Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207460 | XP_003608731.1 | 98.000 | 350 | 7 | 0 | 1 | 350 | 1 | 350 | 0.0 | 699 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207460 | sp|P22988|LDHA_HORVU | 64.286 | 350 | 117 | 3 | 1 | 343 | 1 | 349 | 1.74e-162 | 461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa1207460 | 0.831796 | 1.362578e-55 | -8.615850e-47 |
| Msa0000570 | Msa1207460 | 0.813952 | 1.972712e-51 | -8.615850e-47 |
| Msa0032610 | Msa1207460 | -0.807168 | 5.767645e-50 | -8.615850e-47 |
| Msa0039770 | Msa1207460 | 0.841103 | 5.820140e-58 | -8.615850e-47 |
| Msa0042980 | Msa1207460 | 0.819689 | 1.018123e-52 | -8.615850e-47 |
| Msa0071240 | Msa1207460 | -0.801983 | 6.960067e-49 | -8.615850e-47 |
| Msa0085720 | Msa1207460 | -0.848415 | 6.221371e-60 | -8.615850e-47 |
| Msa0097120 | Msa1207460 | 0.805285 | 1.436855e-49 | -8.615850e-47 |
| Msa0614990 | Msa1207460 | -0.805916 | 1.059623e-49 | -8.615850e-47 |
| Msa0615270 | Msa1207460 | 0.801638 | 8.192646e-49 | -8.615850e-47 |
| Msa0616540 | Msa1207460 | -0.817767 | 2.779999e-52 | -8.615850e-47 |
| Msa0623380 | Msa1207460 | 0.801506 | 8.720440e-49 | -8.615850e-47 |
| Msa0650730 | Msa1207460 | -0.830509 | 2.821579e-55 | -8.615850e-47 |
| Msa0679550 | Msa1207460 | -0.815933 | 7.169944e-52 | -8.615850e-47 |
| Msa0733740 | Msa1207460 | 0.819990 | 8.689525e-53 | -8.615850e-47 |
| Msa0743120 | Msa1207460 | 0.816008 | 6.898410e-52 | -8.615850e-47 |
| Msa0755080 | Msa1207460 | -0.829823 | 4.149884e-55 | -8.615850e-47 |
| Msa0774810 | Msa1207460 | 0.805392 | 1.364526e-49 | -8.615850e-47 |
| Msa0791820 | Msa1207460 | -0.817962 | 2.511939e-52 | -8.615850e-47 |
| Msa0795890 | Msa1207460 | 0.820710 | 5.939423e-53 | -8.615850e-47 |
| Msa0827470 | Msa1207460 | -0.802757 | 4.821181e-49 | -8.615850e-47 |
| Msa0833670 | Msa1207460 | 0.817050 | 4.031537e-52 | -8.615850e-47 |
| Msa0834450 | Msa1207460 | -0.833670 | 4.666105e-56 | -8.615850e-47 |
| Msa0134110 | Msa1207460 | 0.847201 | 1.342916e-59 | -8.615850e-47 |
| Msa0140510 | Msa1207460 | 0.812129 | 4.951037e-51 | -8.615850e-47 |
| Msa0148120 | Msa1207460 | -0.852309 | 5.022418e-61 | -8.615850e-47 |
| Msa0175050 | Msa1207460 | -0.818965 | 1.488502e-52 | -8.615850e-47 |
| Msa0178860 | Msa1207460 | 0.802021 | 6.836070e-49 | -8.615850e-47 |
| Msa0180990 | Msa1207460 | 0.826629 | 2.442105e-54 | -8.615850e-47 |
| Msa0186670 | Msa1207460 | 0.813544 | 2.426202e-51 | -8.615850e-47 |
| Msa0191630 | Msa1207460 | -0.804848 | 1.773536e-49 | -8.615850e-47 |
| Msa0196020 | Msa1207460 | 0.808660 | 2.777512e-50 | -8.615850e-47 |
| Msa0223100 | Msa1207460 | -0.832110 | 1.139427e-55 | -8.615850e-47 |
| Msa0223290 | Msa1207460 | -0.834980 | 2.190134e-56 | -8.615850e-47 |
| Msa0223380 | Msa1207460 | -0.849121 | 3.962631e-60 | -8.615850e-47 |
| Msa0233610 | Msa1207460 | -0.812852 | 3.441060e-51 | -8.615850e-47 |
| Msa0365490 | Msa1207460 | -0.834807 | 2.420252e-56 | -8.615850e-47 |
| Msa0377530 | Msa1207460 | -0.800460 | 1.426104e-48 | -8.615850e-47 |
| Msa0381410 | Msa1207460 | -0.814066 | 1.861163e-51 | -8.615850e-47 |
| Msa0388030 | Msa1207460 | 0.847286 | 1.273207e-59 | -8.615850e-47 |
| Msa0388710 | Msa1207460 | -0.800013 | 1.758750e-48 | -8.615850e-47 |
| Msa0389810 | Msa1207460 | -0.858127 | 1.019302e-62 | -8.615850e-47 |
| Msa0394410 | Msa1207460 | 0.827799 | 1.281049e-54 | -8.615850e-47 |
| Msa0404000 | Msa1207460 | -0.814425 | 1.550973e-51 | -8.615850e-47 |
| Msa0404220 | Msa1207460 | -0.803661 | 3.134262e-49 | -8.615850e-47 |
| Msa0404700 | Msa1207460 | -0.812034 | 5.194659e-51 | -8.615850e-47 |
| Msa0438320 | Msa1207460 | 0.816605 | 5.072543e-52 | -8.615850e-47 |
| Msa0462540 | Msa1207460 | -0.811295 | 7.518454e-51 | -8.615850e-47 |
| Msa0464900 | Msa1207460 | -0.815724 | 7.984378e-52 | -8.615850e-47 |
