 6 0 1 75 85 159 7.25e-42 144
Msa0373330 AT4G24190.1 60.000 75 30 0 1 75 159 233 1.23e-26 101
Msa0373330 AT4G24190.2 60.000 75 30 0 1 75 159 233 1.23e-26 101
Msa0373330 AT3G07770.1 53.659 82 32 3 1 76 175 256 1.16e-20 84.7
Msa0373330 AT3G07770.3 53.659 82 32 3 1 76 175 256 1.16e-20 84.7
Msa0373330 AT3G07770.2 53.659 82 32 3 1 76 175 256 1.16e-20 84.7
Msa0373330 AT2G04030.2 55.844 77 29 2 1 72 157 233 3.55e-20 83.6
Msa0373330 AT2G04030.1 55.844 77 29 2 1 72 157 233 3.55e-20 83.6

Find 101 sgRNAs with CRISPR-Local

Find 540 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATCTTTCTCCTTTCTAT+TGG 0.248441 3_1:-72348970 None:intergenic
CCCAACTAATGACACAAATT+TGG 0.248709 3_1:+72349562 Msa0373330:three_prime_UTR
TTGGGTGTTGGTTCTCAATT+GGG 0.265674 3_1:+72348482 Msa0373330:three_prime_UTR
AATGGTAAAAGTTGTCTAAA+TGG 0.266061 3_1:+72348317 Msa0373330:three_prime_UTR
TTGTCAATTTGTTCAACTTT+AGG 0.267025 3_1:-72349500 None:intergenic
TTACTAGAACTTTAACCTTT+TGG 0.267313 3_1:+72349648 Msa0373330:three_prime_UTR
GTAGCATATGTTTGTATTCT+CGG 0.268157 3_1:+72348435 Msa0373330:three_prime_UTR
TTTGGGTGTTGGTTCTCAAT+TGG 0.268754 3_1:+72348481 Msa0373330:three_prime_UTR
ATTAAATGCACTATATAAAA+TGG 0.307899 3_1:-72348680 None:intergenic
TCCAAATTTGTGTCATTAGT+TGG 0.309488 3_1:-72349563 None:intergenic
TAGTAGGCGTAGGAGGTATT+TGG 0.311903 3_1:+72349168 Msa0373330:three_prime_UTR
GGACTGTACAATGATGAATT+TGG 0.332887 3_1:+72348812 Msa0373330:three_prime_UTR
ACATTGTATGAGAAAATAAA+AGG 0.344510 3_1:-72349343 None:intergenic
GGCTATCATTGATAGTGAAT+TGG 0.351070 3_1:+72347551 Msa0373330:five_prime_UTR
TTAATAAACAAACTCAATAT+TGG 0.352312 3_1:-72348865 None:intergenic
CCAAATTTGTGTCATTAGTT+GGG 0.352428 3_1:-72349562 None:intergenic
ACATGTTAACTTACCAGCTT+TGG 0.355879 3_1:-72347579 None:intergenic
TGAGAACGTGCAAGTGTTAC+CGG 0.356877 3_1:+72349472 Msa0373330:three_prime_UTR
AAGTGTCTTGGGTGTTTAGT+AGG 0.364031 3_1:+72349152 Msa0373330:three_prime_UTR
CACATCAGCACCAGCAGCTC+TGG 0.370554 3_1:-72347800 None:intergenic
TTGCACTAAATTTCAAGTTC+AGG 0.372132 3_1:-72348249 None:intergenic
GTCTGGTACCAAGGAATTCA+TGG 0.376590 3_1:+72347774 Msa0373330:CDS
GATGGCTGTTGGGCGACATT+AGG 0.380376 3_1:-72346823 None:intergenic
CGATGATGTCAGAGATTAGA+AGG 0.384147 3_1:-72346891 None:intergenic
AGGTATTTGGTGATCTAGTT+TGG 0.387688 3_1:+72349181 Msa0373330:three_prime_UTR
GTGTACTTGCTGGGAGTTTG+TGG 0.389299 3_1:+72349245 Msa0373330:three_prime_UTR
AAAGTTTAGTTTGTTACAAA+TGG 0.391843 3_1:+72348270 Msa0373330:three_prime_UTR
AAAGTGTTGTTGGTCTTGTC+AGG 0.406501 3_1:-72347528 None:intergenic
AGAGAAAGTTGAATGAATCT+AGG 0.407280 3_1:-72346772 None:intergenic
CACTTCCATCCTCACTAAAC+AGG 0.418369 3_1:-72348575 None:intergenic
TTGGATAAGATCTGGTTTGA+GGG 0.418407 3_1:+72347450 Msa0373330:five_prime_UTR
AATGATAGCCAAAGTGTTGT+TGG 0.434857 3_1:-72347538 None:intergenic
TGTTCAACTTTAGGAGTATC+CGG 0.438526 3_1:-72349491 None:intergenic
GGTGGTTACAATAACCTTCT+CGG 0.449161 3_1:-72347872 None:intergenic
TTTGGATAAGATCTGGTTTG+AGG 0.453390 3_1:+72347449 Msa0373330:five_prime_UTR
GACTGTACAATGATGAATTT+GGG 0.458081 3_1:+72348813 Msa0373330:three_prime_UTR
AGAATCTAGCTTGCTCTTGT+CGG 0.459174 3_1:-72347478 None:intergenic
TCTGGCTTCCATGAATTCCT+TGG 0.462619 3_1:-72347782 None:intergenic
TGTAGGCTTTGGATAAGATC+TGG 0.462681 3_1:+72347442 Msa0373330:intron
GAGGAATTAATCTGAAGAAT+CGG 0.463057 3_1:-72348213 None:intergenic
CTGTTTAGTGAGGATGGAAG+TGG 0.465603 3_1:+72348576 Msa0373330:three_prime_UTR
AAAACATGAGTGTGAAACTA+AGG 0.467947 3_1:+72348718 Msa0373330:three_prime_UTR
GACACAAATTTGGAAGATGA+AGG 0.468448 3_1:+72349572 Msa0373330:three_prime_UTR
CTAGGCAGTATTGCTAGGTC+TGG 0.481887 3_1:+72347757 Msa0373330:CDS
TTCATGGAAGCCAGAGCTGC+TGG 0.483932 3_1:+72347790 Msa0373330:CDS
TGGGCGACATTAGGATTTCA+AGG 0.484112 3_1:-72346814 None:intergenic
CACCAATGGTCAGCTAGAAT+AGG 0.487397 3_1:-72348998 None:intergenic
GTGAGCATGATTAGACAGTT+TGG 0.488109 3_1:+72347820 Msa0373330:CDS
GAGGGAGTGAGATGGCTGTT+GGG 0.491170 3_1:-72346833 None:intergenic
AATTTCAAGTTCAGGTGAAA+GGG 0.491283 3_1:-72348241 None:intergenic
CGAGGGAGTGAGATGGCTGT+TGG 0.492666 3_1:-72346834 None:intergenic
AAATTTCAAGTTCAGGTGAA+AGG 0.498069 3_1:-72348242 None:intergenic
ATTTGAATTTGTGTTGATTG+AGG 0.498410 3_1:+72348400 Msa0373330:three_prime_UTR
TGAATTGGAATGACCAAAGC+TGG 0.500501 3_1:+72347566 Msa0373330:exon
CTCCTATTCTAGCTGACCAT+TGG 0.500831 3_1:+72348996 Msa0373330:three_prime_UTR
TTCATCATCATTGTGCTTGG+TGG 0.501938 3_1:-72347890 None:intergenic
TGCTTACCTTGTTGCCGAGA+AGG 0.502623 3_1:+72347858 Msa0373330:CDS
ATGATTAGACAGTTTGGTGT+TGG 0.508573 3_1:+72347826 Msa0373330:CDS
ATCTGAAGAATCGGCAACAA+AGG 0.508803 3_1:-72348204 None:intergenic
CACTGTGAGAAGTTTGATGT+TGG 0.510257 3_1:+72347948 Msa0373330:CDS
CCATTCAGTTTCACTCAAGT+AGG 0.510385 3_1:-72348299 None:intergenic
TGACAAGACCAACAACACTT+TGG 0.514838 3_1:+72347530 Msa0373330:five_prime_UTR
AAACTGTGAAATCGCGGAGA+AGG 0.517514 3_1:-72346917 None:intergenic
ACCGTCTAAATCCAATAGAA+AGG 0.518114 3_1:+72348959 Msa0373330:three_prime_UTR
TCCTTTCTATTGGATTTAGA+CGG 0.525012 3_1:-72348960 None:intergenic
CCTACTTGAGTGAAACTGAA+TGG 0.525469 3_1:+72348299 Msa0373330:three_prime_UTR
TGATAATAAAATTTGGTTGG+TGG 0.525637 3_1:+72349372 Msa0373330:three_prime_UTR
GGTTTAGAGCTTTACACCAA+TGG 0.532132 3_1:-72349012 None:intergenic
AACTGTGAAATCGCGGAGAA+GGG 0.542338 3_1:-72346916 None:intergenic
TGGGTGTTGGTTCTCAATTG+GGG 0.545517 3_1:+72348483 Msa0373330:three_prime_UTR
AAATTATCACTACACCCAAA+AGG 0.546724 3_1:-72349663 None:intergenic
TATTGCTAGGTCTGGTACCA+AGG 0.549287 3_1:+72347765 Msa0373330:CDS
GACAAGAGAGAGTAGATCGA+GGG 0.549949 3_1:-72346851 None:intergenic
TCTGAAGAATCGGCAACAAA+GGG 0.552800 3_1:-72348203 None:intergenic
GGGCGACATTAGGATTTCAA+GGG 0.565521 3_1:-72346813 None:intergenic
TTCAGGTGAAAGGGAAAGAG+AGG 0.565540 3_1:-72348232 None:intergenic
ATAATGTGAATGAACAACTC+TGG 0.569519 3_1:-72347504 None:intergenic
GTGTGGGAGTCTCAAGCTGG+TGG 0.575665 3_1:+72347919 Msa0373330:CDS
ATGTGATAATAAAATTTGGT+TGG 0.579817 3_1:+72349369 Msa0373330:three_prime_UTR
CAATAACCTTCTCGGCAACA+AGG 0.579875 3_1:-72347864 None:intergenic
TCAGATTTGGTGAACAACCT+AGG 0.583627 3_1:+72347739 Msa0373330:intron
AGTAGATCGAGGGAGTGAGA+TGG 0.587246 3_1:-72346841 None:intergenic
CTTGGGTGTTTAGTAGGCGT+AGG 0.588378 3_1:+72349158 Msa0373330:three_prime_UTR
GGGTGTTTAGTAGGCGTAGG+AGG 0.590902 3_1:+72349161 Msa0373330:three_prime_UTR
TTGTCTAGTCAAAGCTCTAG+TGG 0.590980 3_1:-72348771 None:intergenic
ACAACCTAGGCAGTATTGCT+AGG 0.593249 3_1:+72347752 Msa0373330:CDS
ATGTTCATCATCATTGTGCT+TGG 0.593326 3_1:-72347893 None:intergenic
CAAAATGTTAGCATTGAATG+TGG 0.606233 3_1:+72348791 Msa0373330:three_prime_UTR
