Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197180 | XP_003594164.1 | 93.294 | 343 | 21 | 2 | 1 | 342 | 1 | 342 | 0.0 | 665 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197180 | sp|Q56X52|AOX4_ARATH | 74.917 | 303 | 63 | 4 | 41 | 336 | 55 | 351 | 9.83e-173 | 486 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197180 | Q2HTI6 | 93.294 | 343 | 21 | 2 | 1 | 342 | 1 | 342 | 0.0 | 665 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035980 | Msa0197180 | 0.830797 | 2.398318e-55 | -8.615850e-47 |
| Msa0036060 | Msa0197180 | 0.838826 | 2.283539e-57 | -8.615850e-47 |
| Msa0197180 | Msa0238940 | 0.974646 | 1.597391e-138 | -8.615850e-47 |
| Msa0197180 | Msa0308770 | 0.967793 | 9.062114e-128 | -8.615850e-47 |
| Msa0197180 | Msa0316750 | 0.969880 | 8.888501e-131 | -8.615850e-47 |
| Msa0197180 | Msa0376340 | 0.880637 | 4.660652e-70 | -8.615850e-47 |
| Msa0197180 | Msa0377010 | 0.800045 | 1.732518e-48 | -8.615850e-47 |
| Msa0197180 | Msa0379380 | 0.810570 | 1.079415e-50 | -8.615850e-47 |
| Msa0197180 | Msa0381410 | 0.835006 | 2.156448e-56 | -8.615850e-47 |
| Msa0197180 | Msa0424780 | 0.867794 | 1.052448e-65 | -8.615850e-47 |
| Msa0197180 | Msa0435000 | 0.817473 | 3.238553e-52 | -8.615850e-47 |
| Msa0197180 | Msa0475240 | 0.812562 | 3.982611e-51 | -8.615850e-47 |
| Msa0197180 | Msa0479090 | 0.808721 | 2.694105e-50 | -8.615850e-47 |
| Msa0197180 | Msa0504410 | 0.827283 | 1.704417e-54 | -8.615850e-47 |
| Msa0197180 | Msa0516160 | 0.882523 | 9.704073e-71 | -8.615850e-47 |
| Msa0197180 | Msa0579350 | 0.803600 | 3.226584e-49 | -8.615850e-47 |
| Msa0197180 | Msa0629440 | -0.838926 | 2.150501e-57 | -8.615850e-47 |
| Msa0197180 | Msa0644770 | -0.802983 | 4.330546e-49 | -8.615850e-47 |
| Msa0197180 | Msa0650730 | 0.800618 | 1.324183e-48 | -8.615850e-47 |
| Msa0197180 | Msa0667070 | -0.817266 | 3.604543e-52 | -8.615850e-47 |
| Msa0197180 | Msa0709670 | 0.813914 | 2.011296e-51 | -8.615850e-47 |
| Msa0197180 | Msa0713210 | 0.813042 | 3.126656e-51 | -8.615850e-47 |
| Msa0197180 | Msa0713220 | 0.814672 | 1.367792e-51 | -8.615850e-47 |
| Msa0197180 | Msa0713230 | 0.863424 | 2.514303e-64 | -8.615850e-47 |
| Msa0197180 | Msa0755080 | 0.908030 | 2.665899e-81 | -8.615850e-47 |
| Msa0197180 | Msa0755090 | 0.804587 | 2.011059e-49 | -8.615850e-47 |
| Msa0197180 | Msa0796950 | 0.868018 | 8.917526e-66 | -8.615850e-47 |
| Msa0197180 | Msa0797000 | 0.822971 | 1.779927e-53 | -8.615850e-47 |
| Msa0197180 | Msa0801360 | 0.809105 | 2.230756e-50 | -8.615850e-47 |
| Msa0197180 | Msa0834450 | 0.890208 | 1.212530e-73 | -8.615850e-47 |
| Msa0197180 | Msa0834460 | 0.816822 | 4.535285e-52 | -8.615850e-47 |
| Msa0197180 | Msa0839830 | 0.809959 | 1.461862e-50 | -8.615850e-47 |
| Msa0197180 | Msa0982590 | 0.808596 | 2.866299e-50 | -8.615850e-47 |
| Msa0197180 | Msa1012920 | 0.830563 | 2.737049e-55 | -8.615850e-47 |
| Msa0197180 | Msa1075590 | 0.800541 | 1.373253e-48 | -8.615850e-47 |
| Msa0197180 | Msa1129210 | 0.807186 | 5.717265e-50 | -8.615850e-47 |
| Msa0197180 | Msa1137090 | 0.805969 | 1.032531e-49 | -8.615850e-47 |
| Msa0197180 | Msa1162980 | 0.808512 | 2.987136e-50 | -8.615850e-47 |
| Msa0197180 | Msa1174870 | 0.845415 | 4.119946e-59 | -8.615850e-47 |
| Msa0197180 | Msa1234690 | 0.826336 | 2.868874e-54 | -8.615850e-47 |
| Msa0197180 | Msa1234730 | 0.837316 | 5.585610e-57 | -8.615850e-47 |
| Msa0197180 | Msa1301650 | 0.802274 | 6.064690e-49 | -8.615850e-47 |
| Msa0197180 | Msa1315110 | 0.836261 | 1.037852e-56 | -8.615850e-47 |
| Msa0197180 | Msa1395440 | 0.810274 | 1.250265e-50 | -8.615850e-47 |
| Msa0197180 | Msa1434240 | 0.805118 | 1.557979e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197180 | MtrunA17_Chr2g0289361 | 93.294 | 343 | 21 | 2 | 1 | 342 | 1 | 342 | 0.0 | 665 |
| Msa0197180 | MtrunA17_Chr4g0050421 | 26.667 | 180 | 111 | 3 | 109 | 287 | 159 | 318 | 4.08e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197180 | AT4G22260.1 | 74.917 | 303 | 63 | 4 | 41 | 336 | 55 | 351 | 9.99e-174 | 486 |
| Msa0197180 | AT5G64210.1 | 26.984 | 189 | 113 | 4 | 104 | 287 | 158 | 326 | 2.00e-13 | 70.9 |
Find 93 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCAGTAAATAGTTGAAATT+TGG | 0.175229 | 2_1:-14923720 | Msa0197180:three_prime_UTR |
| GGAGGTGACTTGTATTTATT+TGG | 0.198866 | 2_1:-14924563 | Msa0197180:intron |
| ATTGCAAGAGTCCCTTATTT+TGG | 0.214997 | 2_1:-14927639 | Msa0197180:intron |
| AATGCATCATTTGCTCATTA+TGG | 0.218823 | 2_1:-14925955 | Msa0197180:CDS |
| TCGACTAGTGCTTGGGAAAA+AGG | 0.235716 | 2_1:-14927859 | Msa0197180:CDS |
| ATCGTAGGCCTTCTAGTATT+TGG | 0.244860 | 2_1:+14924432 | None:intergenic |
| AAATAGAAGTTACCAAAATA+AGG | 0.254084 | 2_1:+14927627 | None:intergenic |
| TTTGTTGTAGTTTGGCATTT+AGG | 0.271545 | 2_1:+14928255 | None:intergenic |
| ATGAGGGCTTGCCAAACTTA+TGG | 0.280986 | 2_1:-14923980 | Msa0197180:CDS |
| TAATACTTACATGCCATTCT+TGG | 0.285610 | 2_1:+14925479 | None:intergenic |
| CTCCACATGTATGAGAGTTT+TGG | 0.303801 | 2_1:-14926032 | Msa0197180:CDS |
| AAAGAAACGTTAGTTGTGTT+TGG | 0.318743 | 2_1:+14928199 | None:intergenic |
| ATGTCTTACTTCACCTTAGC+TGG | 0.330534 | 2_1:+14923839 | None:intergenic |
