Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376340 | XP_003602229.2 | 98.818 | 677 | 8 | 0 | 1 | 677 | 1 | 677 | 0.0 | 1381 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376340 | sp|Q9LV04|PAP14_ARATH | 67.834 | 628 | 189 | 5 | 52 | 675 | 51 | 669 | 0.0 | 874 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376340 | G7J6U8 | 98.818 | 677 | 8 | 0 | 1 | 677 | 1 | 677 | 0.0 | 1381 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035980 | Msa0376340 | 0.802972 | 4.353190e-49 | -8.615850e-47 |
| Msa0036060 | Msa0376340 | 0.806100 | 9.689941e-50 | -8.615850e-47 |
| Msa0197180 | Msa0376340 | 0.880637 | 4.660652e-70 | -8.615850e-47 |
| Msa0376340 | Msa0379380 | 0.800873 | 1.174802e-48 | -8.615850e-47 |
| Msa0376340 | Msa0424780 | 0.974511 | 2.763889e-138 | -8.615850e-47 |
| Msa0376340 | Msa0435010 | 0.807949 | 3.936361e-50 | -8.615850e-47 |
| Msa0376340 | Msa0504410 | 0.812283 | 4.583220e-51 | -8.615850e-47 |
| Msa0376340 | Msa0516160 | 0.993822 | 1.763613e-202 | -8.615850e-47 |
| Msa0376340 | Msa0629440 | -0.861770 | 8.125015e-64 | -8.615850e-47 |
| Msa0376340 | Msa0644770 | -0.808172 | 3.528881e-50 | -8.615850e-47 |
| Msa0376340 | Msa0667070 | -0.857559 | 1.502824e-62 | -8.615850e-47 |
| Msa0376340 | Msa0713210 | 0.832313 | 1.015149e-55 | -8.615850e-47 |
| Msa0376340 | Msa0713220 | 0.817858 | 2.651833e-52 | -8.615850e-47 |
| Msa0376340 | Msa0713230 | 0.863943 | 1.734368e-64 | -8.615850e-47 |
| Msa0376340 | Msa0754350 | 0.800344 | 1.506264e-48 | -8.615850e-47 |
| Msa0376340 | Msa0755080 | 0.871563 | 6.214791e-67 | -8.615850e-47 |
| Msa0376340 | Msa0772500 | 0.811483 | 6.844336e-51 | -8.615850e-47 |
| Msa0376340 | Msa0796950 | 0.836068 | 1.162209e-56 | -8.615850e-47 |
| Msa0376340 | Msa0797000 | 0.814469 | 1.516769e-51 | -8.615850e-47 |
| Msa0376340 | Msa0801360 | 0.817170 | 3.788003e-52 | -8.615850e-47 |
| Msa0376340 | Msa0834450 | 0.869863 | 2.250897e-66 | -8.615850e-47 |
| Msa0376340 | Msa0839830 | 0.817346 | 3.458598e-52 | -8.615850e-47 |
| Msa0376340 | Msa1012920 | 0.807409 | 5.126995e-50 | -8.615850e-47 |
| Msa0376340 | Msa1075590 | 0.813570 | 2.393607e-51 | -8.615850e-47 |
| Msa0376340 | Msa1137090 | 0.816737 | 4.740309e-52 | -8.615850e-47 |
| Msa0376340 | Msa1162980 | 0.810135 | 1.339609e-50 | -8.615850e-47 |
| Msa0376340 | Msa1174870 | 0.803782 | 2.957816e-49 | -8.615850e-47 |
| Msa0376340 | Msa1204600 | -0.828735 | 7.619749e-55 | -8.615850e-47 |
| Msa0376340 | Msa1232270 | 0.812269 | 4.615519e-51 | -8.615850e-47 |
| Msa0376340 | Msa1329420 | -0.800875 | 1.173898e-48 | -8.615850e-47 |
| Msa0376340 | Msa1412620 | -0.839811 | 1.267412e-57 | -8.615850e-47 |
| Msa0238940 | Msa0376340 | 0.878101 | 3.687124e-69 | -8.615850e-47 |
| Msa0260470 | Msa0376340 | 0.800302 | 1.536272e-48 | -8.615850e-47 |
| Msa0304110 | Msa0376340 | 0.804112 | 2.526109e-49 | -8.615850e-47 |
| Msa0308770 | Msa0376340 | 0.851320 | 9.584372e-61 | -8.615850e-47 |
| Msa0309480 | Msa0376340 | 0.800020 | 1.753268e-48 | -8.615850e-47 |
| Msa0316750 | Msa0376340 | 0.865596 | 5.266345e-65 | -8.615850e-47 |
| Msa0341190 | Msa0376340 | 0.804360 | 2.242828e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376340 | MtrunA17_Chr3g0126681 | 98.818 | 677 | 8 | 0 | 1 | 677 | 1 | 677 | 0.0 | 1381 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0376340 | AT5G53450.1 | 67.834 | 628 | 189 | 5 | 52 | 675 | 51 | 669 | 0.0 | 874 |
| Msa0376340 | AT5G53450.2 | 69.140 | 593 | 175 | 4 | 87 | 675 | 1 | 589 | 0.0 | 849 |
| Msa0376340 | AT5G53450.3 | 73.171 | 410 | 104 | 2 | 52 | 460 | 51 | 455 | 0.0 | 620 |
Find 217 sgRNAs with CRISPR-Local
Find 476 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGAATAGGAGATATTT+AGG | 0.120251 | 3_1:+76382530 | Msa0376340:five_prime_UTR |
| GTTCAAAATGTCAGACTTTA+AGG | 0.129862 | 3_1:+76383327 | Msa0376340:CDS |
| TCTTCTTCCCTTTCTCATTC+TGG | 0.159701 | 3_1:+76382680 | Msa0376340:five_prime_UTR |
| TGCCCACTTCATTGACTTAT+TGG | 0.179035 | 3_1:+76387756 | Msa0376340:CDS |
| AACTGGGCCATACCCGATTT+TGG | 0.210340 | 3_1:+76383078 | Msa0376340:CDS |
| TCCCTTTCTCATTCTGGTTC+TGG | 0.211362 | 3_1:+76382686 | Msa0376340:five_prime_UTR |
| CTTTGATATGTCTGTCTATT+GGG | 0.212760 | 3_1:-76384387 | None:intergenic |
| ACTTTGATATGTCTGTCTAT+TGG | 0.221644 | 3_1:-76384388 | None:intergenic |
| TTTGACAAATCAAATATTTC+AGG | 0.222651 | 3_1:-76388619 | None:intergenic |
| AACTGGCTGGAGCTGCTTCC+AGG | 0.254995 | 3_1:+76388097 | Msa0376340:CDS |
| TTGATGAGAGATCTTCTAAT+TGG | 0.256001 | 3_1:+76384177 | Msa0376340:CDS |
| CTCGTTCTTCGAGGGGTTAA+TGG | 0.264678 | 3_1:+76388676 | Msa0376340:CDS |
| CCAAACCTTCTCGGAGAATA+AGG | 0.274308 | 3_1:+76387053 | Msa0376340:CDS |
| CTGGAGGTCCCGCAATTTCT+AGG | 0.275529 | 3_1:+76384133 | Msa0376340:CDS |
| TGGAGCTGCTTCCAGGAAAA+TGG | 0.295461 | 3_1:+76388104 | Msa0376340:CDS |
| AATGGTAATGGGAGAGCTTA+TGG | 0.295872 | 3_1:+76385346 | Msa0376340:CDS |
| CGCAGATGCTTGATAGGAAC+TGG | 0.312588 | 3_1:+76386993 | Msa0376340:intron |
| CCACAAAAGACCTTGTAAAT+AGG | 0.336553 | 3_1:-76388708 | None:intergenic |
| ATGCAAACGGAAGAGGTCTT+TGG | 0.344391 | 3_1:-76383277 | None:intergenic |
| TTGCTAGCAATAAAGATAAA+AGG | 0.349174 | 3_1:-76387030 | None:intergenic |
| ACAATGGCACTTTGTAGAAC+TGG | 0.349658 | 3_1:+76383061 | Msa0376340:exon |
| AAGAATGATACAAAAGTTTA+CGG | 0.352849 | 3_1:-76383775 | None:intergenic |
| TCTTACTCAATGCAAGTTCA+TGG | 0.355670 | 3_1:+76383794 | Msa0376340:CDS |
| ACAGTTGTTTGGATGCTCTA+AGG | 0.356940 | 3_1:+76387394 | Msa0376340:intron |
| CTTTCCTTCGTCTCTGACAT+TGG | 0.357555 | 3_1:+76388244 | Msa0376340:CDS |
| AGGACATTACTCTCCAAAAT+CGG | 0.359879 | 3_1:-76383091 | None:intergenic |
| TCATGAATTACCTTTGGCTT+TGG | 0.361109 | 3_1:-76387796 | None:intergenic |
| AGATTGGCTTCAAACTTTAG+AGG | 0.363419 | 3_1:+76384059 | Msa0376340:CDS |
| TGCTAGCAACCAAACCTTCT+CGG | 0.365898 | 3_1:+76387044 | Msa0376340:CDS |
| AGCTAAAGCCTCCTCATTGC+CGG | 0.372894 | 3_1:-76388416 | None:intergenic |
| GCATTTCAGATAACTAAGTT+TGG | 0.373211 | 3_1:-76388890 | None:intergenic |
| TTTCCAGCCTCAACTCTGTA+TGG | 0.381724 | 3_1:-76384351 | None:intergenic |
| CCTTATTCTCCGAGAAGGTT+TGG | 0.381787 | 3_1:-76387053 | None:intergenic |
| CCTGTTCCCCTGCGTTTCGC+TGG | 0.387171 | 3_1:+76383154 | Msa0376340:CDS |
| TAAGGCACCCATTCCTTTGT+GGG | 0.389110 | 3_1:+76387412 | Msa0376340:CDS |
| TGAAATGTTCTACAGTTGTT+TGG | 0.391603 | 3_1:+76387383 | Msa0376340:intron |
| TTGGCTGCAGGGAGACTTGA+TGG | 0.392350 | 3_1:-76388490 | None:intergenic |
| AGGCTCTCATTCCGCCCTTC+CGG | 0.392663 | 3_1:+76388397 | Msa0376340:CDS |
| CTAAGGCACCCATTCCTTTG+TGG | 0.393568 | 3_1:+76387411 | Msa0376340:CDS |
| TCAAGAAGTCTGTTCTGGTT+AGG | 0.393706 | 3_1:+76388918 | Msa0376340:three_prime_UTR |
| AAGAGAATAGGAGATATTTA+GGG | 0.395033 | 3_1:+76382531 | Msa0376340:five_prime_UTR |
| TGCGAGGATGGTTCAAATAG+AGG | 0.402772 | 3_1:+76385169 | Msa0376340:CDS |
| AACCCGTGGCAAAACGTTCC+CGG | 0.402816 | 3_1:+76382576 | Msa0376340:five_prime_UTR |
| TGGTTCAAATAGAGGCTCTA+TGG | 0.411364 | 3_1:+76385177 | Msa0376340:CDS |
| CCAGCGAAACGCAGGGGAAC+AGG | 0.418450 | 3_1:-76383154 | None:intergenic |
| ATGGAGTTGATGAATAATAT+AGG | 0.418735 | 3_1:-76382643 | None:intergenic |
| ATCTTGGCCCACAAAGGAAT+GGG | 0.427323 | 3_1:-76387419 | None:intergenic |
| GAACCACTACCACCACTTGC+AGG | 0.429048 | 3_1:-76383830 | None:intergenic |
| ATTGGATTCTCAGTCATGAT+TGG | 0.433535 | 3_1:+76388262 | Msa0376340:CDS |
| ATTGCACTGGGAGGCATGTT+GGG | 0.434475 | 3_1:+76388137 | Msa0376340:CDS |
| AACTCTCCATATGGAAATGC+TGG | 0.437695 | 3_1:+76386869 | Msa0376340:CDS |
| TCTTCATTTATACTAAGAGC+TGG | 0.440657 | 3_1:+76388337 | Msa0376340:CDS |
| CCCTGCAGCCAAGTTTGCGT+CGG | 0.442632 | 3_1:+76388501 | Msa0376340:CDS |
| CAAGGTTGCTCGTTCTTCGA+GGG | 0.443241 | 3_1:+76388668 | Msa0376340:CDS |
| CTTGATAGGAACTGGGGTGC+TGG | 0.444714 | 3_1:+76387001 | Msa0376340:CDS |
| ACTGGCTTCAACAGTCAGAT+TGG | 0.445941 | 3_1:+76384043 | Msa0376340:CDS |
| GCAAGGTTAAGGACAGTGTT+AGG | 0.447501 | 3_1:+76383494 | Msa0376340:CDS |
| GATCGTGTTAGCATTGGCCT+TGG | 0.450399 | 3_1:+76383355 | Msa0376340:CDS |
| CGTGTTAGCATTGGCCTTGG+TGG | 0.453499 | 3_1:+76383358 | Msa0376340:CDS |
| CGCAATTGCCTAGAAATTGC+GGG | 0.453953 | 3_1:-76384141 | None:intergenic |
| ATCTGCATCTGCTTCTTCAA+TGG | 0.455111 | 3_1:+76383237 | Msa0376340:CDS |
| CCCGACGCAAACTTGGCTGC+AGG | 0.456334 | 3_1:-76388502 | None:intergenic |