CAGACCTAGCAATACTGCCT+AGG 0.609810 3_1:-72347756 None:intergenic
TATGTGTGGGAGTCTCAAGC+TGG 0.618590 3_1:+72347916 Msa0373330:CDS
AGACAAGAGAGAGTAGATCG+AGG 0.622715 3_1:-72346852 None:intergenic
GGCGACATTAGGATTTCAAG+GGG 0.625131 3_1:-72346812 None:intergenic
GCGAATAAACTGTGAAATCG+CGG 0.626932 3_1:-72346923 None:intergenic
TGTGGGAGTCTCAAGCTGGT+GGG 0.632292 3_1:+72347920 Msa0373330:CDS
AGAAGCACGGTCTATGCAAG+AGG 0.641230 3_1:+72349412 Msa0373330:three_prime_UTR
TTTCGGGTAAATAATAGGAG+AGG 0.648060 3_1:+72348161 Msa0373330:three_prime_UTR
TGGTGTAAAGCTCTAAACCC+AGG 0.652275 3_1:+72349016 Msa0373330:three_prime_UTR
ATGATGATGAACATTATGTG+TGG 0.680733 3_1:+72347902 Msa0373330:CDS
CAAGACAAAAGCAAGAAGCA+CGG 0.682836 3_1:+72349399 Msa0373330:three_prime_UTR
TAGCAGTTCGCAAAATACAG+AGG 0.697032 3_1:-72348544 None:intergenic
TGATGATGAACATTATGTGT+GGG 0.713722 3_1:+72347903 Msa0373330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTATATTTATTT+TGG + chr3_1:72349683-72349702 Msa0373330:three_prime_UTR 0.0%
!!! TTTTTTTTTTATATTTATTT+TGG + chr3_1:72349683-72349702 Msa0373330:three_prime_UTR 0.0%
!!! TTTTTTTTTTATATTTATTT+TGG + chr3_1:72349683-72349702 Msa0373330:three_prime_UTR 0.0%
!!! AATTATTGTTTTTAATGAAA+TGG + chr3_1:72347077-72347096 Msa0373330:intron 10.0%
!!! ATTATTGTTTTTAATGAAAT+GGG + chr3_1:72347078-72347097 Msa0373330:intron 10.0%
!! AAAAATTATCATAATAAAAG+AGG - chr3_1:72349070-72349089 None:intergenic 10.0%
!!! TTTTATGTGATAATAAAATT+TGG + chr3_1:72349365-72349384 Msa0373330:three_prime_UTR 10.0%
!!! TTTTTTATATTTATTTTGGA+TGG + chr3_1:72349687-72349706 Msa0373330:three_prime_UTR 10.0%
!!! AATTATTGTTTTTAATGAAA+TGG + chr3_1:72347077-72347096 Msa0373330:intron 10.0%
!!! ATTATTGTTTTTAATGAAAT+GGG + chr3_1:72347078-72347097 Msa0373330:intron 10.0%
!! AAAAATTATCATAATAAAAG+AGG - chr3_1:72349070-72349089 None:intergenic 10.0%
!!! TTTTATGTGATAATAAAATT+TGG + chr3_1:72349365-72349384 Msa0373330:three_prime_UTR 10.0%
!!! TTTTTTATATTTATTTTGGA+TGG + chr3_1:72349687-72349706 Msa0373330:three_prime_UTR 10.0%
!!! AATTATTGTTTTTAATGAAA+TGG + chr3_1:72347077-72347096 Msa0373330:intron 10.0%
!!! ATTATTGTTTTTAATGAAAT+GGG + chr3_1:72347078-72347097 Msa0373330:intron 10.0%
!! AAAAATTATCATAATAAAAG+AGG - chr3_1:72349070-72349089 None:intergenic 10.0%
!!! TTTTATGTGATAATAAAATT+TGG + chr3_1:72349365-72349384 Msa0373330:three_prime_UTR 10.0%
!!! TTTTTTATATTTATTTTGGA+TGG + chr3_1:72349687-72349706 Msa0373330:three_prime_UTR 10.0%
!! TATAATTGTTACTATTACTT+TGG + chr3_1:72347322-72347341 Msa0373330:intron 15.0%
!! AAAGAAAAAAAAAAGACTAA+AGG + chr3_1:72348072-72348091 Msa0373330:intron 15.0%
!!! TTATTGATTATTTAGCTTTT+CGG + chr3_1:72348144-72348163 Msa0373330:intron 15.0%
!!! AATTATATTTAGTGTTTTGT+TGG + chr3_1:72348514-72348533 Msa0373330:three_prime_UTR 15.0%
!! ATTAAATGCACTATATAAAA+TGG - chr3_1:72348683-72348702 None:intergenic 15.0%
!! TTAATAAACAAACTCAATAT+TGG - chr3_1:72348868-72348887 None:intergenic 15.0%
!! TATAATTGTTACTATTACTT+TGG + chr3_1:72347322-72347341 Msa0373330:intron 15.0%
!! AAAGAAAAAAAAAAGACTAA+AGG + chr3_1:72348072-72348091 Msa0373330:intron 15.0%
!!! TTATTGATTATTTAGCTTTT+CGG + chr3_1:72348144-72348163 Msa0373330:intron 15.0%
!!! AATTATATTTAGTGTTTTGT+TGG + chr3_1:72348514-72348533 Msa0373330:three_prime_UTR 15.0%
!! ATTAAATGCACTATATAAAA+TGG - chr3_1:72348683-72348702 None:intergenic 15.0%
!! TTAATAAACAAACTCAATAT+TGG - chr3_1:72348868-72348887 None:intergenic 15.0%
!! TATAATTGTTACTATTACTT+TGG + chr3_1:72347322-72347341 Msa0373330:intron 15.0%
!! AAAGAAAAAAAAAAGACTAA+AGG + chr3_1:72348072-72348091 Msa0373330:intron 15.0%
!!! TTATTGATTATTTAGCTTTT+CGG + chr3_1:72348144-72348163 Msa0373330:intron 15.0%
!!! AATTATATTTAGTGTTTTGT+TGG + chr3_1:72348514-72348533 Msa0373330:three_prime_UTR 15.0%
!! ATTAAATGCACTATATAAAA+TGG - chr3_1:72348683-72348702 None:intergenic 15.0%
!! TTAATAAACAAACTCAATAT+TGG - chr3_1:72348868-72348887 None:intergenic 15.0%
!! AACAGAACATCTATTATATT+GGG - chr3_1:72347026-72347045 None:intergenic 20.0%
!! AAACAGAACATCTATTATAT+TGG - chr3_1:72347027-72347046 None:intergenic 20.0%
!!! GAAATTTTGGTTTTTGATAA+AGG + chr3_1:72347107-72347126 Msa0373330:intron 20.0%
!!! ATTTGTTGAAAATTAGAGTA+TGG + chr3_1:72347131-72347150 Msa0373330:intron 20.0%
!! AAAATTAGAGTATGGTTAAT+GGG + chr3_1:72347139-72347158 Msa0373330:intron 20.0%
!! AACTTCCATTCAAAAATTAA+AGG - chr3_1:72347271-72347290 None:intergenic 20.0%
!! CAATTATACTTCAAAAAACA+TGG - chr3_1:72347310-72347329 None:intergenic 20.0%
!!! TATTGATTATTTAGCTTTTC+GGG + chr3_1:72348145-72348164 Msa0373330:intron 20.0%
!!! AAAGTTTAGTTTGTTACAAA+TGG + chr3_1:72348270-72348289 Msa0373330:three_prime_UTR 20.0%
!!! AATTTCTTTTCTGATATTTC+TGG + chr3_1:72348655-72348674 Msa0373330:three_prime_UTR 20.0%
!! ACACAAACTAAAAATATGTA+TGG - chr3_1:72349229-72349248 None:intergenic 20.0%
!! ACATTGTATGAGAAAATAAA+AGG - chr3_1:72349346-72349365 None:intergenic 20.0%
!! ATGTGATAATAAAATTTGGT+TGG + chr3_1:72349369-72349388 Msa0373330:three_prime_UTR 20.0%
!! AACAGAACATCTATTATATT+GGG - chr3_1:72347026-72347045 None:intergenic 20.0%
!! AAACAGAACATCTATTATAT+TGG - chr3_1:72347027-72347046 None:intergenic 20.0%
!!! GAAATTTTGGTTTTTGATAA+AGG + chr3_1:72347107-72347126 Msa0373330:intron 20.0%
!!! ATTTGTTGAAAATTAGAGTA+TGG + chr3_1:72347131-72347150 Msa0373330:intron 20.0%
!! AAAATTAGAGTATGGTTAAT+GGG + chr3_1:72347139-72347158 Msa0373330:intron 20.0%
!! AACTTCCATTCAAAAATTAA+AGG - chr3_1:72347271-72347290 None:intergenic 20.0%
!! CAATTATACTTCAAAAAACA+TGG - chr3_1:72347310-72347329 None:intergenic 20.0%
!!! TATTGATTATTTAGCTTTTC+GGG + chr3_1:72348145-72348164 Msa0373330:intron 20.0%
!!! AAAGTTTAGTTTGTTACAAA+TGG + chr3_1:72348270-72348289 Msa0373330:three_prime_UTR 20.0%
!!! AATTTCTTTTCTGATATTTC+TGG + chr3_1:72348655-72348674 Msa0373330:three_prime_UTR 20.0%
!! ACACAAACTAAAAATATGTA+TGG - chr3_1:72349229-72349248 None:intergenic 20.0%
!! ACATTGTATGAGAAAATAAA+AGG - chr3_1:72349346-72349365 None:intergenic 20.0%
!! ATGTGATAATAAAATTTGGT+TGG + chr3_1:72349369-72349388 Msa0373330:three_prime_UTR 20.0%
!! AACAGAACATCTATTATATT+GGG - chr3_1:72347026-72347045 None:intergenic 20.0%
!! AAACAGAACATCTATTATAT+TGG - chr3_1:72347027-72347046 None:intergenic 20.0%
!!! GAAATTTTGGTTTTTGATAA+AGG + chr3_1:72347107-72347126 Msa0373330:intron 20.0%
!!! ATTTGTTGAAAATTAGAGTA+TGG + chr3_1:72347131-72347150 Msa0373330:intron 20.0%
!! AAAATTAGAGTATGGTTAAT+GGG + chr3_1:72347139-72347158 Msa0373330:intron 20.0%
!! AACTTCCATTCAAAAATTAA+AGG - chr3_1:72347271-72347290 None:intergenic 20.0%
!! CAATTATACTTCAAAAAACA+TGG - chr3_1:72347310-72347329 None:intergenic 20.0%
