Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379380 | XP_003602838.2 | 96.303 | 595 | 17 | 2 | 1 | 594 | 1 | 591 | 0.0 | 1185 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379380 | sp|Q9M0S5|ISOA3_ARATH | 71.647 | 589 | 155 | 3 | 6 | 594 | 2 | 578 | 0.0 | 878 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379380 | G7J3Z4 | 96.303 | 595 | 17 | 2 | 1 | 594 | 1 | 591 | 0.0 | 1185 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0032610 | Msa0379380 | 0.804667 | 1.935554e-49 | -8.615850e-47 |
| Msa0197180 | Msa0379380 | 0.810570 | 1.079415e-50 | -8.615850e-47 |
| Msa0376340 | Msa0379380 | 0.800873 | 1.174802e-48 | -8.615850e-47 |
| Msa0379380 | Msa0379410 | 0.890456 | 9.697263e-74 | -8.615850e-47 |
| Msa0379380 | Msa0387910 | 0.823320 | 1.476010e-53 | -8.615850e-47 |
| Msa0379380 | Msa0404090 | 0.956617 | 1.930357e-114 | -8.615850e-47 |
| Msa0379380 | Msa0467220 | 0.802404 | 5.701173e-49 | -8.615850e-47 |
| Msa0379380 | Msa0475240 | 0.848361 | 6.437127e-60 | -8.615850e-47 |
| Msa0379380 | Msa0579350 | 0.800957 | 1.129445e-48 | -8.615850e-47 |
| Msa0379380 | Msa0755080 | 0.812261 | 4.634228e-51 | -8.615850e-47 |
| Msa0379380 | Msa0759970 | 0.818471 | 1.926943e-52 | -8.615850e-47 |
| Msa0379380 | Msa0834450 | 0.820093 | 8.226859e-53 | -8.615850e-47 |
| Msa0379380 | Msa0928030 | 0.824711 | 6.959498e-54 | -8.615850e-47 |
| Msa0379380 | Msa1088290 | 0.800481 | 1.412518e-48 | -8.615850e-47 |
| Msa0379380 | Msa1465960 | 0.851908 | 6.530361e-61 | -8.615850e-47 |
| Msa0266210 | Msa0379380 | 0.801605 | 8.322105e-49 | -8.615850e-47 |
| Msa0287670 | Msa0379380 | 0.800625 | 1.319997e-48 | -8.615850e-47 |
| Msa0308770 | Msa0379380 | 0.808406 | 3.146146e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379380 | MtrunA17_Chr3g0132391 | 96.303 | 595 | 17 | 2 | 1 | 594 | 1 | 591 | 0.0 | 1185 |
| Msa0379380 | MtrunA17_Chr8g0389131 | 46.828 | 536 | 248 | 12 | 84 | 593 | 58 | 582 | 7.17e-154 | 461 |
| Msa0379380 | MtrunA17_Chr7g0259581 | 39.919 | 491 | 242 | 16 | 104 | 592 | 203 | 642 | 1.54e-96 | 313 |
| Msa0379380 | MtrunA17_Chr1g0197251 | 28.354 | 395 | 232 | 14 | 169 | 519 | 249 | 636 | 6.48e-23 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0379380 | AT4G09020.1 | 71.647 | 589 | 155 | 3 | 6 | 594 | 2 | 578 | 0.0 | 878 |
| Msa0379380 | AT2G39930.3 | 47.601 | 521 | 229 | 12 | 102 | 592 | 70 | 576 | 1.71e-153 | 456 |
| Msa0379380 | AT2G39930.2 | 47.601 | 521 | 229 | 12 | 102 | 592 | 70 | 576 | 7.70e-153 | 455 |
| Msa0379380 | AT2G39930.1 | 47.601 | 521 | 229 | 12 | 102 | 592 | 70 | 576 | 1.41e-151 | 455 |
| Msa0379380 | AT1G03310.2 | 38.370 | 503 | 234 | 19 | 102 | 592 | 228 | 666 | 1.30e-88 | 293 |
| Msa0379380 | AT1G03310.1 | 38.370 | 503 | 234 | 19 | 102 | 592 | 228 | 666 | 1.30e-88 | 293 |
| Msa0379380 | AT5G04360.1 | 27.294 | 425 | 226 | 18 | 108 | 486 | 207 | 594 | 2.16e-23 | 105 |
| Msa0379380 | AT5G04360.2 | 27.294 | 425 | 226 | 18 | 108 | 486 | 207 | 594 | 2.16e-23 | 105 |
Find 159 sgRNAs with CRISPR-Local
Find 585 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTATACATAGGTTATTT+TGG | 0.101279 | 3_1:+80500907 | Msa0379380:intron |
| ATTGAAGGTCGAAGATATTT+TGG | 0.134802 | 3_1:+80499477 | Msa0379380:CDS |
| AGCTTTGCAACTCGTGTTTC+TGG | 0.153163 | 3_1:+80504548 | Msa0379380:CDS |
| AATATCTAAATTTACCTTTC+AGG | 0.162754 | 3_1:-80497599 | None:intergenic |
| GAAGAATTACCCGAAATTTC+CGG | 0.220180 | 3_1:-80496498 | None:intergenic |
| AATTCAGTCGCCGGAAATTT+CGG | 0.228870 | 3_1:+80496488 | Msa0379380:CDS |
| AGCGCGCAATGCGATATTTA+TGG | 0.233958 | 3_1:-80496280 | None:intergenic |
| AGGAAATTGTCTAAGTTTCT+AGG | 0.236363 | 3_1:+80499510 | Msa0379380:CDS |
| ATTCAGTCGCCGGAAATTTC+GGG | 0.240981 | 3_1:+80496489 | Msa0379380:CDS |
| AAGAATACCTCGGCAATATT+TGG | 0.242789 | 3_1:-80499585 | None:intergenic |
| CACATGTCCTAGGGTGATTC+TGG | 0.269164 | 3_1:+80504515 | Msa0379380:intron |
| ATTTCGTGGCATAGATAATA+AGG | 0.302515 | 3_1:+80500985 | Msa0379380:CDS |
| CAAACAAAACAGGGGATATC+TGG | 0.318632 | 3_1:+80498745 | Msa0379380:CDS |
| ACCATGTGATCTCTGGGATT+TGG | 0.340416 | 3_1:-80500221 | None:intergenic |
| TAACCATTTGCTTCAACTCT+TGG | 0.345521 | 3_1:-80500737 | None:intergenic |
| GGAAATATCGTGATGATATA+CGG | 0.347322 | 3_1:+80504233 | Msa0379380:CDS |
| TCAATGCTCCTCCCCTCATC+AGG | 0.348034 | 3_1:+80502495 | Msa0379380:CDS |
| AATGCTAATGCTAATGCTTA+TGG | 0.348338 | 3_1:+80496807 | Msa0379380:CDS |
| GATCCTCATTCAAACAAAAC+AGG | 0.359852 | 3_1:+80498735 | Msa0379380:CDS |
| TTGTAGCACAACGAAGCTAA+TGG | 0.370505 | 3_1:+80505453 | Msa0379380:intron |
| TCCGGCGCCGGCATCGTTCC+TGG | 0.375249 | 3_1:+80496461 | Msa0379380:CDS |
| TTCTTGAAGGGCAGAGTAAT+GGG | 0.375625 | 3_1:-80496403 | None:intergenic |
| TGTAGCACAACGAAGCTAAT+GGG | 0.376583 | 3_1:+80505454 | Msa0379380:intron |
| CCTTACACTACTTCATTTCG+TGG | 0.377825 | 3_1:+80500971 | Msa0379380:CDS |
| ATAATTTACCATGTGATCTC+TGG | 0.381085 | 3_1:-80500228 | None:intergenic |
| GTAGTCCATACCAATGTCTT+AGG | 0.389694 | 3_1:-80501956 | None:intergenic |
| CAAGAGAAGGTTTCAAGCTT+AGG | 0.393866 | 3_1:+80496766 | Msa0379380:CDS |
| TTGTAACCATCCTGTGGTTA+TGG | 0.397934 | 3_1:+80501917 | Msa0379380:CDS |
| AATGAAGTAGTGTAAGGATT+AGG | 0.400159 | 3_1:-80500965 | None:intergenic |
| AACATTCGTGGAAGCTATCT+TGG | 0.400532 | 3_1:+80499922 | Msa0379380:CDS |
| GCGCGCAATGCGATATTTAT+GGG | 0.403355 | 3_1:-80496279 | None:intergenic |
| GATGAGGGGAGGAGCATTGA+GGG | 0.404227 | 3_1:-80502492 | None:intergenic |
| GATGCAATGATAACTTTAGT+TGG | 0.408830 | 3_1:+80505493 | Msa0379380:CDS |
| TAAAATTATTGCAGAGCCTT+GGG | 0.413250 | 3_1:+80503418 | Msa0379380:CDS |
| AAGTTTAGTAAGCAAACATC+TGG | 0.417882 | 3_1:+80496631 | Msa0379380:CDS |
| CTCTATGCCAGCAGAATGTA+AGG | 0.420920 | 3_1:-80500763 | None:intergenic |
| ACAAAATTAATACCATGATA+TGG | 0.425640 | 3_1:-80505308 | None:intergenic |
| AGATTGATGGACCTCAAGAC+TGG | 0.429638 | 3_1:+80499397 | Msa0379380:CDS |
| CATTGATACCAAGCTCTAGA+AGG | 0.430604 | 3_1:-80500145 | None:intergenic |
| AGTCTTGAGGTCCATCAATC+TGG | 0.432957 | 3_1:-80499395 | None:intergenic |
| AACCATTTGCTTCAACTCTT+GGG | 0.434675 | 3_1:-80500736 | None:intergenic |
| GCACTAGCATAGCGACTCAT+AGG | 0.441731 | 3_1:-80500690 | None:intergenic |
| AATGGGGAAGGTGGAAATGA+TGG | 0.441846 | 3_1:+80505471 | Msa0379380:CDS |
| AACTCTTGGGAAGCATTAGC+TGG | 0.453115 | 3_1:-80500723 | None:intergenic |
| AAGTATTACCGATCCCAATT+CGG | 0.454073 | 3_1:-80503473 | None:intergenic |
| TCTTGTTTCATACAACTTCA+AGG | 0.458629 | 3_1:+80505361 | Msa0379380:CDS |
| GTAAAATTATTGCAGAGCCT+TGG | 0.459216 | 3_1:+80503417 | Msa0379380:CDS |
| GATGCCGGCGCCGGAGAAAA+CGG | 0.463970 | 3_1:-80496453 | None:intergenic |
| TGAGGGGAGGAGCATTGAGG+GGG | 0.464609 | 3_1:-80502490 | None:intergenic |
| TCATTGTGCAGGATCTTCCT+AGG | 0.466830 | 3_1:+80499352 | Msa0379380:intron |
| ATCTCATCAAACTCAAAGAT+AGG | 0.469010 | 3_1:-80500182 | None:intergenic |
| CTAGGGTGATTCTGGTATGA+AGG | 0.470733 | 3_1:+80504523 | Msa0379380:intron |
| CCTTATGCAAAACTAATTGA+AGG | 0.472436 | 3_1:+80499462 | Msa0379380:CDS |
| GATTGAGTGGCTGTTCTTGA+AGG | 0.478693 | 3_1:-80496416 | None:intergenic |
| TATCTTTGAGTTTGATGAGA+TGG | 0.479374 | 3_1:+80500184 | Msa0379380:CDS |
| CGCTATGCTAGTGCTGGTGG+AGG | 0.480924 | 3_1:+80500699 | Msa0379380:CDS |
| GTAGGTGGGCTGAATGGAAT+GGG | 0.489614 | 3_1:+80504212 | Msa0379380:intron |
| GTTAAAGCCTTACATTCTGC+TGG | 0.489939 | 3_1:+80500756 | Msa0379380:CDS |
| GGACAATTGCTGAACTTCTC+CGG | 0.490724 | 3_1:+80501407 | Msa0379380:CDS |
| ACCAGGAACGATGCCGGCGC+CGG | 0.491472 | 3_1:-80496462 | None:intergenic |
| CCACGAAATGAAGTAGTGTA+AGG | 0.493976 | 3_1:-80500971 | None:intergenic |
| TTCCCAAGAGTTGAAGCAAA+TGG | 0.494723 | 3_1:+80500734 | Msa0379380:CDS |
| TGTGGAGGTCTATATCTTGT+TGG | 0.496751 | 3_1:+80503443 | Msa0379380:CDS |
| CCATCATGGGAGACTTCTCC+AGG | 0.497759 | 3_1:+80497479 | Msa0379380:CDS |
| GATAACTTTAGTTGGAATTG+TGG | 0.498203 | 3_1:+80505501 | Msa0379380:CDS |
| GGACCTCAAGACTGGGGTAA+GGG | 0.501748 | 3_1:+80499405 | Msa0379380:CDS |
| TCTATAGGTTTATTACATGC+TGG | 0.503472 | 3_1:+80501376 | Msa0379380:intron |
| GTTCTTGAAGGGCAGAGTAA+TGG | 0.503539 | 3_1:-80496404 | None:intergenic |
| TAATTTACCATGTGATCTCT+GGG | 0.505388 | 3_1:-80500227 | None:intergenic |
| ATCCCACACCTTCTAGAGCT+TGG | 0.506100 | 3_1:+80500137 | Msa0379380:CDS |
| GGCATAGGTTAGACAAGAGA+AGG | 0.508231 | 3_1:+80496753 | Msa0379380:intron |
| AAAGATAAAATTACCACAGC+CGG | 0.511082 | 3_1:-80501426 | None:intergenic |
| TGCTCAAGAAGAGGTCCTTA+AGG | 0.512559 | 3_1:+80496833 | Msa0379380:CDS |
| GAGGGGAGGAGCATTGAGGG+GGG | 0.513118 | 3_1:-80502489 | None:intergenic |
| CTGTACGGATACCAGATTGA+TGG | 0.514119 | 3_1:+80499384 | Msa0379380:CDS |
| TGTAGGTGGGCTGAATGGAA+TGG | 0.514806 | 3_1:+80504211 | Msa0379380:intron |
| GGATGGTGGTATGATAGAAC+TGG | 0.516922 | 3_1:+80498707 | Msa0379380:CDS |
| TTCTTGACAGCCTAAGACAT+TGG | 0.520511 | 3_1:+80501946 | Msa0379380:CDS |
| TGGTATGATAGAACTGGCTT+TGG | 0.523068 | 3_1:+80498713 | Msa0379380:CDS |
| GTGTATCACAAGTCGACAAT+GGG | 0.523496 | 3_1:+80497519 | Msa0379380:CDS |