| TTAGCATTGGCCTTGGTGGA+CGG | 0.458317 | 3_1:+76383362 | Msa0376340:CDS |
| CTCGGCAGAAACTCTCCATA+TGG | 0.459506 | 3_1:+76386860 | Msa0376340:CDS |
| AATATCACCCGACGCAAACT+TGG | 0.460107 | 3_1:-76388509 | None:intergenic |
| CGTTTGCATGGAGGAGGAAA+CGG | 0.461428 | 3_1:+76383291 | Msa0376340:CDS |
| TCAAGGTTGCTCGTTCTTCG+AGG | 0.464225 | 3_1:+76388667 | Msa0376340:CDS |
| TGTAAGCCAGCATTTCCATA+TGG | 0.466848 | 3_1:-76386875 | None:intergenic |
| TAGCATTGGCCTTGGTGGAC+GGG | 0.468949 | 3_1:+76383363 | Msa0376340:CDS |
| GATATTATCAGATGGGGTCT+AGG | 0.469138 | 3_1:+76387462 | Msa0376340:CDS |
| CATTCCTTTGTGGGCCAAGA+TGG | 0.470311 | 3_1:+76387421 | Msa0376340:CDS |
| TTGACAAATCAAATATTTCA+GGG | 0.473307 | 3_1:-76388618 | None:intergenic |
| TTGATGGAAACTCCTTGAAA+GGG | 0.473643 | 3_1:-76388474 | None:intergenic |
| GCGGATGAGGTGGTGTTTGA+AGG | 0.474409 | 3_1:+76383472 | Msa0376340:CDS |
| TATTGCACTGGGAGGCATGT+TGG | 0.474879 | 3_1:+76388136 | Msa0376340:CDS |
| ATGTTTGCGACAGCTTATGA+TGG | 0.477520 | 3_1:+76386832 | Msa0376340:CDS |
| TCGAGGAAAACGAGCAATAG+AGG | 0.477773 | 3_1:+76383654 | Msa0376340:CDS |
| CTCCTCCATGCAAACGGAAG+AGG | 0.478760 | 3_1:-76383284 | None:intergenic |
| TGGCGCCTATTGTATTGCAC+TGG | 0.478793 | 3_1:+76388124 | Msa0376340:CDS |
| CTTCAAGGTATTGAAGAAGC+TGG | 0.479242 | 3_1:+76383748 | Msa0376340:intron |
| ATTACCTTTGGCTTTGGATG+AGG | 0.480526 | 3_1:-76387790 | None:intergenic |
| TACTTAACAGGTCGGTACAC+TGG | 0.480880 | 3_1:+76385129 | Msa0376340:intron |
| CCTGCAGCCAAGTTTGCGTC+GGG | 0.481345 | 3_1:+76388502 | Msa0376340:CDS |
| GCCTCCCAGTGCAATACAAT+AGG | 0.481435 | 3_1:-76388129 | None:intergenic |
| TTGAACTTTGCGAATATCAA+AGG | 0.482258 | 3_1:-76385371 | None:intergenic |
| GAGAAAGGGAAGAAGAGTAT+TGG | 0.483685 | 3_1:-76382673 | None:intergenic |
| CACTGGACGAAGAATCTGTT+AGG | 0.487203 | 3_1:+76384091 | Msa0376340:CDS |
| CACCAGAACCAGAATGAGAA+AGG | 0.489960 | 3_1:-76382688 | None:intergenic |
| ATCTGTGTTACAAAGATGCA+TGG | 0.496023 | 3_1:+76385307 | Msa0376340:intron |
| CAGTCATGATTGGTCAGGAC+TGG | 0.496294 | 3_1:+76388272 | Msa0376340:CDS |
| TAGTAGAGAATCAAAGTTGA+AGG | 0.500017 | 3_1:+76388216 | Msa0376340:CDS |
| CATCTTGGCCCACAAAGGAA+TGG | 0.503376 | 3_1:-76387420 | None:intergenic |
| AAGGTAGGAGAAGACACAAC+TGG | 0.503564 | 3_1:+76384114 | Msa0376340:CDS |
| ATTCTCAGTCATGATTGGTC+AGG | 0.504324 | 3_1:+76388267 | Msa0376340:CDS |
| AAAGACCTCTTCCGTTTGCA+TGG | 0.506817 | 3_1:+76383279 | Msa0376340:CDS |
| CTCTTCCGTTTGCATGGAGG+AGG | 0.508865 | 3_1:+76383285 | Msa0376340:CDS |
| CTTCATTTATACTAAGAGCT+GGG | 0.510302 | 3_1:+76388338 | Msa0376340:CDS |
| GGTGTTTGAAGGCAAGGTTA+AGG | 0.513946 | 3_1:+76383483 | Msa0376340:CDS |
| GACGGGACTACTCGCCATCT+TGG | 0.515034 | 3_1:-76387435 | None:intergenic |
| ATAGGAACTGGGGTGCTGGT+TGG | 0.515505 | 3_1:+76387005 | Msa0376340:CDS |
| CATGACAAAGCTGGTAAAAG+AGG | 0.515642 | 3_1:+76388298 | Msa0376340:CDS |
| GAAGAGTATTGGATGGAACA+TGG | 0.515807 | 3_1:-76382662 | None:intergenic |
| TAACTCTTGTGTTATACAAA+GGG | 0.516202 | 3_1:-76383597 | None:intergenic |
| TTTAGAGGCCACTCTTGCAC+TGG | 0.516388 | 3_1:+76384074 | Msa0376340:CDS |
| CCTCCTGTCCGTGTACTAGT+TGG | 0.516400 | 3_1:+76388175 | Msa0376340:CDS |
| CACATATAAATTTGTCGACA+AGG | 0.518285 | 3_1:+76383122 | Msa0376340:CDS |
| CGTTTCCTCCTCCATGCAAA+CGG | 0.520200 | 3_1:-76383290 | None:intergenic |
| GTTCATTTATCCTAGTCCAC+GGG | 0.521851 | 3_1:+76383849 | Msa0376340:CDS |
| GGACATTACTCTCCAAAATC+GGG | 0.523573 | 3_1:-76383090 | None:intergenic |
| CTTGATGGAAACTCCTTGAA+AGG | 0.524857 | 3_1:-76388475 | None:intergenic |
| ATTTACATGAAAGTGTGCTC+TGG | 0.524859 | 3_1:-76388848 | None:intergenic |
| ATGATTGTCCAGCGAAACGC+AGG | 0.526569 | 3_1:-76383162 | None:intergenic |
| CTGTTCTGGTTAGGAACTGT+AGG | 0.528092 | 3_1:+76388927 | Msa0376340:three_prime_UTR |
| CAATGGCACTTTGTAGAACT+GGG | 0.530134 | 3_1:+76383062 | Msa0376340:exon |
| TGGTAAAAGAGGAAGGGTGC+AGG | 0.532874 | 3_1:+76388309 | Msa0376340:CDS |
| ATCTGATAATATCCATCGAC+GGG | 0.535110 | 3_1:-76387452 | None:intergenic |
| GGTTCATTTATCCTAGTCCA+CGG | 0.538254 | 3_1:+76383848 | Msa0376340:CDS |
| CCGCCCTTCCGGCAATGAGG+AGG | 0.538522 | 3_1:+76388408 | Msa0376340:CDS |
| GTACATTTATCGTCAGCCTC+AGG | 0.540143 | 3_1:+76387512 | Msa0376340:CDS |
| AAGGGAAGAAGAGTATTGGA+TGG | 0.542115 | 3_1:-76382669 | None:intergenic |
| GTCAGAGACGAAGGAAAGGT+TGG | 0.543516 | 3_1:-76388239 | None:intergenic |
| TTCCAGCCTCAACTCTGTAT+GGG | 0.543666 | 3_1:-76384350 | None:intergenic |
| AGATACATACCCCGTGGACT+AGG | 0.544042 | 3_1:-76383859 | None:intergenic |
| AACATAATAAGAAAGAGAAT+AGG | 0.544411 | 3_1:+76382519 | Msa0376340:five_prime_UTR |
| TGAGGTGGTGTTTGAAGGCA+AGG | 0.544552 | 3_1:+76383477 | Msa0376340:CDS |
| CTAGTACACGGACAGGAGGT+TGG | 0.544865 | 3_1:-76388171 | None:intergenic |
| ACTTAACAGGTCGGTACACT+GGG | 0.545500 | 3_1:+76385130 | Msa0376340:intron |
| ATAACTCTTGTGTTATACAA+AGG | 0.547349 | 3_1:-76383598 | None:intergenic |
| GATTGTGTGTGGAACTTATG+TGG | 0.547710 | 3_1:+76388642 | Msa0376340:CDS |
| TTACTCTCCAAAATCGGGTA+TGG | 0.548971 | 3_1:-76383085 | None:intergenic |
| GACAAATCAAATATTTCAGG+GGG | 0.549563 | 3_1:-76388616 | None:intergenic |
| AATTTATATGTGAATAAGCT+AGG | 0.549732 | 3_1:-76383111 | None:intergenic |
| TGCCCATACAGAGTTGAGGC+TGG | 0.551335 | 3_1:+76384348 | Msa0376340:CDS |
| GTCGATGGATATTATCAGAT+GGG | 0.551619 | 3_1:+76387455 | Msa0376340:CDS |
| TAGAGGCTCTATGGAAAACA+TGG | 0.554608 | 3_1:+76385186 | Msa0376340:CDS |
| GATCAGCTCTCCTATTTACA+AGG | 0.554698 | 3_1:+76388698 | Msa0376340:CDS |
| TTCTTCGTCCAGTGCAAGAG+TGG | 0.555251 | 3_1:-76384082 | None:intergenic |
| TGAATAATATAGGAAGAAGA+AGG | 0.557377 | 3_1:-76382633 | None:intergenic |
| TTCAAGGTATTGAAGAAGCT+GGG | 0.558924 | 3_1:+76383749 | Msa0376340:intron |
| ATCTCGTTGCCTGCAAGTGG+TGG | 0.559120 | 3_1:+76383821 | Msa0376340:CDS |
| AAAGCCTCCTCATTGCCGGA+AGG | 0.559182 | 3_1:-76388412 | None:intergenic |
| ATGGCGAGTAGTCCCGTCGA+TGG | 0.559384 | 3_1:+76387440 | Msa0376340:CDS |
| AGGAAACGGATCATGTTATG+AGG | 0.560637 | 3_1:+76383305 | Msa0376340:CDS |
| TTGCCTGCAAGTGGTGGTAG+TGG | 0.560869 | 3_1:+76383827 | Msa0376340:CDS |
| TCGCAATTGCCTAGAAATTG+CGG | 0.561333 | 3_1:-76384142 | None:intergenic |
| CGTCGATGGATATTATCAGA+TGG | 0.561808 | 3_1:+76387454 | Msa0376340:CDS |
| GCTCTATGGAAAACATGGAC+AGG | 0.562416 | 3_1:+76385191 | Msa0376340:CDS |
| GAAGAATCTGTTAGGAAGGT+AGG | 0.562509 | 3_1:+76384099 | Msa0376340:CDS |
| GCATACCTTATTCTCCGAGA+AGG | 0.565490 | 3_1:-76387058 | None:intergenic |
| GACTGGCCTCATGACAAAGC+TGG | 0.565510 | 3_1:+76388289 | Msa0376340:CDS |
| ACCAGAACCAGAATGAGAAA+GGG | 0.566680 | 3_1:-76382687 | None:intergenic |
| ACAAAGCTGGTAAAAGAGGA+AGG | 0.567006 | 3_1:+76388302 | Msa0376340:CDS |
| GTTAATTACCTGCATAGTCA+TGG | 0.568531 | 3_1:+76384322 | Msa0376340:CDS |
| CCGACGCAAACTTGGCTGCA+GGG | 0.569318 | 3_1:-76388501 | None:intergenic |
| GTTGCGTGCTACAGAACGCC+GGG | 0.570077 | 3_1:-76382594 | None:intergenic |
| TTCAATGGAGTCGCATGAAG+AGG | 0.571118 | 3_1:+76383252 | Msa0376340:CDS |
| CACGGACAGGAGGTTGGCGA+AGG | 0.572597 | 3_1:-76388165 | None:intergenic |
| AAGCCTCCTCATTGCCGGAA+GGG | 0.572759 | 3_1:-76388411 | None:intergenic |
| TCTGTGTTACAAAGATGCAT+GGG | 0.575090 | 3_1:+76385308 | Msa0376340:intron |
| GGGCAAGACCATGACTATGC+AGG | 0.575441 | 3_1:-76384330 | None:intergenic |
| GCTGGACAATCATCAAATGC+AGG | 0.586031 | 3_1:+76383172 | Msa0376340:CDS |
| TTATACTAAGAGCTGGGAGA+CGG | 0.586602 | 3_1:+76388344 | Msa0376340:CDS |
| TCTCCAACTAGTACACGGAC+AGG | 0.586958 | 3_1:-76388178 | None:intergenic |
| CCTCCTCATTGCCGGAAGGG+CGG | 0.591041 | 3_1:-76388408 | None:intergenic |
| GCAGATGCTTGATAGGAACT+GGG | 0.593828 | 3_1:+76386994 | Msa0376340:intron |
| TGACAAATCAAATATTTCAG+GGG | 0.599665 | 3_1:-76388617 | None:intergenic |
| CTCCAATAAGTCAATGAAGT+GGG | 0.600928 | 3_1:-76387758 | None:intergenic |
| CAATGTCAGAGACGAAGGAA+AGG | 0.601326 | 3_1:-76388243 | None:intergenic |
| GGCGCCTATTGTATTGCACT+GGG | 0.603294 | 3_1:+76388125 | Msa0376340:CDS |
| CACTGCAATGCGTATTAGTG+AGG | 0.603654 | 3_1:+76387488 | Msa0376340:CDS |
| AGAATAGGAGATATTTAGGG+AGG | 0.605436 | 3_1:+76382534 | Msa0376340:five_prime_UTR |
| AAGGTTGCTCGTTCTTCGAG+GGG | 0.606778 | 3_1:+76388669 | Msa0376340:CDS |
| ATAAGCTGTCGCAAACATGA+AGG | 0.607676 | 3_1:-76386827 | None:intergenic |
| TTCATGTGTCCAGAACTGGC+TGG | 0.607798 | 3_1:+76388084 | Msa0376340:intron |