!!! TATTGATTATTTAGCTTTTC+GGG + chr3_1:72348145-72348164 Msa0373330:intron 20.0%
!!! AAAGTTTAGTTTGTTACAAA+TGG + chr3_1:72348270-72348289 Msa0373330:three_prime_UTR 20.0%
!!! AATTTCTTTTCTGATATTTC+TGG + chr3_1:72348655-72348674 Msa0373330:three_prime_UTR 20.0%
!! ACACAAACTAAAAATATGTA+TGG - chr3_1:72349229-72349248 None:intergenic 20.0%
!! ACATTGTATGAGAAAATAAA+AGG - chr3_1:72349346-72349365 None:intergenic 20.0%
!! ATGTGATAATAAAATTTGGT+TGG + chr3_1:72349369-72349388 Msa0373330:three_prime_UTR 20.0%
! ACAGAACATCTATTATATTG+GGG - chr3_1:72347025-72347044 None:intergenic 25.0%
!!! TCTGTTTTCTATTTGTTAAC+TGG + chr3_1:72347040-72347059 Msa0373330:intron 25.0%
!!! AAATGGGTTTGTTGAAATTT+TGG + chr3_1:72347094-72347113 Msa0373330:intron 25.0%
! GAAAATTAGAGTATGGTTAA+TGG + chr3_1:72347138-72347157 Msa0373330:intron 25.0%
!!! TCGATCCTTTAATTTTTGAA+TGG + chr3_1:72347263-72347282 Msa0373330:intron 25.0%
! TACTATTACTTTGGATTGTT+AGG + chr3_1:72347331-72347350 Msa0373330:intron 25.0%
! ACTATTACTTTGGATTGTTA+GGG + chr3_1:72347332-72347351 Msa0373330:intron 25.0%
! TTTGTGTTATGTTTCAGATT+TGG + chr3_1:72347726-72347745 Msa0373330:intron 25.0%
! ATCAATAAGCCAATTTCAAA+GGG - chr3_1:72348132-72348151 None:intergenic 25.0%
! AATCAATAAGCCAATTTCAA+AGG - chr3_1:72348133-72348152 None:intergenic 25.0%
!!! TAGGAGAGGTATTTTTTTAA+AGG + chr3_1:72348175-72348194 Msa0373330:three_prime_UTR 25.0%
! AATGGTAAAAGTTGTCTAAA+TGG + chr3_1:72348317-72348336 Msa0373330:three_prime_UTR 25.0%
!!! ATTTGAATTTGTGTTGATTG+AGG + chr3_1:72348400-72348419 Msa0373330:three_prime_UTR 25.0%
!!! TTTCACACTCATGTTTTTTT+TGG - chr3_1:72348715-72348734 None:intergenic 25.0%
!!! TTTTCTATGTTTTGAGTTCA+AGG + chr3_1:72348933-72348952 Msa0373330:three_prime_UTR 25.0%
! AAAATCTTTCTCCTTTCTAT+TGG - chr3_1:72348973-72348992 None:intergenic 25.0%
!! ATAGAAAGGAGAAAGATTTT+AGG + chr3_1:72348973-72348992 Msa0373330:three_prime_UTR 25.0%
! AATGAAAAAGTTAAAGACCT+GGG - chr3_1:72349036-72349055 None:intergenic 25.0%
! TGATAATAAAATTTGGTTGG+TGG + chr3_1:72349372-72349391 Msa0373330:three_prime_UTR 25.0%
!! TTGTCAATTTGTTCAACTTT+AGG - chr3_1:72349503-72349522 None:intergenic 25.0%
!!! TAGTAATTTTGAAGTAGATG+AGG + chr3_1:72349538-72349557 Msa0373330:three_prime_UTR 25.0%
!! TTACTAGAACTTTAACCTTT+TGG + chr3_1:72349648-72349667 Msa0373330:three_prime_UTR 25.0%
!! TACTAGAACTTTAACCTTTT+GGG + chr3_1:72349649-72349668 Msa0373330:three_prime_UTR 25.0%
! ACAGAACATCTATTATATTG+GGG - chr3_1:72347025-72347044 None:intergenic 25.0%
!!! TCTGTTTTCTATTTGTTAAC+TGG + chr3_1:72347040-72347059 Msa0373330:intron 25.0%
!!! AAATGGGTTTGTTGAAATTT+TGG + chr3_1:72347094-72347113 Msa0373330:intron 25.0%
! GAAAATTAGAGTATGGTTAA+TGG + chr3_1:72347138-72347157 Msa0373330:intron 25.0%
!!! TCGATCCTTTAATTTTTGAA+TGG + chr3_1:72347263-72347282 Msa0373330:intron 25.0%
! TACTATTACTTTGGATTGTT+AGG + chr3_1:72347331-72347350 Msa0373330:intron 25.0%
! ACTATTACTTTGGATTGTTA+GGG + chr3_1:72347332-72347351 Msa0373330:intron 25.0%
! TTTGTGTTATGTTTCAGATT+TGG + chr3_1:72347726-72347745 Msa0373330:intron 25.0%
! ATCAATAAGCCAATTTCAAA+GGG - chr3_1:72348132-72348151 None:intergenic 25.0%
! AATCAATAAGCCAATTTCAA+AGG - chr3_1:72348133-72348152 None:intergenic 25.0%
!!! TAGGAGAGGTATTTTTTTAA+AGG + chr3_1:72348175-72348194 Msa0373330:three_prime_UTR 25.0%
! AATGGTAAAAGTTGTCTAAA+TGG + chr3_1:72348317-72348336 Msa0373330:three_prime_UTR 25.0%
!!! ATTTGAATTTGTGTTGATTG+AGG + chr3_1:72348400-72348419 Msa0373330:three_prime_UTR 25.0%
!!! TTTCACACTCATGTTTTTTT+TGG - chr3_1:72348715-72348734 None:intergenic 25.0%
!!! TTTTCTATGTTTTGAGTTCA+AGG + chr3_1:72348933-72348952 Msa0373330:three_prime_UTR 25.0%
! AAAATCTTTCTCCTTTCTAT+TGG - chr3_1:72348973-72348992 None:intergenic 25.0%
!! ATAGAAAGGAGAAAGATTTT+AGG + chr3_1:72348973-72348992 Msa0373330:three_prime_UTR 25.0%
! AATGAAAAAGTTAAAGACCT+GGG - chr3_1:72349036-72349055 None:intergenic 25.0%
! TGATAATAAAATTTGGTTGG+TGG + chr3_1:72349372-72349391 Msa0373330:three_prime_UTR 25.0%
!! TTGTCAATTTGTTCAACTTT+AGG - chr3_1:72349503-72349522 None:intergenic 25.0%
!!! TAGTAATTTTGAAGTAGATG+AGG + chr3_1:72349538-72349557 Msa0373330:three_prime_UTR 25.0%
!! TTACTAGAACTTTAACCTTT+TGG + chr3_1:72349648-72349667 Msa0373330:three_prime_UTR 25.0%
!! TACTAGAACTTTAACCTTTT+GGG + chr3_1:72349649-72349668 Msa0373330:three_prime_UTR 25.0%
! ACAGAACATCTATTATATTG+GGG - chr3_1:72347025-72347044 None:intergenic 25.0%
!!! TCTGTTTTCTATTTGTTAAC+TGG + chr3_1:72347040-72347059 Msa0373330:intron 25.0%
!!! AAATGGGTTTGTTGAAATTT+TGG + chr3_1:72347094-72347113 Msa0373330:intron 25.0%
! GAAAATTAGAGTATGGTTAA+TGG + chr3_1:72347138-72347157 Msa0373330:intron 25.0%
!!! TCGATCCTTTAATTTTTGAA+TGG + chr3_1:72347263-72347282 Msa0373330:intron 25.0%
! TACTATTACTTTGGATTGTT+AGG + chr3_1:72347331-72347350 Msa0373330:intron 25.0%
! ACTATTACTTTGGATTGTTA+GGG + chr3_1:72347332-72347351 Msa0373330:intron 25.0%
! TTTGTGTTATGTTTCAGATT+TGG + chr3_1:72347726-72347745 Msa0373330:intron 25.0%
! ATCAATAAGCCAATTTCAAA+GGG - chr3_1:72348132-72348151 None:intergenic 25.0%
! AATCAATAAGCCAATTTCAA+AGG - chr3_1:72348133-72348152 None:intergenic 25.0%
!!! TAGGAGAGGTATTTTTTTAA+AGG + chr3_1:72348175-72348194 Msa0373330:three_prime_UTR 25.0%
! AATGGTAAAAGTTGTCTAAA+TGG + chr3_1:72348317-72348336 Msa0373330:three_prime_UTR 25.0%
!!! ATTTGAATTTGTGTTGATTG+AGG + chr3_1:72348400-72348419 Msa0373330:three_prime_UTR 25.0%
!!! TTTCACACTCATGTTTTTTT+TGG - chr3_1:72348715-72348734 None:intergenic 25.0%
!!! TTTTCTATGTTTTGAGTTCA+AGG + chr3_1:72348933-72348952 Msa0373330:three_prime_UTR 25.0%
! AAAATCTTTCTCCTTTCTAT+TGG - chr3_1:72348973-72348992 None:intergenic 25.0%
!! ATAGAAAGGAGAAAGATTTT+AGG + chr3_1:72348973-72348992 Msa0373330:three_prime_UTR 25.0%
! AATGAAAAAGTTAAAGACCT+GGG - chr3_1:72349036-72349055 None:intergenic 25.0%
! TGATAATAAAATTTGGTTGG+TGG + chr3_1:72349372-72349391 Msa0373330:three_prime_UTR 25.0%
!! TTGTCAATTTGTTCAACTTT+AGG - chr3_1:72349503-72349522 None:intergenic 25.0%
!!! TAGTAATTTTGAAGTAGATG+AGG + chr3_1:72349538-72349557 Msa0373330:three_prime_UTR 25.0%
!! TTACTAGAACTTTAACCTTT+TGG + chr3_1:72349648-72349667 Msa0373330:three_prime_UTR 25.0%
!! TACTAGAACTTTAACCTTTT+GGG + chr3_1:72349649-72349668 Msa0373330:three_prime_UTR 25.0%
AGAGAAAGTTGAATGAATCT+AGG - chr3_1:72346775-72346794 None:intergenic 30.0%
!! TCTGTGTTGTTAGGTTATTT+TGG + chr3_1:72347214-72347233 Msa0373330:intron 30.0%
!!! TTGTTAGGTTATTTTGGTGT+TGG + chr3_1:72347220-72347239 Msa0373330:intron 30.0%
!!! TGTTAGGTTATTTTGGTGTT+GGG + chr3_1:72347221-72347240 Msa0373330:intron 30.0%
!!! ATAGACGATTTTGTTGTTGT+GGG + chr3_1:72347380-72347399 Msa0373330:intron 30.0%