| Msa0468130 | Msa1207460 | -0.870676 | 1.218899e-66 | -8.615850e-47 |
| Msa0482190 | Msa1207460 | 0.801235 | 9.908183e-49 | -8.615850e-47 |
| Msa0982270 | Msa1207460 | -0.860219 | 2.406096e-63 | -8.615850e-47 |
| Msa0982590 | Msa1207460 | -0.808891 | 2.478067e-50 | -8.615850e-47 |
| Msa0992490 | Msa1207460 | 0.802668 | 5.029070e-49 | -8.615850e-47 |
| Msa0999270 | Msa1207460 | 0.800284 | 1.549020e-48 | -8.615850e-47 |
| Msa1006850 | Msa1207460 | -0.808007 | 3.826788e-50 | -8.615850e-47 |
| Msa1012920 | Msa1207460 | -0.837153 | 6.146826e-57 | -8.615850e-47 |
| Msa1021340 | Msa1207460 | -0.803465 | 3.441874e-49 | -8.615850e-47 |
| Msa1047720 | Msa1207460 | -0.824659 | 7.158491e-54 | -8.615850e-47 |
| Msa1048700 | Msa1207460 | -0.824832 | 6.519677e-54 | -8.615850e-47 |
| Msa1060070 | Msa1207460 | -0.815559 | 8.688424e-52 | -8.615850e-47 |
| Msa1072530 | Msa1207460 | 0.807904 | 4.024758e-50 | -8.615850e-47 |
| Msa0241460 | Msa1207460 | 0.841604 | 4.295459e-58 | -8.615850e-47 |
| Msa0266210 | Msa1207460 | -0.807168 | 5.766212e-50 | -8.615850e-47 |
| Msa0279210 | Msa1207460 | 0.874739 | 5.334672e-68 | -8.615850e-47 |
| Msa0279250 | Msa1207460 | 0.863013 | 3.370594e-64 | -8.615850e-47 |
| Msa0287670 | Msa1207460 | -0.808016 | 3.809390e-50 | -8.615850e-47 |
| Msa0302650 | Msa1207460 | -0.816380 | 5.698466e-52 | -8.615850e-47 |
| Msa0312310 | Msa1207460 | -0.835972 | 1.228969e-56 | -8.615850e-47 |
| Msa0318970 | Msa1207460 | 0.873427 | 1.482840e-67 | -8.615850e-47 |
| Msa0349680 | Msa1207460 | -0.812242 | 4.677623e-51 | -8.615850e-47 |
| Msa0362060 | Msa1207460 | -0.809817 | 1.568676e-50 | -8.615850e-47 |
| Msa0363170 | Msa1207460 | -0.830738 | 2.479876e-55 | -8.615850e-47 |
| Msa1120620 | Msa1207460 | -0.820518 | 6.576002e-53 | -8.615850e-47 |
| Msa1130210 | Msa1207460 | 0.809199 | 2.129660e-50 | -8.615850e-47 |
| Msa1130290 | Msa1207460 | 0.804510 | 2.087164e-49 | -8.615850e-47 |
| Msa1132860 | Msa1207460 | 0.821102 | 4.826986e-53 | -8.615850e-47 |
| Msa1135880 | Msa1207460 | -0.808235 | 3.420862e-50 | -8.615850e-47 |
| Msa1143930 | Msa1207460 | 0.810783 | 9.708309e-51 | -8.615850e-47 |
| Msa1148720 | Msa1207460 | -0.806319 | 8.716771e-50 | -8.615850e-47 |
| Msa1148750 | Msa1207460 | -0.818668 | 1.738616e-52 | -8.615850e-47 |
| Msa1157020 | Msa1207460 | -0.800465 | 1.423312e-48 | -8.615850e-47 |
| Msa1163590 | Msa1207460 | 0.801584 | 8.404862e-49 | -8.615850e-47 |
| Msa1168040 | Msa1207460 | 0.807850 | 4.132917e-50 | -8.615850e-47 |
| Msa1172130 | Msa1207460 | 0.800928 | 1.145054e-48 | -8.615850e-47 |
| Msa1174310 | Msa1207460 | -0.841981 | 3.416634e-58 | -8.615850e-47 |
| Msa1182640 | Msa1207460 | -0.803545 | 3.312615e-49 | -8.615850e-47 |
| Msa1184150 | Msa1207460 | 0.825694 | 4.077123e-54 | -8.615850e-47 |
| Msa1207460 | Msa1217430 | 0.815652 | 8.283946e-52 | -8.615850e-47 |
| Msa1207460 | Msa1222280 | -0.805104 | 1.568130e-49 | -8.615850e-47 |
| Msa1207460 | Msa1228160 | 0.870181 | 1.770897e-66 | -8.615850e-47 |
| Msa1207460 | Msa1235400 | -0.810537 | 1.097078e-50 | -8.615850e-47 |
| Msa1207460 | Msa1236070 | 0.838117 | 3.479100e-57 | -8.615850e-47 |
| Msa1207460 | Msa1257640 | 0.970665 | 5.799866e-132 | -8.615850e-47 |
| Msa1207460 | Msa1271170 | 0.833000 | 6.856627e-56 | -8.615850e-47 |
| Msa1207460 | Msa1276510 | -0.824200 | 9.181567e-54 | -8.615850e-47 |
| Msa1207460 | Msa1300350 | 0.808546 | 2.936731e-50 | -8.615850e-47 |
| Msa1207460 | Msa1302190 | 0.834422 | 3.025575e-56 | -8.615850e-47 |
| Msa1207460 | Msa1307740 | -0.870788 | 1.119680e-66 | -8.615850e-47 |
| Msa1207460 | Msa1308330 | 0.891027 | 5.777489e-74 | -8.615850e-47 |
| Msa1207460 | Msa1314770 | -0.847705 | 9.764108e-60 | -8.615850e-47 |
| Msa1207460 | Msa1342640 | 0.800646 | 1.307408e-48 | -8.615850e-47 |