| GATTTGTCAAAGATTGTGTG+TGG | 0.608670 | 3_1:+76388631 | Msa0376340:CDS |
| TAACTTGCCATACCTTTGTG+AGG | 0.609041 | 3_1:-76385400 | None:intergenic |
| GGAGGCAGACGTTGACGCGG+TGG | 0.611176 | 3_1:+76382552 | Msa0376340:five_prime_UTR |
| GGACGAAGAATCTGTTAGGA+AGG | 0.614608 | 3_1:+76384095 | Msa0376340:CDS |
| TATATCTCGTTGCCTGCAAG+TGG | 0.614918 | 3_1:+76383818 | Msa0376340:CDS |
| TCTCCAATAAGTCAATGAAG+TGG | 0.615738 | 3_1:-76387759 | None:intergenic |
| CAGCTTATGATGGAAATCCT+CGG | 0.622225 | 3_1:+76386842 | Msa0376340:CDS |
| GAATCCAATGTCAGAGACGA+AGG | 0.623030 | 3_1:-76388248 | None:intergenic |
| CTCGCCATCTTGGCCCACAA+AGG | 0.624193 | 3_1:-76387425 | None:intergenic |
| GTGGAACTTATGTGGACTCA+AGG | 0.624300 | 3_1:+76388650 | Msa0376340:CDS |
| TGATGGAAACTCCTTGAAAG+GGG | 0.625886 | 3_1:-76388473 | None:intergenic |
| TAATATGCAGTTCTTCACTA+CGG | 0.627898 | 3_1:+76383212 | Msa0376340:CDS |
| CATCTGATAATATCCATCGA+CGG | 0.629067 | 3_1:-76387453 | None:intergenic |
| GTTCAAATCATTCCTCACAA+AGG | 0.633223 | 3_1:+76385388 | Msa0376340:CDS |
| GTCTTGCCCATACAGAGTTG+AGG | 0.635746 | 3_1:+76384344 | Msa0376340:CDS |
| TGATGATTGCATTTGACATG+AGG | 0.640141 | 3_1:+76385221 | Msa0376340:CDS |
| GAATCCTCATCCAAAGCCAA+AGG | 0.640345 | 3_1:+76387786 | Msa0376340:CDS |
| GGCTATCAGAGGTTTGACAA+TGG | 0.644633 | 3_1:+76383045 | Msa0376340:intron |
| GTTGACGCGGTGGAAACCCG+TGG | 0.645850 | 3_1:+76382562 | Msa0376340:five_prime_UTR |
| TTTGCTATAGGCGGATGAGG+TGG | 0.651791 | 3_1:+76383462 | Msa0376340:intron |
| ATTCCGCCCTTCCGGCAATG+AGG | 0.652081 | 3_1:+76388405 | Msa0376340:CDS |
| AGTTGCGTGCTACAGAACGC+CGG | 0.653048 | 3_1:-76382595 | None:intergenic |
| GCCTATTGTATTGCACTGGG+AGG | 0.658776 | 3_1:+76388128 | Msa0376340:CDS |
| ACCATCCTCGCAAAAGTCAG+CGG | 0.660725 | 3_1:-76385158 | None:intergenic |
| ACTATACACTGATATTACAA+AGG | 0.661664 | 3_1:-76389018 | None:intergenic |
| CAAAGCTGGTAAAAGAGGAA+GGG | 0.663205 | 3_1:+76388303 | Msa0376340:CDS |
| GACCTCTTCCGTTTGCATGG+AGG | 0.665410 | 3_1:+76383282 | Msa0376340:CDS |
| TGCAGGCAAGAGAAAGCACA+AGG | 0.672647 | 3_1:+76383189 | Msa0376340:CDS |
| AGTTCCCAAGCTCAGCGTCG+AGG | 0.673683 | 3_1:+76383637 | Msa0376340:CDS |
| TCGATGGATATTATCAGATG+GGG | 0.674719 | 3_1:+76387456 | Msa0376340:CDS |
| TAGGGAGGCAGACGTTGACG+CGG | 0.678964 | 3_1:+76382549 | Msa0376340:five_prime_UTR |
| ACGGACAGGAGGTTGGCGAA+GGG | 0.679588 | 3_1:-76388164 | None:intergenic |
| CCAACTAGTACACGGACAGG+AGG | 0.684433 | 3_1:-76388175 | None:intergenic |
| GATTTCATACCCGTCCACCA+AGG | 0.686883 | 3_1:-76383372 | None:intergenic |
| GCAAATCTCCAACTAGTACA+CGG | 0.688715 | 3_1:-76388183 | None:intergenic |
| CAGATGCTTGATAGGAACTG+GGG | 0.692383 | 3_1:+76386995 | Msa0376340:intron |
| GATTGTCCAGCGAAACGCAG+GGG | 0.700725 | 3_1:-76383160 | None:intergenic |
| TGATTGTCCAGCGAAACGCA+GGG | 0.710536 | 3_1:-76383161 | None:intergenic |
| GCGGAATGAGAGCCTCTCTG+AGG | 0.711146 | 3_1:-76388389 | None:intergenic |
| TTCATTTATCCTAGTCCACG+GGG | 0.719519 | 3_1:+76383850 | Msa0376340:CDS |
| AGCAAGACAATACCTCAGAG+AGG | 0.731039 | 3_1:+76388377 | Msa0376340:CDS |
| CATATGGAGAGTTTCTGCCG+AGG | 0.733805 | 3_1:-76386859 | None:intergenic |
| GTAGGAGAAGACACAACTGG+AGG | 0.772677 | 3_1:+76384117 | Msa0376340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAAAAAAAAAAAAAA+AGG | - | chr3_1:76383021-76383040 | None:intergenic | 0.0% |
| !!! | TTTTTTTTTTTTTTAATATT+TGG | + | chr3_1:76383024-76383043 | Msa0376340:intron | 0.0% |
| !! | AAAAAAAAAAAAAAAAAGGA+TGG | - | chr3_1:76383017-76383036 | None:intergenic | 10.0% |
| !!! | GTTAATATTGTATTTAATTT+TGG | + | chr3_1:76385419-76385438 | Msa0376340:intron | 10.0% |
| !!! | AAAATAAAATAATTTTGAGT+TGG | - | chr3_1:76386042-76386061 | None:intergenic | 10.0% |
| !!! | TGGATTAATTTTTTTAATTC+CGG | + | chr3_1:76383421-76383440 | Msa0376340:intron | 15.0% |
| !!! | TAAAAGTATAACTTTTTAGA+AGG | + | chr3_1:76385455-76385474 | Msa0376340:intron | 15.0% |
| !!! | TCATATTTAATTTATGTTTC+TGG | - | chr3_1:76385927-76385946 | None:intergenic | 15.0% |
| !!! | ATATTTTTGATGTTATCATA+AGG | + | chr3_1:76386125-76386144 | Msa0376340:intron | 15.0% |
| !!! | TATTTTTGATGTTATCATAA+GGG | + | chr3_1:76386126-76386145 | Msa0376340:intron | 15.0% |
| !! | TGAGAATAATACTAAATTAA+TGG | + | chr3_1:76386453-76386472 | Msa0376340:intron | 15.0% |
| !!! | TCATTATTTTATTACATTTC+CGG | + | chr3_1:76386555-76386574 | Msa0376340:intron | 15.0% |
| !! | AATATTTATTATGCTAATAC+CGG | - | chr3_1:76386577-76386596 | None:intergenic | 15.0% |
| !! | AAAAGTTATGAAAACAAAAA+TGG | - | chr3_1:76386953-76386972 | None:intergenic | 15.0% |
| !! | AAAAAAAATCATAAAGAGAA+GGG | + | chr3_1:76387217-76387236 | Msa0376340:intron | 15.0% |
| !! | AACATAATAAGAAAGAGAAT+AGG | + | chr3_1:76382519-76382538 | Msa0376340:five_prime_UTR | 20.0% |
| !! | AATTTATATGTGAATAAGCT+AGG | - | chr3_1:76383114-76383133 | None:intergenic | 20.0% |
| !!! | ATTAATTTTTTTAATTCCGG+TGG | + | chr3_1:76383424-76383443 | Msa0376340:intron | 20.0% |
| !! | AAGAATGATACAAAAGTTTA+CGG | - | chr3_1:76383778-76383797 | None:intergenic | 20.0% |
| !!! | ATTCATTACCTTGATATTTT+GGG | - | chr3_1:76384702-76384721 | None:intergenic | 20.0% |
| !!! | AATTCATTACCTTGATATTT+TGG | - | chr3_1:76384703-76384722 | None:intergenic | 20.0% |
| !!! | TTATACTTTTAAACAGTCAA+GGG | - | chr3_1:76385446-76385465 | None:intergenic | 20.0% |
| !! | GAAAAAGGAACAAATTATTT+AGG | - | chr3_1:76385577-76385596 | None:intergenic | 20.0% |
| !!! | CATTTTAGTGTTATTAATAG+CGG | + | chr3_1:76385622-76385641 | Msa0376340:intron | 20.0% |
| !! | AAAAATCTGATATGAGAAAT+AGG | + | chr3_1:76385668-76385687 | Msa0376340:intron | 20.0% |
| !! | AAAATCTGATATGAGAAATA+GGG | + | chr3_1:76385669-76385688 | Msa0376340:intron | 20.0% |
| !! | ATATATAAACCATCTTACAA+GGG | - | chr3_1:76385894-76385913 | None:intergenic | 20.0% |
| !! | TATATATAAACCATCTTACA+AGG | - | chr3_1:76385895-76385914 | None:intergenic | 20.0% |
| !!! | TCTTCAAATTTTCATGATAA+TGG | - | chr3_1:76386407-76386426 | None:intergenic | 20.0% |
| !! | GGAAATGTAATAAAATAATG+AGG | - | chr3_1:76386556-76386575 | None:intergenic | 20.0% |
| !!! | CTATGATTATCTTTTAGTAT+TGG | - | chr3_1:76386670-76386689 | None:intergenic | 20.0% |
| !! | CAAAAAAAATCATAAAGAGA+AGG | + | chr3_1:76387216-76387235 | Msa0376340:intron | 20.0% |
| !! | CAAATGTAACCTTATTATTA+AGG | - | chr3_1:76387652-76387671 | None:intergenic | 20.0% |
| !!! | ATTAAAATTTGTGACTGTTT+TGG | - | chr3_1:76388034-76388053 | None:intergenic | 20.0% |
| !!! | GTATCAATGTTTTTATCTAA+AGG | - | chr3_1:76388559-76388578 | None:intergenic | 20.0% |
| !! | TTGACAAATCAAATATTTCA+GGG | - | chr3_1:76388621-76388640 | None:intergenic | 20.0% |
| !! | TTTGACAAATCAAATATTTC+AGG | - | chr3_1:76388622-76388641 | None:intergenic | 20.0% |
| ! | AAAGAGAATAGGAGATATTT+AGG | + | chr3_1:76382530-76382549 | Msa0376340:five_prime_UTR | 25.0% |
| ! | AAGAGAATAGGAGATATTTA+GGG | + | chr3_1:76382531-76382550 | Msa0376340:five_prime_UTR | 25.0% |
| ! | TGAATAATATAGGAAGAAGA+AGG | - | chr3_1:76382636-76382655 | None:intergenic | 25.0% |
| !!! | ATGGAGTTGATGAATAATAT+AGG | - | chr3_1:76382646-76382665 | None:intergenic | 25.0% |
| ! | TATCAGAAATGTTAATTCCT+TGG | - | chr3_1:76382783-76382802 | None:intergenic | 25.0% |
| ! | TACTGCAAAACTAAATGTAA+AGG | - | chr3_1:76382958-76382977 | None:intergenic | 25.0% |
| !!! | ATTTAGTTTTGCAGTATTGA+TGG | + | chr3_1:76382962-76382981 | Msa0376340:intron | 25.0% |
| ! | ATTTATCAGCAAATATTCAG+AGG | - | chr3_1:76382990-76383009 | None:intergenic | 25.0% |
| !! | TTTTAATATTTGGCTATCAG+AGG | + | chr3_1:76383034-76383053 | Msa0376340:intron | 25.0% |
| ! | TAACTCTTGTGTTATACAAA+GGG | - | chr3_1:76383600-76383619 | None:intergenic | 25.0% |
| ! | ATAACTCTTGTGTTATACAA+AGG | - | chr3_1:76383601-76383620 | None:intergenic | 25.0% |
| ! | CAACAAAATATTGTGAAAAG+GGG | - | chr3_1:76383724-76383743 | None:intergenic | 25.0% |
| ! | CCAACAAAATATTGTGAAAA+GGG | - | chr3_1:76383725-76383744 | None:intergenic | 25.0% |
| ! | ACCAACAAAATATTGTGAAA+AGG | - | chr3_1:76383726-76383745 | None:intergenic | 25.0% |
| !! | ATATTTTGTTGGTATCTTCA+AGG | + | chr3_1:76383733-76383752 | Msa0376340:intron | 25.0% |
| !!! | GTTTTAACCTTAATGTTTTC+TGG | + | chr3_1:76384215-76384234 | Msa0376340:intron | 25.0% |
| ! | ACAATGGTTTATTTACTTTC+AGG | + | chr3_1:76384300-76384319 | Msa0376340:intron | 25.0% |