ATAATGTGAATGAACAACTC+TGG - chr3_1:72347507-72347526 None:intergenic 30.0%
! ATGATGATGAACATTATGTG+TGG + chr3_1:72347902-72347921 Msa0373330:CDS 30.0%
! TGATGATGAACATTATGTGT+GGG + chr3_1:72347903-72347922 Msa0373330:CDS 30.0%
! TTTGATTGCTTTGTTAGTGT+TGG + chr3_1:72347989-72348008 Msa0373330:intron 30.0%
! AAAAAAGACTAAAGGTGTGT+TGG + chr3_1:72348080-72348099 Msa0373330:intron 30.0%
!!! TAGCTTTTCGGGTAAATAAT+AGG + chr3_1:72348156-72348175 Msa0373330:intron 30.0%
GAGGAATTAATCTGAAGAAT+CGG - chr3_1:72348216-72348235 None:intergenic 30.0%
!! AATTTCAAGTTCAGGTGAAA+GGG - chr3_1:72348244-72348263 None:intergenic 30.0%
!! AAATTTCAAGTTCAGGTGAA+AGG - chr3_1:72348245-72348264 None:intergenic 30.0%
!! TTGCACTAAATTTCAAGTTC+AGG - chr3_1:72348252-72348271 None:intergenic 30.0%
GTAGCATATGTTTGTATTCT+CGG + chr3_1:72348435-72348454 Msa0373330:three_prime_UTR 30.0%
!! TCATCGTTTTTGTTCTCATT+TGG + chr3_1:72348463-72348482 Msa0373330:three_prime_UTR 30.0%
!! CATCGTTTTTGTTCTCATTT+GGG + chr3_1:72348464-72348483 Msa0373330:three_prime_UTR 30.0%
! ATATGTTTTCCTGTTTAGTG+AGG + chr3_1:72348566-72348585 Msa0373330:three_prime_UTR 30.0%
!!! GGTTTGTTGTTTTCTGTATT+TGG + chr3_1:72348597-72348616 Msa0373330:three_prime_UTR 30.0%
!!! GTATTTGGTGTCTTTTGTAT+TGG + chr3_1:72348612-72348631 Msa0373330:three_prime_UTR 30.0%
!! TTTTGTATTGGTGTTCAGTT+TGG + chr3_1:72348624-72348643 Msa0373330:three_prime_UTR 30.0%
!!! CACTCATGTTTTTTTTGGAA+AGG - chr3_1:72348710-72348729 None:intergenic 30.0%
AAAACATGAGTGTGAAACTA+AGG + chr3_1:72348718-72348737 Msa0373330:three_prime_UTR 30.0%
! CAAAATGTTAGCATTGAATG+TGG + chr3_1:72348791-72348810 Msa0373330:three_prime_UTR 30.0%
GACTGTACAATGATGAATTT+GGG + chr3_1:72348813-72348832 Msa0373330:three_prime_UTR 30.0%
TCCTTTCTATTGGATTTAGA+CGG - chr3_1:72348963-72348982 None:intergenic 30.0%
GAATGAAAAAGTTAAAGACC+TGG - chr3_1:72349037-72349056 None:intergenic 30.0%
!!! TGCATTTTTTCAAGTGTCTT+GGG + chr3_1:72349141-72349160 Msa0373330:three_prime_UTR 30.0%
!!! TTTTTAGTTTGTGTACTTGC+TGG + chr3_1:72349235-72349254 Msa0373330:three_prime_UTR 30.0%
!!! TTTTAGTTTGTGTACTTGCT+GGG + chr3_1:72349236-72349255 Msa0373330:three_prime_UTR 30.0%
! CCAAATTTGTGTCATTAGTT+GGG - chr3_1:72349565-72349584 None:intergenic 30.0%
! TCCAAATTTGTGTCATTAGT+TGG - chr3_1:72349566-72349585 None:intergenic 30.0%
AAATTATCACTACACCCAAA+AGG - chr3_1:72349666-72349685 None:intergenic 30.0%
AGAGAAAGTTGAATGAATCT+AGG - chr3_1:72346775-72346794 None:intergenic 30.0%
!! TCTGTGTTGTTAGGTTATTT+TGG + chr3_1:72347214-72347233 Msa0373330:intron 30.0%
!!! TTGTTAGGTTATTTTGGTGT+TGG + chr3_1:72347220-72347239 Msa0373330:intron 30.0%
!!! TGTTAGGTTATTTTGGTGTT+GGG + chr3_1:72347221-72347240 Msa0373330:intron 30.0%
!!! ATAGACGATTTTGTTGTTGT+GGG + chr3_1:72347380-72347399 Msa0373330:intron 30.0%
ATAATGTGAATGAACAACTC+TGG - chr3_1:72347507-72347526 None:intergenic 30.0%
! ATGATGATGAACATTATGTG+TGG + chr3_1:72347902-72347921 Msa0373330:CDS 30.0%
! TGATGATGAACATTATGTGT+GGG + chr3_1:72347903-72347922 Msa0373330:CDS 30.0%
! TTTGATTGCTTTGTTAGTGT+TGG + chr3_1:72347989-72348008 Msa0373330:intron 30.0%
! AAAAAAGACTAAAGGTGTGT+TGG + chr3_1:72348080-72348099 Msa0373330:intron 30.0%
!!! TAGCTTTTCGGGTAAATAAT+AGG + chr3_1:72348156-72348175 Msa0373330:intron 30.0%
GAGGAATTAATCTGAAGAAT+CGG - chr3_1:72348216-72348235 None:intergenic 30.0%
!! AATTTCAAGTTCAGGTGAAA+GGG - chr3_1:72348244-72348263 None:intergenic 30.0%
!! AAATTTCAAGTTCAGGTGAA+AGG - chr3_1:72348245-72348264 None:intergenic 30.0%
!! TTGCACTAAATTTCAAGTTC+AGG - chr3_1:72348252-72348271 None:intergenic 30.0%
GTAGCATATGTTTGTATTCT+CGG + chr3_1:72348435-72348454 Msa0373330:three_prime_UTR 30.0%
!! TCATCGTTTTTGTTCTCATT+TGG + chr3_1:72348463-72348482 Msa0373330:three_prime_UTR 30.0%
!! CATCGTTTTTGTTCTCATTT+GGG + chr3_1:72348464-72348483 Msa0373330:three_prime_UTR 30.0%
! ATATGTTTTCCTGTTTAGTG+AGG + chr3_1:72348566-72348585 Msa0373330:three_prime_UTR 30.0%
!!! GGTTTGTTGTTTTCTGTATT+TGG + chr3_1:72348597-72348616 Msa0373330:three_prime_UTR 30.0%
!!! GTATTTGGTGTCTTTTGTAT+TGG + chr3_1:72348612-72348631 Msa0373330:three_prime_UTR 30.0%
!! TTTTGTATTGGTGTTCAGTT+TGG + chr3_1:72348624-72348643 Msa0373330:three_prime_UTR 30.0%
!!! CACTCATGTTTTTTTTGGAA+AGG - chr3_1:72348710-72348729 None:intergenic 30.0%
AAAACATGAGTGTGAAACTA+AGG + chr3_1:72348718-72348737 Msa0373330:three_prime_UTR 30.0%
! CAAAATGTTAGCATTGAATG+TGG + chr3_1:72348791-72348810 Msa0373330:three_prime_UTR 30.0%
GACTGTACAATGATGAATTT+GGG + chr3_1:72348813-72348832 Msa0373330:three_prime_UTR 30.0%
TCCTTTCTATTGGATTTAGA+CGG - chr3_1:72348963-72348982 None:intergenic 30.0%
GAATGAAAAAGTTAAAGACC+TGG - chr3_1:72349037-72349056 None:intergenic 30.0%
!!! TGCATTTTTTCAAGTGTCTT+GGG + chr3_1:72349141-72349160 Msa0373330:three_prime_UTR 30.0%
!!! TTTTTAGTTTGTGTACTTGC+TGG + chr3_1:72349235-72349254 Msa0373330:three_prime_UTR 30.0%
!!! TTTTAGTTTGTGTACTTGCT+GGG + chr3_1:72349236-72349255 Msa0373330:three_prime_UTR 30.0%
! CCAAATTTGTGTCATTAGTT+GGG - chr3_1:72349565-72349584 None:intergenic 30.0%
! TCCAAATTTGTGTCATTAGT+TGG - chr3_1:72349566-72349585 None:intergenic 30.0%
AAATTATCACTACACCCAAA+AGG - chr3_1:72349666-72349685 None:intergenic 30.0%
AGAGAAAGTTGAATGAATCT+AGG - chr3_1:72346775-72346794 None:intergenic 30.0%
!! TCTGTGTTGTTAGGTTATTT+TGG + chr3_1:72347214-72347233 Msa0373330:intron 30.0%
!!! TTGTTAGGTTATTTTGGTGT+TGG + chr3_1:72347220-72347239 Msa0373330:intron 30.0%
!!! TGTTAGGTTATTTTGGTGTT+GGG + chr3_1:72347221-72347240 Msa0373330:intron 30.0%
!!! ATAGACGATTTTGTTGTTGT+GGG + chr3_1:72347380-72347399 Msa0373330:intron 30.0%
ATAATGTGAATGAACAACTC+TGG - chr3_1:72347507-72347526 None:intergenic 30.0%
! ATGATGATGAACATTATGTG+TGG + chr3_1:72347902-72347921 Msa0373330:CDS 30.0%
! TGATGATGAACATTATGTGT+GGG + chr3_1:72347903-72347922 Msa0373330:CDS 30.0%
! TTTGATTGCTTTGTTAGTGT+TGG + chr3_1:72347989-72348008 Msa0373330:intron 30.0%
! AAAAAAGACTAAAGGTGTGT+TGG + chr3_1:72348080-72348099 Msa0373330:intron 30.0%
!!! TAGCTTTTCGGGTAAATAAT+AGG + chr3_1:72348156-72348175 Msa0373330:intron 30.0%
GAGGAATTAATCTGAAGAAT+CGG - chr3_1:72348216-72348235 None:intergenic 30.0%
!! AATTTCAAGTTCAGGTGAAA+GGG - chr3_1:72348244-72348263 None:intergenic 30.0%
!! AAATTTCAAGTTCAGGTGAA+AGG - chr3_1:72348245-72348264 None:intergenic 30.0%
!! TTGCACTAAATTTCAAGTTC+AGG - chr3_1:72348252-72348271 None:intergenic 30.0%
GTAGCATATGTTTGTATTCT+CGG + chr3_1:72348435-72348454 Msa0373330:three_prime_UTR 30.0%
!! TCATCGTTTTTGTTCTCATT+TGG + chr3_1:72348463-72348482 Msa0373330:three_prime_UTR 30.0%
!! CATCGTTTTTGTTCTCATTT+GGG + chr3_1:72348464-72348483 Msa0373330:three_prime_UTR 30.0%