| Msa1207460 | Msa1350690 | -0.808128 | 3.605675e-50 | -8.615850e-47 |
| Msa1207460 | Msa1371090 | -0.812024 | 5.221092e-51 | -8.615850e-47 |
| Msa1207460 | Msa1376160 | 0.803823 | 2.900053e-49 | -8.615850e-47 |
| Msa1207460 | Msa1396010 | 0.803052 | 4.189323e-49 | -8.615850e-47 |
| Msa1207460 | Msa1417810 | 0.815685 | 8.145948e-52 | -8.615850e-47 |
| Msa1207460 | Msa1438700 | -0.803653 | 3.145831e-49 | -8.615850e-47 |
| Msa1207460 | Msa1444250 | 0.811592 | 6.483252e-51 | -8.615850e-47 |
| Msa1207460 | Msa1445400 | 0.817313 | 3.517879e-52 | -8.615850e-47 |
| Msa1207460 | Msa1449350 | 0.810042 | 1.402835e-50 | -8.615850e-47 |
| Msa1207460 | Msa1459760 | 0.847321 | 1.245146e-59 | -8.615850e-47 |
| Msa0489610 | Msa1207460 | -0.806487 | 8.032561e-50 | -8.615850e-47 |
| Msa0491500 | Msa1207460 | -0.846807 | 1.722227e-59 | -8.615850e-47 |
| Msa0491520 | Msa1207460 | -0.844695 | 6.447241e-59 | -8.615850e-47 |
| Msa0504410 | Msa1207460 | -0.804385 | 2.215887e-49 | -8.615850e-47 |
| Msa0505060 | Msa1207460 | -0.834296 | 3.253929e-56 | -8.615850e-47 |
| Msa0519190 | Msa1207460 | -0.800005 | 1.765504e-48 | -8.615850e-47 |
| Msa0532100 | Msa1207460 | 0.803146 | 4.007438e-49 | -8.615850e-47 |
| Msa0553220 | Msa1207460 | 0.809904 | 1.502572e-50 | -8.615850e-47 |
| Msa0561130 | Msa1207460 | 0.807734 | 4.374065e-50 | -8.615850e-47 |
| Msa0580390 | Msa1207460 | 0.816709 | 4.809250e-52 | -8.615850e-47 |
| Msa0581920 | Msa1207460 | -0.830538 | 2.775823e-55 | -8.615850e-47 |
| Msa0587190 | Msa1207460 | -0.806604 | 7.589756e-50 | -8.615850e-47 |
| Msa0864470 | Msa1207460 | 0.827062 | 1.924614e-54 | -8.615850e-47 |
| Msa0941540 | Msa1207460 | -0.809254 | 2.071707e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207460 | MtrunA17_Chr4g0056321 | 98.000 | 350 | 7 | 0 | 1 | 350 | 1 | 350 | 0.0 | 699 |
| Msa1207460 | MtrunA17_Chr5g0399111 | 85.143 | 350 | 52 | 0 | 1 | 350 | 1 | 350 | 0.0 | 614 |
| Msa1207460 | MtrunA17_Chr4g0049321 | 24.012 | 329 | 210 | 13 | 39 | 350 | 46 | 351 | 8.20e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1207460 | AT4G17260.1 | 76.487 | 353 | 80 | 1 | 1 | 350 | 1 | 353 | 0.0 | 543 |
| Msa1207460 | AT2G22780.1 | 23.765 | 324 | 217 | 12 | 39 | 350 | 44 | 349 | 7.11e-12 | 66.2 |
Find 140 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGGCGCGTTCCATTATT+AGG | 0.155648 | 8_1:+64908761 | Msa1207460:CDS |
| TACATCGCATGGAAGCTTTC+TGG | 0.223266 | 8_1:+64907284 | Msa1207460:CDS |
| TCCGAATTCAGCCACCATTT+TGG | 0.237708 | 8_1:-64909096 | None:intergenic |
| GTCTAAAAGGTTACACTTCT+TGG | 0.242478 | 8_1:+64908716 | Msa1207460:CDS |
| TTTCCTTTGGTCCCTAATAA+TGG | 0.266030 | 8_1:-64908773 | None:intergenic |
| GAGGAATCTTTCTCTGTTCC+AGG | 0.273770 | 8_1:+64907184 | Msa1207460:CDS |
| AATTCACCCTGTGTCTGTTT+TGG | 0.299725 | 8_1:+64908795 | Msa1207460:CDS |
| TTTCTGGGTTTCCTTCTAAT+CGG | 0.317162 | 8_1:+64907300 | Msa1207460:CDS |
| TATGAAGTCATCAGTCTAAA+AGG | 0.318657 | 8_1:+64908703 | Msa1207460:CDS |
| TTAGTACTTGCTATCCAAAA+TGG | 0.319322 | 8_1:+64909082 | Msa1207460:three_prime_UTR |
| TGGGTTAAGTCAAGGCCGTC+TGG | 0.326744 | 8_1:-64906834 | None:intergenic |
| CTTGGCGCGTTCCATTATTA+GGG | 0.327453 | 8_1:+64908762 | Msa1207460:CDS |
| ATTTGGATTCATCTCGGTTT+CGG | 0.328348 | 8_1:+64907342 | Msa1207460:CDS |
| TCCAAAATGGTGGCTGAATT+CGG | 0.330744 | 8_1:+64909095 | Msa1207460:three_prime_UTR |
| AATGGCCATGCCGACGTTAC+CGG | 0.352563 | 8_1:-64906934 | None:intergenic |
| CCCACTGTTTCAGTGTTATT+CGG | 0.357878 | 8_1:+64906615 | Msa1207460:five_prime_UTR |
| GCCATTGGGTACTCGGTGGC+TGG | 0.359042 | 8_1:+64908739 | Msa1207460:CDS |
| TTTAAATACCCAACTGAGTC+TGG | 0.359309 | 8_1:-64908969 | None:intergenic |
| ACATCGCATGGAAGCTTTCT+GGG | 0.367928 | 8_1:+64907285 | Msa1207460:CDS |