| GGTCTATGGTTGCAGGAACT+TGG | 0.368546 | 2_1:-14925590 | Msa0197180:intron |
| TATTTATTTGTTTAAGTGAC+TGG | 0.373134 | 2_1:+14928168 | None:intergenic |
| ACCGGAGGTTCCCATAAGTT+TGG | 0.376142 | 2_1:+14923969 | None:intergenic |
| TGAGGGCTTGCCAAACTTAT+GGG | 0.400759 | 2_1:-14923979 | Msa0197180:CDS |
| GCCGTCGCCGCCATGATGTT+TGG | 0.401650 | 2_1:+14928108 | None:intergenic |
| TTTGGCATTTAGGACCATTC+CGG | 0.402483 | 2_1:+14928265 | None:intergenic |
| TTAGTTGTGTTTGGATTGTA+TGG | 0.402606 | 2_1:+14928208 | None:intergenic |
| AATACTTACATGCCATTCTT+GGG | 0.424208 | 2_1:+14925480 | None:intergenic |
| CAGATGAATTTCAAACCTCC+AGG | 0.431269 | 2_1:-14924458 | Msa0197180:CDS |
| TTTGTTTAAGTGACTGGAAA+GGG | 0.441274 | 2_1:+14928174 | None:intergenic |
| TATGGTATTTGTCGTTTGGC+GGG | 0.441298 | 2_1:+14928231 | None:intergenic |
| ATGGTATGGTATTTGTCGTT+TGG | 0.443914 | 2_1:+14928227 | None:intergenic |
| CCAGGGTTCCAAATACTAGA+AGG | 0.451414 | 2_1:-14924440 | Msa0197180:CDS |
| AATAGAAGTTACCAAAATAA+GGG | 0.455664 | 2_1:+14927628 | None:intergenic |
| GTATGGTATTTGTCGTTTGG+CGG | 0.459905 | 2_1:+14928230 | None:intergenic |
| GTTGCTGTGAATTATTATAC+AGG | 0.462624 | 2_1:-14924584 | Msa0197180:CDS |
| TACCGTGAGAAAGATATTAA+CGG | 0.462964 | 2_1:+14927816 | None:intergenic |
| GGAATGCTTGGTGGTTTGAC+CGG | 0.468487 | 2_1:-14925565 | Msa0197180:CDS |
| AACTTATGACAAATTTATCA+AGG | 0.473190 | 2_1:-14925125 | Msa0197180:CDS |
| TACTTCATCGACTAGTGCTT+GGG | 0.482403 | 2_1:-14927866 | Msa0197180:CDS |
| ATGATGTTTGGTGGTGGAAA+TGG | 0.485932 | 2_1:+14928120 | None:intergenic |
| ATACTTCATCGACTAGTGCT+TGG | 0.489002 | 2_1:-14927867 | Msa0197180:CDS |
| CAATATGTTGAGCAAGAAAC+CGG | 0.493032 | 2_1:+14925546 | None:intergenic |
| TTCCGGCGACTATTAGTACT+TGG | 0.493627 | 2_1:+14928282 | None:intergenic |
| CTATGGTTGCAGGAACTTGG+AGG | 0.498887 | 2_1:-14925587 | Msa0197180:intron |
| AGGAACTTGGAGGGAATGCT+TGG | 0.505846 | 2_1:-14925577 | Msa0197180:CDS |
| ATGATGGTCCGGCACGGTAG+TGG | 0.510689 | 2_1:+14928329 | None:intergenic |
| AACTTGGAGGGAATGCTTGG+TGG | 0.513318 | 2_1:-14925574 | Msa0197180:CDS |
| TGTGTTTGGATTGTATGGTA+TGG | 0.523907 | 2_1:+14928213 | None:intergenic |
| ATGCATTTCATTCCAGCTCT+CGG | 0.525237 | 2_1:+14925971 | None:intergenic |
| GCCAAACTTATGGGAACCTC+CGG | 0.533794 | 2_1:-14923970 | Msa0197180:CDS |
| GATTTGTTGAGGTGTGAGGT+TGG | 0.533926 | 2_1:+14928063 | None:intergenic |
| TAATAATTCACAGCAACCTC+AGG | 0.534240 | 2_1:+14924590 | None:intergenic |
| ATTCTGTGTGAATGATGGTC+CGG | 0.538380 | 2_1:+14928318 | None:intergenic |
| GTATTTAATAAGCCCAAGAA+TGG | 0.539687 | 2_1:-14925492 | Msa0197180:CDS |
| GACGTAGAGGAAGACGATAA+CGG | 0.540292 | 2_1:+14928007 | None:intergenic |
| CCTTCTAGTATTTGGAACCC+TGG | 0.541899 | 2_1:+14924440 | None:intergenic |
| ACAATTGAAGCAGGCTGTGA+AGG | 0.550083 | 2_1:-14923899 | Msa0197180:CDS |
| TTCACAGCAACCTCAGGAGC+CGG | 0.550908 | 2_1:+14924596 | None:intergenic |
| TCAGTCTGTACAATTGAAGC+AGG | 0.558599 | 2_1:-14923908 | Msa0197180:CDS |
| CATGTGGAGAATTGACATAA+AGG | 0.561610 | 2_1:+14926046 | None:intergenic |
| ATCCGTTAATATCTTTCTCA+CGG | 0.562693 | 2_1:-14927818 | Msa0197180:intron |
| ATGTTTGGTGGTGGAAATGG+TGG | 0.563886 | 2_1:+14928123 | None:intergenic |
| ATTTCCACCACCAAACATCA+TGG | 0.564505 | 2_1:-14928118 | Msa0197180:exon |
| AGCATATTCTGTGTGAATGA+TGG | 0.566237 | 2_1:+14928313 | None:intergenic |
| ATTTGTTTAAGTGACTGGAA+AGG | 0.568786 | 2_1:+14928173 | None:intergenic |
| GCCGCCATGATGTTTGGTGG+TGG | 0.573811 | 2_1:+14928114 | None:intergenic |
| CTGCATATGAATGAGGCGAC+CGG | 0.574364 | 2_1:+14923951 | None:intergenic |
| CTGAACATTGTAAGACAATG+AGG | 0.580218 | 2_1:-14923997 | Msa0197180:CDS |
| ACCAAACATCATGGCGGCGA+CGG | 0.582086 | 2_1:-14928109 | Msa0197180:exon |
| TGTTACTTCTAATCCAGCTA+AGG | 0.582853 | 2_1:-14923852 | Msa0197180:CDS |
| TGATGATTTGTTGAGGTGTG+AGG | 0.589989 | 2_1:+14928059 | None:intergenic |
| GACAAATTTATCAAGGAACA+AGG | 0.592572 | 2_1:-14925118 | Msa0197180:CDS |
| AGATGAATTTCAAACCTCCA+GGG | 0.596112 | 2_1:-14924457 | Msa0197180:CDS |
| TCTGCATCTGCATATGAATG+AGG | 0.596959 | 2_1:+14923944 | None:intergenic |
| ATCGTGATAGAAATTATGCA+AGG | 0.599946 | 2_1:-14927680 | Msa0197180:CDS |
| AGTAACGGAATCTAAAGGAG+AGG | 0.604736 | 2_1:+14927912 | None:intergenic |
| CTCATACACCCTCATTGTAG+AGG | 0.605748 | 2_1:+14923689 | None:intergenic |
| AGTACTAATAGTCGCCGGAA+TGG | 0.608979 | 2_1:-14928279 | Msa0197180:five_prime_UTR |
| TATGGTTGCAGGAACTTGGA+GGG | 0.615759 | 2_1:-14925586 | Msa0197180:intron |
| TCTAGTATTTGGAACCCTGG+AGG | 0.616493 | 2_1:+14924443 | None:intergenic |
| GCTGTGAATTATTATACAGG+AGG | 0.620648 | 2_1:-14924581 | Msa0197180:CDS |
| ATTTCTATATCATACTGTAG+AGG | 0.622575 | 2_1:+14923753 | None:intergenic |
| GTCGCCGCCATGATGTTTGG+TGG | 0.627726 | 2_1:+14928111 | None:intergenic |
| AACCAAAACTCTCATACATG+TGG | 0.629436 | 2_1:+14926030 | None:intergenic |
| GATGAGATTCCTCTACAATG+AGG | 0.633764 | 2_1:-14923698 | Msa0197180:three_prime_UTR |
| CATATGAATGAGGCGACCGG+AGG | 0.633813 | 2_1:+14923954 | None:intergenic |
| ATGAGATTCCTCTACAATGA+GGG | 0.634949 | 2_1:-14923697 | Msa0197180:three_prime_UTR |
| AATACTAGAAGGCCTACGAT+AGG | 0.636700 | 2_1:-14924429 | Msa0197180:intron |