! ATATGTTTTCCTGTTTAGTG+AGG + chr3_1:72348566-72348585 Msa0373330:three_prime_UTR 30.0%
!!! GGTTTGTTGTTTTCTGTATT+TGG + chr3_1:72348597-72348616 Msa0373330:three_prime_UTR 30.0%
!!! GTATTTGGTGTCTTTTGTAT+TGG + chr3_1:72348612-72348631 Msa0373330:three_prime_UTR 30.0%
!! TTTTGTATTGGTGTTCAGTT+TGG + chr3_1:72348624-72348643 Msa0373330:three_prime_UTR 30.0%
!!! CACTCATGTTTTTTTTGGAA+AGG - chr3_1:72348710-72348729 None:intergenic 30.0%
AAAACATGAGTGTGAAACTA+AGG + chr3_1:72348718-72348737 Msa0373330:three_prime_UTR 30.0%
! CAAAATGTTAGCATTGAATG+TGG + chr3_1:72348791-72348810 Msa0373330:three_prime_UTR 30.0%
GACTGTACAATGATGAATTT+GGG + chr3_1:72348813-72348832 Msa0373330:three_prime_UTR 30.0%
TCCTTTCTATTGGATTTAGA+CGG - chr3_1:72348963-72348982 None:intergenic 30.0%
GAATGAAAAAGTTAAAGACC+TGG - chr3_1:72349037-72349056 None:intergenic 30.0%
!!! TGCATTTTTTCAAGTGTCTT+GGG + chr3_1:72349141-72349160 Msa0373330:three_prime_UTR 30.0%
!!! TTTTTAGTTTGTGTACTTGC+TGG + chr3_1:72349235-72349254 Msa0373330:three_prime_UTR 30.0%
!!! TTTTAGTTTGTGTACTTGCT+GGG + chr3_1:72349236-72349255 Msa0373330:three_prime_UTR 30.0%
! CCAAATTTGTGTCATTAGTT+GGG - chr3_1:72349565-72349584 None:intergenic 30.0%
! TCCAAATTTGTGTCATTAGT+TGG - chr3_1:72349566-72349585 None:intergenic 30.0%
AAATTATCACTACACCCAAA+AGG - chr3_1:72349666-72349685 None:intergenic 30.0%
GGAACAAAGATAACAAAGAG+AGG - chr3_1:72347004-72347023 None:intergenic 35.0%
TTACTTTGGATTGTTAGGGT+TGG + chr3_1:72347336-72347355 Msa0373330:intron 35.0%
!!! GATAGACGATTTTGTTGTTG+TGG + chr3_1:72347379-72347398 Msa0373330:intron 35.0%
GTGTTAGAATGTTGTGATGT+AGG + chr3_1:72347425-72347444 Msa0373330:intron 35.0%
! TTTGGATAAGATCTGGTTTG+AGG + chr3_1:72347449-72347468 Msa0373330:five_prime_UTR 35.0%
! TTGGATAAGATCTGGTTTGA+GGG + chr3_1:72347450-72347469 Msa0373330:five_prime_UTR 35.0%
!! AATGATAGCCAAAGTGTTGT+TGG - chr3_1:72347541-72347560 None:intergenic 35.0%
!! GGCTATCATTGATAGTGAAT+TGG + chr3_1:72347551-72347570 Msa0373330:five_prime_UTR 35.0%
ACATGTTAACTTACCAGCTT+TGG - chr3_1:72347582-72347601 None:intergenic 35.0%
!! ATGATTAGACAGTTTGGTGT+TGG + chr3_1:72347826-72347845 Msa0373330:CDS 35.0%
ATGTTCATCATCATTGTGCT+TGG - chr3_1:72347896-72347915 None:intergenic 35.0%
! GCTTTTTACCTATACAGCTT+GGG + chr3_1:72348011-72348030 Msa0373330:intron 35.0%
! CTTTTTACCTATACAGCTTG+GGG + chr3_1:72348012-72348031 Msa0373330:intron 35.0%
! TTTTTACCTATACAGCTTGG+GGG + chr3_1:72348013-72348032 Msa0373330:intron 35.0%
!! GTTCTTAGACCCTTTGAAAT+TGG + chr3_1:72348120-72348139 Msa0373330:intron 35.0%
! TTTCGGGTAAATAATAGGAG+AGG + chr3_1:72348161-72348180 Msa0373330:three_prime_UTR 35.0%
! TTTTGTTCTCATTTGGGTGT+TGG + chr3_1:72348470-72348489 Msa0373330:three_prime_UTR 35.0%
GGACTGTACAATGATGAATT+TGG + chr3_1:72348812-72348831 Msa0373330:three_prime_UTR 35.0%
ACCGTCTAAATCCAATAGAA+AGG + chr3_1:72348959-72348978 Msa0373330:three_prime_UTR 35.0%
CACTTGAAAAAATGCAGCAA+AGG - chr3_1:72349137-72349156 None:intergenic 35.0%
!!! CTGCATTTTTTCAAGTGTCT+TGG + chr3_1:72349140-72349159 Msa0373330:three_prime_UTR 35.0%
! AGGTATTTGGTGATCTAGTT+TGG + chr3_1:72349181-72349200 Msa0373330:three_prime_UTR 35.0%
!! AGTTTCTTTTGACTCTAGTG+TGG + chr3_1:72349274-72349293 Msa0373330:three_prime_UTR 35.0%
!! TGTTCAACTTTAGGAGTATC+CGG - chr3_1:72349494-72349513 None:intergenic 35.0%
CCCAACTAATGACACAAATT+TGG + chr3_1:72349562-72349581 Msa0373330:three_prime_UTR 35.0%
GACACAAATTTGGAAGATGA+AGG + chr3_1:72349572-72349591 Msa0373330:three_prime_UTR 35.0%
GGAACAAAGATAACAAAGAG+AGG - chr3_1:72347004-72347023 None:intergenic 35.0%
TTACTTTGGATTGTTAGGGT+TGG + chr3_1:72347336-72347355 Msa0373330:intron 35.0%
!!! GATAGACGATTTTGTTGTTG+TGG + chr3_1:72347379-72347398 Msa0373330:intron 35.0%
GTGTTAGAATGTTGTGATGT+AGG + chr3_1:72347425-72347444 Msa0373330:intron 35.0%
! TTTGGATAAGATCTGGTTTG+AGG + chr3_1:72347449-72347468 Msa0373330:five_prime_UTR 35.0%
! TTGGATAAGATCTGGTTTGA+GGG + chr3_1:72347450-72347469 Msa0373330:five_prime_UTR 35.0%
!! AATGATAGCCAAAGTGTTGT+TGG - chr3_1:72347541-72347560 None:intergenic 35.0%
!! GGCTATCATTGATAGTGAAT+TGG + chr3_1:72347551-72347570 Msa0373330:five_prime_UTR 35.0%
ACATGTTAACTTACCAGCTT+TGG - chr3_1:72347582-72347601 None:intergenic 35.0%
!! ATGATTAGACAGTTTGGTGT+TGG + chr3_1:72347826-72347845 Msa0373330:CDS 35.0%
ATGTTCATCATCATTGTGCT+TGG - chr3_1:72347896-72347915 None:intergenic 35.0%
! GCTTTTTACCTATACAGCTT+GGG + chr3_1:72348011-72348030 Msa0373330:intron 35.0%
! CTTTTTACCTATACAGCTTG+GGG + chr3_1:72348012-72348031 Msa0373330:intron 35.0%
! TTTTTACCTATACAGCTTGG+GGG + chr3_1:72348013-72348032 Msa0373330:intron 35.0%
!! GTTCTTAGACCCTTTGAAAT+TGG + chr3_1:72348120-72348139 Msa0373330:intron 35.0%
! TTTCGGGTAAATAATAGGAG+AGG + chr3_1:72348161-72348180 Msa0373330:three_prime_UTR 35.0%
! TTTTGTTCTCATTTGGGTGT+TGG + chr3_1:72348470-72348489 Msa0373330:three_prime_UTR 35.0%
GGACTGTACAATGATGAATT+TGG + chr3_1:72348812-72348831 Msa0373330:three_prime_UTR 35.0%
ACCGTCTAAATCCAATAGAA+AGG + chr3_1:72348959-72348978 Msa0373330:three_prime_UTR 35.0%
CACTTGAAAAAATGCAGCAA+AGG - chr3_1:72349137-72349156 None:intergenic 35.0%
!!! CTGCATTTTTTCAAGTGTCT+TGG + chr3_1:72349140-72349159 Msa0373330:three_prime_UTR 35.0%
! AGGTATTTGGTGATCTAGTT+TGG + chr3_1:72349181-72349200 Msa0373330:three_prime_UTR 35.0%
!! AGTTTCTTTTGACTCTAGTG+TGG + chr3_1:72349274-72349293 Msa0373330:three_prime_UTR 35.0%
!! TGTTCAACTTTAGGAGTATC+CGG - chr3_1:72349494-72349513 None:intergenic 35.0%
CCCAACTAATGACACAAATT+TGG + chr3_1:72349562-72349581 Msa0373330:three_prime_UTR 35.0%
GACACAAATTTGGAAGATGA+AGG + chr3_1:72349572-72349591 Msa0373330:three_prime_UTR 35.0%
GGAACAAAGATAACAAAGAG+AGG - chr3_1:72347004-72347023 None:intergenic 35.0%
TTACTTTGGATTGTTAGGGT+TGG + chr3_1:72347336-72347355 Msa0373330:intron 35.0%
!!! GATAGACGATTTTGTTGTTG+TGG + chr3_1:72347379-72347398 Msa0373330:intron 35.0%
GTGTTAGAATGTTGTGATGT+AGG + chr3_1:72347425-72347444 Msa0373330:intron 35.0%
! TTTGGATAAGATCTGGTTTG+AGG + chr3_1:72347449-72347468 Msa0373330:five_prime_UTR 35.0%
! TTGGATAAGATCTGGTTTGA+GGG + chr3_1:72347450-72347469 Msa0373330:five_prime_UTR 35.0%
!! AATGATAGCCAAAGTGTTGT+TGG - chr3_1:72347541-72347560 None:intergenic 35.0%
!! GGCTATCATTGATAGTGAAT+TGG + chr3_1:72347551-72347570 Msa0373330:five_prime_UTR 35.0%
ACATGTTAACTTACCAGCTT+TGG - chr3_1:72347582-72347601 None:intergenic 35.0%
!! ATGATTAGACAGTTTGGTGT+TGG + chr3_1:72347826-72347845 Msa0373330:CDS 35.0%
ATGTTCATCATCATTGTGCT+TGG - chr3_1:72347896-72347915 None:intergenic 35.0%
! GCTTTTTACCTATACAGCTT+GGG + chr3_1:72348011-72348030 Msa0373330:intron 35.0%