| GATGATGATTTGTTAGTTGC+AGG | 0.378537 | 8_1:-64906768 | None:intergenic |
| GGATTCTGCTAAAACTATCT+TGG | 0.379469 | 8_1:+64908942 | Msa1207460:CDS |
| GAATTCGGATCTTTGTAGTA+TGG | 0.380379 | 8_1:+64909110 | Msa1207460:three_prime_UTR |
| TGGGTACTCGGTGGCTGGCT+TGG | 0.388620 | 8_1:+64908744 | Msa1207460:CDS |
| TTGGTGCAGGCATGCATAGC+AGG | 0.388957 | 8_1:+64908538 | Msa1207460:intron |
| AAACCGAGATGAATCCAAAT+TGG | 0.390309 | 8_1:-64907339 | None:intergenic |
| CATGCATAGCAGGGGAGCAC+GGG | 0.394049 | 8_1:+64908548 | Msa1207460:CDS |
| TTCCTTCTAATCGGGTCATC+GGG | 0.399644 | 8_1:+64907309 | Msa1207460:CDS |
| GTTAGTGAGTCTGTTAGATA+TGG | 0.405700 | 8_1:-64908997 | None:intergenic |
| CCTCCTCTTCCAAGCTGTGC+TGG | 0.408953 | 8_1:-64908865 | None:intergenic |
| ATCTCGCCGCGGAGTTTGTC+GGG | 0.409424 | 8_1:-64907014 | None:intergenic |
| ATGAGGAGGAACAAAGGCTT+AGG | 0.410444 | 8_1:+64908920 | Msa1207460:CDS |
| GGTCAACGCTCAGGATGTTC+AGG | 0.411810 | 8_1:+64907388 | Msa1207460:CDS |
| AGATGGGTTTGAAGAAGGCT+TGG | 0.412115 | 8_1:-64906854 | None:intergenic |
| TTCTTGGGCCATTGGGTACT+CGG | 0.413662 | 8_1:+64908732 | Msa1207460:CDS |
| GATCTTGTTGTGACGCTTTG+TGG | 0.420065 | 8_1:-64906898 | None:intergenic |
| TCTAATCGGGTCATCGGGTC+GGG | 0.422317 | 8_1:+64907314 | Msa1207460:CDS |
| TTCTGGGTTTCCTTCTAATC+GGG | 0.423028 | 8_1:+64907301 | Msa1207460:CDS |
| ATGTAGGTAAGAACATCAAC+GGG | 0.425256 | 8_1:-64907266 | None:intergenic |
| TTTCCTTCTAATCGGGTCAT+CGG | 0.428046 | 8_1:+64907308 | Msa1207460:CDS |
| GGTTACACTTCTTGGGCCAT+TGG | 0.429243 | 8_1:+64908724 | Msa1207460:CDS |
| ACGATGATCAGAACCGTTTC+CGG | 0.432903 | 8_1:-64907236 | None:intergenic |
| TCTAAAAGGTTACACTTCTT+GGG | 0.435111 | 8_1:+64908717 | Msa1207460:CDS |
| CGTCGGTGAGGTCTTGAGTT+AGG | 0.435609 | 8_1:-64906968 | None:intergenic |
| GGCTCGTTACTCGCCGGAAA+CGG | 0.437337 | 8_1:+64907223 | Msa1207460:CDS |
| TTCTAATCGGGTCATCGGGT+CGG | 0.439376 | 8_1:+64907313 | Msa1207460:CDS |
| GTTACACTTCTTGGGCCATT+GGG | 0.447787 | 8_1:+64908725 | Msa1207460:CDS |
| ATCTTGTTGTGACGCTTTGT+GGG | 0.453660 | 8_1:-64906897 | None:intergenic |
| CATAGAACTTGAAATTTGAC+TGG | 0.457878 | 8_1:-64909157 | None:intergenic |
| TGGTGGTGCTGCGTTTGAGA+TGG | 0.467126 | 8_1:-64906871 | None:intergenic |
| GATGGGTTTGAAGAAGGCTT+GGG | 0.470612 | 8_1:-64906853 | None:intergenic |
| TTGTGACGCTTTGTGGGTGA+TGG | 0.472163 | 8_1:-64906891 | None:intergenic |
| CTTGGAAGAGGAGGGGTGCT+TGG | 0.474117 | 8_1:+64908874 | Msa1207460:CDS |
| GAGATCGGAGCCAGCAGTAA+CGG | 0.484502 | 8_1:-64907102 | None:intergenic |
| GTTTGAGATGGGTTTGAAGA+AGG | 0.490323 | 8_1:-64906859 | None:intergenic |
| GCATGCATAGCAGGGGAGCA+CGG | 0.503297 | 8_1:+64908547 | Msa1207460:CDS |
| GGTGGTGCTGCGTTTGAGAT+GGG | 0.503846 | 8_1:-64906870 | None:intergenic |
| ACCGATCTGCCTTGCACCGG+CGG | 0.505308 | 8_1:-64907135 | None:intergenic |
| TTGGAGGTCCAGACTCAGTT+GGG | 0.507271 | 8_1:+64908961 | Msa1207460:CDS |
| CCTCATTGCTGATCACCTCC+AGG | 0.512139 | 8_1:+64907367 | Msa1207460:CDS |
| GTTGAATACTCCGTTACTGC+TGG | 0.512854 | 8_1:+64907092 | Msa1207460:CDS |
| CTCATTATTCATGTGCACAT+TGG | 0.516320 | 8_1:-64908902 | None:intergenic |
| GTATTGTCACCGCCGGTGCA+AGG | 0.516525 | 8_1:+64907126 | Msa1207460:CDS |
| TCACCTCCAGGTCAACGCTC+AGG | 0.517562 | 8_1:+64907379 | Msa1207460:CDS |
| CCCTTTGGCTCGTTACTCGC+CGG | 0.519160 | 8_1:+64907217 | Msa1207460:CDS |
| AGCGGTTCTGCTTCGACGTT+AGG | 0.520401 | 8_1:+64906810 | Msa1207460:CDS |
| TGGTCTAGCATCAGCATTGG+TGG | 0.521752 | 8_1:+64908589 | Msa1207460:CDS |
| TGAGGAGGAACAAAGGCTTA+GGG | 0.530899 | 8_1:+64908921 | Msa1207460:CDS |
| TTGCCAGCACAGCTTGGAAG+AGG | 0.536651 | 8_1:+64908862 | Msa1207460:CDS |
| CTTGGAGGTCCAGACTCAGT+TGG | 0.544227 | 8_1:+64908960 | Msa1207460:CDS |
| CACAACAAGATCTCCGTCAT+CGG | 0.544348 | 8_1:+64906909 | Msa1207460:CDS |