| TACCAAGTACTAATAGTCGC+CGG | 0.643897 | 2_1:-14928284 | Msa0197180:five_prime_UTR |
| ATGATGATGATGATTTGTTG+AGG | 0.646145 | 2_1:+14928052 | None:intergenic |
| TTTCAAGACATACCTATCGT+AGG | 0.654868 | 2_1:+14924417 | None:intergenic |
| AGCTAAGGTGAAGTAAGACA+TGG | 0.655418 | 2_1:-14923837 | Msa0197180:exon |
| TGAACATTGTAAGACAATGA+GGG | 0.657949 | 2_1:-14923996 | Msa0197180:CDS |
| GCACGAATTGAAAGACGTAG+AGG | 0.662575 | 2_1:+14927994 | None:intergenic |
| TCATTCATATGCAGATGCAG+AGG | 0.664876 | 2_1:-14923942 | Msa0197180:CDS |
| AAGAAAAGAAATAGAATACG+AGG | 0.667273 | 2_1:-14923782 | Msa0197180:three_prime_UTR |
| GTGTGAATGATGGTCCGGCA+CGG | 0.676050 | 2_1:+14928323 | None:intergenic |
| TCCACCACCAAACATCATGG+CGG | 0.747722 | 2_1:-14928115 | Msa0197180:exon |
| AAATTTATCAAGGAACAAGG+AGG | 0.753148 | 2_1:-14925115 | Msa0197180:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTATTTTTTTGAAAACT+CGG | + | chr2_1:14924679-14924698 | None:intergenic | 10.0% |
| !! | TTAACAGATTAATATTTGAA+AGG | + | chr2_1:14924363-14924382 | None:intergenic | 15.0% |
| !! | CTTAATAAAATAAACTACAT+GGG | + | chr2_1:14925476-14925495 | None:intergenic | 15.0% |
| !! | ACTTAATAAAATAAACTACA+TGG | + | chr2_1:14925477-14925496 | None:intergenic | 15.0% |
| !! | TTCTGATATAAAAAGAAAAA+AGG | + | chr2_1:14925666-14925685 | None:intergenic | 15.0% |
| !!! | TTTTTATATCAGAAAAGAAA+GGG | - | chr2_1:14925672-14925691 | Msa0197180:intron | 15.0% |
| !! | TAACTATTGTTATATATTTG+TGG | - | chr2_1:14925875-14925894 | Msa0197180:intron | 15.0% |
| !! | TTAATAATCATAATCAATGA+AGG | - | chr2_1:14927210-14927229 | Msa0197180:intron | 15.0% |
| !!! | TTTGAGTTTTATTCTTAAAT+TGG | + | chr2_1:14927654-14927673 | None:intergenic | 15.0% |
| !! | AAAAAGATAAACAATGTTTA+GGG | + | chr2_1:14927708-14927727 | None:intergenic | 15.0% |
| !! | AAAAAAGATAAACAATGTTT+AGG | + | chr2_1:14927709-14927728 | None:intergenic | 15.0% |
| !!! | TTGTTTATCTTTTTTGAATA+TGG | - | chr2_1:14927714-14927733 | Msa0197180:CDS | 15.0% |
| !! | TATTTATTTGTTTAAGTGAC+TGG | + | chr2_1:14923782-14923801 | None:intergenic | 20.0% |
| !!! | ATTAGTTGAATTTTCAGTAA+CGG | + | chr2_1:14924053-14924072 | None:intergenic | 20.0% |
| !!! | TTTCTTATTTGATATTCGAT+TGG | - | chr2_1:14924160-14924179 | Msa0197180:intron | 20.0% |
| !! | AATAGAAGTTACCAAAATAA+GGG | + | chr2_1:14924322-14924341 | None:intergenic | 20.0% |
| !! | AAATAGAAGTTACCAAAATA+AGG | + | chr2_1:14924323-14924342 | None:intergenic | 20.0% |
| !!! | AACAGCAAATAATTCATTTT+AGG | + | chr2_1:14924497-14924516 | None:intergenic | 20.0% |
| !!! | TTATAATTTTGATACCTTCA+AGG | + | chr2_1:14924738-14924757 | None:intergenic | 20.0% |
| !!! | CTTTTTATATCAGAAAAGAA+AGG | - | chr2_1:14925671-14925690 | Msa0197180:intron | 20.0% |
| !! | AACTTATGACAAATTTATCA+AGG | - | chr2_1:14926822-14926841 | Msa0197180:intron | 20.0% |
| !!! | ATGTTTTCATAATTAAGTGT+TGG | - | chr2_1:14926935-14926954 | Msa0197180:intron | 20.0% |
| !!! | ATTATGATTCAATGGTTTTA+TGG | + | chr2_1:14926961-14926980 | None:intergenic | 20.0% |
| !! | AATAAATGAAAGCAAATAGA+TGG | - | chr2_1:14927153-14927172 | Msa0197180:intron | 20.0% |
| !! | AAATCTAGGTAGAAATATAA+TGG | + | chr2_1:14927418-14927437 | None:intergenic | 20.0% |
| !!! | CATTTTTATTTTCATTGCAA+GGG | - | chr2_1:14927602-14927621 | Msa0197180:intron | 20.0% |
| !!! | ATTTTTATTTTCATTGCAAG+GGG | - | chr2_1:14927603-14927622 | Msa0197180:intron | 20.0% |
| !! | AACTCAAATGTTTAATTAAG+TGG | - | chr2_1:14927666-14927685 | Msa0197180:CDS | 20.0% |
| !! | AAAAGATAAACAATGTTTAG+GGG | + | chr2_1:14927707-14927726 | None:intergenic | 20.0% |
| !!! | TACTGCTTTAAAAAAATCAT+AGG | + | chr2_1:14927850-14927869 | None:intergenic | 20.0% |
| ! | ACTTAAAAGATATGCATTCA+TGG | + | chr2_1:14924767-14924786 | None:intergenic | 25.0% |
| !! | AACACAGTAAATCTTGATTT+TGG | + | chr2_1:14924923-14924942 | None:intergenic | 25.0% |
| ! | GGACAAAAACATTAACTTAA+CGG | - | chr2_1:14924980-14924999 | Msa0197180:intron | 25.0% |
| ! | TCCAATTACTTGTAAATGTA+GGG | - | chr2_1:14925811-14925830 | Msa0197180:intron | 25.0% |
| !!! | ATTTTTTTCCTTTAATGTGC+TGG | - | chr2_1:14926032-14926051 | Msa0197180:CDS | 25.0% |
| ! | CTCTTCAAAAACAAATCTTA+TGG | + | chr2_1:14926115-14926134 | None:intergenic | 25.0% |
| !!! | AAGATTTGTTTTTGAAGAGT+CGG | - | chr2_1:14926116-14926135 | Msa0197180:intron | 25.0% |
| ! | ATACTGTGAATATTAACACA+TGG | - | chr2_1:14926148-14926167 | Msa0197180:intron | 25.0% |
| ! | TACTGTGAATATTAACACAT+GGG | - | chr2_1:14926149-14926168 | Msa0197180:intron | 25.0% |
| ! | TGAAAAGAGACAAATATTGA+GGG | - | chr2_1:14926199-14926218 | Msa0197180:intron | 25.0% |
| ! | TTTATTGCATGCAATAAGTT+TGG | - | chr2_1:14926335-14926354 | Msa0197180:intron | 25.0% |
| ! | TTATTGCATGCAATAAGTTT+GGG | - | chr2_1:14926336-14926355 | Msa0197180:intron | 25.0% |
| ! | AAAAATTGAAAGATGTAGCA+GGG | + | chr2_1:14926521-14926540 | None:intergenic | 25.0% |
| ! | AAAAAATTGAAAGATGTAGC+AGG | + | chr2_1:14926522-14926541 | None:intergenic | 25.0% |
| !!! | TGCTACATCTTTCAATTTTT+TGG | - | chr2_1:14926521-14926540 | Msa0197180:intron | 25.0% |
| !! | TTTGAAACTTATCATATGCT+TGG | + | chr2_1:14926581-14926600 | None:intergenic | 25.0% |
| ! | AAAGAGACCAAATGAAAAAT+TGG | - | chr2_1:14926598-14926617 | Msa0197180:intron | 25.0% |