! CTTTTTACCTATACAGCTTG+GGG + chr3_1:72348012-72348031 Msa0373330:intron 35.0%
! TTTTTACCTATACAGCTTGG+GGG + chr3_1:72348013-72348032 Msa0373330:intron 35.0%
!! GTTCTTAGACCCTTTGAAAT+TGG + chr3_1:72348120-72348139 Msa0373330:intron 35.0%
! TTTCGGGTAAATAATAGGAG+AGG + chr3_1:72348161-72348180 Msa0373330:three_prime_UTR 35.0%
! TTTTGTTCTCATTTGGGTGT+TGG + chr3_1:72348470-72348489 Msa0373330:three_prime_UTR 35.0%
GGACTGTACAATGATGAATT+TGG + chr3_1:72348812-72348831 Msa0373330:three_prime_UTR 35.0%
ACCGTCTAAATCCAATAGAA+AGG + chr3_1:72348959-72348978 Msa0373330:three_prime_UTR 35.0%
CACTTGAAAAAATGCAGCAA+AGG - chr3_1:72349137-72349156 None:intergenic 35.0%
!!! CTGCATTTTTTCAAGTGTCT+TGG + chr3_1:72349140-72349159 Msa0373330:three_prime_UTR 35.0%
! AGGTATTTGGTGATCTAGTT+TGG + chr3_1:72349181-72349200 Msa0373330:three_prime_UTR 35.0%
!! AGTTTCTTTTGACTCTAGTG+TGG + chr3_1:72349274-72349293 Msa0373330:three_prime_UTR 35.0%
!! TGTTCAACTTTAGGAGTATC+CGG - chr3_1:72349494-72349513 None:intergenic 35.0%
CCCAACTAATGACACAAATT+TGG + chr3_1:72349562-72349581 Msa0373330:three_prime_UTR 35.0%
GACACAAATTTGGAAGATGA+AGG + chr3_1:72349572-72349591 Msa0373330:three_prime_UTR 35.0%
CGATGATGTCAGAGATTAGA+AGG - chr3_1:72346894-72346913 None:intergenic 40.0%
GCGAATAAACTGTGAAATCG+CGG - chr3_1:72346926-72346945 None:intergenic 40.0%
!!! TCTTTGTTTTGTGCACTCTC+AGG + chr3_1:72346968-72346987 Msa0373330:five_prime_UTR 40.0%
! TGATTCAGCTCTGTGTTGTT+AGG + chr3_1:72347205-72347224 Msa0373330:intron 40.0%
GAATGTTGTGATGTAGGCTT+TGG + chr3_1:72347431-72347450 Msa0373330:intron 40.0%
!! TGTAGGCTTTGGATAAGATC+TGG + chr3_1:72347442-72347461 Msa0373330:intron 40.0%
!! AGAATCTAGCTTGCTCTTGT+CGG - chr3_1:72347481-72347500 None:intergenic 40.0%
!! AAAGTGTTGTTGGTCTTGTC+AGG - chr3_1:72347531-72347550 None:intergenic 40.0%
TGACAAGACCAACAACACTT+TGG + chr3_1:72347530-72347549 Msa0373330:five_prime_UTR 40.0%
TGAATTGGAATGACCAAAGC+TGG + chr3_1:72347566-72347585 Msa0373330:exon 40.0%
!! TCAGATTTGGTGAACAACCT+AGG + chr3_1:72347739-72347758 Msa0373330:intron 40.0%
GTGAGCATGATTAGACAGTT+TGG + chr3_1:72347820-72347839 Msa0373330:CDS 40.0%
GGTGGTTACAATAACCTTCT+CGG - chr3_1:72347875-72347894 None:intergenic 40.0%
TTCATCATCATTGTGCTTGG+TGG - chr3_1:72347893-72347912 None:intergenic 40.0%
CACTGTGAGAAGTTTGATGT+TGG + chr3_1:72347948-72347967 Msa0373330:CDS 40.0%
! CAATCAAAAAGCGCACAACA+TGG - chr3_1:72347977-72347996 None:intergenic 40.0%
! GGCTTTTTACCTATACAGCT+TGG + chr3_1:72348010-72348029 Msa0373330:intron 40.0%
TCTGAAGAATCGGCAACAAA+GGG - chr3_1:72348206-72348225 None:intergenic 40.0%
ATCTGAAGAATCGGCAACAA+AGG - chr3_1:72348207-72348226 None:intergenic 40.0%
CCATTCAGTTTCACTCAAGT+AGG - chr3_1:72348302-72348321 None:intergenic 40.0%
CCTACTTGAGTGAAACTGAA+TGG + chr3_1:72348299-72348318 Msa0373330:three_prime_UTR 40.0%
!! TTTGGGTGTTGGTTCTCAAT+TGG + chr3_1:72348481-72348500 Msa0373330:three_prime_UTR 40.0%
!! TTGGGTGTTGGTTCTCAATT+GGG + chr3_1:72348482-72348501 Msa0373330:three_prime_UTR 40.0%
TAGCAGTTCGCAAAATACAG+AGG - chr3_1:72348547-72348566 None:intergenic 40.0%
! GTTTTCCTGTTTAGTGAGGA+TGG + chr3_1:72348570-72348589 Msa0373330:three_prime_UTR 40.0%
! TTGTCTAGTCAAAGCTCTAG+TGG - chr3_1:72348774-72348793 None:intergenic 40.0%
! GGTTTAGAGCTTTACACCAA+TGG - chr3_1:72349015-72349034 None:intergenic 40.0%
AAGTGTCTTGGGTGTTTAGT+AGG + chr3_1:72349152-72349171 Msa0373330:three_prime_UTR 40.0%
CAAGACAAAAGCAAGAAGCA+CGG + chr3_1:72349399-72349418 Msa0373330:three_prime_UTR 40.0%
CGATGATGTCAGAGATTAGA+AGG - chr3_1:72346894-72346913 None:intergenic 40.0%
GCGAATAAACTGTGAAATCG+CGG - chr3_1:72346926-72346945 None:intergenic 40.0%
!!! TCTTTGTTTTGTGCACTCTC+AGG + chr3_1:72346968-72346987 Msa0373330:five_prime_UTR 40.0%
! TGATTCAGCTCTGTGTTGTT+AGG + chr3_1:72347205-72347224 Msa0373330:intron 40.0%
GAATGTTGTGATGTAGGCTT+TGG + chr3_1:72347431-72347450 Msa0373330:intron 40.0%
!! TGTAGGCTTTGGATAAGATC+TGG + chr3_1:72347442-72347461 Msa0373330:intron 40.0%
!! AGAATCTAGCTTGCTCTTGT+CGG - chr3_1:72347481-72347500 None:intergenic 40.0%
!! AAAGTGTTGTTGGTCTTGTC+AGG - chr3_1:72347531-72347550 None:intergenic 40.0%
TGACAAGACCAACAACACTT+TGG + chr3_1:72347530-72347549 Msa0373330:five_prime_UTR 40.0%
TGAATTGGAATGACCAAAGC+TGG + chr3_1:72347566-72347585 Msa0373330:exon 40.0%
!! TCAGATTTGGTGAACAACCT+AGG + chr3_1:72347739-72347758 Msa0373330:intron 40.0%
GTGAGCATGATTAGACAGTT+TGG + chr3_1:72347820-72347839 Msa0373330:CDS 40.0%
GGTGGTTACAATAACCTTCT+CGG - chr3_1:72347875-72347894 None:intergenic 40.0%
TTCATCATCATTGTGCTTGG+TGG - chr3_1:72347893-72347912 None:intergenic 40.0%
CACTGTGAGAAGTTTGATGT+TGG + chr3_1:72347948-72347967 Msa0373330:CDS 40.0%
! CAATCAAAAAGCGCACAACA+TGG - chr3_1:72347977-72347996 None:intergenic 40.0%
! GGCTTTTTACCTATACAGCT+TGG + chr3_1:72348010-72348029 Msa0373330:intron 40.0%
TCTGAAGAATCGGCAACAAA+GGG - chr3_1:72348206-72348225 None:intergenic 40.0%
ATCTGAAGAATCGGCAACAA+AGG - chr3_1:72348207-72348226 None:intergenic 40.0%
CCATTCAGTTTCACTCAAGT+AGG - chr3_1:72348302-72348321 None:intergenic 40.0%
CCTACTTGAGTGAAACTGAA+TGG + chr3_1:72348299-72348318 Msa0373330:three_prime_UTR 40.0%
!! TTTGGGTGTTGGTTCTCAAT+TGG + chr3_1:72348481-72348500 Msa0373330:three_prime_UTR 40.0%
!! TTGGGTGTTGGTTCTCAATT+GGG + chr3_1:72348482-72348501 Msa0373330:three_prime_UTR 40.0%
TAGCAGTTCGCAAAATACAG+AGG - chr3_1:72348547-72348566 None:intergenic 40.0%
! GTTTTCCTGTTTAGTGAGGA+TGG + chr3_1:72348570-72348589 Msa0373330:three_prime_UTR 40.0%
! TTGTCTAGTCAAAGCTCTAG+TGG - chr3_1:72348774-72348793 None:intergenic 40.0%
! GGTTTAGAGCTTTACACCAA+TGG - chr3_1:72349015-72349034 None:intergenic 40.0%
AAGTGTCTTGGGTGTTTAGT+AGG + chr3_1:72349152-72349171 Msa0373330:three_prime_UTR 40.0%
CAAGACAAAAGCAAGAAGCA+CGG + chr3_1:72349399-72349418 Msa0373330:three_prime_UTR 40.0%
CGATGATGTCAGAGATTAGA+AGG - chr3_1:72346894-72346913 None:intergenic 40.0%
GCGAATAAACTGTGAAATCG+CGG - chr3_1:72346926-72346945 None:intergenic 40.0%
!!! TCTTTGTTTTGTGCACTCTC+AGG + chr3_1:72346968-72346987 Msa0373330:five_prime_UTR 40.0%
! TGATTCAGCTCTGTGTTGTT+AGG + chr3_1:72347205-72347224 Msa0373330:intron 40.0%
GAATGTTGTGATGTAGGCTT+TGG + chr3_1:72347431-72347450 Msa0373330:intron 40.0%
!! TGTAGGCTTTGGATAAGATC+TGG + chr3_1:72347442-72347461 Msa0373330:intron 40.0%
!! AGAATCTAGCTTGCTCTTGT+CGG - chr3_1:72347481-72347500 None:intergenic 40.0%
!! AAAGTGTTGTTGGTCTTGTC+AGG - chr3_1:72347531-72347550 None:intergenic 40.0%
TGACAAGACCAACAACACTT+TGG + chr3_1:72347530-72347549 Msa0373330:five_prime_UTR 40.0%
TGAATTGGAATGACCAAAGC+TGG + chr3_1:72347566-72347585 Msa0373330:exon 40.0%
!! TCAGATTTGGTGAACAACCT+AGG + chr3_1:72347739-72347758 Msa0373330:intron 40.0%