| TTGCTGAACTTCTCCGGCTG+TGG | 0.523558 | 3_1:+80501413 | Msa0379380:CDS |
| TGGACCTCAAGACTGGGGTA+AGG | 0.527122 | 3_1:+80499404 | Msa0379380:CDS |
| TATATTTATTACCCTGATGA+GGG | 0.528876 | 3_1:-80502507 | None:intergenic |
| AATGGATGAATCTAGTGAGT+TGG | 0.529017 | 3_1:+80499894 | Msa0379380:CDS |
| TTTGATGTAGGTGGGCTGAA+TGG | 0.530787 | 3_1:+80504206 | Msa0379380:intron |
| CCTGGAGAAGTCTCCCATGA+TGG | 0.533738 | 3_1:-80497479 | None:intergenic |
| CCCAACGGAAAAGCTTGGCC+TGG | 0.534396 | 3_1:-80497497 | None:intergenic |
| GGAAGAAGCCATCGAAGTGA+TGG | 0.535096 | 3_1:+80497448 | Msa0379380:intron |
| ATGAGGGGAGGAGCATTGAG+GGG | 0.535884 | 3_1:-80502491 | None:intergenic |
| TCTAAATTTACCTTTCAGGA+AGG | 0.539587 | 3_1:-80497595 | None:intergenic |
| TGATGGAGAACAGACCATCA+TGG | 0.540649 | 3_1:+80497465 | Msa0379380:CDS |
| CCGGCGACTGAATTGCGACC+AGG | 0.542033 | 3_1:-80496479 | None:intergenic |
| TCTGTTCTCCATCACTTCGA+TGG | 0.545443 | 3_1:-80497456 | None:intergenic |
| TGATGAGGGGAGGAGCATTG+AGG | 0.545939 | 3_1:-80502493 | None:intergenic |
| TTTGTTTGCTCCTTCCTGAA+AGG | 0.546372 | 3_1:+80497585 | Msa0379380:CDS |
| CTTACATTCTGCTGGCATAG+AGG | 0.546875 | 3_1:+80500764 | Msa0379380:CDS |
| ATGAGTCGCTATGCTAGTGC+TGG | 0.548674 | 3_1:+80500693 | Msa0379380:CDS |
| GACCTCAAGACTGGGGTAAG+GGG | 0.549559 | 3_1:+80499406 | Msa0379380:CDS |
| CCGTACAGAACATTGCTCCT+AGG | 0.551992 | 3_1:-80499369 | None:intergenic |
| TAGGGTGATTCTGGTATGAA+GGG | 0.552990 | 3_1:+80504524 | Msa0379380:intron |
| TGATATACGGAAATTTATCA+AGG | 0.557611 | 3_1:+80504246 | Msa0379380:CDS |
| ATTGAGTGGCTGTTCTTGAA+GGG | 0.561613 | 3_1:-80496415 | None:intergenic |
| GCTTTCCAAGATTAATACGT+GGG | 0.562344 | 3_1:+80500641 | Msa0379380:intron |
| GATGGAGAACAGACCATCAT+GGG | 0.563202 | 3_1:+80497466 | Msa0379380:CDS |
| ATTGCGACCAGGAACGATGC+CGG | 0.563882 | 3_1:-80496468 | None:intergenic |
| TTTCTCCCCAGTCAAAAGGC+AGG | 0.564803 | 3_1:-80499551 | None:intergenic |
| GAGTTGGATAACAACATTCG+TGG | 0.564919 | 3_1:+80499910 | Msa0379380:CDS |
| TAGGGGAAGCATTGACACGC+TGG | 0.565015 | 3_1:+80498686 | Msa0379380:intron |
| CCTAGGAGCAATGTTCTGTA+CGG | 0.567471 | 3_1:+80499369 | Msa0379380:CDS |
| GATTGATGGACCTCAAGACT+GGG | 0.569307 | 3_1:+80499398 | Msa0379380:CDS |
| GGTGTTGAAGCATCTTGTGT+TGG | 0.570820 | 3_1:-80496382 | None:intergenic |
| AGTCGCTATGCTAGTGCTGG+TGG | 0.571734 | 3_1:+80500696 | Msa0379380:CDS |
| ATATATTTATTACCCTGATG+AGG | 0.573951 | 3_1:-80502508 | None:intergenic |
| CCTGGTCGCAATTCAGTCGC+CGG | 0.574029 | 3_1:+80496479 | Msa0379380:CDS |
| ATTGCAGAGCCTTGGGACTG+TGG | 0.586596 | 3_1:+80503425 | Msa0379380:CDS |
| ATACACCCAACGGAAAAGCT+TGG | 0.587014 | 3_1:-80497502 | None:intergenic |
| ATACTGTGTCGAGGAACTGA+TGG | 0.587782 | 3_1:+80502464 | Msa0379380:CDS |
| ATACCAAGCTCTAGAAGGTG+TGG | 0.587908 | 3_1:-80500140 | None:intergenic |
| GGTGTATCACAAGTCGACAA+TGG | 0.589086 | 3_1:+80497518 | Msa0379380:CDS |
| CTATCTTGGTGTAATTGAGA+AGG | 0.591718 | 3_1:+80499936 | Msa0379380:CDS |
| TGCCCCTTACCCCAGTCTTG+AGG | 0.593507 | 3_1:-80499408 | None:intergenic |
| AACAAGCGTAGACCATATCA+TGG | 0.593650 | 3_1:+80505296 | Msa0379380:CDS |
| TGAAATGAATCTAGAAGAGA+TGG | 0.595223 | 3_1:-80496308 | None:intergenic |
| AGAATTAGATCCATAACCAC+AGG | 0.596709 | 3_1:-80501927 | None:intergenic |
| GGAAGCATTGACACGCTGGA+TGG | 0.602937 | 3_1:+80498690 | Msa0379380:CDS |
| GCAGAGCCTTGGGACTGTGG+AGG | 0.605251 | 3_1:+80503428 | Msa0379380:CDS |
| ATTCATCCATTGTAAATGCA+CGG | 0.607129 | 3_1:-80499882 | None:intergenic |
| ATCCTCATTCAAACAAAACA+GGG | 0.607175 | 3_1:+80498736 | Msa0379380:CDS |
| AACGAAGCTAATGGGGAAGG+TGG | 0.609048 | 3_1:+80505462 | Msa0379380:CDS |
| AGCATTGACACGCTGGATGG+TGG | 0.615714 | 3_1:+80498693 | Msa0379380:CDS |
| CACAACGAAGCTAATGGGGA+AGG | 0.616197 | 3_1:+80505459 | Msa0379380:CDS |
| GTCACTGAGTATCATGTGGA+CGG | 0.618052 | 3_1:+80502419 | Msa0379380:CDS |
| TGTCTACAATCATACGAATG+AGG | 0.619074 | 3_1:+80500934 | Msa0379380:CDS |
| CAATCTTCCAAATATTGCCG+AGG | 0.622915 | 3_1:+80499578 | Msa0379380:CDS |
| CAATGCTCCTCCCCTCATCA+GGG | 0.623176 | 3_1:+80502496 | Msa0379380:CDS |
| TATTACATGCTGGACGACAA+AGG | 0.623828 | 3_1:+80501386 | Msa0379380:CDS |
| TCCAAATCCCAGAGATCACA+TGG | 0.625369 | 3_1:+80500220 | Msa0379380:CDS |
| TTTATTACCCTGATGAGGGG+AGG | 0.628848 | 3_1:-80502503 | None:intergenic |
| AGAGCTTGGTATCAATGCAG+TGG | 0.629888 | 3_1:+80500151 | Msa0379380:CDS |
| GTAGCACAACGAAGCTAATG+GGG | 0.632956 | 3_1:+80505455 | Msa0379380:intron |
| TTATGGTCGTGCTCAAGAAG+AGG | 0.634354 | 3_1:+80496824 | Msa0379380:CDS |
| TGCTTTCCAAGATTAATACG+TGG | 0.636373 | 3_1:+80500640 | Msa0379380:intron |
| TACCAAGCTCTAGAAGGTGT+GGG | 0.640740 | 3_1:-80500139 | None:intergenic |
| TATAGACCTCCACAGTCCCA+AGG | 0.643542 | 3_1:-80503434 | None:intergenic |
| ATATTTATTACCCTGATGAG+GGG | 0.649073 | 3_1:-80502506 | None:intergenic |
| CTTTCCAAGATTAATACGTG+GGG | 0.654915 | 3_1:+80500642 | Msa0379380:intron |
| TATCTGGCACATATGCATTG+AGG | 0.655122 | 3_1:+80498761 | Msa0379380:CDS |
| CTCGCAAGTATACTGTGTCG+AGG | 0.655283 | 3_1:+80502455 | Msa0379380:CDS |
| AGGGTGATTCTGGTATGAAG+GGG | 0.656811 | 3_1:+80504525 | Msa0379380:intron |
| GAATGTCCGTGCATTTACAA+TGG | 0.662609 | 3_1:+80499876 | Msa0379380:CDS |
| TAGGGTCACTGAGTATCATG+TGG | 0.663262 | 3_1:+80502415 | Msa0379380:intron |
| ATTGAATTGTAACCATCCTG+TGG | 0.664637 | 3_1:+80501911 | Msa0379380:CDS |
| TTTCCCAAACAAAATTCACG+TGG | 0.671508 | 3_1:+80496254 | None:intergenic |
| TGCGAAGAGTGTAGATTGAG+TGG | 0.674817 | 3_1:-80496429 | None:intergenic |
| TCCTCATTCAAACAAAACAG+GGG | 0.687927 | 3_1:+80498737 | Msa0379380:CDS |
| TCGACTTGTGATACACCCAA+CGG | 0.689996 | 3_1:-80497512 | None:intergenic |
| TTAGATCCATAACCACAGGA+TGG | 0.694789 | 3_1:-80501923 | None:intergenic |
| AAGCAAATCGAACTATAGTG+AGG | 0.714422 | 3_1:+80496654 | Msa0379380:CDS |
| ATTGATGGACCTCAAGACTG+GGG | 0.734499 | 3_1:+80499399 | Msa0379380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATACATTATAAAAACAA+AGG | - | chr3_1:80498667-80498686 | None:intergenic | 10.0% |
| !!! | TTGTTTTTATAATGTATTTT+AGG | + | chr3_1:80498667-80498686 | Msa0379380:intron | 10.0% |
| !!! | TGTTTTTATAATGTATTTTA+GGG | + | chr3_1:80498668-80498687 | Msa0379380:intron | 10.0% |
| !! | TCTTGAAATAATATAAAATA+AGG | - | chr3_1:80500862-80500881 | None:intergenic | 10.0% |
| !! | CAATTTATTCATAAATTTAA+GGG | - | chr3_1:80501697-80501716 | None:intergenic | 10.0% |
| !!! | AACTAAATAGTAAGAATTTT+AGG | + | chr3_1:80496555-80496574 | Msa0379380:intron | 15.0% |
| !!! | TGAATTTTGATTGAAAATTT+TGG | + | chr3_1:80496732-80496751 | Msa0379380:intron | 15.0% |
| !!! | TCGAAAATTTGAATTTTTTT+TGG | - | chr3_1:80497077-80497096 | None:intergenic | 15.0% |
| !! | TCAAATATAAATGAGTAAAT+AGG | - | chr3_1:80497298-80497317 | None:intergenic | 15.0% |
| !! | TAAAAAGATACTAAAAACAA+AGG | + | chr3_1:80498071-80498090 | Msa0379380:intron | 15.0% |
| !!! | ATATGTTTTTATTGTATCTT+CGG | + | chr3_1:80498132-80498151 | Msa0379380:intron | 15.0% |
| !!! | TTGGTTTTAAAAGTTAAAAA+TGG | - | chr3_1:80498397-80498416 | None:intergenic | 15.0% |
| !! | AATATTTCCATGAAAATTAT+TGG | + | chr3_1:80498617-80498636 | Msa0379380:intron | 15.0% |
| !!! | GTTTTTATAATGTATTTTAG+GGG | + | chr3_1:80498669-80498688 | Msa0379380:intron | 15.0% |
| !! | TGGTAAATAAAATTCATATT+CGG | - | chr3_1:80499027-80499046 | None:intergenic | 15.0% |
| !! | AAAATATTGACAATAATAGA+TGG | + | chr3_1:80499064-80499083 | Msa0379380:intron | 15.0% |
| !!! | TTAAAATCTTTGAAAGTAAT+TGG | + | chr3_1:80499129-80499148 | Msa0379380:intron | 15.0% |
| !!! | TAATTTTTTTTCCCATTTTA+AGG | + | chr3_1:80499198-80499217 | Msa0379380:intron | 15.0% |
| !! | ATATATTTCTTTATTAGGAA+GGG | - | chr3_1:80500454-80500473 | None:intergenic | 15.0% |
| !! | TATATATTTCTTTATTAGGA+AGG | - | chr3_1:80500455-80500474 | None:intergenic | 15.0% |
| !!! | AAAAACAATTTTATTCTTTC+TGG | + | chr3_1:80500474-80500493 | Msa0379380:intron | 15.0% |
| !!! | TTTGTTTCATTATCAATTTT+CGG | - | chr3_1:80501510-80501529 | None:intergenic | 15.0% |
| !!! | TCAATTTCTAGTTAATAATT+AGG | - | chr3_1:80501550-80501569 | None:intergenic | 15.0% |
| !! | TAATTATTAACTAGAAATTG+AGG | + | chr3_1:80501549-80501568 | Msa0379380:intron | 15.0% |
| !! | AATTATTAACTAGAAATTGA+GGG | + | chr3_1:80501550-80501569 | Msa0379380:intron | 15.0% |
| !! | GCAATTTATTCATAAATTTA+AGG | - | chr3_1:80501698-80501717 | None:intergenic | 15.0% |
| !! | AAATCATGTTAAAACAATAT+TGG | + | chr3_1:80502680-80502699 | Msa0379380:intron | 15.0% |
| !! | TCTAAAAAATAACTTAACAA+TGG | - | chr3_1:80503031-80503050 | None:intergenic | 15.0% |
| !! | AAATCTAAAAATTATAGTGA+TGG | - | chr3_1:80503267-80503286 | None:intergenic | 15.0% |
| !! | TAGTCATGTTTAAAAAAAAA+AGG | + | chr3_1:80503510-80503529 | Msa0379380:intron | 15.0% |
| !! | AGTCATGTTTAAAAAAAAAA+GGG | + | chr3_1:80503511-80503530 | Msa0379380:intron | 15.0% |
| !! | ATAAACATGATTATTAATGA+GGG | - | chr3_1:80503707-80503726 | None:intergenic | 15.0% |
| !! | AATAAACATGATTATTAATG+AGG | - | chr3_1:80503708-80503727 | None:intergenic | 15.0% |
| !! | TATATTACTAAGTAATTCAA+TGG | - | chr3_1:80504018-80504037 | None:intergenic | 15.0% |