| !! | ATAAGTGCCAATTTTTCATT+TGG | + | chr2_1:14926608-14926627 | None:intergenic | 25.0% |
| ! | ATGAAAAATTGGCACTTATT+TGG | - | chr2_1:14926609-14926628 | Msa0197180:intron | 25.0% |
| ! | TTATTTAGCAAAAGCAAACT+AGG | + | chr2_1:14926664-14926683 | None:intergenic | 25.0% |
| ! | ATGTGTAATTCAGTAAAACA+TGG | + | chr2_1:14926696-14926715 | None:intergenic | 25.0% |
| ! | TGTACATGTTAACTGTTTAT+AGG | - | chr2_1:14926903-14926922 | Msa0197180:intron | 25.0% |
| ! | GCAAGATAATTATGATTCAA+TGG | + | chr2_1:14926969-14926988 | None:intergenic | 25.0% |
| ! | TACCAAATAAATCATGATTC+AGG | + | chr2_1:14926993-14927012 | None:intergenic | 25.0% |
| ! | ATTTACTAAATGATCAATGC+AGG | + | chr2_1:14927180-14927199 | None:intergenic | 25.0% |
| !! | GAAGGAAATCTAAACAATTT+TGG | + | chr2_1:14927238-14927257 | None:intergenic | 25.0% |
| ! | TACAAAAAAATTACCAAACC+AGG | + | chr2_1:14927313-14927332 | None:intergenic | 25.0% |
| !!! | GTTTGGTAATTTTTTTGTAG+AGG | - | chr2_1:14927314-14927333 | Msa0197180:intron | 25.0% |
| ! | TCATCTGAAGAAAATGATAT+TGG | + | chr2_1:14927476-14927495 | None:intergenic | 25.0% |
| ! | ATATAAATGAATGTTGAACC+AGG | + | chr2_1:14927556-14927575 | None:intergenic | 25.0% |
| ! | CCTTGCAATGAAAATAAAAA+TGG | + | chr2_1:14927604-14927623 | None:intergenic | 25.0% |
| !!! | CCATTTTTATTTTCATTGCA+AGG | - | chr2_1:14927601-14927620 | Msa0197180:intron | 25.0% |
| ! | AAAGATAAACAATGTTTAGG+GGG | + | chr2_1:14927706-14927725 | None:intergenic | 25.0% |
| ! | ATCGTACAGATTATCTAAAA+GGG | + | chr2_1:14927902-14927921 | None:intergenic | 25.0% |
| ! | AAGAAAAGAAATAGAATACG+AGG | - | chr2_1:14928165-14928184 | Msa0197180:five_prime_UTR | 25.0% |
| ! | ATTTCTATATCATACTGTAG+AGG | + | chr2_1:14928197-14928216 | None:intergenic | 25.0% |
| ! | GTCAGTAAATAGTTGAAATT+TGG | - | chr2_1:14928227-14928246 | Msa0197180:five_prime_UTR | 25.0% |
| ! | TTTGTTGTAGTTTGGCATTT+AGG | + | chr2_1:14923695-14923714 | None:intergenic | 30.0% |
| TTAGTTGTGTTTGGATTGTA+TGG | + | chr2_1:14923742-14923761 | None:intergenic | 30.0% | |
| AAAGAAACGTTAGTTGTGTT+TGG | + | chr2_1:14923751-14923770 | None:intergenic | 30.0% | |
| TTTGTTTAAGTGACTGGAAA+GGG | + | chr2_1:14923776-14923795 | None:intergenic | 30.0% | |
| ATTTGTTTAAGTGACTGGAA+AGG | + | chr2_1:14923777-14923796 | None:intergenic | 30.0% | |
| !! | ATGATGATGATGATTTGTTG+AGG | + | chr2_1:14923898-14923917 | None:intergenic | 30.0% |
| !! | TTTTCAGTAACGGAATCTAA+AGG | + | chr2_1:14924043-14924062 | None:intergenic | 30.0% |
| ATCCGTTAATATCTTTCTCA+CGG | - | chr2_1:14924129-14924148 | Msa0197180:intron | 30.0% | |
| TACCGTGAGAAAGATATTAA+CGG | + | chr2_1:14924134-14924153 | None:intergenic | 30.0% | |
| ! | CAGCTTCAATTGATATTTTC+AGG | - | chr2_1:14924214-14924233 | Msa0197180:intron | 30.0% |
| ATCGTGATAGAAATTATGCA+AGG | - | chr2_1:14924267-14924286 | Msa0197180:intron | 30.0% | |
| !!! | TTTTTTGAAAACTCGGTATC+TGG | + | chr2_1:14924672-14924691 | None:intergenic | 30.0% |
| !! | GCATATCTTTTAAGTGAGTT+TGG | - | chr2_1:14924772-14924791 | Msa0197180:intron | 30.0% |
| TAGTCTCTGAATGTATTGAA+CGG | + | chr2_1:14924872-14924891 | None:intergenic | 30.0% | |
| TGATACAACCTTACACATTT+AGG | - | chr2_1:14924895-14924914 | Msa0197180:intron | 30.0% | |
| GATACAACCTTACACATTTA+GGG | - | chr2_1:14924896-14924915 | Msa0197180:intron | 30.0% | |
| AAAACCTAAAATGCAACAGA+AGG | - | chr2_1:14924948-14924967 | Msa0197180:intron | 30.0% | |
| TGGGATATTACATACATCTA+TGG | + | chr2_1:14925021-14925040 | None:intergenic | 30.0% | |
| ATGTAATATCCCATTTCCAA+AGG | - | chr2_1:14925028-14925047 | Msa0197180:intron | 30.0% | |
| !!! | TGTTCATATTTTCTAGCTCA+GGG | + | chr2_1:14925126-14925145 | None:intergenic | 30.0% |
| !!! | TTGTTCATATTTTCTAGCTC+AGG | + | chr2_1:14925127-14925146 | None:intergenic | 30.0% |
| ATGTTTGCAATGAATTTGAC+AGG | - | chr2_1:14925159-14925178 | Msa0197180:CDS | 30.0% | |
| ATTTACAACAGAGTGAAGAA+TGG | + | chr2_1:14925273-14925292 | None:intergenic | 30.0% | |
| AATCGATAGACAAATTGACA+AGG | + | chr2_1:14925301-14925320 | None:intergenic | 30.0% | |
| ! | TGCTCCTTTTATGTGTTAAT+TGG | - | chr2_1:14925333-14925352 | Msa0197180:intron | 30.0% |
| TACGCCAATTAACACATAAA+AGG | + | chr2_1:14925340-14925359 | None:intergenic | 30.0% | |
| AAGTTCACAAATCACAGTAT+AGG | + | chr2_1:14925363-14925382 | None:intergenic | 30.0% | |
| ! | GCATCACAATCTAAAATTGA+TGG | + | chr2_1:14925388-14925407 | None:intergenic | 30.0% |
| CAAACCAAAATACACAAACA+TGG | + | chr2_1:14925410-14925429 | None:intergenic | 30.0% | |
| !!! | CATGTTTGTGTATTTTGGTT+TGG | - | chr2_1:14925408-14925427 | Msa0197180:intron | 30.0% |
| !!! | TATTTTGGTTTGGTCTAACA+TGG | - | chr2_1:14925418-14925437 | Msa0197180:intron | 30.0% |
| !! | AACTGGATTAGTCAATTCAT+AGG | + | chr2_1:14925571-14925590 | None:intergenic | 30.0% |
| ATTGACTAATCCAGTTTATG+AGG | - | chr2_1:14925575-14925594 | Msa0197180:CDS | 30.0% | |
| TTTAGAAGAAAACTAACAGC+TGG | + | chr2_1:14925707-14925726 | None:intergenic | 30.0% | |
| GTCCAATTACTTGTAAATGT+AGG | - | chr2_1:14925810-14925829 | Msa0197180:intron | 30.0% | |
| TCCCTACATTTACAAGTAAT+TGG | + | chr2_1:14925815-14925834 | None:intergenic | 30.0% | |