GTGAGCATGATTAGACAGTT+TGG + chr3_1:72347820-72347839 Msa0373330:CDS 40.0%
GGTGGTTACAATAACCTTCT+CGG - chr3_1:72347875-72347894 None:intergenic 40.0%
TTCATCATCATTGTGCTTGG+TGG - chr3_1:72347893-72347912 None:intergenic 40.0%
CACTGTGAGAAGTTTGATGT+TGG + chr3_1:72347948-72347967 Msa0373330:CDS 40.0%
! CAATCAAAAAGCGCACAACA+TGG - chr3_1:72347977-72347996 None:intergenic 40.0%
! GGCTTTTTACCTATACAGCT+TGG + chr3_1:72348010-72348029 Msa0373330:intron 40.0%
TCTGAAGAATCGGCAACAAA+GGG - chr3_1:72348206-72348225 None:intergenic 40.0%
ATCTGAAGAATCGGCAACAA+AGG - chr3_1:72348207-72348226 None:intergenic 40.0%
CCATTCAGTTTCACTCAAGT+AGG - chr3_1:72348302-72348321 None:intergenic 40.0%
CCTACTTGAGTGAAACTGAA+TGG + chr3_1:72348299-72348318 Msa0373330:three_prime_UTR 40.0%
!! TTTGGGTGTTGGTTCTCAAT+TGG + chr3_1:72348481-72348500 Msa0373330:three_prime_UTR 40.0%
!! TTGGGTGTTGGTTCTCAATT+GGG + chr3_1:72348482-72348501 Msa0373330:three_prime_UTR 40.0%
TAGCAGTTCGCAAAATACAG+AGG - chr3_1:72348547-72348566 None:intergenic 40.0%
! GTTTTCCTGTTTAGTGAGGA+TGG + chr3_1:72348570-72348589 Msa0373330:three_prime_UTR 40.0%
! TTGTCTAGTCAAAGCTCTAG+TGG - chr3_1:72348774-72348793 None:intergenic 40.0%
! GGTTTAGAGCTTTACACCAA+TGG - chr3_1:72349015-72349034 None:intergenic 40.0%
AAGTGTCTTGGGTGTTTAGT+AGG + chr3_1:72349152-72349171 Msa0373330:three_prime_UTR 40.0%
CAAGACAAAAGCAAGAAGCA+CGG + chr3_1:72349399-72349418 Msa0373330:three_prime_UTR 40.0%
GGCGACATTAGGATTTCAAG+GGG - chr3_1:72346815-72346834 None:intergenic 45.0%
GGGCGACATTAGGATTTCAA+GGG - chr3_1:72346816-72346835 None:intergenic 45.0%
TGGGCGACATTAGGATTTCA+AGG - chr3_1:72346817-72346836 None:intergenic 45.0%
GACAAGAGAGAGTAGATCGA+GGG - chr3_1:72346854-72346873 None:intergenic 45.0%
AGACAAGAGAGAGTAGATCG+AGG - chr3_1:72346855-72346874 None:intergenic 45.0%
AACTGTGAAATCGCGGAGAA+GGG - chr3_1:72346919-72346938 None:intergenic 45.0%
AAACTGTGAAATCGCGGAGA+AGG - chr3_1:72346920-72346939 None:intergenic 45.0%
GATCGACGCAACTTACATAC+TGG - chr3_1:72347249-72347268 None:intergenic 45.0%
ACAACCTAGGCAGTATTGCT+AGG + chr3_1:72347752-72347771 Msa0373330:CDS 45.0%
TATTGCTAGGTCTGGTACCA+AGG + chr3_1:72347765-72347784 Msa0373330:CDS 45.0%
GTCTGGTACCAAGGAATTCA+TGG + chr3_1:72347774-72347793 Msa0373330:CDS 45.0%
! TCTGGCTTCCATGAATTCCT+TGG - chr3_1:72347785-72347804 None:intergenic 45.0%
CAATAACCTTCTCGGCAACA+AGG - chr3_1:72347867-72347886 None:intergenic 45.0%
! AAAGGTGTGTTGGAGACGAA+AGG + chr3_1:72348090-72348109 Msa0373330:intron 45.0%
TTCAGGTGAAAGGGAAAGAG+AGG - chr3_1:72348235-72348254 None:intergenic 45.0%
!! TGGGTGTTGGTTCTCAATTG+GGG + chr3_1:72348483-72348502 Msa0373330:three_prime_UTR 45.0%
CACTTCCATCCTCACTAAAC+AGG - chr3_1:72348578-72348597 None:intergenic 45.0%
CTGTTTAGTGAGGATGGAAG+TGG + chr3_1:72348576-72348595 Msa0373330:three_prime_UTR 45.0%
! CTCCTATTCTAGCTGACCAT+TGG + chr3_1:72348996-72349015 Msa0373330:three_prime_UTR 45.0%
CACCAATGGTCAGCTAGAAT+AGG - chr3_1:72349001-72349020 None:intergenic 45.0%
!! TGGTGTAAAGCTCTAAACCC+AGG + chr3_1:72349016-72349035 Msa0373330:three_prime_UTR 45.0%
!! TAGTAGGCGTAGGAGGTATT+TGG + chr3_1:72349168-72349187 Msa0373330:three_prime_UTR 45.0%
!!! GTGTGGTGTTGTCTTTTGTG+TGG + chr3_1:72349291-72349310 Msa0373330:three_prime_UTR 45.0%
TGAGAACGTGCAAGTGTTAC+CGG + chr3_1:72349472-72349491 Msa0373330:three_prime_UTR 45.0%
GGCGACATTAGGATTTCAAG+GGG - chr3_1:72346815-72346834 None:intergenic 45.0%
GGGCGACATTAGGATTTCAA+GGG - chr3_1:72346816-72346835 None:intergenic 45.0%
TGGGCGACATTAGGATTTCA+AGG - chr3_1:72346817-72346836 None:intergenic 45.0%
GACAAGAGAGAGTAGATCGA+GGG - chr3_1:72346854-72346873 None:intergenic 45.0%
AGACAAGAGAGAGTAGATCG+AGG - chr3_1:72346855-72346874 None:intergenic 45.0%
AACTGTGAAATCGCGGAGAA+GGG - chr3_1:72346919-72346938 None:intergenic 45.0%
AAACTGTGAAATCGCGGAGA+AGG - chr3_1:72346920-72346939 None:intergenic 45.0%
GATCGACGCAACTTACATAC+TGG - chr3_1:72347249-72347268 None:intergenic 45.0%
ACAACCTAGGCAGTATTGCT+AGG + chr3_1:72347752-72347771 Msa0373330:CDS 45.0%
TATTGCTAGGTCTGGTACCA+AGG + chr3_1:72347765-72347784 Msa0373330:CDS 45.0%
GTCTGGTACCAAGGAATTCA+TGG + chr3_1:72347774-72347793 Msa0373330:CDS 45.0%
! TCTGGCTTCCATGAATTCCT+TGG - chr3_1:72347785-72347804 None:intergenic 45.0%
CAATAACCTTCTCGGCAACA+AGG - chr3_1:72347867-72347886 None:intergenic 45.0%
! AAAGGTGTGTTGGAGACGAA+AGG + chr3_1:72348090-72348109 Msa0373330:intron 45.0%
TTCAGGTGAAAGGGAAAGAG+AGG - chr3_1:72348235-72348254 None:intergenic 45.0%
!! TGGGTGTTGGTTCTCAATTG+GGG + chr3_1:72348483-72348502 Msa0373330:three_prime_UTR 45.0%
CACTTCCATCCTCACTAAAC+AGG - chr3_1:72348578-72348597 None:intergenic 45.0%
CTGTTTAGTGAGGATGGAAG+TGG + chr3_1:72348576-72348595 Msa0373330:three_prime_UTR 45.0%
! CTCCTATTCTAGCTGACCAT+TGG + chr3_1:72348996-72349015 Msa0373330:three_prime_UTR 45.0%
CACCAATGGTCAGCTAGAAT+AGG - chr3_1:72349001-72349020 None:intergenic 45.0%
!! TGGTGTAAAGCTCTAAACCC+AGG + chr3_1:72349016-72349035 Msa0373330:three_prime_UTR 45.0%
!! TAGTAGGCGTAGGAGGTATT+TGG + chr3_1:72349168-72349187 Msa0373330:three_prime_UTR 45.0%
!!! GTGTGGTGTTGTCTTTTGTG+TGG + chr3_1:72349291-72349310 Msa0373330:three_prime_UTR 45.0%
TGAGAACGTGCAAGTGTTAC+CGG + chr3_1:72349472-72349491 Msa0373330:three_prime_UTR 45.0%
GGCGACATTAGGATTTCAAG+GGG - chr3_1:72346815-72346834 None:intergenic 45.0%
GGGCGACATTAGGATTTCAA+GGG - chr3_1:72346816-72346835 None:intergenic 45.0%
TGGGCGACATTAGGATTTCA+AGG - chr3_1:72346817-72346836 None:intergenic 45.0%
GACAAGAGAGAGTAGATCGA+GGG - chr3_1:72346854-72346873 None:intergenic 45.0%
AGACAAGAGAGAGTAGATCG+AGG - chr3_1:72346855-72346874 None:intergenic 45.0%
AACTGTGAAATCGCGGAGAA+GGG - chr3_1:72346919-72346938 None:intergenic 45.0%
AAACTGTGAAATCGCGGAGA+AGG - chr3_1:72346920-72346939 None:intergenic 45.0%
GATCGACGCAACTTACATAC+TGG - chr3_1:72347249-72347268 None:intergenic 45.0%
ACAACCTAGGCAGTATTGCT+AGG + chr3_1:72347752-72347771 Msa0373330:CDS 45.0%
TATTGCTAGGTCTGGTACCA+AGG + chr3_1:72347765-72347784 Msa0373330:CDS 45.0%
GTCTGGTACCAAGGAATTCA+TGG + chr3_1:72347774-72347793 Msa0373330:CDS 45.0%
! TCTGGCTTCCATGAATTCCT+TGG - chr3_1:72347785-72347804 None:intergenic 45.0%
CAATAACCTTCTCGGCAACA+AGG - chr3_1:72347867-72347886 None:intergenic 45.0%
! AAAGGTGTGTTGGAGACGAA+AGG + chr3_1:72348090-72348109 Msa0373330:intron 45.0%
TTCAGGTGAAAGGGAAAGAG+AGG - chr3_1:72348235-72348254 None:intergenic 45.0%
!! TGGGTGTTGGTTCTCAATTG+GGG + chr3_1:72348483-72348502 Msa0373330:three_prime_UTR 45.0%
CACTTCCATCCTCACTAAAC+AGG - chr3_1:72348578-72348597 None:intergenic 45.0%
CTGTTTAGTGAGGATGGAAG+TGG + chr3_1:72348576-72348595 Msa0373330:three_prime_UTR 45.0%