| TTCTGCTAAAACTATCTTGG+AGG | 0.545697 | 8_1:+64908945 | Msa1207460:CDS |
| CCGGCGAGTAACGAGCCAAA+GGG | 0.546843 | 8_1:-64907217 | None:intergenic |
| AAGATCTCCGTCATCGGCGC+CGG | 0.547198 | 8_1:+64906915 | Msa1207460:CDS |
| ACCGCCGGTGCAAGGCAGAT+CGG | 0.553456 | 8_1:+64907134 | Msa1207460:CDS |
| ATGTTCTTACCTACATCGCA+TGG | 0.553838 | 8_1:+64907273 | Msa1207460:CDS |
| CCAGCACAGCTTGGAAGAGG+AGG | 0.555853 | 8_1:+64908865 | Msa1207460:CDS |
| CCCTTAGCCAAAACAGACAC+AGG | 0.556926 | 8_1:-64908802 | None:intergenic |
| GGCAGATCGGTGGTGAGTCT+AGG | 0.557502 | 8_1:+64907147 | Msa1207460:CDS |
| GGGTTAAGTCAAGGCCGTCT+GGG | 0.559723 | 8_1:-64906833 | None:intergenic |
| TGCATATGAGAAAGAAACGC+TGG | 0.561783 | 8_1:+64908648 | Msa1207460:CDS |
| CAGCACAGCTTGGAAGAGGA+GGG | 0.569000 | 8_1:+64908866 | Msa1207460:CDS |
| GGTAAGAACATCAACGGGGT+TGG | 0.569302 | 8_1:-64907261 | None:intergenic |
| TTGAGCTTGCCAGCACAGCT+TGG | 0.573311 | 8_1:+64908856 | Msa1207460:CDS |
| AGAAAGCTTCCATGCGATGT+AGG | 0.573366 | 8_1:-64907282 | None:intergenic |
| TGGTGCAGGCATGCATAGCA+GGG | 0.575679 | 8_1:+64908539 | Msa1207460:intron |
| GTACCAATTTGGATTCATCT+CGG | 0.575971 | 8_1:+64907336 | Msa1207460:CDS |
| TCCGGCGAGTAACGAGCCAA+AGG | 0.577653 | 8_1:-64907218 | None:intergenic |
| GGTGAGGTCTTGAGTTAGGA+TGG | 0.578230 | 8_1:-64906964 | None:intergenic |
| TCTAACAGACTCACTAACTA+CGG | 0.580437 | 8_1:+64909002 | Msa1207460:three_prime_UTR |
| GACGTTACCGGCGCCGATGA+CGG | 0.581018 | 8_1:-64906922 | None:intergenic |
| ATGCATAGCAGGGGAGCACG+GGG | 0.582114 | 8_1:+64908549 | Msa1207460:CDS |
| AGTAACACACTGGACTGTGA+AGG | 0.583599 | 8_1:-64906677 | None:intergenic |
| AGTTAGGATGGTCTGAGCAA+TGG | 0.584206 | 8_1:-64906952 | None:intergenic |
| ACCGAATAACACTGAAACAG+TGG | 0.584969 | 8_1:-64906616 | None:intergenic |
| AGCACAGCTTGGAAGAGGAG+GGG | 0.586218 | 8_1:+64908867 | Msa1207460:CDS |
| CGGCGCCGGTAACGTCGGCA+TGG | 0.586725 | 8_1:+64906929 | Msa1207460:CDS |
| GGCGGTGACAATACAGAGAT+CGG | 0.590044 | 8_1:-64907117 | None:intergenic |
| TTGTGGTCTAGCATCAGCAT+TGG | 0.596257 | 8_1:+64908586 | Msa1207460:CDS |
| GTCATCGGCGCCGGTAACGT+CGG | 0.596385 | 8_1:+64906924 | Msa1207460:CDS |
| TGACGCTTTGTGGGTGATGG+TGG | 0.598957 | 8_1:-64906888 | None:intergenic |
| AGAAGGCTTGGGTTAAGTCA+AGG | 0.599256 | 8_1:-64906842 | None:intergenic |
| ACCACCGATCTGCCTTGCAC+CGG | 0.601852 | 8_1:-64907138 | None:intergenic |
| TGAATAATGAGGAGGAACAA+AGG | 0.605881 | 8_1:+64908914 | Msa1207460:CDS |
| GGGATAGTTCAGTGGCATTG+TGG | 0.607315 | 8_1:+64908569 | Msa1207460:CDS |
| CAATGTGCACATGAATAATG+AGG | 0.607609 | 8_1:+64908903 | Msa1207460:CDS |
| CTAGGCTTAATCTTCTTCAG+AGG | 0.607829 | 8_1:+64907165 | Msa1207460:CDS |
| TTGCGGTGGAAGACAACCAT+GGG | 0.611610 | 8_1:-64909048 | None:intergenic |
| GCCAGCCACCGAGTACCCAA+TGG | 0.611646 | 8_1:-64908740 | None:intergenic |
| ATACTGGTTTGGAAAACAGT+AGG | 0.613609 | 8_1:-64906639 | None:intergenic |
| GTAACACACTGGACTGTGAA+GGG | 0.614122 | 8_1:-64906676 | None:intergenic |
| CGGAGGAGTTGATCTTAACA+CGG | 0.616884 | 8_1:-64907070 | None:intergenic |
| CCGAATAACACTGAAACAGT+GGG | 0.627931 | 8_1:-64906615 | None:intergenic |
| GCTTCGACGTTAGGCCCAGA+CGG | 0.630277 | 8_1:+64906819 | Msa1207460:CDS |
| AGTTGATCTTAACACGGGGA+AGG | 0.633694 | 8_1:-64907064 | None:intergenic |
| GTTCCATTATTAGGGACCAA+AGG | 0.633706 | 8_1:+64908770 | Msa1207460:CDS |
| AGCAGTAACGGAGTATTCAA+CGG | 0.634943 | 8_1:-64907090 | None:intergenic |
| GATGTAGGTAAGAACATCAA+CGG | 0.637519 | 8_1:-64907267 | None:intergenic |
| GGAGGAGTTGATCTTAACAC+GGG | 0.638442 | 8_1:-64907069 | None:intergenic |
| GATCTCTGTATTGTCACCGC+CGG | 0.642113 | 8_1:+64907119 | Msa1207460:CDS |
| CGATGACGAGCTCGTCGGTG+AGG | 0.651455 | 8_1:-64906980 | None:intergenic |
| AACAAACCCGACAAACTCCG+CGG | 0.654627 | 8_1:+64907008 | Msa1207460:CDS |