| !!! | TCATTTTTCTGTCTTTTATG+TGG | + | chr3_1:76384451-76384470 | Msa0376340:intron | 25.0% |
| ! | GAAAAGAATTATTACAGAGA+TGG | + | chr3_1:76384723-76384742 | Msa0376340:intron | 25.0% |
| ! | TTATTCAGTTAGAAACCATA+TGG | - | chr3_1:76384811-76384830 | None:intergenic | 25.0% |
| ! | ATATGTCATATGTTAGGTAT+CGG | - | chr3_1:76384957-76384976 | None:intergenic | 25.0% |
| !! | GAAAGTATATGTCATATGTT+AGG | - | chr3_1:76384963-76384982 | None:intergenic | 25.0% |
| ! | AACATATGACATATACTTTC+TGG | + | chr3_1:76384963-76384982 | Msa0376340:intron | 25.0% |
| ! | TATAATGGCAAAAATGGTAA+TGG | + | chr3_1:76385334-76385353 | Msa0376340:CDS | 25.0% |
| ! | ATAATGGCAAAAATGGTAAT+GGG | + | chr3_1:76385335-76385354 | Msa0376340:CDS | 25.0% |
| !! | TATACTTTTAAACAGTCAAG+GGG | - | chr3_1:76385445-76385464 | None:intergenic | 25.0% |
| !! | GTTATACTTTTAAACAGTCA+AGG | - | chr3_1:76385447-76385466 | None:intergenic | 25.0% |
| !! | AGCGATTATTTCTTACATAT+CGG | - | chr3_1:76386174-76386193 | None:intergenic | 25.0% |
| !!! | ATGAAGTGTTGTTAAATAAC+CGG | - | chr3_1:76386367-76386386 | None:intergenic | 25.0% |
| ! | ATTCTAACAAATATGTAGAC+AGG | + | chr3_1:76386720-76386739 | Msa0376340:intron | 25.0% |
| ! | ATCTGCGAGAAAATAATATA+AGG | - | chr3_1:76386980-76386999 | None:intergenic | 25.0% |
| ! | TTGCTAGCAATAAAGATAAA+AGG | - | chr3_1:76387033-76387052 | None:intergenic | 25.0% |
| ! | ATCTAATCAAATGCTATTCA+TGG | - | chr3_1:76387314-76387333 | None:intergenic | 25.0% |
| ! | TATTATTAAGGAAAAACTCG+AGG | - | chr3_1:76387640-76387659 | None:intergenic | 25.0% |
| !! | CGAGTTTTTCCTTAATAATA+AGG | + | chr3_1:76387640-76387659 | Msa0376340:intron | 25.0% |
| !! | TTTTACTCATGAATTACCTT+TGG | - | chr3_1:76387805-76387824 | None:intergenic | 25.0% |
| ! | ATTGTAGAAGAAACAATACT+AGG | - | chr3_1:76387846-76387865 | None:intergenic | 25.0% |
| !!! | GTTTTGGTGATTGTTTTAAT+TGG | - | chr3_1:76388018-76388037 | None:intergenic | 25.0% |
| ! | ATGAATAATGGCATATAAGT+TGG | - | chr3_1:76388069-76388088 | None:intergenic | 25.0% |
| !!! | AGAAATTTTCTAGCAAGAAA+TGG | + | chr3_1:76388440-76388459 | Msa0376340:CDS | 25.0% |
| ! | TGACAAATCAAATATTTCAG+GGG | - | chr3_1:76388620-76388639 | None:intergenic | 25.0% |
| ! | TTTTCATTTCAATTTCGCCA+AGG | + | chr3_1:76382763-76382782 | Msa0376340:intron | 30.0% |
| ATTTACATTCACCACATCAA+TGG | - | chr3_1:76382858-76382877 | None:intergenic | 30.0% | |
| CACATATAAATTTGTCGACA+AGG | + | chr3_1:76383122-76383141 | Msa0376340:CDS | 30.0% | |
| TAATATGCAGTTCTTCACTA+CGG | + | chr3_1:76383212-76383231 | Msa0376340:CDS | 30.0% | |
| GTTCAAAATGTCAGACTTTA+AGG | + | chr3_1:76383327-76383346 | Msa0376340:CDS | 30.0% | |
| !! | CATCGATTAAGTTTTGCTAT+AGG | + | chr3_1:76383450-76383469 | Msa0376340:intron | 30.0% |
| ! | CCCTTTTCACAATATTTTGT+TGG | + | chr3_1:76383722-76383741 | Msa0376340:intron | 30.0% |
| ! | AGTGGTTCTTTTTATGCAAA+GGG | - | chr3_1:76383963-76383982 | None:intergenic | 30.0% |
| ! | ACATTTTCCTTTCAGTATCA+TGG | + | chr3_1:76384003-76384022 | Msa0376340:intron | 30.0% |
| TTGATGAGAGATCTTCTAAT+TGG | + | chr3_1:76384177-76384196 | Msa0376340:CDS | 30.0% | |
| ATGTCTTCCAGAAAACATTA+AGG | - | chr3_1:76384225-76384244 | None:intergenic | 30.0% | |
| ! | AGGAGTGATATTTTCTACAA+TGG | + | chr3_1:76384284-76384303 | Msa0376340:intron | 30.0% |
| CTTTGATATGTCTGTCTATT+GGG | - | chr3_1:76384390-76384409 | None:intergenic | 30.0% | |
| ACTTTGATATGTCTGTCTAT+TGG | - | chr3_1:76384391-76384410 | None:intergenic | 30.0% | |
| ! | TGTTGCTAGTTTGAACATTT+CGG | + | chr3_1:76384570-76384589 | Msa0376340:intron | 30.0% |
| ! | CTTATCAGGTTTTCTATCTT+AGG | - | chr3_1:76384623-76384642 | None:intergenic | 30.0% |
| TGATAGAACCCAAAATATCA+AGG | + | chr3_1:76384691-76384710 | Msa0376340:intron | 30.0% | |
| AGTTAGAAACCATATGGTTT+GGG | - | chr3_1:76384805-76384824 | None:intergenic | 30.0% | |
| GGAAAATGACAGTTATATGA+AGG | - | chr3_1:76384865-76384884 | None:intergenic | 30.0% | |
| !! | GTTTGTTATATTTGCTGATG+TGG | - | chr3_1:76384901-76384920 | None:intergenic | 30.0% |
| ! | AACTCTATTTAGCACCTTTT+TGG | + | chr3_1:76384918-76384937 | Msa0376340:intron | 30.0% |
| ! | ACTCTATTTAGCACCTTTTT+GGG | + | chr3_1:76384919-76384938 | Msa0376340:intron | 30.0% |
| TATGTCATATGTTAGGTATC+GGG | - | chr3_1:76384956-76384975 | None:intergenic | 30.0% | |
| !! | AAGATGCATGGGTTTTATAA+TGG | + | chr3_1:76385319-76385338 | Msa0376340:intron | 30.0% |
| !! | GGGTTTTATAATGGCAAAAA+TGG | + | chr3_1:76385328-76385347 | Msa0376340:CDS | 30.0% |
| TTGAACTTTGCGAATATCAA+AGG | - | chr3_1:76385374-76385393 | None:intergenic | 30.0% | |
| AATATGCCTCATACAAACTA+AGG | + | chr3_1:76385551-76385570 | Msa0376340:intron | 30.0% | |
| TATTTATTTCAACCGCTTTG+TGG | - | chr3_1:76385722-76385741 | None:intergenic | 30.0% | |
| ! | CTAATTAACCTCTAACTTGT+AGG | - | chr3_1:76385799-76385818 | None:intergenic | 30.0% |
| !!! | ATAATTTTGAGTTGGTGATG+AGG | - | chr3_1:76386034-76386053 | None:intergenic | 30.0% |
| GCGAAATCACAATAACATAT+CGG | + | chr3_1:76386233-76386252 | Msa0376340:intron | 30.0% | |
| AACAACACTTCATTTATAGC+AGG | + | chr3_1:76386374-76386393 | Msa0376340:intron | 30.0% | |
| AAATTAATGGTTAAGTCACG+TGG | + | chr3_1:76386466-76386485 | Msa0376340:intron | 30.0% | |
| AAGTAAACTACTACAGATCA+TGG | - | chr3_1:76386492-76386511 | None:intergenic | 30.0% | |
| CTGATAATTCAAATTACACG+TGG | + | chr3_1:76386611-76386630 | Msa0376340:intron | 30.0% | |
| GAAACAAGTCACGATATATA+AGG | + | chr3_1:76386633-76386652 | Msa0376340:intron | 30.0% | |
| ATAGTTACCCTAACAAATGT+AGG | + | chr3_1:76386686-76386705 | Msa0376340:intron | 30.0% | |
| ! | CAACATACCTACATTTGTTA+GGG | - | chr3_1:76386696-76386715 | None:intergenic | 30.0% |
| TCAACATACCTACATTTGTT+AGG | - | chr3_1:76386697-76386716 | None:intergenic | 30.0% | |
| AAGATAAACAGCTCAATGTA+GGG | - | chr3_1:76387135-76387154 | None:intergenic | 30.0% | |
| !! | ACCAGCAATTTTTCAATCTT+GGG | - | chr3_1:76387353-76387372 | None:intergenic | 30.0% |
| TGAAATGTTCTACAGTTGTT+TGG | + | chr3_1:76387383-76387402 | Msa0376340:intron | 30.0% | |
| AAATGTCTTATATAAGCACC+AGG | - | chr3_1:76387592-76387611 | None:intergenic | 30.0% | |
| AAGTTCACAATTAATCCAAC+TGG | + | chr3_1:76387992-76388011 | Msa0376340:intron | 30.0% | |
| TAGTAGAGAATCAAAGTTGA+AGG | + | chr3_1:76388216-76388235 | Msa0376340:CDS | 30.0% | |
| TCTTCATTTATACTAAGAGC+TGG | + | chr3_1:76388337-76388356 | Msa0376340:CDS | 30.0% | |
| CTTCATTTATACTAAGAGCT+GGG | + | chr3_1:76388338-76388357 | Msa0376340:CDS | 30.0% | |
| GACAAATCAAATATTTCAGG+GGG | - | chr3_1:76388619-76388638 | None:intergenic | 30.0% | |
| !!! | TGTAGTTTTGTTGTTGCTAT+AGG | + | chr3_1:76388817-76388836 | Msa0376340:three_prime_UTR | 30.0% |
| GCATTTCAGATAACTAAGTT+TGG | - | chr3_1:76388893-76388912 | None:intergenic | 30.0% | |
| !!! | TTTTTTCAAGAAGTCTGTTC+TGG | + | chr3_1:76388913-76388932 | Msa0376340:three_prime_UTR | 30.0% |
| AGAATAGGAGATATTTAGGG+AGG | + | chr3_1:76382534-76382553 | Msa0376340:five_prime_UTR | 35.0% | |
| AGGACATTACTCTCCAAAAT+CGG | - | chr3_1:76383094-76383113 | None:intergenic | 35.0% | |
| !! | GTTTTAGATCGTGTTAGCAT+TGG | + | chr3_1:76383349-76383368 | Msa0376340:CDS | 35.0% |
| !! | CGATTAAGTTTTGCTATAGG+CGG | + | chr3_1:76383453-76383472 | Msa0376340:intron | 35.0% |
| AGATAATTCTTTGTCCGTTC+AGG | + | chr3_1:76383519-76383538 | Msa0376340:intron | 35.0% | |
| AACTCATCATGTAACCTGAA+CGG | - | chr3_1:76383536-76383555 | None:intergenic | 35.0% | |
| !! | TTCAAGGTATTGAAGAAGCT+GGG | + | chr3_1:76383749-76383768 | Msa0376340:intron | 35.0% |
| TCTTACTCAATGCAAGTTCA+TGG | + | chr3_1:76383794-76383813 | Msa0376340:CDS | 35.0% | |
| AAATAGACAACATTCAGAGC+AGG | - | chr3_1:76383928-76383947 | None:intergenic | 35.0% | |
| ! | GTGGTTCTTTTTATGCAAAG+GGG | - | chr3_1:76383962-76383981 | None:intergenic | 35.0% |
| ! | CAGTGGTTCTTTTTATGCAA+AGG | - | chr3_1:76383964-76383983 | None:intergenic | 35.0% |
| ! | AGAACCACTGATGTTCTTTT+TGG | + | chr3_1:76383974-76383993 | Msa0376340:intron | 35.0% |
| AAAACTGCCATGATACTGAA+AGG | - | chr3_1:76384013-76384032 | None:intergenic | 35.0% | |
| !! | AGATTGGCTTCAAACTTTAG+AGG | + | chr3_1:76384059-76384078 | Msa0376340:CDS | 35.0% |
| GTTAATTACCTGCATAGTCA+TGG | + | chr3_1:76384322-76384341 | Msa0376340:CDS | 35.0% | |
| TGATGTACAAAACCTTCTCT+GGG | - | chr3_1:76384505-76384524 | None:intergenic | 35.0% | |
| !!! | ACTTTTGCTCTGGGATTATA+GGG | - | chr3_1:76384753-76384772 | None:intergenic | 35.0% |