! CTCCTATTCTAGCTGACCAT+TGG + chr3_1:72348996-72349015 Msa0373330:three_prime_UTR 45.0%
CACCAATGGTCAGCTAGAAT+AGG - chr3_1:72349001-72349020 None:intergenic 45.0%
!! TGGTGTAAAGCTCTAAACCC+AGG + chr3_1:72349016-72349035 Msa0373330:three_prime_UTR 45.0%
!! TAGTAGGCGTAGGAGGTATT+TGG + chr3_1:72349168-72349187 Msa0373330:three_prime_UTR 45.0%
!!! GTGTGGTGTTGTCTTTTGTG+TGG + chr3_1:72349291-72349310 Msa0373330:three_prime_UTR 45.0%
TGAGAACGTGCAAGTGTTAC+CGG + chr3_1:72349472-72349491 Msa0373330:three_prime_UTR 45.0%
AGTAGATCGAGGGAGTGAGA+TGG - chr3_1:72346844-72346863 None:intergenic 50.0%
CAGACCTAGCAATACTGCCT+AGG - chr3_1:72347759-72347778 None:intergenic 50.0%
CTAGGCAGTATTGCTAGGTC+TGG + chr3_1:72347757-72347776 Msa0373330:CDS 50.0%
TGCTTACCTTGTTGCCGAGA+AGG + chr3_1:72347858-72347877 Msa0373330:CDS 50.0%
TATGTGTGGGAGTCTCAAGC+TGG + chr3_1:72347916-72347935 Msa0373330:CDS 50.0%
TTACCTATACAGCTTGGGGG+TGG + chr3_1:72348016-72348035 Msa0373330:intron 50.0%
TACCTATACAGCTTGGGGGT+GGG + chr3_1:72348017-72348036 Msa0373330:intron 50.0%
CTTGGGTGTTTAGTAGGCGT+AGG + chr3_1:72349158-72349177 Msa0373330:three_prime_UTR 50.0%
! GTGTACTTGCTGGGAGTTTG+TGG + chr3_1:72349245-72349264 Msa0373330:three_prime_UTR 50.0%
! AGAAGCACGGTCTATGCAAG+AGG + chr3_1:72349412-72349431 Msa0373330:three_prime_UTR 50.0%
AGTAGATCGAGGGAGTGAGA+TGG - chr3_1:72346844-72346863 None:intergenic 50.0%
CAGACCTAGCAATACTGCCT+AGG - chr3_1:72347759-72347778 None:intergenic 50.0%
CTAGGCAGTATTGCTAGGTC+TGG + chr3_1:72347757-72347776 Msa0373330:CDS 50.0%
TGCTTACCTTGTTGCCGAGA+AGG + chr3_1:72347858-72347877 Msa0373330:CDS 50.0%
TATGTGTGGGAGTCTCAAGC+TGG + chr3_1:72347916-72347935 Msa0373330:CDS 50.0%
TTACCTATACAGCTTGGGGG+TGG + chr3_1:72348016-72348035 Msa0373330:intron 50.0%
TACCTATACAGCTTGGGGGT+GGG + chr3_1:72348017-72348036 Msa0373330:intron 50.0%
CTTGGGTGTTTAGTAGGCGT+AGG + chr3_1:72349158-72349177 Msa0373330:three_prime_UTR 50.0%
! GTGTACTTGCTGGGAGTTTG+TGG + chr3_1:72349245-72349264 Msa0373330:three_prime_UTR 50.0%
! AGAAGCACGGTCTATGCAAG+AGG + chr3_1:72349412-72349431 Msa0373330:three_prime_UTR 50.0%
AGTAGATCGAGGGAGTGAGA+TGG - chr3_1:72346844-72346863 None:intergenic 50.0%
CAGACCTAGCAATACTGCCT+AGG - chr3_1:72347759-72347778 None:intergenic 50.0%
CTAGGCAGTATTGCTAGGTC+TGG + chr3_1:72347757-72347776 Msa0373330:CDS 50.0%
TGCTTACCTTGTTGCCGAGA+AGG + chr3_1:72347858-72347877 Msa0373330:CDS 50.0%
TATGTGTGGGAGTCTCAAGC+TGG + chr3_1:72347916-72347935 Msa0373330:CDS 50.0%
TTACCTATACAGCTTGGGGG+TGG + chr3_1:72348016-72348035 Msa0373330:intron 50.0%
TACCTATACAGCTTGGGGGT+GGG + chr3_1:72348017-72348036 Msa0373330:intron 50.0%
CTTGGGTGTTTAGTAGGCGT+AGG + chr3_1:72349158-72349177 Msa0373330:three_prime_UTR 50.0%
! GTGTACTTGCTGGGAGTTTG+TGG + chr3_1:72349245-72349264 Msa0373330:three_prime_UTR 50.0%
! AGAAGCACGGTCTATGCAAG+AGG + chr3_1:72349412-72349431 Msa0373330:three_prime_UTR 50.0%
GATGGCTGTTGGGCGACATT+AGG - chr3_1:72346826-72346845 None:intergenic 55.0%
GAGGGAGTGAGATGGCTGTT+GGG - chr3_1:72346836-72346855 None:intergenic 55.0%
TTCATGGAAGCCAGAGCTGC+TGG + chr3_1:72347790-72347809 Msa0373330:CDS 55.0%
TGTGGGAGTCTCAAGCTGGT+GGG + chr3_1:72347920-72347939 Msa0373330:CDS 55.0%
GGGTGTTTAGTAGGCGTAGG+AGG + chr3_1:72349161-72349180 Msa0373330:three_prime_UTR 55.0%
GATGGCTGTTGGGCGACATT+AGG - chr3_1:72346826-72346845 None:intergenic 55.0%
GAGGGAGTGAGATGGCTGTT+GGG - chr3_1:72346836-72346855 None:intergenic 55.0%
TTCATGGAAGCCAGAGCTGC+TGG + chr3_1:72347790-72347809 Msa0373330:CDS 55.0%
TGTGGGAGTCTCAAGCTGGT+GGG + chr3_1:72347920-72347939 Msa0373330:CDS 55.0%
GGGTGTTTAGTAGGCGTAGG+AGG + chr3_1:72349161-72349180 Msa0373330:three_prime_UTR 55.0%
GATGGCTGTTGGGCGACATT+AGG - chr3_1:72346826-72346845 None:intergenic 55.0%
GAGGGAGTGAGATGGCTGTT+GGG - chr3_1:72346836-72346855 None:intergenic 55.0%
TTCATGGAAGCCAGAGCTGC+TGG + chr3_1:72347790-72347809 Msa0373330:CDS 55.0%
TGTGGGAGTCTCAAGCTGGT+GGG + chr3_1:72347920-72347939 Msa0373330:CDS 55.0%
GGGTGTTTAGTAGGCGTAGG+AGG + chr3_1:72349161-72349180 Msa0373330:three_prime_UTR 55.0%
CGAGGGAGTGAGATGGCTGT+TGG - chr3_1:72346837-72346856 None:intergenic 60.0%
CACATCAGCACCAGCAGCTC+TGG - chr3_1:72347803-72347822 None:intergenic 60.0%
GTGTGGGAGTCTCAAGCTGG+TGG + chr3_1:72347919-72347938 Msa0373330:CDS 60.0%
AGCCCACCCCCAAGCTGTAT+AGG - chr3_1:72348022-72348041 None:intergenic 60.0%
CGAGGGAGTGAGATGGCTGT+TGG - chr3_1:72346837-72346856 None:intergenic 60.0%
CACATCAGCACCAGCAGCTC+TGG - chr3_1:72347803-72347822 None:intergenic 60.0%
GTGTGGGAGTCTCAAGCTGG+TGG + chr3_1:72347919-72347938 Msa0373330:CDS 60.0%
AGCCCACCCCCAAGCTGTAT+AGG - chr3_1:72348022-72348041 None:intergenic 60.0%
CGAGGGAGTGAGATGGCTGT+TGG - chr3_1:72346837-72346856 None:intergenic 60.0%
CACATCAGCACCAGCAGCTC+TGG - chr3_1:72347803-72347822 None:intergenic 60.0%
GTGTGGGAGTCTCAAGCTGG+TGG + chr3_1:72347919-72347938 Msa0373330:CDS 60.0%
AGCCCACCCCCAAGCTGTAT+AGG - chr3_1:72348022-72348041 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 72346760 72349806 72346760 ID=Msa0373330;Name=Msa0373330
chr3_1 mRNA 72346760 72349806 72346760 ID=Msa0373330-mRNA-1;Parent=Msa0373330;Name=Msa0373330-mRNA-1;_AED=0.04;_eAED=0.04;_QI=358|1|1|1|0.33|0|4|1655|87
chr3_1 exon 72346760 72346989 72346760 ID=Msa0373330-mRNA-1:exon:16072;Parent=Msa0373330-mRNA-1
chr3_1 exon 72347447 72347587 72347447 ID=Msa0373330-mRNA-1:exon:16073;Parent=Msa0373330-mRNA-1
chr3_1 exon 72347743 72348000 72347743 ID=Msa0373330-mRNA-1:exon:16074;Parent=Msa0373330-mRNA-1
chr3_1 exon 72348159 72349806 72348159 ID=Msa0373330-mRNA-1:exon:16075;Parent=Msa0373330-mRNA-1
chr3_1 five_prime_UTR 72346760 72346989 72346760 ID=Msa0373330-mRNA-1:five_prime_utr;Parent=Msa0373330-mRNA-1
chr3_1 five_prime_UTR 72347447 72347574 72347447 ID=Msa0373330-mRNA-1:five_prime_utr;Parent=Msa0373330-mRNA-1
chr3_1 CDS 72347575 72347587 72347575 ID=Msa0373330-mRNA-1:cds;Parent=Msa0373330-mRNA-1
chr3_1 CDS 72347743 72347993 72347743 ID=Msa0373330-mRNA-1:cds;Parent=Msa0373330-mRNA-1
chr3_1 three_prime_UTR 72347994 72348000 72347994 ID=Msa0373330-mRNA-1:three_prime_utr;Parent=Msa0373330-mRNA-1
chr3_1 three_prime_UTR 72348159 72349806 72348159 ID=Msa0373330-mRNA-1:three_prime_utr;Parent=Msa0373330-mRNA-1
Gene Sequence

>Msa0373330

ATGACCAAAGCTGATTTGGTGAACAACCTAGGCAGTATTGCTAGGTCTGGTACCAAGGAATTCATGGAAGCCAGAGCTGCTGGTGCTGATGTGAGCATGATTAGACAGTTTGGTGTTGGTTTCTACTCTGCTTACCTTGTTGCCGAGAAGGTTATTGTAACCACCAAGCACAATGATGATGAACATTATGTGTGGGAGTCTCAAGCTGGTGGGTCATTCACTGTGAGAAGTTTGATGTTGGTTTCCATGTTGTGCGCTTTTTGA
Protein sequence

>Msa0373330

MTKADLVNNLGSIARSGTKEFMEARAAGADVSMIRQFGVGFYSAYLVAEKVIVTTKHNDDEHYVWESQAGGSFTVRSLMLVSMLCAF*