| !! | TAAATAAAATCATATTGATG+CGG | - | chr3_1:80504078-80504097 | None:intergenic | 15.0% |
| !! | ATATGTAATTTAATATGATC+TGG | + | chr3_1:80504287-80504306 | Msa0379380:intron | 15.0% |
| !! | AAAAAGTAATTACATATTTG+TGG | - | chr3_1:80504807-80504826 | None:intergenic | 15.0% |
| !!! | TATAAAATAGTTTTTAACAG+TGG | + | chr3_1:80505241-80505260 | Msa0379380:intron | 15.0% |
| !!! | TTTTGATATACAATTCAAAA+TGG | - | chr3_1:80505407-80505426 | None:intergenic | 15.0% |
| !! | TACTATTTAGTTATAAGCAA+TGG | - | chr3_1:80496547-80496566 | None:intergenic | 20.0% |
| !!! | TGATTTTTAACGAATAATTC+AGG | + | chr3_1:80496998-80497017 | Msa0379380:intron | 20.0% |
| !!! | GATTTTTAACGAATAATTCA+GGG | + | chr3_1:80496999-80497018 | Msa0379380:intron | 20.0% |
| !! | GTTAAACGTTGTAAAATTTA+GGG | + | chr3_1:80497204-80497223 | Msa0379380:intron | 20.0% |
| !! | AATATCTAAATTTACCTTTC+AGG | - | chr3_1:80497602-80497621 | None:intergenic | 20.0% |
| !! | AAAATAAAGATCTATCTCTT+TGG | - | chr3_1:80497914-80497933 | None:intergenic | 20.0% |
| !! | TAAGAATTCTATGTCAAAAA+CGG | + | chr3_1:80498308-80498327 | Msa0379380:intron | 20.0% |
| !!! | TTTTGACAAGATTAATACAA+TGG | - | chr3_1:80498986-80499005 | None:intergenic | 20.0% |
| !!! | TTGTCAAAAATGTCTTATTA+TGG | + | chr3_1:80498997-80499016 | Msa0379380:intron | 20.0% |
| !! | GGTAAATAAAATTCATATTC+GGG | - | chr3_1:80499026-80499045 | None:intergenic | 20.0% |
| !!! | ATTAGCTTAAAACTATTTGT+AGG | + | chr3_1:80499684-80499703 | Msa0379380:intron | 20.0% |
| !! | TTAGCTTAAAACTATTTGTA+GGG | + | chr3_1:80499685-80499704 | Msa0379380:intron | 20.0% |
| !! | TTTATGAAGAAACATATCAT+AGG | - | chr3_1:80499786-80499805 | None:intergenic | 20.0% |
| !! | AGCATAATGAATACATAAAA+TGG | - | chr3_1:80499815-80499834 | None:intergenic | 20.0% |
| !!! | ATTAGTTCCTTTATTTATTG+GGG | - | chr3_1:80500307-80500326 | None:intergenic | 20.0% |
| !!! | GATTAGTTCCTTTATTTATT+GGG | - | chr3_1:80500308-80500327 | None:intergenic | 20.0% |
| !!! | AGATTAGTTCCTTTATTTAT+TGG | - | chr3_1:80500309-80500328 | None:intergenic | 20.0% |
| !!! | TTTCTATTATCATAGTTTTG+GGG | - | chr3_1:80500414-80500433 | None:intergenic | 20.0% |
| !!! | CTTTCTATTATCATAGTTTT+GGG | - | chr3_1:80500415-80500434 | None:intergenic | 20.0% |
| !! | AACCATATAGAACAAAAAAA+AGG | - | chr3_1:80501075-80501094 | None:intergenic | 20.0% |
| !!! | ATTCGCATCTTTATTTTATT+TGG | - | chr3_1:80501236-80501255 | None:intergenic | 20.0% |
| !!! | AAAAGCATTATATATGACTT+TGG | + | chr3_1:80501263-80501282 | Msa0379380:intron | 20.0% |
| !! | TAAACTTTCTTCATTTCTAT+AGG | + | chr3_1:80501361-80501380 | Msa0379380:intron | 20.0% |
| !!! | TTTCTAGTTAATAATTAGGA+GGG | - | chr3_1:80501546-80501565 | None:intergenic | 20.0% |
| !!! | ATTTCTAGTTAATAATTAGG+AGG | - | chr3_1:80501547-80501566 | None:intergenic | 20.0% |
| !! | TTTATGAATAAATTGCAAAG+CGG | + | chr3_1:80501702-80501721 | Msa0379380:intron | 20.0% |
| !! | TGATACAATATACTGAAATT+TGG | - | chr3_1:80501841-80501860 | None:intergenic | 20.0% |
| !! | TAATGTTTGACTATCTTTAA+TGG | + | chr3_1:80502251-80502270 | Msa0379380:intron | 20.0% |
| !!! | AGTACTATTTTTTGTGTTTT+TGG | + | chr3_1:80502379-80502398 | Msa0379380:intron | 20.0% |
| !!! | TTTTGGTTTCATTTTATTGT+AGG | + | chr3_1:80502396-80502415 | Msa0379380:intron | 20.0% |
| !!! | TTTGGTTTCATTTTATTGTA+GGG | + | chr3_1:80502397-80502416 | Msa0379380:intron | 20.0% |
| !! | ATATAGTTATAATCAACAGT+AGG | + | chr3_1:80502536-80502555 | Msa0379380:intron | 20.0% |
| !! | TATAGTTATAATCAACAGTA+GGG | + | chr3_1:80502537-80502556 | Msa0379380:intron | 20.0% |
| !! | ATACAACACTTCAAAAAATT+CGG | + | chr3_1:80502732-80502751 | Msa0379380:intron | 20.0% |
| !!! | TTAACTTTATTTACTTTCAC+AGG | + | chr3_1:80503364-80503383 | Msa0379380:intron | 20.0% |
| !! | TAAACATGATTATTAATGAG+GGG | - | chr3_1:80503706-80503725 | None:intergenic | 20.0% |
| !! | AATAATCTTCGATAGTATAA+AGG | + | chr3_1:80503814-80503833 | Msa0379380:intron | 20.0% |
| !!! | AGTTTGATATTTGATTTTTG+CGG | + | chr3_1:80503842-80503861 | Msa0379380:intron | 20.0% |
| !!! | TATTTTTCATTCTTAATCTC+TGG | - | chr3_1:80503940-80503959 | None:intergenic | 20.0% |
| !! | TTGAATATTAGTTCATCTAT+GGG | + | chr3_1:80504131-80504150 | Msa0379380:intron | 20.0% |
| !! | ACATCAAAGAAAAATATCAA+TGG | - | chr3_1:80504194-80504213 | None:intergenic | 20.0% |
| !!! | TTGATATTTTTCTTTGATGT+AGG | + | chr3_1:80504194-80504213 | Msa0379380:intron | 20.0% |
| !! | AATTTATCAAGGTAATTCTA+AGG | + | chr3_1:80504257-80504276 | Msa0379380:intron | 20.0% |
| !! | ATTTATCAAGGTAATTCTAA+GGG | + | chr3_1:80504258-80504277 | Msa0379380:intron | 20.0% |
| !! | CAATACAATTTACAATAAGA+TGG | + | chr3_1:80504338-80504357 | Msa0379380:intron | 20.0% |
| !!! | TTTTTTCTTTTGGTCTTTAT+GGG | + | chr3_1:80505044-80505063 | Msa0379380:intron | 20.0% |
| !!! | AACTAGTTTAATATAGCTTA+TGG | + | chr3_1:80505079-80505098 | Msa0379380:intron | 20.0% |
| !! | TATTAATGTGTTGAAGTTAT+GGG | + | chr3_1:80505173-80505192 | Msa0379380:intron | 20.0% |
| !!! | GATTTTCATTTCACTTTATT+CGG | + | chr3_1:80505215-80505234 | Msa0379380:intron | 20.0% |
| !! | ACAAAATTAATACCATGATA+TGG | - | chr3_1:80505311-80505330 | None:intergenic | 20.0% |
| !!! | TTGATTGAAAATTTTGGCAT+AGG | + | chr3_1:80496738-80496757 | Msa0379380:intron | 25.0% |
| ! | AGAATAAAAAAAGCCTAGAA+TGG | - | chr3_1:80496877-80496896 | None:intergenic | 25.0% |
| ! | GGTTAAACGTTGTAAAATTT+AGG | + | chr3_1:80497203-80497222 | Msa0379380:intron | 25.0% |
| !! | GTCTTACCTTTTACAATTTT+AGG | + | chr3_1:80497427-80497446 | Msa0379380:intron | 25.0% |
| ! | CTTCTTCCTAAAATTGTAAA+AGG | - | chr3_1:80497436-80497455 | None:intergenic | 25.0% |
| !! | TTTGGTTTCTAAAAACTGTT+GGG | + | chr3_1:80497722-80497741 | Msa0379380:intron | 25.0% |
| !!! | GAAGATTTTGAGATTGATTT+AGG | + | chr3_1:80497942-80497961 | Msa0379380:intron | 25.0% |
| !!! | TGAGAGATTAGTTTTTTAGA+TGG | + | chr3_1:80498003-80498022 | Msa0379380:intron | 25.0% |
| !! | TAAGCTAATGGGTAATTTAA+TGG | + | chr3_1:80498210-80498229 | Msa0379380:intron | 25.0% |
| ! | TGGGTAATTTAATGGAAAAA+TGG | + | chr3_1:80498218-80498237 | Msa0379380:intron | 25.0% |
| !! | CAAAGCATAAATTTTATAGC+AGG | - | chr3_1:80498577-80498596 | None:intergenic | 25.0% |
| ! | TTTCATGGAAATATTAGTCA+GGG | - | chr3_1:80498612-80498631 | None:intergenic | 25.0% |
| !! | TTTTCATGGAAATATTAGTC+AGG | - | chr3_1:80498613-80498632 | None:intergenic | 25.0% |
| ! | TTCATCTATGCAATTATGAA+AGG | - | chr3_1:80498906-80498925 | None:intergenic | 25.0% |
| ! | AGCTAAATGTGTGTTATAAA+TGG | - | chr3_1:80499308-80499327 | None:intergenic | 25.0% |
| !! | AAAATCTTTTCCCTAAATCA+AGG | + | chr3_1:80499645-80499664 | Msa0379380:intron | 25.0% |
| ! | AACAGCTATATTCCTAAAAT+TGG | - | chr3_1:80500033-80500052 | None:intergenic | 25.0% |
| ! | TGAATATCCCCAATAAATAA+AGG | + | chr3_1:80500297-80500316 | Msa0379380:intron | 25.0% |
| !! | CCTTTCTATTATCATAGTTT+TGG | - | chr3_1:80500416-80500435 | None:intergenic | 25.0% |
| ! | CCAAAACTATGATAATAGAA+AGG | + | chr3_1:80500413-80500432 | Msa0379380:intron | 25.0% |
| ! | AATAGAAAGGAAAAATACAG+AGG | + | chr3_1:80500426-80500445 | Msa0379380:intron | 25.0% |
| !!! | ATGTTTTTTTTTTCCTTCGA+TGG | + | chr3_1:80500549-80500568 | Msa0379380:intron | 25.0% |
| ! | ATATAAAATAAGGCAGAATC+AGG | - | chr3_1:80500852-80500871 | None:intergenic | 25.0% |
| ! | GATAAATCTTCTCTATACAT+AGG | + | chr3_1:80500898-80500917 | Msa0379380:intron | 25.0% |
| !! | TCTCTATACATAGGTTATTT+TGG | + | chr3_1:80500907-80500926 | Msa0379380:intron | 25.0% |
| !!! | TGCCTTTTTTTTGTTCTATA+TGG | + | chr3_1:80501070-80501089 | Msa0379380:intron | 25.0% |
| ! | AGTAGAGTAATTGTAATACA+TGG | - | chr3_1:80501116-80501135 | None:intergenic | 25.0% |
| ! | AAAATAAAGATGCGAATGTT+AGG | + | chr3_1:80501239-80501258 | Msa0379380:intron | 25.0% |
| ! | ACAATATACTGAAATTTGGT+TGG | - | chr3_1:80501837-80501856 | None:intergenic | 25.0% |
| ! | ATTAGGTAAATTCCACAAAA+TGG | - | chr3_1:80502018-80502037 | None:intergenic | 25.0% |
| ! | AATTAGTATAAATGACTCAC+AGG | - | chr3_1:80502183-80502202 | None:intergenic | 25.0% |
| ! | ACTAAGTCAGTAATCAATAA+AGG | + | chr3_1:80502203-80502222 | Msa0379380:intron | 25.0% |
| ! | TATATTTATTACCCTGATGA+GGG | - | chr3_1:80502510-80502529 | None:intergenic | 25.0% |
| ! | ATATATTTATTACCCTGATG+AGG | - | chr3_1:80502511-80502530 | None:intergenic | 25.0% |
| ! | CATTTATAATTGATGAGCTA+AGG | + | chr3_1:80502565-80502584 | Msa0379380:intron | 25.0% |
| !! | ATCAGTTTGGTTCATTTATT+TGG | + | chr3_1:80502651-80502670 | Msa0379380:intron | 25.0% |
| !! | TCAGTTTGGTTCATTTATTT+GGG | + | chr3_1:80502652-80502671 | Msa0379380:intron | 25.0% |
| ! | AAACAATATTGGATTTGTGT+TGG | + | chr3_1:80502691-80502710 | Msa0379380:intron | 25.0% |
| !! | AGGTTAAATATCTGGTTTAA+TGG | + | chr3_1:80502904-80502923 | Msa0379380:intron | 25.0% |
| ! | AAACATGATTATTAATGAGG+GGG | - | chr3_1:80503705-80503724 | None:intergenic | 25.0% |
| ! | CTTGAATATTAGTTCATCTA+TGG | + | chr3_1:80504130-80504149 | Msa0379380:intron | 25.0% |
| ! | TGAATATTAGTTCATCTATG+GGG | + | chr3_1:80504132-80504151 | Msa0379380:intron | 25.0% |