| !!! | AACTTTTGCTCTGGGATTAT+AGG | - | chr3_1:76384754-76384773 | None:intergenic | 35.0% |
| AGAGAAATGTCTCTTCTCTA+AGG | - | chr3_1:76384777-76384796 | None:intergenic | 35.0% | |
| CAGTTAGAAACCATATGGTT+TGG | - | chr3_1:76384806-76384825 | None:intergenic | 35.0% | |
| ATGACAGTTATATGAAGGAC+AGG | - | chr3_1:76384860-76384879 | None:intergenic | 35.0% | |
| !!! | TTCTGGTTGATGATTTTCAC+TGG | + | chr3_1:76384980-76384999 | Msa0376340:intron | 35.0% |
| !!! | TCTGGTTGATGATTTTCACT+GGG | + | chr3_1:76384981-76385000 | Msa0376340:intron | 35.0% |
| AGTTACTGTACACCAATAGT+TGG | + | chr3_1:76385045-76385064 | Msa0376340:intron | 35.0% | |
| ! | ACCTGAAGTGTTTACTTAAC+AGG | + | chr3_1:76385117-76385136 | Msa0376340:intron | 35.0% |
| ACCTGTTAAGTAAACACTTC+AGG | - | chr3_1:76385121-76385140 | None:intergenic | 35.0% | |
| ! | GAAGTGTTTACTTAACAGGT+CGG | + | chr3_1:76385121-76385140 | Msa0376340:intron | 35.0% |
| TGATGATTGCATTTGACATG+AGG | + | chr3_1:76385221-76385240 | Msa0376340:CDS | 35.0% | |
| ATTGCATTTGACATGAGGTA+TGG | + | chr3_1:76385226-76385245 | Msa0376340:intron | 35.0% | |
| AACTTCACAAACGATATCCT+AGG | - | chr3_1:76385252-76385271 | None:intergenic | 35.0% | |
| ATCTGTGTTACAAAGATGCA+TGG | + | chr3_1:76385307-76385326 | Msa0376340:intron | 35.0% | |
| TCTGTGTTACAAAGATGCAT+GGG | + | chr3_1:76385308-76385327 | Msa0376340:intron | 35.0% | |
| GTTCAAATCATTCCTCACAA+AGG | + | chr3_1:76385388-76385407 | Msa0376340:CDS | 35.0% | |
| AATCATTCCTCACAAAGGTA+TGG | + | chr3_1:76385393-76385412 | Msa0376340:intron | 35.0% | |
| ! | GTCTATAAAGCATTTGAGTC+AGG | - | chr3_1:76385495-76385514 | None:intergenic | 35.0% |
| AAATGCTTTATAGACCGTGA+AGG | + | chr3_1:76385500-76385519 | Msa0376340:intron | 35.0% | |
| !! | TTTAGGCCTTAGTTTGTATG+AGG | - | chr3_1:76385560-76385579 | None:intergenic | 35.0% |
| !! | TCTAACTTGTAGGCTTTTGA+GGG | - | chr3_1:76385789-76385808 | None:intergenic | 35.0% |
| CAAGTTAGAGGTTAATTAGC+AGG | + | chr3_1:76385800-76385819 | Msa0376340:intron | 35.0% | |
| AACCGATTGTCTTAGATGTA+AGG | + | chr3_1:76385863-76385882 | Msa0376340:intron | 35.0% | |
| ACCGATTGTCTTAGATGTAA+GGG | + | chr3_1:76385864-76385883 | Msa0376340:intron | 35.0% | |
| ! | ACCCTTACATCTAAGACAAT+CGG | - | chr3_1:76385868-76385887 | None:intergenic | 35.0% |
| GAAGTGAAGAGAAAAGATAG+AGG | + | chr3_1:76385952-76385971 | Msa0376340:intron | 35.0% | |
| TTTATATAACCCCACAACCT+AGG | - | chr3_1:76386005-76386024 | None:intergenic | 35.0% | |
| ! | AGCAGTGACTTTTTGCATAT+CGG | - | chr3_1:76386201-76386220 | None:intergenic | 35.0% |
| CAAATTCCGAGATGTAATAG+CGG | + | chr3_1:76386326-76386345 | Msa0376340:intron | 35.0% | |
| ATTTGTAGGTCTACTGTAAG+TGG | + | chr3_1:76386522-76386541 | Msa0376340:intron | 35.0% | |
| TTCTTGCCACATTAAACTTC+AGG | + | chr3_1:76386796-76386815 | Msa0376340:intron | 35.0% | |
| TCTTGCCACATTAAACTTCA+GGG | + | chr3_1:76386797-76386816 | Msa0376340:intron | 35.0% | |
| AGATAAACAGCTCAATGTAG+GGG | - | chr3_1:76387134-76387153 | None:intergenic | 35.0% | |
| CAAGATAAACAGCTCAATGT+AGG | - | chr3_1:76387136-76387155 | None:intergenic | 35.0% | |
| CTACATTGAGCTGTTTATCT+TGG | + | chr3_1:76387134-76387153 | Msa0376340:intron | 35.0% | |
| ! | TCAAGTTTCTTTGGTCTTTC+AGG | + | chr3_1:76387241-76387260 | Msa0376340:intron | 35.0% |
| ACCCAAGATTGAAAAATTGC+TGG | + | chr3_1:76387349-76387368 | Msa0376340:intron | 35.0% | |
| !! | CACCAGCAATTTTTCAATCT+TGG | - | chr3_1:76387354-76387373 | None:intergenic | 35.0% |
| CAACTGTAGAACATTTCACA+TGG | - | chr3_1:76387381-76387400 | None:intergenic | 35.0% | |
| ATCTGATAATATCCATCGAC+GGG | - | chr3_1:76387455-76387474 | None:intergenic | 35.0% | |
| CATCTGATAATATCCATCGA+CGG | - | chr3_1:76387456-76387475 | None:intergenic | 35.0% | |
| GTCGATGGATATTATCAGAT+GGG | + | chr3_1:76387455-76387474 | Msa0376340:CDS | 35.0% | |
| TCGATGGATATTATCAGATG+GGG | + | chr3_1:76387456-76387475 | Msa0376340:CDS | 35.0% | |
| !! | TCTGTTACATTTTGAGTACC+TGG | + | chr3_1:76387571-76387590 | Msa0376340:intron | 35.0% |
| !!! | TTTCTATGTTTTAGCGCAGT+AGG | + | chr3_1:76387731-76387750 | Msa0376340:intron | 35.0% |
| CTCCAATAAGTCAATGAAGT+GGG | - | chr3_1:76387761-76387780 | None:intergenic | 35.0% | |
| TCTCCAATAAGTCAATGAAG+TGG | - | chr3_1:76387762-76387781 | None:intergenic | 35.0% | |
| ! | TCATGAATTACCTTTGGCTT+TGG | - | chr3_1:76387799-76387818 | None:intergenic | 35.0% |
| AAAGAATGGTTTAGGCTCTT+GGG | - | chr3_1:76387923-76387942 | None:intergenic | 35.0% | |
| !!! | GATTGTTTTAATTGGCCAGT+TGG | - | chr3_1:76388010-76388029 | None:intergenic | 35.0% |
| !! | AGTTCTGGACACATGAATAA+TGG | - | chr3_1:76388081-76388100 | None:intergenic | 35.0% |
| ATTATTCATGTGTCCAGAAC+TGG | + | chr3_1:76388080-76388099 | Msa0376340:intron | 35.0% | |
| ATTGGATTCTCAGTCATGAT+TGG | + | chr3_1:76388262-76388281 | Msa0376340:CDS | 35.0% | |
| GAGAAAAATAACCCCTTTCA+AGG | + | chr3_1:76388462-76388481 | Msa0376340:CDS | 35.0% | |
| TTGATGGAAACTCCTTGAAA+GGG | - | chr3_1:76388477-76388496 | None:intergenic | 35.0% | |
| GATTTGTCAAAGATTGTGTG+TGG | + | chr3_1:76388631-76388650 | Msa0376340:CDS | 35.0% | |
| CCACAAAAGACCTTGTAAAT+AGG | - | chr3_1:76388711-76388730 | None:intergenic | 35.0% | |
| ! | CCTATTTACAAGGTCTTTTG+TGG | + | chr3_1:76388708-76388727 | Msa0376340:CDS | 35.0% |
| ! | ATTTACATGAAAGTGTGCTC+TGG | - | chr3_1:76388851-76388870 | None:intergenic | 35.0% |
| !!! | GGAACTGTAGGCATTTTTTT+TGG | + | chr3_1:76388939-76388958 | Msa0376340:three_prime_UTR | 35.0% |
| !!! | CTGTAGGCATTTTTTTTGGA+TGG | + | chr3_1:76388943-76388962 | Msa0376340:three_prime_UTR | 35.0% |
| !! | GAAGAGTATTGGATGGAACA+TGG | - | chr3_1:76382665-76382684 | None:intergenic | 40.0% |
| !! | AAGGGAAGAAGAGTATTGGA+TGG | - | chr3_1:76382672-76382691 | None:intergenic | 40.0% |
| ! | GAGAAAGGGAAGAAGAGTAT+TGG | - | chr3_1:76382676-76382695 | None:intergenic | 40.0% |
| TCTTCTTCCCTTTCTCATTC+TGG | + | chr3_1:76382680-76382699 | Msa0376340:five_prime_UTR | 40.0% | |
| ACCAGAACCAGAATGAGAAA+GGG | - | chr3_1:76382690-76382709 | None:intergenic | 40.0% | |
| ACAATGGCACTTTGTAGAAC+TGG | + | chr3_1:76383061-76383080 | Msa0376340:exon | 40.0% | |
| CAATGGCACTTTGTAGAACT+GGG | + | chr3_1:76383062-76383081 | Msa0376340:exon | 40.0% | |
| TTACTCTCCAAAATCGGGTA+TGG | - | chr3_1:76383088-76383107 | None:intergenic | 40.0% | |
| GGACATTACTCTCCAAAATC+GGG | - | chr3_1:76383093-76383112 | None:intergenic | 40.0% | |
| ATCTGCATCTGCTTCTTCAA+TGG | + | chr3_1:76383237-76383256 | Msa0376340:CDS | 40.0% | |
| AGGAAACGGATCATGTTATG+AGG | + | chr3_1:76383305-76383324 | Msa0376340:CDS | 40.0% | |
| ACTTTACGATGTGTCATGAC+TGG | + | chr3_1:76383401-76383420 | Msa0376340:intron | 40.0% | |
| AACTTAATCGATGAGACCAC+CGG | - | chr3_1:76383443-76383462 | None:intergenic | 40.0% | |
| !! | CTTCAAGGTATTGAAGAAGC+TGG | + | chr3_1:76383748-76383767 | Msa0376340:intron | 40.0% |
| GGTTCATTTATCCTAGTCCA+CGG | + | chr3_1:76383848-76383867 | Msa0376340:CDS | 40.0% | |
| GTTCATTTATCCTAGTCCAC+GGG | + | chr3_1:76383849-76383868 | Msa0376340:CDS | 40.0% | |
| TTCATTTATCCTAGTCCACG+GGG | + | chr3_1:76383850-76383869 | Msa0376340:CDS | 40.0% | |
| TGAGCCAAAAAGAACATCAG+TGG | - | chr3_1:76383981-76384000 | None:intergenic | 40.0% | |
| !!! | GCAGTTTTTCTTTGAGACAC+TGG | + | chr3_1:76384025-76384044 | Msa0376340:CDS | 40.0% |
| GAAGAATCTGTTAGGAAGGT+AGG | + | chr3_1:76384099-76384118 | Msa0376340:CDS | 40.0% | |
| TCGCAATTGCCTAGAAATTG+CGG | - | chr3_1:76384145-76384164 | None:intergenic | 40.0% | |
| TGCAAGTATTCAAGCACTTG+TGG | - | chr3_1:76384254-76384273 | None:intergenic | 40.0% | |
| AATACTTGCACAGCAACATG+AGG | + | chr3_1:76384264-76384283 | Msa0376340:intron | 40.0% | |
| ! | TCTGTCTTTTATGTGGAGTG+TGG | + | chr3_1:76384458-76384477 | Msa0376340:intron | 40.0% |
| GTGATGTACAAAACCTTCTC+TGG | - | chr3_1:76384506-76384525 | None:intergenic | 40.0% | |
| AGTCTGTTGCACTTCTTATC+AGG | - | chr3_1:76384637-76384656 | None:intergenic | 40.0% | |
| ! | TAAGAAGTGCAACAGACTGT+AGG | + | chr3_1:76384639-76384658 | Msa0376340:intron | 40.0% |
| !! | CTCTAAGGAACTTTTGCTCT+GGG | - | chr3_1:76384762-76384781 | None:intergenic | 40.0% |
| !! | TCTCTAAGGAACTTTTGCTC+TGG | - | chr3_1:76384763-76384782 | None:intergenic | 40.0% |
| !! | TTTAGCACCTTTTTGGGCTT+AGG | + | chr3_1:76384925-76384944 | Msa0376340:intron | 40.0% |
| CATGAGGAAACACCAACTAT+TGG | - | chr3_1:76385060-76385079 | None:intergenic | 40.0% | |