| CTTGCGGTGGAAGACAACCA+TGG | 0.657039 | 8_1:-64909049 | None:intergenic |
| GGCGAGTAACGAGCCAAAGG+GGG | 0.657545 | 8_1:-64907215 | None:intergenic |
| CCTGGAGGTGATCAGCAATG+AGG | 0.659064 | 8_1:-64907367 | None:intergenic |
| TTGGGCCATTGGGTACTCGG+TGG | 0.669464 | 8_1:+64908735 | Msa1207460:CDS |
| CGGCGAGTAACGAGCCAAAG+GGG | 0.669624 | 8_1:-64907216 | None:intergenic |
| GGTGCAGGCATGCATAGCAG+GGG | 0.669710 | 8_1:+64908540 | Msa1207460:intron |
| TCAATCATCATGCACAAGAG+CGG | 0.672795 | 8_1:+64906792 | Msa1207460:exon |
| GTACTTGCTATCCAAAATGG+TGG | 0.674426 | 8_1:+64909085 | Msa1207460:three_prime_UTR |
| CCTTAGCCAAAACAGACACA+GGG | 0.678012 | 8_1:-64908801 | None:intergenic |
| GTCGACGATGACGAGCTCGT+CGG | 0.681636 | 8_1:-64906985 | None:intergenic |
| TGTGCACATGAATAATGAGG+AGG | 0.692647 | 8_1:+64908906 | Msa1207460:CDS |
| GGAGCACGGGGATAGTTCAG+TGG | 0.698387 | 8_1:+64908561 | Msa1207460:CDS |
| CATCCTGAGCGTTGACCTGG+AGG | 0.703641 | 8_1:-64907382 | None:intergenic |
| TGTGTGTGAAAGTAACACAC+TGG | 0.704615 | 8_1:-64906687 | None:intergenic |
| GAAGATCAAGCATCTCGCCG+CGG | 0.743598 | 8_1:-64907025 | None:intergenic |
| AGTAACGGAGTATTCAACGG+AGG | 0.760315 | 8_1:-64907087 | None:intergenic |
| ATATGAATAGCAAATGTGTG+TGG | 0.762223 | 8_1:-64906744 | None:intergenic |
| GAGGAGTTGATCTTAACACG+GGG | 0.771491 | 8_1:-64907068 | None:intergenic |
| TGTAGGTAAGAACATCAACG+GGG | 0.839564 | 8_1:-64907265 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAGTTAATAAGGATAATT+TGG | - | chr8_1:64908110-64908129 | None:intergenic | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | chr8_1:64908109-64908128 | Msa1207460:intron | 15.0% |
| !!! | TAGTTTTAAAAGTAATACTT+TGG | + | chr8_1:64908133-64908152 | Msa1207460:intron | 15.0% |
| !!! | TTATTTTCATGATGATATGT+TGG | + | chr8_1:64907477-64907496 | Msa1207460:intron | 20.0% |
| !!! | TTCAAATGTTTTTGAAGTAA+TGG | + | chr8_1:64907860-64907879 | Msa1207460:intron | 20.0% |
| !! | AATGATTAAAAGAAAGAGAA+TGG | + | chr8_1:64908076-64908095 | Msa1207460:intron | 20.0% |
| !! | AAACTAACCAATAGTTAATA+AGG | - | chr8_1:64908119-64908138 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr8_1:64908196-64908215 | Msa1207460:intron | 20.0% |
| !!! | AATTTTCATTTCGTGTAATT+TGG | + | chr8_1:64908355-64908374 | Msa1207460:intron | 20.0% |
| !!! | ATTTTCATTTCGTGTAATTT+GGG | + | chr8_1:64908356-64908375 | Msa1207460:intron | 20.0% |
| !! | AATTGTAAATATGAGACAAT+TGG | - | chr8_1:64908383-64908402 | None:intergenic | 20.0% |
| !! | AAAAGAAAAAGATACTGGTT+TGG | - | chr8_1:64906653-64906672 | None:intergenic | 25.0% |
| !!! | TTGGATGAATATTTTTGACT+GGG | + | chr8_1:64907496-64907515 | Msa1207460:intron | 25.0% |
| !!! | AATTACTATTTTTGAGCTCT+AGG | + | chr8_1:64907545-64907564 | Msa1207460:intron | 25.0% |
| !!! | ATTACTATTTTTGAGCTCTA+GGG | + | chr8_1:64907546-64907565 | Msa1207460:intron | 25.0% |
| ! | TTTAGTGTCAAATTGCAAAT+TGG | + | chr8_1:64907578-64907597 | Msa1207460:intron | 25.0% |
| ! | CTAAAAATTTCTACTCCAAA+AGG | - | chr8_1:64907671-64907690 | None:intergenic | 25.0% |
| ! | AACTTATGTTGATCTCTATT+CGG | - | chr8_1:64907941-64907960 | None:intergenic | 25.0% |
| ! | TGTTTATTCACTCTTAATTC+AGG | + | chr8_1:64908419-64908438 | Msa1207460:intron | 25.0% |
| ! | GTTTATTCACTCTTAATTCA+GGG | + | chr8_1:64908420-64908439 | Msa1207460:intron | 25.0% |
| ! | TTTATTCACTCTTAATTCAG+GGG | + | chr8_1:64908421-64908440 | Msa1207460:intron | 25.0% |
| !! | AGTGTGAAATAAAGTGTTAT+TGG | + | chr8_1:64908519-64908538 | Msa1207460:intron | 25.0% |
| GGAAGAAAAGAAAAAGATAC+TGG | - | chr8_1:64906658-64906677 | None:intergenic | 30.0% | |
| ATATGAATAGCAAATGTGTG+TGG | - | chr8_1:64906747-64906766 | None:intergenic | 30.0% | |
| !! | GTTGGATGAATATTTTTGAC+TGG | + | chr8_1:64907495-64907514 | Msa1207460:intron | 30.0% |