| ! | TCAAAGAAAAATATCAATGG+AGG | - | chr3_1:80504191-80504210 | None:intergenic | 25.0% |
| !! | ATATTTTTCTTTGATGTAGG+TGG | + | chr3_1:80504197-80504216 | Msa0379380:intron | 25.0% |
| !! | TATTTTTCTTTGATGTAGGT+GGG | + | chr3_1:80504198-80504217 | Msa0379380:intron | 25.0% |
| ! | TGATATACGGAAATTTATCA+AGG | + | chr3_1:80504246-80504265 | Msa0379380:CDS | 25.0% |
| ! | AATTGTGTTTCCAATCAATA+TGG | + | chr3_1:80504392-80504411 | Msa0379380:intron | 25.0% |
| ! | ATTGTGTTTCCAATCAATAT+GGG | + | chr3_1:80504393-80504412 | Msa0379380:intron | 25.0% |
| ! | TGTATGATAAACTATTGTCT+TGG | - | chr3_1:80504778-80504797 | None:intergenic | 25.0% |
| ! | TAAGAAGCCATCATAATTTA+AGG | + | chr3_1:80504855-80504874 | Msa0379380:intron | 25.0% |
| ! | AGAACAACCTTAAATTATGA+TGG | - | chr3_1:80504865-80504884 | None:intergenic | 25.0% |
| !!! | TGATCTTGAGTTTTTTCTTT+TGG | + | chr3_1:80505034-80505053 | Msa0379380:intron | 25.0% |
| !!! | GTTTTTTCTTTTGGTCTTTA+TGG | + | chr3_1:80505043-80505062 | Msa0379380:intron | 25.0% |
| ! | CTATTAATGTGTTGAAGTTA+TGG | + | chr3_1:80505172-80505191 | Msa0379380:intron | 25.0% |
| ! | GATATACAATTCAAAATGGA+AGG | - | chr3_1:80505403-80505422 | None:intergenic | 25.0% |
| TGAAATGAATCTAGAAGAGA+TGG | - | chr3_1:80496311-80496330 | None:intergenic | 30.0% | |
| CTTGAATCGATCTTATGATT+AGG | + | chr3_1:80496605-80496624 | Msa0379380:intron | 30.0% | |
| AAGTTTAGTAAGCAAACATC+TGG | + | chr3_1:80496631-80496650 | Msa0379380:CDS | 30.0% | |
| AATGCTAATGCTAATGCTTA+TGG | + | chr3_1:80496807-80496826 | Msa0379380:CDS | 30.0% | |
| TCGTTGACATAAATACCTTA+AGG | - | chr3_1:80496851-80496870 | None:intergenic | 30.0% | |
| TTTAACCGTTAAGTAACTCA+GGG | + | chr3_1:80496935-80496954 | Msa0379380:intron | 30.0% | |
| GATAGTAAGTGACATAATTC+AGG | + | chr3_1:80496967-80496986 | Msa0379380:intron | 30.0% | |
| ! | TCTAGCTATTTCGATTAATC+TGG | + | chr3_1:80497231-80497250 | Msa0379380:intron | 30.0% |
| ! | CTAGCTATTTCGATTAATCT+GGG | + | chr3_1:80497232-80497251 | Msa0379380:intron | 30.0% |
| ! | TAGCTATTTCGATTAATCTG+GGG | + | chr3_1:80497233-80497252 | Msa0379380:intron | 30.0% |
| !! | GATCGACTTGTATAAATTCA+AGG | + | chr3_1:80497264-80497283 | Msa0379380:intron | 30.0% |
| !!! | GCTTTTGACTGCTATTTTAA+CGG | + | chr3_1:80497370-80497389 | Msa0379380:intron | 30.0% |
| TCTAAATTTACCTTTCAGGA+AGG | - | chr3_1:80497598-80497617 | None:intergenic | 30.0% | |
| !!! | GCATTTTTGTGATTAGTCTT+TGG | + | chr3_1:80497704-80497723 | Msa0379380:intron | 30.0% |
| ! | CTTTGGTTTCTAAAAACTGT+TGG | + | chr3_1:80497721-80497740 | Msa0379380:intron | 30.0% |
| !!! | TAGTTTTTTAGATGGTGATC+TGG | + | chr3_1:80498011-80498030 | Msa0379380:intron | 30.0% |
| !!! | AGTTTTTTAGATGGTGATCT+GGG | + | chr3_1:80498012-80498031 | Msa0379380:intron | 30.0% |
| AAAGGATATTTGTCACACTA+GGG | + | chr3_1:80498089-80498108 | Msa0379380:intron | 30.0% | |
| TTTATTGTATCTTCGGCTTA+AGG | + | chr3_1:80498139-80498158 | Msa0379380:intron | 30.0% | |
| TCTGACTTACTTAAGCTAAT+GGG | + | chr3_1:80498199-80498218 | Msa0379380:intron | 30.0% | |
| !! | AAAGTTTTAATCTGACTAGC+AGG | - | chr3_1:80498264-80498283 | None:intergenic | 30.0% |
| TGCTAGTCAGATTAAAACTT+TGG | + | chr3_1:80498263-80498282 | Msa0379380:intron | 30.0% | |
| GTTGCATGCAAAAGATATAT+TGG | - | chr3_1:80498416-80498435 | None:intergenic | 30.0% | |
| GCAACATATGTTCAATGAAT+TGG | + | chr3_1:80498431-80498450 | Msa0379380:intron | 30.0% | |
| !!! | GACTACATGTTGGTTTTTTT+TGG | + | chr3_1:80498472-80498491 | Msa0379380:intron | 30.0% |
| ! | AAGTGGACCAATAATTTTCA+TGG | - | chr3_1:80498627-80498646 | None:intergenic | 30.0% |
| AAAACTGTGTGAAACAAAAG+TGG | - | chr3_1:80498644-80498663 | None:intergenic | 30.0% | |
| ATCCTCATTCAAACAAAACA+GGG | + | chr3_1:80498736-80498755 | Msa0379380:CDS | 30.0% | |
| !!! | CCTTCAATTAGTTTTGCATA+AGG | - | chr3_1:80499465-80499484 | None:intergenic | 30.0% |
| CCTTATGCAAAACTAATTGA+AGG | + | chr3_1:80499462-80499481 | Msa0379380:CDS | 30.0% | |
| ! | ATTGAAGGTCGAAGATATTT+TGG | + | chr3_1:80499477-80499496 | Msa0379380:CDS | 30.0% |
| ! | TTGAAGGTCGAAGATATTTT+GGG | + | chr3_1:80499478-80499497 | Msa0379380:CDS | 30.0% |
| AGGAAATTGTCTAAGTTTCT+AGG | + | chr3_1:80499510-80499529 | Msa0379380:CDS | 30.0% | |
| TTGTATGAAGCCTTGATTTA+GGG | - | chr3_1:80499658-80499677 | None:intergenic | 30.0% | |
| TTTGTATGAAGCCTTGATTT+AGG | - | chr3_1:80499659-80499678 | None:intergenic | 30.0% | |
| ATTCATCCATTGTAAATGCA+CGG | - | chr3_1:80499885-80499904 | None:intergenic | 30.0% | |
| TATATTCCTAAAATTGGAGG+TGG | - | chr3_1:80500027-80500046 | None:intergenic | 30.0% | |
| AGCTATATTCCTAAAATTGG+AGG | - | chr3_1:80500030-80500049 | None:intergenic | 30.0% | |
| ATCTCATCAAACTCAAAGAT+AGG | - | chr3_1:80500185-80500204 | None:intergenic | 30.0% | |
| ! | TATCTTTGAGTTTGATGAGA+TGG | + | chr3_1:80500184-80500203 | Msa0379380:CDS | 30.0% |
| TAATTTACCATGTGATCTCT+GGG | - | chr3_1:80500230-80500249 | None:intergenic | 30.0% | |
| ATAATTTACCATGTGATCTC+TGG | - | chr3_1:80500231-80500250 | None:intergenic | 30.0% | |
| ! | AGTATCATATAATGCCACTT+AGG | - | chr3_1:80500606-80500625 | None:intergenic | 30.0% |
| GTATTTCAATGTCACAACTT+TGG | + | chr3_1:80500798-80500817 | Msa0379380:intron | 30.0% | |
| AATCAGGAGATCAAACTATT+AGG | - | chr3_1:80500836-80500855 | None:intergenic | 30.0% | |
| AATGAAGTAGTGTAAGGATT+AGG | - | chr3_1:80500968-80500987 | None:intergenic | 30.0% | |
| ATTTCGTGGCATAGATAATA+AGG | + | chr3_1:80500985-80501004 | Msa0379380:CDS | 30.0% | |
| TCTATAGGTTTATTACATGC+TGG | + | chr3_1:80501376-80501395 | Msa0379380:intron | 30.0% | |
| AAAGATAAAATTACCACAGC+CGG | - | chr3_1:80501429-80501448 | None:intergenic | 30.0% | |
| ATTCATATGAACAAAGCTGT+GGG | - | chr3_1:80501474-80501493 | None:intergenic | 30.0% | |
| AATTCATATGAACAAAGCTG+TGG | - | chr3_1:80501475-80501494 | None:intergenic | 30.0% | |
| ATATACTGAAATTTGGTTGG+AGG | - | chr3_1:80501834-80501853 | None:intergenic | 30.0% | |
| TCTAGAAAATGTTTATCCTC+AGG | + | chr3_1:80501882-80501901 | Msa0379380:intron | 30.0% | |
| ACAATTCAATGTATTTCCTG+AGG | - | chr3_1:80501901-80501920 | None:intergenic | 30.0% | |
| ! | ATATACCTTGATCCATTTTG+TGG | + | chr3_1:80502003-80502022 | Msa0379380:intron | 30.0% |
| AAATTCCACAAAATGGATCA+AGG | - | chr3_1:80502011-80502030 | None:intergenic | 30.0% | |
| AACAATGAAAAGCTGGTATT+AGG | - | chr3_1:80502035-80502054 | None:intergenic | 30.0% | |
| ACAAAAGAACAATGAAAAGC+TGG | - | chr3_1:80502042-80502061 | None:intergenic | 30.0% | |
| GTTTGTATATCACATAGACT+TGG | + | chr3_1:80502064-80502083 | Msa0379380:intron | 30.0% | |
| ! | CTTCAGAATTTGTAGTTTTC+TGG | + | chr3_1:80502089-80502108 | Msa0379380:intron | 30.0% |
| TATAAATGACTCACAGGAAA+GGG | - | chr3_1:80502177-80502196 | None:intergenic | 30.0% | |
| GAATTGAATTGTGATGCAAT+TGG | + | chr3_1:80502295-80502314 | Msa0379380:intron | 30.0% | |
| ! | AATCATGATGTTGGTTAGTT+TGG | - | chr3_1:80502335-80502354 | None:intergenic | 30.0% |
| TTCAACGAAAATCATGATGT+TGG | - | chr3_1:80502344-80502363 | None:intergenic | 30.0% | |
| ATATTTATTACCCTGATGAG+GGG | - | chr3_1:80502509-80502528 | None:intergenic | 30.0% | |
| TGATATGAGTGTTATCAGTT+TGG | + | chr3_1:80502638-80502657 | Msa0379380:intron | 30.0% | |
| TTCATGATTCTTAGATGTTG+TGG | + | chr3_1:80502795-80502814 | Msa0379380:intron | 30.0% | |
| TTCTTAGATGTTGTGGTAAT+TGG | + | chr3_1:80502802-80502821 | Msa0379380:intron | 30.0% | |
| AATCCAAACAAATAACAGAG+AGG | + | chr3_1:80502884-80502903 | Msa0379380:intron | 30.0% | |
| ! | TAACCTCTCTGTTATTTGTT+TGG | - | chr3_1:80502890-80502909 | None:intergenic | 30.0% |
| TAACAGAGAGGTTAAATATC+TGG | + | chr3_1:80502896-80502915 | Msa0379380:intron | 30.0% | |
| AAACCTACCCGATAAAAAAT+AGG | + | chr3_1:80502998-80503017 | Msa0379380:intron | 30.0% | |
| AACCTACCCGATAAAAAATA+GGG | + | chr3_1:80502999-80503018 | Msa0379380:intron | 30.0% | |
| !!! | ACTGAACCCTATTTTTTATC+GGG | - | chr3_1:80503008-80503027 | None:intergenic | 30.0% |
| !!! | GACTGAACCCTATTTTTTAT+CGG | - | chr3_1:80503009-80503028 | None:intergenic | 30.0% |
| TAACCTTGATTCCTTTAGTT+AGG | + | chr3_1:80503063-80503082 | Msa0379380:intron | 30.0% | |
| AACCTTGATTCCTTTAGTTA+GGG | + | chr3_1:80503064-80503083 | Msa0379380:intron | 30.0% | |
| TAAAATTATTGCAGAGCCTT+GGG | + | chr3_1:80503418-80503437 | Msa0379380:CDS | 30.0% | |
| AATCTTACGCATCATGATAT+TGG | + | chr3_1:80503748-80503767 | Msa0379380:intron | 30.0% | |
| AACATACAACAAAAAGACGA+AGG | - | chr3_1:80503891-80503910 | None:intergenic | 30.0% | |
| GGAAATATCGTGATGATATA+CGG | + | chr3_1:80504233-80504252 | Msa0379380:CDS | 30.0% | |
| !! | AACTGATTTTGTTATCTGCT+AGG | + | chr3_1:80504442-80504461 | Msa0379380:intron | 30.0% |
| CAACTCTTTAAGCTATTTAG+CGG | + | chr3_1:80504656-80504675 | Msa0379380:intron | 30.0% | |
| GCATCACTAAAAATAAAGAC+TGG | + | chr3_1:80504952-80504971 | Msa0379380:intron | 30.0% | |
| ! | TCTGTTTTATAGCAACATGA+TGG | + | chr3_1:80505125-80505144 | Msa0379380:intron | 30.0% |
| CTTCAACACATTAATAGAGT+GGG | - | chr3_1:80505169-80505188 | None:intergenic | 30.0% | |