| AATGCATCATTTGCTCATTA+TGG | - | chr2_1:14925992-14926011 | Msa0197180:CDS | 30.0% | |
| CATTATGGAAGTAAGATCTT+TGG | - | chr2_1:14926007-14926026 | Msa0197180:CDS | 30.0% | |
| CTGAAAAGAGACAAATATTG+AGG | - | chr2_1:14926198-14926217 | Msa0197180:intron | 30.0% | |
| GAAAAGAGACAAATATTGAG+GGG | - | chr2_1:14926200-14926219 | Msa0197180:intron | 30.0% | |
| TACGTTCAGATTTGTAGTTT+AGG | - | chr2_1:14926237-14926256 | Msa0197180:intron | 30.0% | |
| TTAGGAAAATAATCACAGAG+TGG | - | chr2_1:14926255-14926274 | Msa0197180:intron | 30.0% | |
| GTATTTAATAAGCCCAAGAA+TGG | - | chr2_1:14926455-14926474 | Msa0197180:intron | 30.0% | |
| AATACTTACATGCCATTCTT+GGG | + | chr2_1:14926470-14926489 | None:intergenic | 30.0% | |
| TAATACTTACATGCCATTCT+TGG | + | chr2_1:14926471-14926490 | None:intergenic | 30.0% | |
| GACAAATTTATCAAGGAACA+AGG | - | chr2_1:14926829-14926848 | Msa0197180:intron | 30.0% | |
| AAATTTATCAAGGAACAAGG+AGG | - | chr2_1:14926832-14926851 | Msa0197180:intron | 30.0% | |
| ATGTTAACTGTTTATAGGCT+TGG | - | chr2_1:14926908-14926927 | Msa0197180:intron | 30.0% | |
| CTCCTGAATCATGATTTATT+TGG | - | chr2_1:14926988-14927007 | Msa0197180:intron | 30.0% | |
| ATTTGGTATGAAATCAGTTG+TGG | - | chr2_1:14927005-14927024 | Msa0197180:intron | 30.0% | |
| TTTGGTATGAAATCAGTTGT+GGG | - | chr2_1:14927006-14927025 | Msa0197180:intron | 30.0% | |
| ACAATAAACGATGAATGTGA+AGG | + | chr2_1:14927256-14927275 | None:intergenic | 30.0% | |
| ! | AGGTTAGTTACTTAATCACA+TGG | + | chr2_1:14927293-14927312 | None:intergenic | 30.0% |
| ATGTGATTAAGTAACTAACC+TGG | - | chr2_1:14927292-14927311 | Msa0197180:intron | 30.0% | |
| ATTAAGTAACTAACCTGGTT+TGG | - | chr2_1:14927297-14927316 | Msa0197180:intron | 30.0% | |
| GTTGCTGTGAATTATTATAC+AGG | - | chr2_1:14927363-14927382 | Msa0197180:intron | 30.0% | |
| ! | AAGCAAAGGGGTTTTTATTA+GGG | + | chr2_1:14927762-14927781 | None:intergenic | 30.0% |
| ACTAAAGTATACAAGCAAAG+GGG | + | chr2_1:14927774-14927793 | None:intergenic | 30.0% | |
| GACTAAAGTATACAAGCAAA+GGG | + | chr2_1:14927775-14927794 | None:intergenic | 30.0% | |
| TGACTAAAGTATACAAGCAA+AGG | + | chr2_1:14927776-14927795 | None:intergenic | 30.0% | |
| TATACTTTAGTCAGAATACC+AGG | - | chr2_1:14927783-14927802 | Msa0197180:intron | 30.0% | |
| CATCGTACAGATTATCTAAA+AGG | + | chr2_1:14927903-14927922 | None:intergenic | 30.0% | |
| TGAACATTGTAAGACAATGA+GGG | - | chr2_1:14927951-14927970 | Msa0197180:CDS | 30.0% | |
| AGCATATTCTGTGTGAATGA+TGG | + | chr2_1:14923637-14923656 | None:intergenic | 35.0% | |
| ATGGTATGGTATTTGTCGTT+TGG | + | chr2_1:14923723-14923742 | None:intergenic | 35.0% | |
| TGTGTTTGGATTGTATGGTA+TGG | + | chr2_1:14923737-14923756 | None:intergenic | 35.0% | |
| !!! | CTAAAGGAGAGGTTTTAGAA+GGG | + | chr2_1:14924027-14924046 | None:intergenic | 35.0% |
| !!! | TCTAAAGGAGAGGTTTTAGA+AGG | + | chr2_1:14924028-14924047 | None:intergenic | 35.0% |
| !! | ATTGCAAGAGTCCCTTATTT+TGG | - | chr2_1:14924308-14924327 | Msa0197180:intron | 35.0% |
| GGATTTAAATTGAAACTGGG+GGG | + | chr2_1:14924597-14924616 | None:intergenic | 35.0% | |
| GGGATTTAAATTGAAACTGG+GGG | + | chr2_1:14924598-14924617 | None:intergenic | 35.0% | |
| GGGGATTTAAATTGAAACTG+GGG | + | chr2_1:14924599-14924618 | None:intergenic | 35.0% | |
| GGGGGATTTAAATTGAAACT+GGG | + | chr2_1:14924600-14924619 | None:intergenic | 35.0% | |
| AAAGGACTAACTAACCCAAA+GGG | + | chr2_1:14924646-14924665 | None:intergenic | 35.0% | |
| ! | TTTTGGTCCCTAAATGTGTA+AGG | + | chr2_1:14924906-14924925 | None:intergenic | 35.0% |
| TGCTAAATCCATCTTCAATG+AGG | - | chr2_1:14925233-14925252 | Msa0197180:intron | 35.0% | |
| GCTAAATCCATCTTCAATGA+GGG | - | chr2_1:14925234-14925253 | Msa0197180:intron | 35.0% | |
| CTAAATCCATCTTCAATGAG+GGG | - | chr2_1:14925235-14925254 | Msa0197180:intron | 35.0% | |
| ! | GATGCCATGTTTGTGTATTT+TGG | - | chr2_1:14925403-14925422 | Msa0197180:intron | 35.0% |
| CATGTGGAGAATTGACATAA+AGG | + | chr2_1:14925904-14925923 | None:intergenic | 35.0% | |
| AACCAAAACTCTCATACATG+TGG | + | chr2_1:14925920-14925939 | None:intergenic | 35.0% | |
| !! | ACATGTATGAGAGTTTTGGT+TGG | - | chr2_1:14925919-14925938 | Msa0197180:intron | 35.0% |
| ACAAGATACCAGCACATTAA+AGG | + | chr2_1:14926043-14926062 | None:intergenic | 35.0% | |
| ATGCAATAAGTTTGGGTCTA+TGG | - | chr2_1:14926343-14926362 | Msa0197180:intron | 35.0% | |
| CAATATGTTGAGCAAGAAAC+CGG | + | chr2_1:14926404-14926423 | None:intergenic | 35.0% | |
| TTGGTATGAAATCAGTTGTG+GGG | - | chr2_1:14927007-14927026 | Msa0197180:intron | 35.0% | |
| AGAGGAGTTGAAAAAAATGC+CGG | - | chr2_1:14927332-14927351 | Msa0197180:intron | 35.0% | |
| TAATAATTCACAGCAACCTC+AGG | + | chr2_1:14927360-14927379 | None:intergenic | 35.0% | |
| GCTGTGAATTATTATACAGG+AGG | - | chr2_1:14927366-14927385 | Msa0197180:intron | 35.0% | |
| ! | GGAGGTGACTTGTATTTATT+TGG | - | chr2_1:14927384-14927403 | Msa0197180:intron | 35.0% |
| AGATGAATTTCAAACCTCCA+GGG | - | chr2_1:14927490-14927509 | Msa0197180:intron | 35.0% | |
| TTTCAAGACATACCTATCGT+AGG | + | chr2_1:14927533-14927552 | None:intergenic | 35.0% | |
| ! | CAAGCAAAGGGGTTTTTATT+AGG | + | chr2_1:14927763-14927782 | None:intergenic | 35.0% |
| TTAGTCAGAATACCAGGATT+AGG | - | chr2_1:14927789-14927808 | Msa0197180:intron | 35.0% | |