| ATATCAATACATAGTGTCTC+CGG | - | chr8_1:64907606-64907625 | None:intergenic | 30.0% | |
| ! | TCGGTTTGACATAAAAACAA+GGG | + | chr8_1:64907729-64907748 | Msa1207460:intron | 30.0% |
| !!! | TTTTTGAAGTAATGGTCCAT+TGG | + | chr8_1:64907868-64907887 | Msa1207460:intron | 30.0% |
| !!! | TTTTGAAGTAATGGTCCATT+GGG | + | chr8_1:64907869-64907888 | Msa1207460:intron | 30.0% |
| ! | TGTTGTTTAGTTTCATGAAC+TGG | - | chr8_1:64907908-64907927 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr8_1:64908226-64908245 | None:intergenic | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr8_1:64908028-64908047 | Msa1207460:intron | 30.0% |
| GTAGTGTGCATAGTATTAAT+TGG | + | chr8_1:64908158-64908177 | Msa1207460:intron | 30.0% | |
| TGTGCATAGTATTAATTGGA+GGG | + | chr8_1:64908162-64908181 | Msa1207460:intron | 30.0% | |
| GTTCTATTAAACTGACAGAA+TGG | + | chr8_1:64908298-64908317 | Msa1207460:intron | 30.0% | |
| ! | ATTGACGATCTTTAAGTTCA+AGG | + | chr8_1:64908329-64908348 | Msa1207460:intron | 30.0% |
| GTCTCATATTTACAATTTCG+AGG | + | chr8_1:64908386-64908405 | Msa1207460:intron | 30.0% | |
| TTCACTATAGAAAGTGAGAA+AGG | + | chr8_1:64908492-64908511 | Msa1207460:intron | 30.0% | |
| ! | AAATAAAGTGTTATTGGTGC+AGG | + | chr8_1:64908525-64908544 | Msa1207460:intron | 30.0% |
| !!! | TATTCCTGTCCTTAGTTTTT+TGG | + | chr8_1:64908612-64908631 | Msa1207460:CDS | 30.0% |
| !! | GTTGTTTCTCCAAAAAACTA+AGG | - | chr8_1:64908624-64908643 | None:intergenic | 30.0% |
| TATGAAGTCATCAGTCTAAA+AGG | + | chr8_1:64908703-64908722 | Msa1207460:CDS | 30.0% | |
| TCTAAAAGGTTACACTTCTT+GGG | + | chr8_1:64908717-64908736 | Msa1207460:CDS | 30.0% | |
| ! | TTTGTCTTTTACATTTCCCA+TGG | + | chr8_1:64909032-64909051 | Msa1207460:three_prime_UTR | 30.0% |
| TACTAAGCAAAAAACACTTG+CGG | - | chr8_1:64909068-64909087 | None:intergenic | 30.0% | |
| !! | TTAGTACTTGCTATCCAAAA+TGG | + | chr8_1:64909082-64909101 | Msa1207460:three_prime_UTR | 30.0% |
| CATAGAACTTGAAATTTGAC+TGG | - | chr8_1:64909160-64909179 | None:intergenic | 30.0% | |
| !! | ATACTGGTTTGGAAAACAGT+AGG | - | chr8_1:64906642-64906661 | None:intergenic | 35.0% |
| !! | GATGATGATTTGTTAGTTGC+AGG | - | chr8_1:64906771-64906790 | None:intergenic | 35.0% |
| ATGTAGGTAAGAACATCAAC+GGG | - | chr8_1:64907269-64907288 | None:intergenic | 35.0% | |
| GATGTAGGTAAGAACATCAA+CGG | - | chr8_1:64907270-64907289 | None:intergenic | 35.0% | |
| TTTCTGGGTTTCCTTCTAAT+CGG | + | chr8_1:64907300-64907319 | Msa1207460:CDS | 35.0% | |
| GTACCAATTTGGATTCATCT+CGG | + | chr8_1:64907336-64907355 | Msa1207460:CDS | 35.0% | |
| AAACCGAGATGAATCCAAAT+TGG | - | chr8_1:64907342-64907361 | None:intergenic | 35.0% | |
| ATTTGGATTCATCTCGGTTT+CGG | + | chr8_1:64907342-64907361 | Msa1207460:CDS | 35.0% | |
| ! | GTCAAATTGCAAATTGGTTC+CGG | + | chr8_1:64907584-64907603 | Msa1207460:intron | 35.0% |
| !! | GTCGGTTTGACATAAAAACA+AGG | + | chr8_1:64907728-64907747 | Msa1207460:intron | 35.0% |
| ! | CAACGATTGAAGACATGTTT+TGG | - | chr8_1:64907830-64907849 | None:intergenic | 35.0% |
| ! | TTTGAAGTAATGGTCCATTG+GGG | + | chr8_1:64907870-64907889 | Msa1207460:intron | 35.0% |
| GTGTGCATAGTATTAATTGG+AGG | + | chr8_1:64908161-64908180 | Msa1207460:intron | 35.0% | |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr8_1:64908262-64908281 | Msa1207460:intron | 35.0% |
| CTCACTTTCTATAGTGAACA+CGG | - | chr8_1:64908490-64908509 | None:intergenic | 35.0% | |
| TTCTCCAAAAAACTAAGGAC+AGG | - | chr8_1:64908619-64908638 | None:intergenic | 35.0% | |
| GTCTAAAAGGTTACACTTCT+TGG | + | chr8_1:64908716-64908735 | Msa1207460:CDS | 35.0% | |
| TTTCCTTTGGTCCCTAATAA+TGG | - | chr8_1:64908776-64908795 | None:intergenic | 35.0% | |
| CTCATTATTCATGTGCACAT+TGG | - | chr8_1:64908905-64908924 | None:intergenic | 35.0% | |