| ACTTCAACACATTAATAGAG+TGG | - | chr3_1:80505170-80505189 | None:intergenic | 30.0% | |
| ! | TCTTGTTTCATACAACTTCA+AGG | + | chr3_1:80505361-80505380 | Msa0379380:CDS | 30.0% |
| CAAAATGGAAGGACAAAATT+TGG | - | chr3_1:80505392-80505411 | None:intergenic | 30.0% | |
| GATGCAATGATAACTTTAGT+TGG | + | chr3_1:80505493-80505512 | Msa0379380:CDS | 30.0% | |
| GATAACTTTAGTTGGAATTG+TGG | + | chr3_1:80505501-80505520 | Msa0379380:CDS | 30.0% | |
| GAAGAATTACCCGAAATTTC+CGG | - | chr3_1:80496501-80496520 | None:intergenic | 35.0% | |
| AAGCAAATCGAACTATAGTG+AGG | + | chr3_1:80496654-80496673 | Msa0379380:CDS | 35.0% | |
| CCTGATAAAAAAGTCTAACG+CGG | - | chr3_1:80496910-80496929 | None:intergenic | 35.0% | |
| !!! | CGCGTTAGACTTTTTTATCA+GGG | + | chr3_1:80496908-80496927 | Msa0379380:intron | 35.0% |
| GTTTAACCGTTAAGTAACTC+AGG | + | chr3_1:80496934-80496953 | Msa0379380:intron | 35.0% | |
| TTAACTGTGAGAATTGACGA+AGG | + | chr3_1:80497171-80497190 | Msa0379380:intron | 35.0% | |
| TAACTGTGAGAATTGACGAA+GGG | + | chr3_1:80497172-80497191 | Msa0379380:intron | 35.0% | |
| AATTGACGAAGGGACTAAAT+GGG | + | chr3_1:80497182-80497201 | Msa0379380:intron | 35.0% | |
| TGGGAAAATGTGATTGTATC+TGG | - | chr3_1:80497770-80497789 | None:intergenic | 35.0% | |
| !! | GACAAGGTTAGTTTCATGTT+TGG | - | chr3_1:80497837-80497856 | None:intergenic | 35.0% |
| CAGAGTGACAAATCATTAAG+AGG | - | chr3_1:80497866-80497885 | None:intergenic | 35.0% | |
| !! | TTTAGGAAGCATTAAGCGTT+TGG | + | chr3_1:80497959-80497978 | Msa0379380:intron | 35.0% |
| !! | TTAGGAAGCATTAAGCGTTT+GGG | + | chr3_1:80497960-80497979 | Msa0379380:intron | 35.0% |
| ! | TTCCTTTTGCATTATGGTGT+AGG | + | chr3_1:80498041-80498060 | Msa0379380:intron | 35.0% |
| TTCCTACACCATAATGCAAA+AGG | - | chr3_1:80498046-80498065 | None:intergenic | 35.0% | |
| CAAAGGATATTTGTCACACT+AGG | + | chr3_1:80498088-80498107 | Msa0379380:intron | 35.0% | |
| CTCTGACTTACTTAAGCTAA+TGG | + | chr3_1:80498198-80498217 | Msa0379380:intron | 35.0% | |
| TCCCCTTCAAAATTGTATGA+GGG | - | chr3_1:80498334-80498353 | None:intergenic | 35.0% | |
| ATCCCCTTCAAAATTGTATG+AGG | - | chr3_1:80498335-80498354 | None:intergenic | 35.0% | |
| GATCCTCATTCAAACAAAAC+AGG | + | chr3_1:80498735-80498754 | Msa0379380:CDS | 35.0% | |
| TCCTCATTCAAACAAAACAG+GGG | + | chr3_1:80498737-80498756 | Msa0379380:CDS | 35.0% | |
| ! | TTTACGACATATAAGAGTGC+TGG | - | chr3_1:80499047-80499066 | None:intergenic | 35.0% |
| CAAGTGATGAGCCTTAAAAT+GGG | - | chr3_1:80499212-80499231 | None:intergenic | 35.0% | |
| ACAAGTGATGAGCCTTAAAA+TGG | - | chr3_1:80499213-80499232 | None:intergenic | 35.0% | |
| TTCTTCATCTTTCATTGTGC+AGG | + | chr3_1:80499341-80499360 | Msa0379380:intron | 35.0% | |
| ! | TGAAGGTCGAAGATATTTTG+GGG | + | chr3_1:80499479-80499498 | Msa0379380:CDS | 35.0% |
| !! | GATATTTTGGGGATATTAGC+AGG | + | chr3_1:80499490-80499509 | Msa0379380:CDS | 35.0% |
| ! | TAATTTTCTCCCCAGTCAAA+AGG | - | chr3_1:80499558-80499577 | None:intergenic | 35.0% |
| AAGAATACCTCGGCAATATT+TGG | - | chr3_1:80499588-80499607 | None:intergenic | 35.0% | |
| ACAAAGCAAAGGTAGAATAC+AGG | - | chr3_1:80499711-80499730 | None:intergenic | 35.0% | |
| AATGGATGAATCTAGTGAGT+TGG | + | chr3_1:80499894-80499913 | Msa0379380:CDS | 35.0% | |
| ! | CTATCTTGGTGTAATTGAGA+AGG | + | chr3_1:80499936-80499955 | Msa0379380:CDS | 35.0% |
| TCTCCATTTCTCCATTACTA+CGG | + | chr3_1:80500329-80500348 | Msa0379380:intron | 35.0% | |
| ! | AAACCGTAGTAATGGAGAAA+TGG | - | chr3_1:80500335-80500354 | None:intergenic | 35.0% |
| ! | TTTCTCCATTACTACGGTTT+TGG | + | chr3_1:80500335-80500354 | Msa0379380:intron | 35.0% |
| ! | TTCTCCATTACTACGGTTTT+GGG | + | chr3_1:80500336-80500355 | Msa0379380:intron | 35.0% |
| ! | TGTAACTTTGACTTCCTAAG+TGG | + | chr3_1:80500589-80500608 | Msa0379380:intron | 35.0% |
| TGCTTTCCAAGATTAATACG+TGG | + | chr3_1:80500640-80500659 | Msa0379380:intron | 35.0% | |
| GCTTTCCAAGATTAATACGT+GGG | + | chr3_1:80500641-80500660 | Msa0379380:intron | 35.0% | |
| CTTTCCAAGATTAATACGTG+GGG | + | chr3_1:80500642-80500661 | Msa0379380:intron | 35.0% | |
| ATAACCCCACGTATTAATCT+TGG | - | chr3_1:80500649-80500668 | None:intergenic | 35.0% | |
| AACCATTTGCTTCAACTCTT+GGG | - | chr3_1:80500739-80500758 | None:intergenic | 35.0% | |
| TAACCATTTGCTTCAACTCT+TGG | - | chr3_1:80500740-80500759 | None:intergenic | 35.0% | |
| TGTCTACAATCATACGAATG+AGG | + | chr3_1:80500934-80500953 | Msa0379380:CDS | 35.0% | |
| ! | TGAAAGCTTTTCCACAAACA+AGG | - | chr3_1:80501142-80501161 | None:intergenic | 35.0% |
| TGAGGGCTACAATATTCAAA+AGG | + | chr3_1:80501567-80501586 | Msa0379380:intron | 35.0% | |
| GGAAAACTTTGCAATTGGTT+TGG | - | chr3_1:80501624-80501643 | None:intergenic | 35.0% | |
| ! | TTCTGGGAAAACTTTGCAAT+TGG | - | chr3_1:80501629-80501648 | None:intergenic | 35.0% |
| ACTACTTGGTTTCATGACTT+GGG | - | chr3_1:80501667-80501686 | None:intergenic | 35.0% | |
| TACTACTTGGTTTCATGACT+TGG | - | chr3_1:80501668-80501687 | None:intergenic | 35.0% | |
| TTAAGGGAATGCATACTACT+TGG | - | chr3_1:80501681-80501700 | None:intergenic | 35.0% | |
| ATTGAATTGTAACCATCCTG+TGG | + | chr3_1:80501911-80501930 | Msa0379380:CDS | 35.0% | |
| AGAATTAGATCCATAACCAC+AGG | - | chr3_1:80501930-80501949 | None:intergenic | 35.0% | |
| ATAAATGACTCACAGGAAAG+GGG | - | chr3_1:80502176-80502195 | None:intergenic | 35.0% | |
| GTATAAATGACTCACAGGAA+AGG | - | chr3_1:80502178-80502197 | None:intergenic | 35.0% | |
| AGTCAGTAATCAATAAAGGC+TGG | + | chr3_1:80502207-80502226 | Msa0379380:intron | 35.0% | |
| TTCGTTGAAGTTTCTAACTG+TGG | + | chr3_1:80502355-80502374 | Msa0379380:intron | 35.0% | |
| AAGAGCTAAGATACCACTTT+CGG | + | chr3_1:80502608-80502627 | Msa0379380:intron | 35.0% | |
| CAATACAAACACTGGAAACA+CGG | - | chr3_1:80502772-80502791 | None:intergenic | 35.0% | |
| ATGAACACCAATACAAACAC+TGG | - | chr3_1:80502780-80502799 | None:intergenic | 35.0% | |
| TTGGTTGTACTACAAACTAC+AGG | + | chr3_1:80502821-80502840 | Msa0379380:intron | 35.0% | |
| TGGTTGTACTACAAACTACA+GGG | + | chr3_1:80502822-80502841 | Msa0379380:intron | 35.0% | |
| !!! | GTGCATAGGTCTAGTTTTAT+CGG | - | chr3_1:80502848-80502867 | None:intergenic | 35.0% |
| ! | TAAAGTGTTCCTAGAGCTAT+AGG | + | chr3_1:80502952-80502971 | Msa0379380:intron | 35.0% |
| ! | AAAGTGTTCCTAGAGCTATA+GGG | + | chr3_1:80502953-80502972 | Msa0379380:intron | 35.0% |
| !!! | AACCCTATTTTTTATCGGGT+AGG | - | chr3_1:80503004-80503023 | None:intergenic | 35.0% |
| GAATTTGATGCCCTAACTAA+AGG | - | chr3_1:80503077-80503096 | None:intergenic | 35.0% | |
| AGTCCTCATAACTTCACTAT+TGG | + | chr3_1:80503126-80503145 | Msa0379380:intron | 35.0% | |
| TTGCCAATAGTGAAGTTATG+AGG | - | chr3_1:80503132-80503151 | None:intergenic | 35.0% | |
| TTCTCTCACTGCTAGAAAAT+TGG | + | chr3_1:80503312-80503331 | Msa0379380:intron | 35.0% | |
| TCTCTCACTGCTAGAAAATT+GGG | + | chr3_1:80503313-80503332 | Msa0379380:intron | 35.0% | |
| GTAAAATTATTGCAGAGCCT+TGG | + | chr3_1:80503417-80503436 | Msa0379380:CDS | 35.0% | |
| ! | TTGTTGGAAGTTTTCCGAAT+TGG | + | chr3_1:80503459-80503478 | Msa0379380:CDS | 35.0% |
| ! | TGTTGGAAGTTTTCCGAATT+GGG | + | chr3_1:80503460-80503479 | Msa0379380:CDS | 35.0% |
| AAGTATTACCGATCCCAATT+CGG | - | chr3_1:80503476-80503495 | None:intergenic | 35.0% | |
| TTAAAAAAAAAAGGGCAGCC+CGG | + | chr3_1:80503519-80503538 | Msa0379380:intron | 35.0% | |
| CTTGTGTAAAAAACAGGGTA+AGG | - | chr3_1:80503611-80503630 | None:intergenic | 35.0% | |
| !!! | TACCCTGTTTTTTACACAAG+AGG | + | chr3_1:80503611-80503630 | Msa0379380:intron | 35.0% |
| AGCCTCTTGTGTAAAAAACA+GGG | - | chr3_1:80503616-80503635 | None:intergenic | 35.0% | |
| ! | AATCTCTGGAAAAGTTGTCA+GGG | - | chr3_1:80503926-80503945 | None:intergenic | 35.0% |
| ! | TAATCTCTGGAAAAGTTGTC+AGG | - | chr3_1:80503927-80503946 | None:intergenic | 35.0% |
| ! | AGTTGACCGACATTAACTTT+TGG | - | chr3_1:80504049-80504068 | None:intergenic | 35.0% |
| TGGATTGTCTTTCTATTAGC+TGG | + | chr3_1:80504307-80504326 | Msa0379380:intron | 35.0% | |
| GGATTGTCTTTCTATTAGCT+GGG | + | chr3_1:80504308-80504327 | Msa0379380:intron | 35.0% | |
| ATGGATGACATGCTAGTAAA+AGG | + | chr3_1:80504357-80504376 | Msa0379380:intron | 35.0% | |
| ! | TTTCCAATCAATATGGGCTA+TGG | + | chr3_1:80504399-80504418 | Msa0379380:intron | 35.0% |
| ! | TTCCAATCAATATGGGCTAT+GGG | + | chr3_1:80504400-80504419 | Msa0379380:intron | 35.0% |
| TATGGGGAGTAAAAAACTCA+TGG | + | chr3_1:80504417-80504436 | Msa0379380:intron | 35.0% | |
| TCACTACTTATAGCACTTCA+TGG | + | chr3_1:80504597-80504616 | Msa0379380:intron | 35.0% | |
| !! | TAAAGAGTTGGTCTTTGATG+AGG | - | chr3_1:80504646-80504665 | None:intergenic | 35.0% |
| CGCTAAATAGCTTAAAGAGT+TGG | - | chr3_1:80504658-80504677 | None:intergenic | 35.0% | |
| ! | TAAGCTATTTAGCGGATGTT+TGG | + | chr3_1:80504664-80504683 | Msa0379380:intron | 35.0% |
| ! | AAGCTATTTAGCGGATGTTT+GGG | + | chr3_1:80504665-80504684 | Msa0379380:intron | 35.0% |
| TGACCAACATTGTTTACCAA+GGG | - | chr3_1:80504911-80504930 | None:intergenic | 35.0% | |
| TTGACCAACATTGTTTACCA+AGG | - | chr3_1:80504912-80504931 | None:intergenic | 35.0% | |