| TCAACCTTTCTTCTCATGCT+TGG | + | chr3_1:76385090-76385109 | Msa0376340:intron | 40.0% | |
| CAAACCAAGCATGAGAAGAA+AGG | - | chr3_1:76385097-76385116 | None:intergenic | 40.0% | |
| TGGTTCAAATAGAGGCTCTA+TGG | + | chr3_1:76385177-76385196 | Msa0376340:CDS | 40.0% | |
| TAGAGGCTCTATGGAAAACA+TGG | + | chr3_1:76385186-76385205 | Msa0376340:CDS | 40.0% | |
| !! | AATGGTAATGGGAGAGCTTA+TGG | + | chr3_1:76385346-76385365 | Msa0376340:CDS | 40.0% |
| ! | TAACTTGCCATACCTTTGTG+AGG | - | chr3_1:76385403-76385422 | None:intergenic | 40.0% |
| GAGGCATATTAGAGACAAGA+AGG | - | chr3_1:76385541-76385560 | None:intergenic | 40.0% | |
| TACTCACAGCTTACAGCAAA+GGG | - | chr3_1:76385600-76385619 | None:intergenic | 40.0% | |
| ATACTCACAGCTTACAGCAA+AGG | - | chr3_1:76385601-76385620 | None:intergenic | 40.0% | |
| !! | GTGTTATTAATAGCGGATCG+CGG | + | chr3_1:76385629-76385648 | Msa0376340:intron | 40.0% |
| AAATAGCAGTAGCCACAAAG+CGG | + | chr3_1:76385707-76385726 | Msa0376340:intron | 40.0% | |
| !! | CTCTAACTTGTAGGCTTTTG+AGG | - | chr3_1:76385790-76385809 | None:intergenic | 40.0% |
| CTCAAAAGCCTACAAGTTAG+AGG | + | chr3_1:76385788-76385807 | Msa0376340:intron | 40.0% | |
| AAGAGAAAAGATAGAGGCAG+AGG | + | chr3_1:76385958-76385977 | Msa0376340:intron | 40.0% | |
| TTAGTGATGAGAGGTTACCT+AGG | + | chr3_1:76385985-76386004 | Msa0376340:intron | 40.0% | |
| AAAAGTCACTGCTATTGCAG+TGG | + | chr3_1:76386208-76386227 | Msa0376340:intron | 40.0% | |
| CAAATCCCGAGATGTAATAG+CGG | + | chr3_1:76386274-76386293 | Msa0376340:intron | 40.0% | |
| CTATACCGCTATTACATCTC+GGG | - | chr3_1:76386282-76386301 | None:intergenic | 40.0% | |
| CCTATACCGCTATTACATCT+CGG | - | chr3_1:76386283-76386302 | None:intergenic | 40.0% | |
| CGAGATGTAATAGCGGTATA+GGG | + | chr3_1:76386281-76386300 | Msa0376340:intron | 40.0% | |
| GAGATGTAATAGCGGTATAG+GGG | + | chr3_1:76386282-76386301 | Msa0376340:intron | 40.0% | |
| CCTATACCGCTATTACATCT+CGG | - | chr3_1:76386283-76386302 | None:intergenic | 40.0% | |
| CGAGATGTAATAGCGGTATA+GGG | + | chr3_1:76386281-76386300 | Msa0376340:intron | 40.0% | |
| GAGATGTAATAGCGGTATAG+GGG | + | chr3_1:76386282-76386301 | Msa0376340:intron | 40.0% | |
| GGTGTACTTCAAACGTAAGT+CGG | + | chr3_1:76386741-76386760 | Msa0376340:intron | 40.0% | |
| GTGTACTTCAAACGTAAGTC+GGG | + | chr3_1:76386742-76386761 | Msa0376340:intron | 40.0% | |
| CTTGCCACATTAAACTTCAG+GGG | + | chr3_1:76386798-76386817 | Msa0376340:intron | 40.0% | |
| CATTCCCCTGAAGTTTAATG+TGG | - | chr3_1:76386805-76386824 | None:intergenic | 40.0% | |
| ATAAGCTGTCGCAAACATGA+AGG | - | chr3_1:76386830-76386849 | None:intergenic | 40.0% | |
| ATGTTTGCGACAGCTTATGA+TGG | + | chr3_1:76386832-76386851 | Msa0376340:CDS | 40.0% | |
| ! | CAGCTTATGATGGAAATCCT+CGG | + | chr3_1:76386842-76386861 | Msa0376340:CDS | 40.0% |
| AACTCTCCATATGGAAATGC+TGG | + | chr3_1:76386869-76386888 | Msa0376340:CDS | 40.0% | |
| TGTAAGCCAGCATTTCCATA+TGG | - | chr3_1:76386878-76386897 | None:intergenic | 40.0% | |
| ! | TTTTCTCGCAGATGCTTGAT+AGG | + | chr3_1:76386987-76387006 | Msa0376340:intron | 40.0% |
| ! | GAGAAGGGTTCAAGTTTCTT+TGG | + | chr3_1:76387232-76387251 | Msa0376340:intron | 40.0% |
| ! | AGTTTCTTTGGTCTTTCAGG+AGG | + | chr3_1:76387244-76387263 | Msa0376340:intron | 40.0% |
| ACAGTTGTTTGGATGCTCTA+AGG | + | chr3_1:76387394-76387413 | Msa0376340:intron | 40.0% | |
| CGTCGATGGATATTATCAGA+TGG | + | chr3_1:76387454-76387473 | Msa0376340:CDS | 40.0% | |
| GATATTATCAGATGGGGTCT+AGG | + | chr3_1:76387462-76387481 | Msa0376340:CDS | 40.0% | |
| TGTCCTTAGATGAATACCTG+AGG | - | chr3_1:76387531-76387550 | None:intergenic | 40.0% | |
| CAGAAACACATTGCGTGTAT+GGG | - | chr3_1:76387555-76387574 | None:intergenic | 40.0% | |
| ACAGAAACACATTGCGTGTA+TGG | - | chr3_1:76387556-76387575 | None:intergenic | 40.0% | |
| !! | TGCCCACTTCATTGACTTAT+TGG | + | chr3_1:76387756-76387775 | Msa0376340:CDS | 40.0% |
| !! | ATTACCTTTGGCTTTGGATG+AGG | - | chr3_1:76387793-76387812 | None:intergenic | 40.0% |
| GAAAGAATGGTTTAGGCTCT+TGG | - | chr3_1:76387924-76387943 | None:intergenic | 40.0% | |
| AGCCTAAACCATTCTTTCCA+TGG | + | chr3_1:76387926-76387945 | Msa0376340:intron | 40.0% | |
| AGCCATGGAAAGAATGGTTT+AGG | - | chr3_1:76387931-76387950 | None:intergenic | 40.0% | |
| ATTGACAGCCATGGAAAGAA+TGG | - | chr3_1:76387937-76387956 | None:intergenic | 40.0% | |
| GCAAATCTCCAACTAGTACA+CGG | - | chr3_1:76388186-76388205 | None:intergenic | 40.0% | |
| ! | ATTCTCAGTCATGATTGGTC+AGG | + | chr3_1:76388267-76388286 | Msa0376340:CDS | 40.0% |
| !! | CTTTTACCAGCTTTGTCATG+AGG | - | chr3_1:76388298-76388317 | None:intergenic | 40.0% |
| CATGACAAAGCTGGTAAAAG+AGG | + | chr3_1:76388298-76388317 | Msa0376340:CDS | 40.0% | |
| ACAAAGCTGGTAAAAGAGGA+AGG | + | chr3_1:76388302-76388321 | Msa0376340:CDS | 40.0% | |
| CAAAGCTGGTAAAAGAGGAA+GGG | + | chr3_1:76388303-76388322 | Msa0376340:CDS | 40.0% | |
| TTATACTAAGAGCTGGGAGA+CGG | + | chr3_1:76388344-76388363 | Msa0376340:CDS | 40.0% | |
| TGATGGAAACTCCTTGAAAG+GGG | - | chr3_1:76388476-76388495 | None:intergenic | 40.0% | |
| CTTGATGGAAACTCCTTGAA+AGG | - | chr3_1:76388478-76388497 | None:intergenic | 40.0% | |
| GATTGTGTGTGGAACTTATG+TGG | + | chr3_1:76388642-76388661 | Msa0376340:CDS | 40.0% | |
| GATCAGCTCTCCTATTTACA+AGG | + | chr3_1:76388698-76388717 | Msa0376340:CDS | 40.0% | |
| ! | TCAAGAAGTCTGTTCTGGTT+AGG | + | chr3_1:76388918-76388937 | Msa0376340:three_prime_UTR | 40.0% |
| !! | TCCCTTTCTCATTCTGGTTC+TGG | + | chr3_1:76382686-76382705 | Msa0376340:five_prime_UTR | 45.0% |
| CACCAGAACCAGAATGAGAA+AGG | - | chr3_1:76382691-76382710 | None:intergenic | 45.0% | |
| CTCTGTATGCACCATTGATG+TGG | + | chr3_1:76382844-76382863 | Msa0376340:intron | 45.0% | |
| GGCTATCAGAGGTTTGACAA+TGG | + | chr3_1:76383045-76383064 | Msa0376340:intron | 45.0% | |
| GCTGGACAATCATCAAATGC+AGG | + | chr3_1:76383172-76383191 | Msa0376340:CDS | 45.0% | |
| TTCAATGGAGTCGCATGAAG+AGG | + | chr3_1:76383252-76383271 | Msa0376340:CDS | 45.0% | |
| ATGCAAACGGAAGAGGTCTT+TGG | - | chr3_1:76383280-76383299 | None:intergenic | 45.0% | |
| AAAGACCTCTTCCGTTTGCA+TGG | + | chr3_1:76383279-76383298 | Msa0376340:CDS | 45.0% | |
| !! | AGTTTTGCTATAGGCGGATG+AGG | + | chr3_1:76383459-76383478 | Msa0376340:intron | 45.0% |
| GGTGTTTGAAGGCAAGGTTA+AGG | + | chr3_1:76383483-76383502 | Msa0376340:CDS | 45.0% | |
| GCAAGGTTAAGGACAGTGTT+AGG | + | chr3_1:76383494-76383513 | Msa0376340:CDS | 45.0% | |
| TCGAGGAAAACGAGCAATAG+AGG | + | chr3_1:76383654-76383673 | Msa0376340:CDS | 45.0% | |
| TATATCTCGTTGCCTGCAAG+TGG | + | chr3_1:76383818-76383837 | Msa0376340:CDS | 45.0% | |
| ! | ACTGGCTTCAACAGTCAGAT+TGG | + | chr3_1:76384043-76384062 | Msa0376340:CDS | 45.0% |
| CACTGGACGAAGAATCTGTT+AGG | + | chr3_1:76384091-76384110 | Msa0376340:CDS | 45.0% | |
| GGACGAAGAATCTGTTAGGA+AGG | + | chr3_1:76384095-76384114 | Msa0376340:CDS | 45.0% | |
| AAGGTAGGAGAAGACACAAC+TGG | + | chr3_1:76384114-76384133 | Msa0376340:CDS | 45.0% | |
| CGCAATTGCCTAGAAATTGC+GGG | - | chr3_1:76384144-76384163 | None:intergenic | 45.0% | |
| TTCCAGCCTCAACTCTGTAT+GGG | - | chr3_1:76384353-76384372 | None:intergenic | 45.0% | |
| TTTCCAGCCTCAACTCTGTA+TGG | - | chr3_1:76384354-76384373 | None:intergenic | 45.0% | |
| AAGTGCAACAGACTGTAGGA+AGG | + | chr3_1:76384643-76384662 | Msa0376340:intron | 45.0% | |
| AGTGCAACAGACTGTAGGAA+GGG | + | chr3_1:76384644-76384663 | Msa0376340:intron | 45.0% | |
| AGGACAGGTGTAGCAAAAGA+AGG | - | chr3_1:76384845-76384864 | None:intergenic | 45.0% | |
| !! | TGATGTGGCTAGTTTCTTGG+AGG | - | chr3_1:76384886-76384905 | None:intergenic | 45.0% |
| !! | TGCTGATGTGGCTAGTTTCT+TGG | - | chr3_1:76384889-76384908 | None:intergenic | 45.0% |
| !! | CATATGTTAGGTATCGGGCT+AGG | - | chr3_1:76384951-76384970 | None:intergenic | 45.0% |
| CATGAGAAGAAAGGTTGACC+AGG | - | chr3_1:76385088-76385107 | None:intergenic | 45.0% | |
| TACTTAACAGGTCGGTACAC+TGG | + | chr3_1:76385129-76385148 | Msa0376340:intron | 45.0% | |
| ACTTAACAGGTCGGTACACT+GGG | + | chr3_1:76385130-76385149 | Msa0376340:intron | 45.0% | |
| TGCGAGGATGGTTCAAATAG+AGG | + | chr3_1:76385169-76385188 | Msa0376340:CDS | 45.0% | |
| GCTCTATGGAAAACATGGAC+AGG | + | chr3_1:76385191-76385210 | Msa0376340:CDS | 45.0% | |
| TTTGACATGAGGTATGGCCT+AGG | + | chr3_1:76385232-76385251 | Msa0376340:intron | 45.0% | |