| CAGGATTAGGTTAATTGTCT+GGG | - | chr2_1:14927802-14927821 | Msa0197180:intron | 35.0% | |
| AGGATTAGGTTAATTGTCTG+GGG | - | chr2_1:14927803-14927822 | Msa0197180:intron | 35.0% | |
| ! | AGGCAATGAAGCATTTGATA+TGG | + | chr2_1:14927830-14927849 | None:intergenic | 35.0% |
| AGCAGTAAAATTTCTCACGT+TGG | - | chr2_1:14927863-14927882 | Msa0197180:CDS | 35.0% | |
| CTGAACATTGTAAGACAATG+AGG | - | chr2_1:14927950-14927969 | Msa0197180:CDS | 35.0% | |
| ! | TGTTACTTCTAATCCAGCTA+AGG | - | chr2_1:14928095-14928114 | Msa0197180:CDS | 35.0% |
| ATGAGATTCCTCTACAATGA+GGG | - | chr2_1:14928250-14928269 | Msa0197180:five_prime_UTR | 35.0% | |
| ATTCTGTGTGAATGATGGTC+CGG | + | chr2_1:14923632-14923651 | None:intergenic | 40.0% | |
| TACCAAGTACTAATAGTCGC+CGG | - | chr2_1:14923663-14923682 | Msa0197180:three_prime_UTR | 40.0% | |
| ! | TTTGGCATTTAGGACCATTC+CGG | + | chr2_1:14923685-14923704 | None:intergenic | 40.0% |
| ! | TATGGTATTTGTCGTTTGGC+GGG | + | chr2_1:14923719-14923738 | None:intergenic | 40.0% |
| ! | GTATGGTATTTGTCGTTTGG+CGG | + | chr2_1:14923720-14923739 | None:intergenic | 40.0% |
| !!! | GGTGGTGAGTTTTTTAGTGT+TGG | + | chr2_1:14923809-14923828 | None:intergenic | 40.0% |
| !! | ATGATGTTTGGTGGTGGAAA+TGG | + | chr2_1:14923830-14923849 | None:intergenic | 40.0% |
| ATTTCCACCACCAAACATCA+TGG | - | chr2_1:14923829-14923848 | Msa0197180:exon | 40.0% | |
| !! | TGATGATTTGTTGAGGTGTG+AGG | + | chr2_1:14923891-14923910 | None:intergenic | 40.0% |
| ! | AGTAACGGAATCTAAAGGAG+AGG | + | chr2_1:14924038-14924057 | None:intergenic | 40.0% |
| ! | ATACTTCATCGACTAGTGCT+TGG | - | chr2_1:14924080-14924099 | Msa0197180:intron | 40.0% |
| ! | TACTTCATCGACTAGTGCTT+GGG | - | chr2_1:14924081-14924100 | Msa0197180:intron | 40.0% |
| AATCAAACCTAAACCTCGAG+AGG | + | chr2_1:14924574-14924593 | None:intergenic | 40.0% | |
| GGGGGGATTTAAATTGAAAC+TGG | + | chr2_1:14924601-14924620 | None:intergenic | 40.0% | |
| CAAAGGACTAACTAACCCAA+AGG | + | chr2_1:14924647-14924666 | None:intergenic | 40.0% | |
| !! | CTTTGGGTTAGTTAGTCCTT+TGG | - | chr2_1:14924645-14924664 | Msa0197180:intron | 40.0% |
| ! | GAAGCCTTCTGTTGCATTTT+AGG | + | chr2_1:14924955-14924974 | None:intergenic | 40.0% |
| ATGAATTTGACAGGCCAACA+AGG | - | chr2_1:14925168-14925187 | Msa0197180:intron | 40.0% | |
| TAAGTTCCCCTCATTGAAGA+TGG | + | chr2_1:14925244-14925263 | None:intergenic | 40.0% | |
| TACAACAGAGTGAAGAATGG+CGG | + | chr2_1:14925270-14925289 | None:intergenic | 40.0% | |
| CTCTTCGAATCCTCATAAAC+TGG | + | chr2_1:14925588-14925607 | None:intergenic | 40.0% | |
| ! | CTCCACATGTATGAGAGTTT+TGG | - | chr2_1:14925915-14925934 | Msa0197180:intron | 40.0% |
| !!! | TGTATGAGAGTTTTGGTTGG+TGG | - | chr2_1:14925922-14925941 | Msa0197180:intron | 40.0% |
| ATGCATTTCATTCCAGCTCT+CGG | + | chr2_1:14925979-14925998 | None:intergenic | 40.0% | |
| ! | GACTGCTACTAAGATTTTGC+AGG | + | chr2_1:14926089-14926108 | None:intergenic | 40.0% |
| CAAACTAGGTCAGTTTGTAC+AGG | + | chr2_1:14926650-14926669 | None:intergenic | 40.0% | |
| !! | TCAAGGAACAAGGAGGTATT+TGG | - | chr2_1:14926839-14926858 | Msa0197180:intron | 40.0% |
| !! | CAAGGAACAAGGAGGTATTT+GGG | - | chr2_1:14926840-14926859 | Msa0197180:intron | 40.0% |
| CTACACGGCTAGAATAATCT+TGG | + | chr2_1:14927070-14927089 | None:intergenic | 40.0% | |
| CAAAAAGCTGAGTCTCTACA+CGG | + | chr2_1:14927085-14927104 | None:intergenic | 40.0% | |
| ! | CTACCTAGATTTTTCACTCG+AGG | - | chr2_1:14927426-14927445 | Msa0197180:intron | 40.0% |
| TTGCCTCGAGTGAAAAATCT+AGG | + | chr2_1:14927432-14927451 | None:intergenic | 40.0% | |
| TTCACTCGAGGCAAAAAAAC+TGG | - | chr2_1:14927438-14927457 | Msa0197180:intron | 40.0% | |
| CAGATGAATTTCAAACCTCC+AGG | - | chr2_1:14927489-14927508 | Msa0197180:intron | 40.0% | |
| ATCGTAGGCCTTCTAGTATT+TGG | + | chr2_1:14927518-14927537 | None:intergenic | 40.0% | |
| AATACTAGAAGGCCTACGAT+AGG | - | chr2_1:14927518-14927537 | Msa0197180:intron | 40.0% | |
| GATAGGTATGTCTTGAAACC+TGG | - | chr2_1:14927535-14927554 | Msa0197180:intron | 40.0% | |
| CCAGACAATTAACCTAATCC+TGG | + | chr2_1:14927804-14927823 | None:intergenic | 40.0% | |
| CCAGGATTAGGTTAATTGTC+TGG | - | chr2_1:14927801-14927820 | Msa0197180:intron | 40.0% | |
| TCTGCATCTGCATATGAATG+AGG | + | chr2_1:14928006-14928025 | None:intergenic | 40.0% | |
| TCATTCATATGCAGATGCAG+AGG | - | chr2_1:14928005-14928024 | Msa0197180:CDS | 40.0% | |
| TCAGTCTGTACAATTGAAGC+AGG | - | chr2_1:14928039-14928058 | Msa0197180:CDS | 40.0% | |
| ATGTCTTACTTCACCTTAGC+TGG | + | chr2_1:14928111-14928130 | None:intergenic | 40.0% | |
| AGCTAAGGTGAAGTAAGACA+TGG | - | chr2_1:14928110-14928129 | Msa0197180:exon | 40.0% | |
| GATGAGATTCCTCTACAATG+AGG | - | chr2_1:14928249-14928268 | Msa0197180:five_prime_UTR | 40.0% | |
| CTAAAAATCCACTACCGTGC+CGG | - | chr2_1:14923610-14923629 | Msa0197180:three_prime_UTR | 45.0% | |
| TTCCGGCGACTATTAGTACT+TGG | + | chr2_1:14923668-14923687 | None:intergenic | 45.0% | |
| AGTACTAATAGTCGCCGGAA+TGG | - | chr2_1:14923668-14923687 | Msa0197180:three_prime_UTR | 45.0% | |
| !!! | TGGCGGGTTTTGTTGTAGTT+TGG | + | chr2_1:14923703-14923722 | None:intergenic | 45.0% |