| AACCACAAATATTTAGCAGC+TGG | - | chr3_1:80505015-80505034 | None:intergenic | 35.0% | |
| CCTGAAAGACAAACAAATGA+AGG | - | chr3_1:80505274-80505293 | None:intergenic | 35.0% | |
| CCTTCATTTGTTTGTCTTTC+AGG | + | chr3_1:80505271-80505290 | Msa0379380:intron | 35.0% | |
| !!! | AATTTTGTTATTGCGCACGA+TGG | + | chr3_1:80505323-80505342 | Msa0379380:CDS | 35.0% |
| !!! | AGTTGGAATTGTGGTTTTGA+AGG | + | chr3_1:80505510-80505529 | Msa0379380:CDS | 35.0% |
| TTCTTGAAGGGCAGAGTAAT+GGG | - | chr3_1:80496406-80496425 | None:intergenic | 40.0% | |
| ATTGAGTGGCTGTTCTTGAA+GGG | - | chr3_1:80496418-80496437 | None:intergenic | 40.0% | |
| AATTCAGTCGCCGGAAATTT+CGG | + | chr3_1:80496488-80496507 | Msa0379380:CDS | 40.0% | |
| CAAGAGAAGGTTTCAAGCTT+AGG | + | chr3_1:80496766-80496785 | Msa0379380:CDS | 40.0% | |
| ATGTCAACGAACACCATTCT+AGG | + | chr3_1:80496861-80496880 | Msa0379380:intron | 40.0% | |
| AAAGTCTAACGCGGAGATAT+CGG | - | chr3_1:80496901-80496920 | None:intergenic | 40.0% | |
| !!! | CCGCGTTAGACTTTTTTATC+AGG | + | chr3_1:80496907-80496926 | Msa0379380:intron | 40.0% |
| TCGATCCCTGAGTTACTTAA+CGG | - | chr3_1:80496943-80496962 | None:intergenic | 40.0% | |
| GAAATTCGTCCTTGTACATG+TGG | + | chr3_1:80497098-80497117 | Msa0379380:intron | 40.0% | |
| AGTCAACTTCCACATGTACA+AGG | - | chr3_1:80497110-80497129 | None:intergenic | 40.0% | |
| TGTACATGTGGAAGTTGACT+TGG | + | chr3_1:80497110-80497129 | Msa0379380:intron | 40.0% | |
| ATTCTCACAGTTAACGATGC+TGG | - | chr3_1:80497165-80497184 | None:intergenic | 40.0% | |
| GAATTGACGAAGGGACTAAA+TGG | + | chr3_1:80497181-80497200 | Msa0379380:intron | 40.0% | |
| GTGTATCACAAGTCGACAAT+GGG | + | chr3_1:80497519-80497538 | Msa0379380:CDS | 40.0% | |
| TTTGTTTGCTCCTTCCTGAA+AGG | + | chr3_1:80497585-80497604 | Msa0379380:CDS | 40.0% | |
| ! | GGCCCTCATACAATTTTGAA+GGG | + | chr3_1:80498329-80498348 | Msa0379380:intron | 40.0% |
| !! | GCCCTCATACAATTTTGAAG+GGG | + | chr3_1:80498330-80498349 | Msa0379380:intron | 40.0% |
| !! | TACAATTTTGAAGGGGATGC+AGG | + | chr3_1:80498337-80498356 | Msa0379380:intron | 40.0% |
| TCTGTAGCATGACTACATGT+TGG | + | chr3_1:80498462-80498481 | Msa0379380:intron | 40.0% | |
| TTCCTTGATTGCACTATTGC+TGG | + | chr3_1:80498545-80498564 | Msa0379380:intron | 40.0% | |
| TTCCAGCAATAGTGCAATCA+AGG | - | chr3_1:80498550-80498569 | None:intergenic | 40.0% | |
| ! | TGGTATGATAGAACTGGCTT+TGG | + | chr3_1:80498713-80498732 | Msa0379380:CDS | 40.0% |
| !!! | TCCCCTGTTTTGTTTGAATG+AGG | - | chr3_1:80498741-80498760 | None:intergenic | 40.0% |
| CAAACAAAACAGGGGATATC+TGG | + | chr3_1:80498745-80498764 | Msa0379380:CDS | 40.0% | |
| TATCTGGCACATATGCATTG+AGG | + | chr3_1:80498761-80498780 | Msa0379380:CDS | 40.0% | |
| ! | TGTAGCCTTTCCATGGTTTT+TGG | + | chr3_1:80498814-80498833 | Msa0379380:intron | 40.0% |
| TTCAGCCAAAAACCATGGAA+AGG | - | chr3_1:80498822-80498841 | None:intergenic | 40.0% | |
| ACAGTTTCAGCCAAAAACCA+TGG | - | chr3_1:80498827-80498846 | None:intergenic | 40.0% | |
| CAATCTTCCAAATATTGCCG+AGG | + | chr3_1:80499578-80499597 | Msa0379380:CDS | 40.0% | |
| GTTATGCAGGAAGAATACCT+CGG | - | chr3_1:80499598-80499617 | None:intergenic | 40.0% | |
| TCGAGTAACTATCGTTATGC+AGG | - | chr3_1:80499611-80499630 | None:intergenic | 40.0% | |
| GAATGTCCGTGCATTTACAA+TGG | + | chr3_1:80499876-80499895 | Msa0379380:CDS | 40.0% | |
| GAGTTGGATAACAACATTCG+TGG | + | chr3_1:80499910-80499929 | Msa0379380:CDS | 40.0% | |
| AACATTCGTGGAAGCTATCT+TGG | + | chr3_1:80499922-80499941 | Msa0379380:CDS | 40.0% | |
| GTAACATCCGTGCTATCATT+GGG | + | chr3_1:80499958-80499977 | Msa0379380:intron | 40.0% | |
| TGTGATACCCAATGATAGCA+CGG | - | chr3_1:80499968-80499987 | None:intergenic | 40.0% | |
| AGTGCAGTAAGGTGTATCAA+TGG | + | chr3_1:80499987-80500006 | Msa0379380:intron | 40.0% | |
| TAAGGTGTATCAATGGTCAG+TGG | + | chr3_1:80499994-80500013 | Msa0379380:intron | 40.0% | |
| !! | CATTGATACCAAGCTCTAGA+AGG | - | chr3_1:80500148-80500167 | None:intergenic | 40.0% |
| GGATATTCAGTACAGTGAAG+AGG | - | chr3_1:80500286-80500305 | None:intergenic | 40.0% | |
| !!! | CATAGTTTTGGGGTGTATAG+AGG | - | chr3_1:80500404-80500423 | None:intergenic | 40.0% |
| CTGATATCTTTGACCATCGA+AGG | - | chr3_1:80500565-80500584 | None:intergenic | 40.0% | |
| TTCCCAAGAGTTGAAGCAAA+TGG | + | chr3_1:80500734-80500753 | Msa0379380:CDS | 40.0% | |
| GTTAAAGCCTTACATTCTGC+TGG | + | chr3_1:80500756-80500775 | Msa0379380:CDS | 40.0% | |
| ! | TCAATGTCACAACTTTGGAG+TGG | + | chr3_1:80500803-80500822 | Msa0379380:intron | 40.0% |
| CCACGAAATGAAGTAGTGTA+AGG | - | chr3_1:80500974-80500993 | None:intergenic | 40.0% | |
| CCTTACACTACTTCATTTCG+TGG | + | chr3_1:80500971-80500990 | Msa0379380:CDS | 40.0% | |
| TGCTGCATGAGATTGAATGT+TGG | + | chr3_1:80501199-80501218 | Msa0379380:intron | 40.0% | |
| GCTGCATGAGATTGAATGTT+GGG | + | chr3_1:80501200-80501219 | Msa0379380:intron | 40.0% | |
| TATTACATGCTGGACGACAA+AGG | + | chr3_1:80501386-80501405 | Msa0379380:CDS | 40.0% | |
| GCTGTGGGAATAGAATCTTA+AGG | - | chr3_1:80501459-80501478 | None:intergenic | 40.0% | |
| AAATTAGCAGCTCCATCATG+TGG | + | chr3_1:80501744-80501763 | Msa0379380:intron | 40.0% | |
| ATAAGCACAGTTCCACATGA+TGG | - | chr3_1:80501759-80501778 | None:intergenic | 40.0% | |
| TTGTAACCATCCTGTGGTTA+TGG | + | chr3_1:80501917-80501936 | Msa0379380:CDS | 40.0% | |
| TTAGATCCATAACCACAGGA+TGG | - | chr3_1:80501926-80501945 | None:intergenic | 40.0% | |
| TTCTTGACAGCCTAAGACAT+TGG | + | chr3_1:80501946-80501965 | Msa0379380:CDS | 40.0% | |
| GTAGTCCATACCAATGTCTT+AGG | - | chr3_1:80501959-80501978 | None:intergenic | 40.0% | |
| AGAGCTAAGATACCACTTTC+GGG | + | chr3_1:80502609-80502628 | Msa0379380:intron | 40.0% | |
| ATATCAAGCATTCCCGAAAG+TGG | - | chr3_1:80502624-80502643 | None:intergenic | 40.0% | |
| CGTGTTTCCAGTGTTTGTAT+TGG | + | chr3_1:80502770-80502789 | Msa0379380:intron | 40.0% | |
| TTCAGTTTGACACAGTGCAT+AGG | - | chr3_1:80502862-80502881 | None:intergenic | 40.0% | |
| AAGTGTTCCTAGAGCTATAG+GGG | + | chr3_1:80502954-80502973 | Msa0379380:intron | 40.0% | |
| GTTTGACTCAACTCAACCAA+TGG | - | chr3_1:80502982-80503001 | None:intergenic | 40.0% | |
| TGCCCTAACTAAAGGAATCA+AGG | - | chr3_1:80503069-80503088 | None:intergenic | 40.0% | |
| GTGCAAAACACAAAACTGGT+TGG | + | chr3_1:80503204-80503223 | Msa0379380:intron | 40.0% | |
| TTCTAGCAGTGAGAGAATAC+TGG | - | chr3_1:80503309-80503328 | None:intergenic | 40.0% | |
| TGTGGAGGTCTATATCTTGT+TGG | + | chr3_1:80503443-80503462 | Msa0379380:CDS | 40.0% | |
| ! | GAAGTTTTCCGAATTGGGAT+CGG | + | chr3_1:80503465-80503484 | Msa0379380:CDS | 40.0% |
| !! | TGCTCTAAAGCTCCTACATA+AGG | + | chr3_1:80503542-80503561 | Msa0379380:intron | 40.0% |
| ! | TCTAAAGCTCCTACATAAGG+AGG | + | chr3_1:80503545-80503564 | Msa0379380:intron | 40.0% |
| CTAAAGCTCCTACATAAGGA+GGG | + | chr3_1:80503546-80503565 | Msa0379380:intron | 40.0% | |
| CGTACAATACACCAATTGGT+GGG | - | chr3_1:80503585-80503604 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | - | chr3_1:80503617-80503636 | None:intergenic | 40.0% | |
| GATGTTACACTTACGAGTCA+TGG | + | chr3_1:80503781-80503800 | Msa0379380:intron | 40.0% | |
| AGATCAACGCGAGAATTACT+TGG | + | chr3_1:80503977-80503996 | Msa0379380:intron | 40.0% | |
| GCTGTGCCAAAAGTTAATGT+CGG | + | chr3_1:80504040-80504059 | Msa0379380:intron | 40.0% | |
| ! | TCCAATCAATATGGGCTATG+GGG | + | chr3_1:80504401-80504420 | Msa0379380:intron | 40.0% |
| TCTCCTTTAACACATGTCCT+AGG | + | chr3_1:80504505-80504524 | Msa0379380:intron | 40.0% | |
| CTCCTTTAACACATGTCCTA+GGG | + | chr3_1:80504506-80504525 | Msa0379380:intron | 40.0% | |
| TAGGGTGATTCTGGTATGAA+GGG | + | chr3_1:80504524-80504543 | Msa0379380:intron | 40.0% | |
| ! | ATTTAGCGGATGTTTGGGAA+TGG | + | chr3_1:80504670-80504689 | Msa0379380:intron | 40.0% |
| !! | CAGCTCTGAAGTTGAATTAG+CGG | + | chr3_1:80504716-80504735 | Msa0379380:intron | 40.0% |
| !! | AGCTCTGAAGTTGAATTAGC+GGG | + | chr3_1:80504717-80504736 | Msa0379380:intron | 40.0% |
| ATATTTAGCAGCTGGAGTGA+CGG | - | chr3_1:80505007-80505026 | None:intergenic | 40.0% | |
| CTCCAGCTGCTAAATATTTG+TGG | + | chr3_1:80505010-80505029 | Msa0379380:intron | 40.0% | |
| AACAAGCGTAGACCATATCA+TGG | + | chr3_1:80505296-80505315 | Msa0379380:CDS | 40.0% | |
| TTGTAGCACAACGAAGCTAA+TGG | + | chr3_1:80505453-80505472 | Msa0379380:intron | 40.0% | |
| TGTAGCACAACGAAGCTAAT+GGG | + | chr3_1:80505454-80505473 | Msa0379380:intron | 40.0% | |
| GCGCGCAATGCGATATTTAT+GGG | - | chr3_1:80496282-80496301 | None:intergenic | 45.0% | |
| AGCGCGCAATGCGATATTTA+TGG | - | chr3_1:80496283-80496302 | None:intergenic | 45.0% | |
| ! | GGTGTTGAAGCATCTTGTGT+TGG | - | chr3_1:80496385-80496404 | None:intergenic | 45.0% |
| GTTCTTGAAGGGCAGAGTAA+TGG | - | chr3_1:80496407-80496426 | None:intergenic | 45.0% | |
| GATTGAGTGGCTGTTCTTGA+AGG | - | chr3_1:80496419-80496438 | None:intergenic | 45.0% | |
| ! | TGCGAAGAGTGTAGATTGAG+TGG | - | chr3_1:80496432-80496451 | None:intergenic | 45.0% |
| ATTCAGTCGCCGGAAATTTC+GGG | + | chr3_1:80496489-80496508 | Msa0379380:CDS | 45.0% | |
| GGCATAGGTTAGACAAGAGA+AGG | + | chr3_1:80496753-80496772 | Msa0379380:intron | 45.0% | |