| GCTTACAGCAAAGGGGAAAA+AGG | - | chr3_1:76385592-76385611 | None:intergenic | 45.0% | |
| ACTCACAGCTTACAGCAAAG+GGG | - | chr3_1:76385599-76385618 | None:intergenic | 45.0% | |
| AAGGGTCAACCCTTGTAAGA+TGG | + | chr3_1:76385882-76385901 | Msa0376340:intron | 45.0% | |
| AGAAAAGATAGAGGCAGAGG+CGG | + | chr3_1:76385961-76385980 | Msa0376340:intron | 45.0% | |
| ATGAGAGGTTACCTAGGTTG+TGG | + | chr3_1:76385991-76386010 | Msa0376340:intron | 45.0% | |
| TGAGAGGTTACCTAGGTTGT+GGG | + | chr3_1:76385992-76386011 | Msa0376340:intron | 45.0% | |
| !! | TTTGAGTTGGTGATGAGGTG+AGG | - | chr3_1:76386029-76386048 | None:intergenic | 45.0% |
| CGCTATTACATCTCGGGATT+TGG | - | chr3_1:76386276-76386295 | None:intergenic | 45.0% | |
| CCGAGATGTAATAGCGGTAT+AGG | + | chr3_1:76386280-76386299 | Msa0376340:intron | 45.0% | |
| CCGAGATGTAATAGCGGTAT+AGG | + | chr3_1:76386280-76386299 | Msa0376340:intron | 45.0% | |
| CTACGCATCTTCAGTGAAAG+TGG | + | chr3_1:76386911-76386930 | Msa0376340:intron | 45.0% | |
| GCAGATGCTTGATAGGAACT+GGG | + | chr3_1:76386994-76387013 | Msa0376340:intron | 45.0% | |
| CAGATGCTTGATAGGAACTG+GGG | + | chr3_1:76386995-76387014 | Msa0376340:intron | 45.0% | |
| TGCTAGCAACCAAACCTTCT+CGG | + | chr3_1:76387044-76387063 | Msa0376340:CDS | 45.0% | |
| CCTTATTCTCCGAGAAGGTT+TGG | - | chr3_1:76387056-76387075 | None:intergenic | 45.0% | |
| CCAAACCTTCTCGGAGAATA+AGG | + | chr3_1:76387053-76387072 | Msa0376340:CDS | 45.0% | |
| GCATACCTTATTCTCCGAGA+AGG | - | chr3_1:76387061-76387080 | None:intergenic | 45.0% | |
| ! | TAAGGCACCCATTCCTTTGT+GGG | + | chr3_1:76387412-76387431 | Msa0376340:CDS | 45.0% |
| ATCTTGGCCCACAAAGGAAT+GGG | - | chr3_1:76387422-76387441 | None:intergenic | 45.0% | |
| CACTGCAATGCGTATTAGTG+AGG | + | chr3_1:76387488-76387507 | Msa0376340:CDS | 45.0% | |
| GTACATTTATCGTCAGCCTC+AGG | + | chr3_1:76387512-76387531 | Msa0376340:CDS | 45.0% | |
| CAGCCTCAGGTATTCATCTA+AGG | + | chr3_1:76387525-76387544 | Msa0376340:intron | 45.0% | |
| TATGCATAGCGTTCGACTGA+TGG | + | chr3_1:76387704-76387723 | Msa0376340:intron | 45.0% | |
| ATGCATAGCGTTCGACTGAT+GGG | + | chr3_1:76387705-76387724 | Msa0376340:intron | 45.0% | |
| GAATCCTCATCCAAAGCCAA+AGG | + | chr3_1:76387786-76387805 | Msa0376340:CDS | 45.0% | |
| GTCTTGTAGATTGACAGCCA+TGG | - | chr3_1:76387946-76387965 | None:intergenic | 45.0% | |
| !! | TACAATAGGCGCCATTTTCC+TGG | - | chr3_1:76388118-76388137 | None:intergenic | 45.0% |
| CAATGTCAGAGACGAAGGAA+AGG | - | chr3_1:76388246-76388265 | None:intergenic | 45.0% | |
| CTTTCCTTCGTCTCTGACAT+TGG | + | chr3_1:76388244-76388263 | Msa0376340:CDS | 45.0% | |
| GAATCCAATGTCAGAGACGA+AGG | - | chr3_1:76388251-76388270 | None:intergenic | 45.0% | |
| AGCAAGACAATACCTCAGAG+AGG | + | chr3_1:76388377-76388396 | Msa0376340:CDS | 45.0% | |
| AATATCACCCGACGCAAACT+TGG | - | chr3_1:76388512-76388531 | None:intergenic | 45.0% | |
| GTGGAACTTATGTGGACTCA+AGG | + | chr3_1:76388650-76388669 | Msa0376340:CDS | 45.0% | |
| ! | CTGTTCTGGTTAGGAACTGT+AGG | + | chr3_1:76388927-76388946 | Msa0376340:three_prime_UTR | 45.0% |
| ! | AACTGGGCCATACCCGATTT+TGG | + | chr3_1:76383078-76383097 | Msa0376340:CDS | 50.0% |
| TGATTGTCCAGCGAAACGCA+GGG | - | chr3_1:76383164-76383183 | None:intergenic | 50.0% | |
| ATGATTGTCCAGCGAAACGC+AGG | - | chr3_1:76383165-76383184 | None:intergenic | 50.0% | |
| ! | TGCAGGCAAGAGAAAGCACA+AGG | + | chr3_1:76383189-76383208 | Msa0376340:CDS | 50.0% |
| CGTTTCCTCCTCCATGCAAA+CGG | - | chr3_1:76383293-76383312 | None:intergenic | 50.0% | |
| CGTTTGCATGGAGGAGGAAA+CGG | + | chr3_1:76383291-76383310 | Msa0376340:CDS | 50.0% | |
| !! | GATCGTGTTAGCATTGGCCT+TGG | + | chr3_1:76383355-76383374 | Msa0376340:CDS | 50.0% |
| !! | TTAGCATTGGCCTTGGTGGA+CGG | + | chr3_1:76383362-76383381 | Msa0376340:CDS | 50.0% |
| GATTTCATACCCGTCCACCA+AGG | - | chr3_1:76383375-76383394 | None:intergenic | 50.0% | |
| ! | TTTGCTATAGGCGGATGAGG+TGG | + | chr3_1:76383462-76383481 | Msa0376340:intron | 50.0% |
| TGAGGTGGTGTTTGAAGGCA+AGG | + | chr3_1:76383477-76383496 | Msa0376340:CDS | 50.0% | |
| ! | TTTTCCTCGACGCTGAGCTT+GGG | - | chr3_1:76383644-76383663 | None:intergenic | 50.0% |
| AGATACATACCCCGTGGACT+AGG | - | chr3_1:76383862-76383881 | None:intergenic | 50.0% | |
| ACACTGAGATACATACCCCG+TGG | - | chr3_1:76383868-76383887 | None:intergenic | 50.0% | |
| TTTAGAGGCCACTCTTGCAC+TGG | + | chr3_1:76384074-76384093 | Msa0376340:CDS | 50.0% | |
| TTCTTCGTCCAGTGCAAGAG+TGG | - | chr3_1:76384085-76384104 | None:intergenic | 50.0% | |
| GTAGGAGAAGACACAACTGG+AGG | + | chr3_1:76384117-76384136 | Msa0376340:CDS | 50.0% | |
| GTCTTGCCCATACAGAGTTG+AGG | + | chr3_1:76384344-76384363 | Msa0376340:CDS | 50.0% | |
| ! | GTGGAGTGTGGATTACCTTG+CGG | + | chr3_1:76384470-76384489 | Msa0376340:intron | 50.0% |
| ! | AGTGTGGATTACCTTGCGGT+TGG | + | chr3_1:76384474-76384493 | Msa0376340:intron | 50.0% |
| CTCTCTCTGCCCAAACCATA+TGG | + | chr3_1:76384793-76384812 | Msa0376340:intron | 50.0% | |
| GTGTTTCCTCATGCATAGCC+TGG | + | chr3_1:76385067-76385086 | Msa0376340:intron | 50.0% | |
| !!! | AAATGCCGCTGACTTTTGCG+AGG | + | chr3_1:76385153-76385172 | Msa0376340:CDS | 50.0% |
| ACCATCCTCGCAAAAGTCAG+CGG | - | chr3_1:76385161-76385180 | None:intergenic | 50.0% | |
| !! | AGAGACAAGAAGGCGTCCTT+GGG | - | chr3_1:76385531-76385550 | None:intergenic | 50.0% |
| !! | TAGAGACAAGAAGGCGTCCT+TGG | - | chr3_1:76385532-76385551 | None:intergenic | 50.0% |
| CAGGAGCTGCACATCTGTTA+GGG | + | chr3_1:76385819-76385838 | Msa0376340:intron | 50.0% | |
| AGAGGCGGTTTAGTGATGAG+AGG | + | chr3_1:76385976-76385995 | Msa0376340:intron | 50.0% | |
| GAGAGGTTACCTAGGTTGTG+GGG | + | chr3_1:76385993-76386012 | Msa0376340:intron | 50.0% | |
| !! | AGCGGTATAGGGGCACTATA+CGG | + | chr3_1:76386292-76386311 | Msa0376340:intron | 50.0% |
| CATATGGAGAGTTTCTGCCG+AGG | - | chr3_1:76386862-76386881 | None:intergenic | 50.0% | |
| CTCGGCAGAAACTCTCCATA+TGG | + | chr3_1:76386860-76386879 | Msa0376340:CDS | 50.0% | |
| CGCAGATGCTTGATAGGAAC+TGG | + | chr3_1:76386993-76387012 | Msa0376340:intron | 50.0% | |
| ! | CTAAGGCACCCATTCCTTTG+TGG | + | chr3_1:76387411-76387430 | Msa0376340:CDS | 50.0% |
| CATCTTGGCCCACAAAGGAA+TGG | - | chr3_1:76387423-76387442 | None:intergenic | 50.0% | |
| CATTCCTTTGTGGGCCAAGA+TGG | + | chr3_1:76387421-76387440 | Msa0376340:CDS | 50.0% | |
| TTCATGTGTCCAGAACTGGC+TGG | + | chr3_1:76388084-76388103 | Msa0376340:intron | 50.0% | |
| TGGAGCTGCTTCCAGGAAAA+TGG | + | chr3_1:76388104-76388123 | Msa0376340:CDS | 50.0% | |
| TGGCGCCTATTGTATTGCAC+TGG | + | chr3_1:76388124-76388143 | Msa0376340:CDS | 50.0% | |
| GGCGCCTATTGTATTGCACT+GGG | + | chr3_1:76388125-76388144 | Msa0376340:CDS | 50.0% | |
| GCCTATTGTATTGCACTGGG+AGG | + | chr3_1:76388128-76388147 | Msa0376340:CDS | 50.0% | |
| GCCTCCCAGTGCAATACAAT+AGG | - | chr3_1:76388132-76388151 | None:intergenic | 50.0% | |
| ! | TATTGCACTGGGAGGCATGT+TGG | + | chr3_1:76388136-76388155 | Msa0376340:CDS | 50.0% |
| ! | ATTGCACTGGGAGGCATGTT+GGG | + | chr3_1:76388137-76388156 | Msa0376340:CDS | 50.0% |
| TCTCCAACTAGTACACGGAC+AGG | - | chr3_1:76388181-76388200 | None:intergenic | 50.0% | |
| GTCAGAGACGAAGGAAAGGT+TGG | - | chr3_1:76388242-76388261 | None:intergenic | 50.0% | |
| ! | CAGTCATGATTGGTCAGGAC+TGG | + | chr3_1:76388272-76388291 | Msa0376340:CDS | 50.0% |
| ! | TGGTAAAAGAGGAAGGGTGC+AGG | + | chr3_1:76388309-76388328 | Msa0376340:CDS | 50.0% |
| AGCTAAAGCCTCCTCATTGC+CGG | - | chr3_1:76388419-76388438 | None:intergenic | 50.0% | |
| TCAAGGTTGCTCGTTCTTCG+AGG | + | chr3_1:76388667-76388686 | Msa0376340:CDS | 50.0% | |
| CAAGGTTGCTCGTTCTTCGA+GGG | + | chr3_1:76388668-76388687 | Msa0376340:CDS | 50.0% | |
| AAGGTTGCTCGTTCTTCGAG+GGG | + | chr3_1:76388669-76388688 | Msa0376340:CDS | 50.0% | |
| CTCGTTCTTCGAGGGGTTAA+TGG | + | chr3_1:76388676-76388695 | Msa0376340:CDS | 50.0% | |
| AACCCGTGGCAAAACGTTCC+CGG | + | chr3_1:76382576-76382595 | Msa0376340:five_prime_UTR | 55.0% | |
| AGTTGCGTGCTACAGAACGC+CGG | - | chr3_1:76382598-76382617 | None:intergenic | 55.0% | |
| GATTGTCCAGCGAAACGCAG+GGG | - | chr3_1:76383163-76383182 | None:intergenic | 55.0% | |
| GACCTCTTCCGTTTGCATGG+AGG | + | chr3_1:76383282-76383301 | Msa0376340:CDS | 55.0% | |
| CTCCTCCATGCAAACGGAAG+AGG | - | chr3_1:76383287-76383306 | None:intergenic | 55.0% | |
| CTCTTCCGTTTGCATGGAGG+AGG | + | chr3_1:76383285-76383304 | Msa0376340:CDS | 55.0% | |