| !! | ATGTTTGGTGGTGGAAATGG+TGG | + | chr2_1:14923827-14923846 | None:intergenic | 45.0% |
| !! | GATTTGTTGAGGTGTGAGGT+TGG | + | chr2_1:14923887-14923906 | None:intergenic | 45.0% |
| GACGTAGAGGAAGACGATAA+CGG | + | chr2_1:14923943-14923962 | None:intergenic | 45.0% | |
| GCACGAATTGAAAGACGTAG+AGG | + | chr2_1:14923956-14923975 | None:intergenic | 45.0% | |
| TCGACTAGTGCTTGGGAAAA+AGG | - | chr2_1:14924088-14924107 | Msa0197180:intron | 45.0% | |
| CGACTAGTGCTTGGGAAAAA+GGG | - | chr2_1:14924089-14924108 | Msa0197180:intron | 45.0% | |
| GACTAGTGCTTGGGAAAAAG+GGG | - | chr2_1:14924090-14924109 | Msa0197180:intron | 45.0% | |
| TGTCAAGCGTTAAACCGACT+TGG | - | chr2_1:14924522-14924541 | Msa0197180:intron | 45.0% | |
| ! | GTCAAGCGTTAAACCGACTT+GGG | - | chr2_1:14924523-14924542 | Msa0197180:intron | 45.0% |
| AATTTAAATCCCCCCCCAAG+TGG | - | chr2_1:14924606-14924625 | Msa0197180:CDS | 45.0% | |
| AAACTCGGTATCTGGTCCAA+AGG | + | chr2_1:14924664-14924683 | None:intergenic | 45.0% | |
| CTTGTCACTACAGTCCTTGA+AGG | - | chr2_1:14924721-14924740 | Msa0197180:intron | 45.0% | |
| ! | CGCACATCTCCTTTGGAAAT+GGG | + | chr2_1:14925040-14925059 | None:intergenic | 45.0% |
| CCATTTCCAAAGGAGATGTG+CGG | - | chr2_1:14925038-14925057 | Msa0197180:intron | 45.0% | |
| AAAACACCGCACATCTCCTT+TGG | + | chr2_1:14925047-14925066 | None:intergenic | 45.0% | |
| GGGAACTATGAGAATGAGAC+TGG | + | chr2_1:14925090-14925109 | None:intergenic | 45.0% | |
| AATTTGACAGGCCAACAAGG+TGG | - | chr2_1:14925171-14925190 | Msa0197180:intron | 45.0% | |
| !! | GTTGAGTTGATCCACCTTGT+TGG | + | chr2_1:14925185-14925204 | None:intergenic | 45.0% |
| AGCTAGATTGCAGGTCATGA+AGG | + | chr2_1:14925207-14925226 | None:intergenic | 45.0% | |
| !! | TGGTTTGGTCTAACATGGTC+TGG | - | chr2_1:14925423-14925442 | Msa0197180:intron | 45.0% |
| TTTGGTCTAACATGGTCTGG+CGG | - | chr2_1:14925426-14925445 | Msa0197180:intron | 45.0% | |
| CATGTGTAGCAGTGAGAAGT+AGG | + | chr2_1:14925637-14925656 | None:intergenic | 45.0% | |
| AAGTTTGGGTCTATGGTTGC+AGG | - | chr2_1:14926350-14926369 | Msa0197180:intron | 45.0% | |
| TATGGTTGCAGGAACTTGGA+GGG | - | chr2_1:14926361-14926380 | Msa0197180:intron | 45.0% | |
| AAATTGAAGAGCCAAGCAGC+AGG | + | chr2_1:14926732-14926751 | None:intergenic | 45.0% | |
| TCTGCCATACTTCAGCCTAA+CGG | + | chr2_1:14927035-14927054 | None:intergenic | 45.0% | |
| ! | TCTAGTATTTGGAACCCTGG+AGG | + | chr2_1:14927507-14927526 | None:intergenic | 45.0% |
| ! | CCTTCTAGTATTTGGAACCC+TGG | + | chr2_1:14927510-14927529 | None:intergenic | 45.0% |
| CCAGGGTTCCAAATACTAGA+AGG | - | chr2_1:14927507-14927526 | Msa0197180:intron | 45.0% | |
| !! | ATTTTCATTGCAAGGGGTGC+AGG | - | chr2_1:14927609-14927628 | Msa0197180:intron | 45.0% |
| !! | TTTTCATTGCAAGGGGTGCA+GGG | - | chr2_1:14927610-14927629 | Msa0197180:intron | 45.0% |
| ATGAGGGCTTGCCAAACTTA+TGG | - | chr2_1:14927967-14927986 | Msa0197180:CDS | 45.0% | |
| TGAGGGCTTGCCAAACTTAT+GGG | - | chr2_1:14927968-14927987 | Msa0197180:CDS | 45.0% | |
| ACAATTGAAGCAGGCTGTGA+AGG | - | chr2_1:14928048-14928067 | Msa0197180:CDS | 45.0% | |
| CTCATACACCCTCATTGTAG+AGG | + | chr2_1:14928261-14928280 | None:intergenic | 45.0% | |
| !!! | TTTTATTTTTTCATTTTTTT+TGG | - | chr2_1:14925534-14925553 | Msa0197180:CDS | 5.0% |
| !!! | CGGCACGGTAGTGGATTTTT+AGG | + | chr2_1:14923612-14923631 | None:intergenic | 50.0% |
| TCCACCACCAAACATCATGG+CGG | - | chr2_1:14923832-14923851 | Msa0197180:exon | 50.0% | |
| !! | AGCGTTAAACCGACTTGGGT+TGG | - | chr2_1:14924527-14924546 | Msa0197180:intron | 50.0% |
| !! | TAAACCGACTTGGGTTGGCT+TGG | - | chr2_1:14924532-14924551 | Msa0197180:intron | 50.0% |
| !! | AAACCGACTTGGGTTGGCTT+GGG | - | chr2_1:14924533-14924552 | Msa0197180:intron | 50.0% |
| GTATGCTCCTCTCGAGGTTT+AGG | - | chr2_1:14924564-14924583 | Msa0197180:CDS | 50.0% | |
| TCAAATCCCACCGTCCACTT+GGG | + | chr2_1:14924623-14924642 | None:intergenic | 50.0% | |
| ACGGTGGGATTTGACCCTTT+GGG | - | chr2_1:14924629-14924648 | Msa0197180:intron | 50.0% | |
| TGCAACAGAAGGCTTCACTG+TGG | - | chr2_1:14924959-14924978 | Msa0197180:intron | 50.0% | |
| ! | CCGCACATCTCCTTTGGAAA+TGG | + | chr2_1:14925041-14925060 | None:intergenic | 50.0% |
| GCACAGTAGAGCTAGATTGC+AGG | + | chr2_1:14925216-14925235 | None:intergenic | 50.0% | |
| !!! | TTTTGGTTGGTGGAGACGAG+CGG | - | chr2_1:14925932-14925951 | Msa0197180:intron | 50.0% |
| ! | AAGTGCATTTTGCCGAGAGC+TGG | - | chr2_1:14925964-14925983 | Msa0197180:CDS | 50.0% |
| GGTCTATGGTTGCAGGAACT+TGG | - | chr2_1:14926357-14926376 | Msa0197180:intron | 50.0% | |
| CTATGGTTGCAGGAACTTGG+AGG | - | chr2_1:14926360-14926379 | Msa0197180:intron | 50.0% | |
| AGGAACTTGGAGGGAATGCT+TGG | - | chr2_1:14926370-14926389 | Msa0197180:intron | 50.0% | |
| AACTTGGAGGGAATGCTTGG+TGG | - | chr2_1:14926373-14926392 | Msa0197180:intron | 50.0% | |
| ! | GGAATGCTTGGTGGTTTGAC+CGG | - | chr2_1:14926382-14926401 | Msa0197180:intron | 50.0% |
| ! | AAGCAGCAGGTTGGAATGCT+AGG | + | chr2_1:14926719-14926738 | None:intergenic | 50.0% |
| TAGCATTCCAACCTGCTGCT+TGG | - | chr2_1:14926718-14926737 | Msa0197180:intron | 50.0% | |
| !! | GAAAAAAATGCCGGCTCCTG+AGG | - | chr2_1:14927341-14927360 | Msa0197180:intron | 50.0% |