| TTATGGTCGTGCTCAAGAAG+AGG | + | chr3_1:80496824-80496843 | Msa0379380:CDS | 45.0% | |
| TGCTCAAGAAGAGGTCCTTA+AGG | + | chr3_1:80496833-80496852 | Msa0379380:CDS | 45.0% | |
| CATTGCAACAGACTCACAAC+AGG | - | chr3_1:80497408-80497427 | None:intergenic | 45.0% | |
| TCTGTTCTCCATCACTTCGA+TGG | - | chr3_1:80497459-80497478 | None:intergenic | 45.0% | |
| TGATGGAGAACAGACCATCA+TGG | + | chr3_1:80497465-80497484 | Msa0379380:CDS | 45.0% | |
| GATGGAGAACAGACCATCAT+GGG | + | chr3_1:80497466-80497485 | Msa0379380:CDS | 45.0% | |
| ATACACCCAACGGAAAAGCT+TGG | - | chr3_1:80497505-80497524 | None:intergenic | 45.0% | |
| ! | TCGACTTGTGATACACCCAA+CGG | - | chr3_1:80497515-80497534 | None:intergenic | 45.0% |
| GGTGTATCACAAGTCGACAA+TGG | + | chr3_1:80497518-80497537 | Msa0379380:CDS | 45.0% | |
| !!! | GCGAGCGCTTTTGAAATTGT+GGG | - | chr3_1:80497789-80497808 | None:intergenic | 45.0% |
| !!! | AGCGAGCGCTTTTGAAATTG+TGG | - | chr3_1:80497790-80497809 | None:intergenic | 45.0% |
| ! | CATTAAGAGGAGCACAGACA+AGG | - | chr3_1:80497853-80497872 | None:intergenic | 45.0% |
| ! | TTTTAGATGGTGATCTGGGC+TGG | + | chr3_1:80498016-80498035 | Msa0379380:intron | 45.0% |
| TTTAGATGGTGATCTGGGCT+GGG | + | chr3_1:80498017-80498036 | Msa0379380:intron | 45.0% | |
| ! | CTGGGCTTCCTTTTGCATTA+TGG | + | chr3_1:80498035-80498054 | Msa0379380:intron | 45.0% |
| TCTTCGGCTTAAGGATGCTA+AGG | + | chr3_1:80498148-80498167 | Msa0379380:intron | 45.0% | |
| ! | CGGCCCTCATACAATTTTGA+AGG | + | chr3_1:80498328-80498347 | Msa0379380:intron | 45.0% |
| ! | GGATGGTGGTATGATAGAAC+TGG | + | chr3_1:80498707-80498726 | Msa0379380:CDS | 45.0% |
| CCATGGAAAGGCTACATATC+AGG | - | chr3_1:80498810-80498829 | None:intergenic | 45.0% | |
| CCTGATATGTAGCCTTTCCA+TGG | + | chr3_1:80498807-80498826 | Msa0379380:intron | 45.0% | |
| TCATTGTGCAGGATCTTCCT+AGG | + | chr3_1:80499352-80499371 | Msa0379380:intron | 45.0% | |
| CCTAGGAGCAATGTTCTGTA+CGG | + | chr3_1:80499369-80499388 | Msa0379380:CDS | 45.0% | |
| CTGTACGGATACCAGATTGA+TGG | + | chr3_1:80499384-80499403 | Msa0379380:CDS | 45.0% | |
| AGTCTTGAGGTCCATCAATC+TGG | - | chr3_1:80499398-80499417 | None:intergenic | 45.0% | |
| ! | AGATTGATGGACCTCAAGAC+TGG | + | chr3_1:80499397-80499416 | Msa0379380:CDS | 45.0% |
| ! | GATTGATGGACCTCAAGACT+GGG | + | chr3_1:80499398-80499417 | Msa0379380:CDS | 45.0% |
| ! | ATTGATGGACCTCAAGACTG+GGG | + | chr3_1:80499399-80499418 | Msa0379380:CDS | 45.0% |
| CGCAAAAGCAGACAAAGCAA+AGG | - | chr3_1:80499722-80499741 | None:intergenic | 45.0% | |
| GGTAACATCCGTGCTATCAT+TGG | + | chr3_1:80499957-80499976 | Msa0379380:intron | 45.0% | |
| TTGGGTATCACAGTGCAGTA+AGG | + | chr3_1:80499976-80499995 | Msa0379380:intron | 45.0% | |
| ! | TGCATGCCACCTCCAATTTT+AGG | + | chr3_1:80500018-80500037 | Msa0379380:intron | 45.0% |
| ! | TAGAAGGTGTGGGATCTTAG+AGG | - | chr3_1:80500132-80500151 | None:intergenic | 45.0% |
| !! | TACCAAGCTCTAGAAGGTGT+GGG | - | chr3_1:80500142-80500161 | None:intergenic | 45.0% |
| !! | ATACCAAGCTCTAGAAGGTG+TGG | - | chr3_1:80500143-80500162 | None:intergenic | 45.0% |
| AGAGCTTGGTATCAATGCAG+TGG | + | chr3_1:80500151-80500170 | Msa0379380:CDS | 45.0% | |
| TCCAAATCCCAGAGATCACA+TGG | + | chr3_1:80500220-80500239 | Msa0379380:CDS | 45.0% | |
| !! | ACCATGTGATCTCTGGGATT+TGG | - | chr3_1:80500224-80500243 | None:intergenic | 45.0% |
| TGCTCCCAAAACCGTAGTAA+TGG | - | chr3_1:80500343-80500362 | None:intergenic | 45.0% | |
| !! | AACTCTTGGGAAGCATTAGC+TGG | - | chr3_1:80500726-80500745 | None:intergenic | 45.0% |
| CTCTATGCCAGCAGAATGTA+AGG | - | chr3_1:80500766-80500785 | None:intergenic | 45.0% | |
| CTTACATTCTGCTGGCATAG+AGG | + | chr3_1:80500764-80500783 | Msa0379380:CDS | 45.0% | |
| ! | ACTCTACTGCACCTTGTTTG+TGG | + | chr3_1:80501128-80501147 | Msa0379380:intron | 45.0% |
| GGACAATTGCTGAACTTCTC+CGG | + | chr3_1:80501407-80501426 | Msa0379380:CDS | 45.0% | |
| !! | TGGTTTGGTCTCATAGCTCT+GGG | - | chr3_1:80501609-80501628 | None:intergenic | 45.0% |
| !! | TTGGTTTGGTCTCATAGCTC+TGG | - | chr3_1:80501610-80501629 | None:intergenic | 45.0% |
| GACAGCCTAAGACATTGGTA+TGG | + | chr3_1:80501951-80501970 | Msa0379380:intron | 45.0% | |
| !! | AAGGCTGGTTAGTTTCCATG+AGG | + | chr3_1:80502222-80502241 | Msa0379380:intron | 45.0% |
| !! | AGGCTGGTTAGTTTCCATGA+GGG | + | chr3_1:80502223-80502242 | Msa0379380:intron | 45.0% |
| CAAACATTACCTGACCCTCA+TGG | - | chr3_1:80502240-80502259 | None:intergenic | 45.0% | |
| TAGGGTCACTGAGTATCATG+TGG | + | chr3_1:80502415-80502434 | Msa0379380:intron | 45.0% | |
| GTCACTGAGTATCATGTGGA+CGG | + | chr3_1:80502419-80502438 | Msa0379380:CDS | 45.0% | |
| ATACTGTGTCGAGGAACTGA+TGG | + | chr3_1:80502464-80502483 | Msa0379380:CDS | 45.0% | |
| TTTATTACCCTGATGAGGGG+AGG | - | chr3_1:80502506-80502525 | None:intergenic | 45.0% | |
| ! | GAAGTTATGAGGACTGACTC+AGG | - | chr3_1:80503121-80503140 | None:intergenic | 45.0% |
| TGCAGATCTGCCTGTTATTG+CGG | + | chr3_1:80503179-80503198 | Msa0379380:intron | 45.0% | |
| ! | TTTTGCACGACCGCAATAAC+AGG | - | chr3_1:80503192-80503211 | None:intergenic | 45.0% |
| GGTCGTGCAAAACACAAAAC+TGG | + | chr3_1:80503200-80503219 | Msa0379380:intron | 45.0% | |
| !! | ATGTAGGAGCTTTAGAGCAC+CGG | - | chr3_1:80503541-80503560 | None:intergenic | 45.0% |
| GCGTACAATACACCAATTGG+TGG | - | chr3_1:80503586-80503605 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAT+TGG | - | chr3_1:80503589-80503608 | None:intergenic | 45.0% | |
| GTTGTTGTCACGTGACTGAA+AGG | - | chr3_1:80503662-80503681 | None:intergenic | 45.0% | |
| ACAACTTTACCGTTGTGCCA+AGG | + | chr3_1:80503677-80503696 | Msa0379380:intron | 45.0% | |
| TTATTAATGAGGGGGAGCCT+TGG | - | chr3_1:80503697-80503716 | None:intergenic | 45.0% | |
| CGGCATGCTGTCATGATATT+GGG | + | chr3_1:80503862-80503881 | Msa0379380:intron | 45.0% | |
| !! | TTTGATGTAGGTGGGCTGAA+TGG | + | chr3_1:80504206-80504225 | Msa0379380:intron | 45.0% |
| TCCCCATAGCCCATATTGAT+TGG | - | chr3_1:80504405-80504424 | None:intergenic | 45.0% | |
| CACCCTAGGACATGTGTTAA+AGG | - | chr3_1:80504511-80504530 | None:intergenic | 45.0% | |
| CTTCATACCAGAATCACCCT+AGG | - | chr3_1:80504525-80504544 | None:intergenic | 45.0% | |
| CTAGGGTGATTCTGGTATGA+AGG | + | chr3_1:80504523-80504542 | Msa0379380:intron | 45.0% | |
| AGGGTGATTCTGGTATGAAG+GGG | + | chr3_1:80504525-80504544 | Msa0379380:intron | 45.0% | |
| AGCTTTGCAACTCGTGTTTC+TGG | + | chr3_1:80504548-80504567 | Msa0379380:CDS | 45.0% | |
| !! | GCTCTGAAGTTGAATTAGCG+GGG | + | chr3_1:80504718-80504737 | Msa0379380:intron | 45.0% |
| CATTGTTTACCAAGGGAGGA+GGG | - | chr3_1:80504904-80504923 | None:intergenic | 45.0% | |
| ACATTGTTTACCAAGGGAGG+AGG | - | chr3_1:80504905-80504924 | None:intergenic | 45.0% | |
| CCAACATTGTTTACCAAGGG+AGG | - | chr3_1:80504908-80504927 | None:intergenic | 45.0% | |
| CCTCCCTTGGTAAACAATGT+TGG | + | chr3_1:80504905-80504924 | Msa0379380:intron | 45.0% | |
| !! | TAGCTTATGGCTCTGACTGT+AGG | + | chr3_1:80505092-80505111 | Msa0379380:intron | 45.0% |
| GTAGCACAACGAAGCTAATG+GGG | + | chr3_1:80505455-80505474 | Msa0379380:intron | 45.0% | |
| AATGGGGAAGGTGGAAATGA+TGG | + | chr3_1:80505471-80505490 | Msa0379380:CDS | 45.0% | |
| !!! | TTTTTATATATTTCTTTATT+AGG | - | chr3_1:80500459-80500478 | None:intergenic | 5.0% |
| ! | CTCTTCGCATCCGTTTTCTC+CGG | + | chr3_1:80496443-80496462 | Msa0379380:CDS | 50.0% |
| !! | TGTCGCATTAAGCGCTGACA+TGG | - | chr3_1:80497140-80497159 | None:intergenic | 50.0% |
| GGAAGAAGCCATCGAAGTGA+TGG | + | chr3_1:80497448-80497467 | Msa0379380:intron | 50.0% | |
| CCGTACAGAACATTGCTCCT+AGG | - | chr3_1:80499372-80499391 | None:intergenic | 50.0% | |
| ! | TTGACAGCCTGCCTTTTGAC+TGG | + | chr3_1:80499544-80499563 | Msa0379380:CDS | 50.0% |
| !! | TGACAGCCTGCCTTTTGACT+GGG | + | chr3_1:80499545-80499564 | Msa0379380:CDS | 50.0% |
| TTTCTCCCCAGTCAAAAGGC+AGG | - | chr3_1:80499554-80499573 | None:intergenic | 50.0% | |
| !! | ATCCCACACCTTCTAGAGCT+TGG | + | chr3_1:80500137-80500156 | Msa0379380:CDS | 50.0% |
| GCACTAGCATAGCGACTCAT+AGG | - | chr3_1:80500693-80500712 | None:intergenic | 50.0% | |
| ATGAGTCGCTATGCTAGTGC+TGG | + | chr3_1:80500693-80500712 | Msa0379380:CDS | 50.0% | |
| GCACTCAGCATCGTAGTTCT+GGG | - | chr3_1:80501645-80501664 | None:intergenic | 50.0% | |
| !! | GGTTAGTTTCCATGAGGGTC+AGG | + | chr3_1:80502228-80502247 | Msa0379380:intron | 50.0% |
| CTCGCAAGTATACTGTGTCG+AGG | + | chr3_1:80502455-80502474 | Msa0379380:CDS | 50.0% | |
| AATGGCACCCCTATAGCTCT+AGG | - | chr3_1:80502964-80502983 | None:intergenic | 50.0% | |
| !! | TAGAGCTATAGGGGTGCCAT+TGG | + | chr3_1:80502963-80502982 | Msa0379380:intron | 50.0% |
| ! | GAGGACTGACTCAGGTTCAT+TGG | - | chr3_1:80503113-80503132 | None:intergenic | 50.0% |
| GGCAGATCTGCAGAAAGTTC+TGG | - | chr3_1:80503171-80503190 | None:intergenic | 50.0% | |
| TATAGACCTCCACAGTCCCA+AGG | - | chr3_1:80503437-80503456 | None:intergenic | 50.0% | |
| !! | TGTAGGAGCTTTAGAGCACC+GGG | - | chr3_1:80503540-80503559 | None:intergenic | 50.0% |
| ! | AAGGTCACGGGTTCAAGTTC+TGG | - | chr3_1:80503643-80503662 | None:intergenic | 50.0% |