| !! | CGTGTTAGCATTGGCCTTGG+TGG | + | chr3_1:76383358-76383377 | Msa0376340:CDS | 55.0% |
| !! | TAGCATTGGCCTTGGTGGAC+GGG | + | chr3_1:76383363-76383382 | Msa0376340:CDS | 55.0% |
| GCGGATGAGGTGGTGTTTGA+AGG | + | chr3_1:76383472-76383491 | Msa0376340:CDS | 55.0% | |
| ! | GTTTTCCTCGACGCTGAGCT+TGG | - | chr3_1:76383645-76383664 | None:intergenic | 55.0% |
| ATCTCGTTGCCTGCAAGTGG+TGG | + | chr3_1:76383821-76383840 | Msa0376340:CDS | 55.0% | |
| TTGCCTGCAAGTGGTGGTAG+TGG | + | chr3_1:76383827-76383846 | Msa0376340:CDS | 55.0% | |
| GAACCACTACCACCACTTGC+AGG | - | chr3_1:76383833-76383852 | None:intergenic | 55.0% | |
| CTGGAGGTCCCGCAATTTCT+AGG | + | chr3_1:76384133-76384152 | Msa0376340:CDS | 55.0% | |
| GGGCAAGACCATGACTATGC+AGG | - | chr3_1:76384333-76384352 | None:intergenic | 55.0% | |
| TGCCCATACAGAGTTGAGGC+TGG | + | chr3_1:76384348-76384367 | Msa0376340:CDS | 55.0% | |
| GGCTAGGCCTAAGCCCAAAA+AGG | - | chr3_1:76384935-76384954 | None:intergenic | 55.0% | |
| GGTTGACCAGGCTATGCATG+AGG | - | chr3_1:76385076-76385095 | None:intergenic | 55.0% | |
| GTCCTTGGGCACTTCCTTCA+CGG | - | chr3_1:76385517-76385536 | None:intergenic | 55.0% | |
| GCAGGAGCTGCACATCTGTT+AGG | + | chr3_1:76385818-76385837 | Msa0376340:intron | 55.0% | |
| !! | GCGGTATAGGGGCACTATAC+CGG | + | chr3_1:76386293-76386312 | Msa0376340:intron | 55.0% |
| CTTGATAGGAACTGGGGTGC+TGG | + | chr3_1:76387001-76387020 | Msa0376340:CDS | 55.0% | |
| !! | ATAGGAACTGGGGTGCTGGT+TGG | + | chr3_1:76387005-76387024 | Msa0376340:CDS | 55.0% |
| CTAGTACACGGACAGGAGGT+TGG | - | chr3_1:76388174-76388193 | None:intergenic | 55.0% | |
| CCAACTAGTACACGGACAGG+AGG | - | chr3_1:76388178-76388197 | None:intergenic | 55.0% | |
| CCTCCTGTCCGTGTACTAGT+TGG | + | chr3_1:76388175-76388194 | Msa0376340:CDS | 55.0% | |
| !! | GACTGGCCTCATGACAAAGC+TGG | + | chr3_1:76388289-76388308 | Msa0376340:CDS | 55.0% |
| AAGCCTCCTCATTGCCGGAA+GGG | - | chr3_1:76388414-76388433 | None:intergenic | 55.0% | |
| AAAGCCTCCTCATTGCCGGA+AGG | - | chr3_1:76388415-76388434 | None:intergenic | 55.0% | |
| TTGGCTGCAGGGAGACTTGA+TGG | - | chr3_1:76388493-76388512 | None:intergenic | 55.0% | |
| TAGGGAGGCAGACGTTGACG+CGG | + | chr3_1:76382549-76382568 | Msa0376340:five_prime_UTR | 60.0% | |
| ! | ACGCCGGGAACGTTTTGCCA+CGG | - | chr3_1:76382582-76382601 | None:intergenic | 60.0% |
| GTTGCGTGCTACAGAACGCC+GGG | - | chr3_1:76382597-76382616 | None:intergenic | 60.0% | |
| AGTTCCCAAGCTCAGCGTCG+AGG | + | chr3_1:76383637-76383656 | Msa0376340:CDS | 60.0% | |
| ! | TCTGGGATCAGCCAACCGCA+AGG | - | chr3_1:76384488-76384507 | None:intergenic | 60.0% |
| ! | CGGTTGGCTGATCCCAGAGA+AGG | + | chr3_1:76384490-76384509 | Msa0376340:intron | 60.0% |
| !!! | GCCGCTGACTTTTGCGAGGA+TGG | + | chr3_1:76385157-76385176 | Msa0376340:CDS | 60.0% |
| !! | GACCGTGAAGGAAGTGCCCA+AGG | + | chr3_1:76385512-76385531 | Msa0376340:intron | 60.0% |
| CTCGCCATCTTGGCCCACAA+AGG | - | chr3_1:76387428-76387447 | None:intergenic | 60.0% | |
| GACGGGACTACTCGCCATCT+TGG | - | chr3_1:76387438-76387457 | None:intergenic | 60.0% | |
| ATGGCGAGTAGTCCCGTCGA+TGG | + | chr3_1:76387440-76387459 | Msa0376340:CDS | 60.0% | |
| GAAGCAGCTCCAGCCAGTTC+TGG | - | chr3_1:76388096-76388115 | None:intergenic | 60.0% | |
| AACTGGCTGGAGCTGCTTCC+AGG | + | chr3_1:76388097-76388116 | Msa0376340:CDS | 60.0% | |
| ACGGACAGGAGGTTGGCGAA+GGG | - | chr3_1:76388167-76388186 | None:intergenic | 60.0% | |
| GCGGAATGAGAGCCTCTCTG+AGG | - | chr3_1:76388392-76388411 | None:intergenic | 60.0% | |
| AGGCTCTCATTCCGCCCTTC+CGG | + | chr3_1:76388397-76388416 | Msa0376340:CDS | 60.0% | |
| ATTCCGCCCTTCCGGCAATG+AGG | + | chr3_1:76388405-76388424 | Msa0376340:CDS | 60.0% | |
| CCGACGCAAACTTGGCTGCA+GGG | - | chr3_1:76388504-76388523 | None:intergenic | 60.0% | |
| CCCTGCAGCCAAGTTTGCGT+CGG | + | chr3_1:76388501-76388520 | Msa0376340:CDS | 60.0% | |
| CCTGCAGCCAAGTTTGCGTC+GGG | + | chr3_1:76388502-76388521 | Msa0376340:CDS | 60.0% | |
| GTTGACGCGGTGGAAACCCG+TGG | + | chr3_1:76382562-76382581 | Msa0376340:five_prime_UTR | 65.0% | |
| ! | CGCCGGGAACGTTTTGCCAC+GGG | - | chr3_1:76382581-76382600 | None:intergenic | 65.0% |
| CCAGCGAAACGCAGGGGAAC+AGG | - | chr3_1:76383157-76383176 | None:intergenic | 65.0% | |
| CCTGTTCCCCTGCGTTTCGC+TGG | + | chr3_1:76383154-76383173 | Msa0376340:CDS | 65.0% | |
| CACGGACAGGAGGTTGGCGA+AGG | - | chr3_1:76388168-76388187 | None:intergenic | 65.0% | |
| CCTCCTCATTGCCGGAAGGG+CGG | - | chr3_1:76388411-76388430 | None:intergenic | 65.0% | |
| CCCGACGCAAACTTGGCTGC+AGG | - | chr3_1:76388505-76388524 | None:intergenic | 65.0% | |
| GGAGGCAGACGTTGACGCGG+TGG | + | chr3_1:76382552-76382571 | Msa0376340:five_prime_UTR | 70.0% | |
| CCGCCCTTCCGGCAATGAGG+AGG | + | chr3_1:76388408-76388427 | Msa0376340:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 76382513 | 76389032 | 76382513 | ID=Msa0376340;Name=Msa0376340 |
| chr3_1 | mRNA | 76382513 | 76389032 | 76382513 | ID=Msa0376340-mRNA-1;Parent=Msa0376340;Name=Msa0376340-mRNA-1;_AED=0.06;_eAED=0.06;_QI=205|1|1|1|0.92|0.85|14|282|677 |
| chr3_1 | exon | 76382513 | 76382707 | 76382513 | ID=Msa0376340-mRNA-1:exon:18062;Parent=Msa0376340-mRNA-1 |
| chr3_1 | exon | 76383054 | 76383384 | 76383054 | ID=Msa0376340-mRNA-1:exon:18063;Parent=Msa0376340-mRNA-1 |
| chr3_1 | exon | 76383472 | 76383515 | 76383472 | ID=Msa0376340-mRNA-1:exon:18064;Parent=Msa0376340-mRNA-1 |
| chr3_1 | exon | 76383597 | 76383675 | 76383597 | ID=Msa0376340-mRNA-1:exon:18065;Parent=Msa0376340-mRNA-1 |
| chr3_1 | exon | 76383755 | 76383871 | 76383755 | ID=Msa0376340-mRNA-1:exon:18066;Parent=Msa0376340-mRNA-1 |
| chr3_1 | exon | 76384018 | 76384200 | 76384018 | ID=Msa0376340-mRNA-1:exon:18067;Parent=Msa0376340-mRNA-1 |
| chr3_1 | exon | 76384322 | 76384408 | 76384322 | ID=Msa0376340-mRNA-1:exon:18068;Parent=Msa0376340-mRNA-1 |
| chr3_1 | exon | 76385139 | 76385242 | 76385139 | ID=Msa0376340-mRNA-1:exon:18069;Parent=Msa0376340-mRNA-1 |
| chr3_1 | exon | 76385322 | 76385409 | 76385322 | ID=Msa0376340-mRNA-1:exon:18070;Parent=Msa0376340-mRNA-1 |
| chr3_1 | exon | 76386818 | 76386898 | 76386818 | ID=Msa0376340-mRNA-1:exon:18071;Parent=Msa0376340-mRNA-1 |
| chr3_1 | exon | 76386998 | 76387074 | 76386998 | ID=Msa0376340-mRNA-1:exon:18072;Parent=Msa0376340-mRNA-1 |
| chr3_1 | exon | 76387398 | 76387533 | 76387398 | ID=Msa0376340-mRNA-1:exon:18073;Parent=Msa0376340-mRNA-1 |
| chr3_1 | exon | 76387745 | 76387807 | 76387745 | ID=Msa0376340-mRNA-1:exon:18074;Parent=Msa0376340-mRNA-1 |
| chr3_1 | exon | 76388097 | 76389032 | 76388097 | ID=Msa0376340-mRNA-1:exon:18075;Parent=Msa0376340-mRNA-1 |
| chr3_1 | five_prime_UTR | 76382513 | 76382707 | 76382513 | ID=Msa0376340-mRNA-1:five_prime_utr;Parent=Msa0376340-mRNA-1 |
| chr3_1 | five_prime_UTR | 76383054 | 76383063 | 76383054 | ID=Msa0376340-mRNA-1:five_prime_utr;Parent=Msa0376340-mRNA-1 |
| chr3_1 | CDS | 76383064 | 76383384 | 76383064 | ID=Msa0376340-mRNA-1:cds;Parent=Msa0376340-mRNA-1 |
| chr3_1 | CDS | 76383472 | 76383515 | 76383472 | ID=Msa0376340-mRNA-1:cds;Parent=Msa0376340-mRNA-1 |
| chr3_1 | CDS | 76383597 | 76383675 | 76383597 | ID=Msa0376340-mRNA-1:cds;Parent=Msa0376340-mRNA-1 |
| chr3_1 | CDS | 76383755 | 76383871 | 76383755 | ID=Msa0376340-mRNA-1:cds;Parent=Msa0376340-mRNA-1 |
| chr3_1 | CDS | 76384018 | 76384200 | 76384018 | ID=Msa0376340-mRNA-1:cds;Parent=Msa0376340-mRNA-1 |
| chr3_1 | CDS | 76384322 | 76384408 | 76384322 | ID=Msa0376340-mRNA-1:cds;Parent=Msa0376340-mRNA-1 |
| chr3_1 | CDS | 76385139 | 76385242 | 76385139 | ID=Msa0376340-mRNA-1:cds;Parent=Msa0376340-mRNA-1 |
| chr3_1 | CDS | 76385322 | 76385409 | 76385322 | ID=Msa0376340-mRNA-1:cds;Parent=Msa0376340-mRNA-1 |
| chr3_1 | CDS | 76386818 | 76386898 | 76386818 | ID=Msa0376340-mRNA-1:cds;Parent=Msa0376340-mRNA-1 |
| chr3_1 | CDS | 76386998 | 76387074 | 76386998 | ID=Msa0376340-mRNA-1:cds;Parent=Msa0376340-mRNA-1 |
| chr3_1 | CDS | 76387398 | 76387533 | 76387398 | ID=Msa0376340-mRNA-1:cds;Parent=Msa0376340-mRNA-1 |
| chr3_1 | CDS | 76387745 | 76387807 | 76387745 | ID=Msa0376340-mRNA-1:cds;Parent=Msa0376340-mRNA-1 |
| chr3_1 | CDS | 76388097 | 76388750 | 76388097 | ID=Msa0376340-mRNA-1:cds;Parent=Msa0376340-mRNA-1 |
| chr3_1 | three_prime_UTR | 76388751 | 76389032 | 76388751 | ID=Msa0376340-mRNA-1:three_prime_utr;Parent=Msa0376340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