| GCCAAACTTATGGGAACCTC+CGG | - | chr2_1:14927977-14927996 | Msa0197180:CDS | 50.0% | |
| ACCGGAGGTTCCCATAAGTT+TGG | + | chr2_1:14927981-14928000 | None:intergenic | 50.0% | |
| CTGCATATGAATGAGGCGAC+CGG | + | chr2_1:14927999-14928018 | None:intergenic | 50.0% | |
| GTGTGAATGATGGTCCGGCA+CGG | + | chr2_1:14923627-14923646 | None:intergenic | 55.0% | |
| ACCAAACATCATGGCGGCGA+CGG | - | chr2_1:14923838-14923857 | Msa0197180:exon | 55.0% | |
| !! | AACCGACTTGGGTTGGCTTG+GGG | - | chr2_1:14924534-14924553 | Msa0197180:intron | 55.0% |
| ! | CTCGAGAGGAGCATACTCCA+AGG | + | chr2_1:14924560-14924579 | None:intergenic | 55.0% |
| CTTGGAGTATGCTCCTCTCG+AGG | - | chr2_1:14924558-14924577 | Msa0197180:intron | 55.0% | |
| TAAATCCCCCCCCAAGTGGA+CGG | - | chr2_1:14924610-14924629 | Msa0197180:CDS | 55.0% | |
| AAATCCCACCGTCCACTTGG+GGG | + | chr2_1:14924621-14924640 | None:intergenic | 55.0% | |
| CAAATCCCACCGTCCACTTG+GGG | + | chr2_1:14924622-14924641 | None:intergenic | 55.0% | |
| GTCAAATCCCACCGTCCACT+TGG | + | chr2_1:14924624-14924643 | None:intergenic | 55.0% | |
| GACGGTGGGATTTGACCCTT+TGG | - | chr2_1:14924628-14924647 | Msa0197180:intron | 55.0% | |
| CTCAGGGCAGCGTTTGTGTT+GGG | + | chr2_1:14925110-14925129 | None:intergenic | 55.0% | |
| TAACATGGTCTGGCGGCATC+TGG | - | chr2_1:14925433-14925452 | Msa0197180:intron | 55.0% | |
| TGAAGAGCCAAGCAGCAGGT+TGG | + | chr2_1:14926728-14926747 | None:intergenic | 55.0% | |
| ATCAGTTGTGGGGAGCCGTT+AGG | - | chr2_1:14927017-14927036 | Msa0197180:intron | 55.0% | |
| GGAGCCGTTAGGCTGAAGTA+TGG | - | chr2_1:14927028-14927047 | Msa0197180:intron | 55.0% | |
| TTCACAGCAACCTCAGGAGC+CGG | + | chr2_1:14927354-14927373 | None:intergenic | 55.0% | |
| CATATGAATGAGGCGACCGG+AGG | + | chr2_1:14927996-14928015 | None:intergenic | 55.0% | |
| ATGATGGTCCGGCACGGTAG+TGG | + | chr2_1:14923621-14923640 | None:intergenic | 60.0% | |
| ! | GCCGCCATGATGTTTGGTGG+TGG | + | chr2_1:14923836-14923855 | None:intergenic | 60.0% |
| GTCGCCGCCATGATGTTTGG+TGG | + | chr2_1:14923839-14923858 | None:intergenic | 60.0% | |
| AATCCCACCGTCCACTTGGG+GGG | + | chr2_1:14924620-14924639 | None:intergenic | 60.0% | |
| GCTCAGGGCAGCGTTTGTGT+TGG | + | chr2_1:14925111-14925130 | None:intergenic | 60.0% | |
| TCTGGCGGCATCTGGTCTGA+TGG | - | chr2_1:14925441-14925460 | Msa0197180:intron | 60.0% | |
| GCCGTCGCCGCCATGATGTT+TGG | + | chr2_1:14923842-14923861 | None:intergenic | 65.0% | |
| GGCCCCAAGCCAACCCAAGT+CGG | + | chr2_1:14924539-14924558 | None:intergenic | 65.0% | |
| !! | CTTGGGTTGGCTTGGGGCCT+TGG | - | chr2_1:14924540-14924559 | Msa0197180:intron | 65.0% |
| ATCCCACCGTCCACTTGGGG+GGG | + | chr2_1:14924619-14924638 | None:intergenic | 65.0% | |
| ATCCCCCCCCAAGTGGACGG+TGG | - | chr2_1:14924613-14924632 | Msa0197180:CDS | 70.0% | |
| TCCCCCCCCAAGTGGACGGT+GGG | - | chr2_1:14924614-14924633 | Msa0197180:CDS | 70.0% | |
| TCCCACCGTCCACTTGGGGG+GGG | + | chr2_1:14924618-14924637 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 14923600 | 14928369 | 14923600 | ID=Msa0197180;Name=Msa0197180 |
| chr2_1 | mRNA | 14923600 | 14928369 | 14923600 | ID=Msa0197180-mRNA-1;Parent=Msa0197180;Name=Msa0197180-mRNA-1;_AED=0.06;_eAED=0.06;_QI=248|1|1|1|1|1|8|244|342 |
| chr2_1 | exon | 14923600 | 14924061 | 14923600 | ID=Msa0197180-mRNA-1:exon:6381;Parent=Msa0197180-mRNA-1 |
| chr2_1 | exon | 14924430 | 14924477 | 14924430 | ID=Msa0197180-mRNA-1:exon:6380;Parent=Msa0197180-mRNA-1 |
| chr2_1 | exon | 14924564 | 14924635 | 14924564 | ID=Msa0197180-mRNA-1:exon:6379;Parent=Msa0197180-mRNA-1 |
| chr2_1 | exon | 14925116 | 14925184 | 14925116 | ID=Msa0197180-mRNA-1:exon:6378;Parent=Msa0197180-mRNA-1 |
| chr2_1 | exon | 14925489 | 14925597 | 14925489 | ID=Msa0197180-mRNA-1:exon:6377;Parent=Msa0197180-mRNA-1 |
| chr2_1 | exon | 14925953 | 14926068 | 14925953 | ID=Msa0197180-mRNA-1:exon:6376;Parent=Msa0197180-mRNA-1 |
| chr2_1 | exon | 14927640 | 14927733 | 14927640 | ID=Msa0197180-mRNA-1:exon:6375;Parent=Msa0197180-mRNA-1 |
| chr2_1 | exon | 14927819 | 14928369 | 14927819 | ID=Msa0197180-mRNA-1:exon:6374;Parent=Msa0197180-mRNA-1 |
| chr2_1 | five_prime_UTR | 14928122 | 14928369 | 14928122 | ID=Msa0197180-mRNA-1:five_prime_utr;Parent=Msa0197180-mRNA-1 |
| chr2_1 | CDS | 14927819 | 14928121 | 14927819 | ID=Msa0197180-mRNA-1:cds;Parent=Msa0197180-mRNA-1 |
| chr2_1 | CDS | 14927640 | 14927733 | 14927640 | ID=Msa0197180-mRNA-1:cds;Parent=Msa0197180-mRNA-1 |
| chr2_1 | CDS | 14925953 | 14926068 | 14925953 | ID=Msa0197180-mRNA-1:cds;Parent=Msa0197180-mRNA-1 |
| chr2_1 | CDS | 14925489 | 14925597 | 14925489 | ID=Msa0197180-mRNA-1:cds;Parent=Msa0197180-mRNA-1 |
| chr2_1 | CDS | 14925116 | 14925184 | 14925116 | ID=Msa0197180-mRNA-1:cds;Parent=Msa0197180-mRNA-1 |
| chr2_1 | CDS | 14924564 | 14924635 | 14924564 | ID=Msa0197180-mRNA-1:cds;Parent=Msa0197180-mRNA-1 |
| chr2_1 | CDS | 14924430 | 14924477 | 14924430 | ID=Msa0197180-mRNA-1:cds;Parent=Msa0197180-mRNA-1 |
| chr2_1 | CDS | 14923844 | 14924061 | 14923844 | ID=Msa0197180-mRNA-1:cds;Parent=Msa0197180-mRNA-1 |
| chr2_1 | three_prime_UTR | 14923600 | 14923843 | 14923600 | ID=Msa0197180-mRNA-1:three_prime_utr;Parent=Msa0197180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