| TCACGTGACTGAAAGGTCAC+GGG | - | chr3_1:80503655-80503674 | None:intergenic | 50.0% | |
| GTCACGTGACTGAAAGGTCA+CGG | - | chr3_1:80503656-80503675 | None:intergenic | 50.0% | |
| GCGGCATGCTGTCATGATAT+TGG | + | chr3_1:80503861-80503880 | Msa0379380:intron | 50.0% | |
| !! | TGTAGGTGGGCTGAATGGAA+TGG | + | chr3_1:80504211-80504230 | Msa0379380:intron | 50.0% |
| !! | GTAGGTGGGCTGAATGGAAT+GGG | + | chr3_1:80504212-80504231 | Msa0379380:intron | 50.0% |
| CACATGTCCTAGGGTGATTC+TGG | + | chr3_1:80504515-80504534 | Msa0379380:intron | 50.0% | |
| ATAATGCATCCCTCCTCCCT+TGG | + | chr3_1:80504892-80504911 | Msa0379380:intron | 50.0% | |
| CACAACGAAGCTAATGGGGA+AGG | + | chr3_1:80505459-80505478 | Msa0379380:CDS | 50.0% | |
| AACGAAGCTAATGGGGAAGG+TGG | + | chr3_1:80505462-80505481 | Msa0379380:CDS | 50.0% | |
| ATTGCGACCAGGAACGATGC+CGG | - | chr3_1:80496471-80496490 | None:intergenic | 55.0% | |
| CCTGGAGAAGTCTCCCATGA+TGG | - | chr3_1:80497482-80497501 | None:intergenic | 55.0% | |
| CCATCATGGGAGACTTCTCC+AGG | + | chr3_1:80497479-80497498 | Msa0379380:CDS | 55.0% | |
| ! | TCCAGGCCAAGCTTTTCCGT+TGG | + | chr3_1:80497496-80497515 | Msa0379380:CDS | 55.0% |
| ! | CCAGGCCAAGCTTTTCCGTT+GGG | + | chr3_1:80497497-80497516 | Msa0379380:CDS | 55.0% |
| !! | TAGGGGAAGCATTGACACGC+TGG | + | chr3_1:80498686-80498705 | Msa0379380:intron | 55.0% |
| !! | GGAAGCATTGACACGCTGGA+TGG | + | chr3_1:80498690-80498709 | Msa0379380:CDS | 55.0% |
| !! | AGCATTGACACGCTGGATGG+TGG | + | chr3_1:80498693-80498712 | Msa0379380:CDS | 55.0% |
| TGGACCTCAAGACTGGGGTA+AGG | + | chr3_1:80499404-80499423 | Msa0379380:CDS | 55.0% | |
| GGACCTCAAGACTGGGGTAA+GGG | + | chr3_1:80499405-80499424 | Msa0379380:CDS | 55.0% | |
| GACCTCAAGACTGGGGTAAG+GGG | + | chr3_1:80499406-80499425 | Msa0379380:CDS | 55.0% | |
| !! | GACAGCCTGCCTTTTGACTG+GGG | + | chr3_1:80499546-80499565 | Msa0379380:CDS | 55.0% |
| ! | AGTCGCTATGCTAGTGCTGG+TGG | + | chr3_1:80500696-80500715 | Msa0379380:CDS | 55.0% |
| TTGCTGAACTTCTCCGGCTG+TGG | + | chr3_1:80501413-80501432 | Msa0379380:CDS | 55.0% | |
| !! | TCATAGCTCTGGGAGCTGAG+GGG | - | chr3_1:80501599-80501618 | None:intergenic | 55.0% |
| !! | CTCATAGCTCTGGGAGCTGA+GGG | - | chr3_1:80501600-80501619 | None:intergenic | 55.0% |
| !! | TCTCATAGCTCTGGGAGCTG+AGG | - | chr3_1:80501601-80501620 | None:intergenic | 55.0% |
| GGCACTCAGCATCGTAGTTC+TGG | - | chr3_1:80501646-80501665 | None:intergenic | 55.0% | |
| !! | ATGAGGGGAGGAGCATTGAG+GGG | - | chr3_1:80502494-80502513 | None:intergenic | 55.0% |
| !! | GATGAGGGGAGGAGCATTGA+GGG | - | chr3_1:80502495-80502514 | None:intergenic | 55.0% |
| !! | TGATGAGGGGAGGAGCATTG+AGG | - | chr3_1:80502496-80502515 | None:intergenic | 55.0% |
| TCAATGCTCCTCCCCTCATC+AGG | + | chr3_1:80502495-80502514 | Msa0379380:CDS | 55.0% | |
| CAATGCTCCTCCCCTCATCA+GGG | + | chr3_1:80502496-80502515 | Msa0379380:CDS | 55.0% | |
| ATTGCAGAGCCTTGGGACTG+TGG | + | chr3_1:80503425-80503444 | Msa0379380:CDS | 55.0% | |
| GCTCCTACATAAGGAGGGTC+CGG | + | chr3_1:80503551-80503570 | Msa0379380:intron | 55.0% | |
| CTCCTACATAAGGAGGGTCC+GGG | + | chr3_1:80503552-80503571 | Msa0379380:intron | 55.0% | |
| TTCCCGGACCCTCCTTATGT+AGG | - | chr3_1:80503557-80503576 | None:intergenic | 55.0% | |
| TACATAAGGAGGGTCCGGGA+AGG | + | chr3_1:80503556-80503575 | Msa0379380:intron | 55.0% | |
| ACATAAGGAGGGTCCGGGAA+GGG | + | chr3_1:80503557-80503576 | Msa0379380:intron | 55.0% | |
| CCTGGTCGCAATTCAGTCGC+CGG | + | chr3_1:80496479-80496498 | Msa0379380:CDS | 60.0% | |
| CCCAACGGAAAAGCTTGGCC+TGG | - | chr3_1:80497500-80497519 | None:intergenic | 60.0% | |
| TGCCCCTTACCCCAGTCTTG+AGG | - | chr3_1:80499411-80499430 | None:intergenic | 60.0% | |
| !! | CGCTATGCTAGTGCTGGTGG+AGG | + | chr3_1:80500699-80500718 | Msa0379380:CDS | 60.0% |
| !! | TGAGGGGAGGAGCATTGAGG+GGG | - | chr3_1:80502493-80502512 | None:intergenic | 60.0% |
| CATAAGGAGGGTCCGGGAAG+GGG | + | chr3_1:80503558-80503577 | Msa0379380:intron | 60.0% | |
| CAATTGGTGGGACCCCTTCC+CGG | - | chr3_1:80503573-80503592 | None:intergenic | 60.0% | |
| ! | GCATCCGTTTTCTCCGGCGC+CGG | + | chr3_1:80496449-80496468 | Msa0379380:CDS | 65.0% |
| ! | GATGCCGGCGCCGGAGAAAA+CGG | - | chr3_1:80496456-80496475 | None:intergenic | 65.0% |
| CCGGCGACTGAATTGCGACC+AGG | - | chr3_1:80496482-80496501 | None:intergenic | 65.0% | |
| !! | GAGGGGAGGAGCATTGAGGG+GGG | - | chr3_1:80502492-80502511 | None:intergenic | 65.0% |
| GCAGAGCCTTGGGACTGTGG+AGG | + | chr3_1:80503428-80503447 | Msa0379380:CDS | 65.0% | |
| CGGGAAGGGGTCCCACCAAT+TGG | + | chr3_1:80503571-80503590 | Msa0379380:intron | 65.0% | |
| GAGGGGGAGCCTTGGCACAA+CGG | - | chr3_1:80503689-80503708 | None:intergenic | 65.0% | |
| ACCAGGAACGATGCCGGCGC+CGG | - | chr3_1:80496465-80496484 | None:intergenic | 70.0% | |
| !! | TCCGGCGCCGGCATCGTTCC+TGG | + | chr3_1:80496461-80496480 | Msa0379380:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 80496263 | 80505542 | 80496263 | ID=Msa0379380;Name=Msa0379380 |
| chr3_1 | mRNA | 80496263 | 80505542 | 80496263 | ID=Msa0379380-mRNA-1;Parent=Msa0379380;Name=Msa0379380-mRNA-1;_AED=0.08;_eAED=0.08;_QI=129|1|0.88|1|1|1|18|0|594 |
| chr3_1 | exon | 80496263 | 80496510 | 80496263 | ID=Msa0379380-mRNA-1:exon:20118;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80496627 | 80496675 | 80496627 | ID=Msa0379380-mRNA-1:exon:20119;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80496765 | 80496854 | 80496765 | ID=Msa0379380-mRNA-1:exon:20120;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80497449 | 80497606 | 80497449 | ID=Msa0379380-mRNA-1:exon:20121;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80498689 | 80498782 | 80498689 | ID=Msa0379380-mRNA-1:exon:20122;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80499363 | 80499599 | 80499363 | ID=Msa0379380-mRNA-1:exon:20123;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80499853 | 80499957 | 80499853 | ID=Msa0379380-mRNA-1:exon:20124;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80500137 | 80500241 | 80500137 | ID=Msa0379380-mRNA-1:exon:20125;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80500651 | 80500785 | 80500651 | ID=Msa0379380-mRNA-1:exon:20126;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80500920 | 80501006 | 80500920 | ID=Msa0379380-mRNA-1:exon:20127;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80501383 | 80501434 | 80501383 | ID=Msa0379380-mRNA-1:exon:20128;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80501904 | 80501967 | 80501904 | ID=Msa0379380-mRNA-1:exon:20129;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80502418 | 80502517 | 80502418 | ID=Msa0379380-mRNA-1:exon:20130;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80503386 | 80503486 | 80503386 | ID=Msa0379380-mRNA-1:exon:20131;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80504216 | 80504267 | 80504216 | ID=Msa0379380-mRNA-1:exon:20132;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80504527 | 80504589 | 80504527 | ID=Msa0379380-mRNA-1:exon:20133;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80505293 | 80505382 | 80505293 | ID=Msa0379380-mRNA-1:exon:20134;Parent=Msa0379380-mRNA-1 |
| chr3_1 | exon | 80505459 | 80505542 | 80505459 | ID=Msa0379380-mRNA-1:exon:20135;Parent=Msa0379380-mRNA-1 |
| chr3_1 | five_prime_UTR | 80496263 | 80496391 | 80496263 | ID=Msa0379380-mRNA-1:five_prime_utr;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80496392 | 80496510 | 80496392 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80496627 | 80496675 | 80496627 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80496765 | 80496854 | 80496765 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80497449 | 80497606 | 80497449 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80498689 | 80498782 | 80498689 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80499363 | 80499599 | 80499363 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80499853 | 80499957 | 80499853 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80500137 | 80500241 | 80500137 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80500651 | 80500785 | 80500651 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80500920 | 80501006 | 80500920 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80501383 | 80501434 | 80501383 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80501904 | 80501967 | 80501904 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80502418 | 80502517 | 80502418 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80503386 | 80503486 | 80503386 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80504216 | 80504267 | 80504216 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80504527 | 80504589 | 80504527 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80505293 | 80505382 | 80505293 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| chr3_1 | CDS | 80505459 | 80505542 | 80505459 | ID=Msa0379380-mRNA-1:cds;Parent=Msa0379380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