| CAATGTGCACATGAATAATG+AGG | + | chr8_1:64908903-64908922 | Msa1207460:CDS | 35.0% | |
| TGAATAATGAGGAGGAACAA+AGG | + | chr8_1:64908914-64908933 | Msa1207460:CDS | 35.0% | |
| GGATTCTGCTAAAACTATCT+TGG | + | chr8_1:64908942-64908961 | Msa1207460:CDS | 35.0% | |
| TTCTGCTAAAACTATCTTGG+AGG | + | chr8_1:64908945-64908964 | Msa1207460:CDS | 35.0% | |
| TTTAAATACCCAACTGAGTC+TGG | - | chr8_1:64908972-64908991 | None:intergenic | 35.0% | |
| GTTAGTGAGTCTGTTAGATA+TGG | - | chr8_1:64909000-64909019 | None:intergenic | 35.0% | |
| TCTAACAGACTCACTAACTA+CGG | + | chr8_1:64909002-64909021 | Msa1207460:three_prime_UTR | 35.0% | |
| GAATTCGGATCTTTGTAGTA+TGG | + | chr8_1:64909110-64909129 | Msa1207460:three_prime_UTR | 35.0% | |
| CCGAATAACACTGAAACAGT+GGG | - | chr8_1:64906618-64906637 | None:intergenic | 40.0% | |
| ! | CCCACTGTTTCAGTGTTATT+CGG | + | chr8_1:64906615-64906634 | Msa1207460:five_prime_UTR | 40.0% |
| ACCGAATAACACTGAAACAG+TGG | - | chr8_1:64906619-64906638 | None:intergenic | 40.0% | |
| TGTGTGTGAAAGTAACACAC+TGG | - | chr8_1:64906690-64906709 | None:intergenic | 40.0% | |
| TCAATCATCATGCACAAGAG+CGG | + | chr8_1:64906792-64906811 | Msa1207460:exon | 40.0% | |
| ! | GTTTGAGATGGGTTTGAAGA+AGG | - | chr8_1:64906862-64906881 | None:intergenic | 40.0% |
| ! | ATCTTGTTGTGACGCTTTGT+GGG | - | chr8_1:64906900-64906919 | None:intergenic | 40.0% |
| ! | AGCAGTAACGGAGTATTCAA+CGG | - | chr8_1:64907093-64907112 | None:intergenic | 40.0% |
| CTAGGCTTAATCTTCTTCAG+AGG | + | chr8_1:64907165-64907184 | Msa1207460:CDS | 40.0% | |
| TGTAGGTAAGAACATCAACG+GGG | - | chr8_1:64907268-64907287 | None:intergenic | 40.0% | |
| ATGTTCTTACCTACATCGCA+TGG | + | chr8_1:64907273-64907292 | Msa1207460:CDS | 40.0% | |
| TTCTGGGTTTCCTTCTAATC+GGG | + | chr8_1:64907301-64907320 | Msa1207460:CDS | 40.0% | |
| TTTCCTTCTAATCGGGTCAT+CGG | + | chr8_1:64907308-64907327 | Msa1207460:CDS | 40.0% | |
| ATTAAGTCATCGTCTCAACG+AGG | - | chr8_1:64907704-64907723 | None:intergenic | 40.0% | |
| CGTTGAGACGATGACTTAAT+TGG | + | chr8_1:64907704-64907723 | Msa1207460:intron | 40.0% | |
| GACGATGACTTAATTGGTGT+CGG | + | chr8_1:64907710-64907729 | Msa1207460:intron | 40.0% | |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr8_1:64908266-64908285 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr8_1:64908266-64908285 | Msa1207460:intron | 40.0% |
| TGCATATGAGAAAGAAACGC+TGG | + | chr8_1:64908648-64908667 | Msa1207460:CDS | 40.0% | |
| GTTCCATTATTAGGGACCAA+AGG | + | chr8_1:64908770-64908789 | Msa1207460:CDS | 40.0% | |
| ! | ACACAGGGTGAATTTTCCTT+TGG | - | chr8_1:64908789-64908808 | None:intergenic | 40.0% |
| ! | AATTCACCCTGTGTCTGTTT+TGG | + | chr8_1:64908795-64908814 | Msa1207460:CDS | 40.0% |
| !!! | GTTTTGGCTAAGGGGTTTTA+TGG | + | chr8_1:64908811-64908830 | Msa1207460:CDS | 40.0% |
| TGTGCACATGAATAATGAGG+AGG | + | chr8_1:64908906-64908925 | Msa1207460:CDS | 40.0% | |
| TAAGCAAAAAACACTTGCGG+TGG | - | chr8_1:64909065-64909084 | None:intergenic | 40.0% | |
| !! | GTACTTGCTATCCAAAATGG+TGG | + | chr8_1:64909085-64909104 | Msa1207460:three_prime_UTR | 40.0% |
| TCCAAAATGGTGGCTGAATT+CGG | + | chr8_1:64909095-64909114 | Msa1207460:three_prime_UTR | 40.0% | |
| GTAACACACTGGACTGTGAA+GGG | - | chr8_1:64906679-64906698 | None:intergenic | 45.0% | |
| AGTAACACACTGGACTGTGA+AGG | - | chr8_1:64906680-64906699 | None:intergenic | 45.0% | |
| AGAAGGCTTGGGTTAAGTCA+AGG | - | chr8_1:64906845-64906864 | None:intergenic | 45.0% | |
| ! | GATGGGTTTGAAGAAGGCTT+GGG | - | chr8_1:64906856-64906875 | None:intergenic | 45.0% |
| ! | AGATGGGTTTGAAGAAGGCT+TGG | - | chr8_1:64906857-64906876 | None:intergenic | 45.0% |
| ! | GATCTTGTTGTGACGCTTTG+TGG | - | chr8_1:64906901-64906920 | None:intergenic | 45.0% |
| CACAACAAGATCTCCGTCAT+CGG | + | chr8_1:64906909-64906928 | Msa1207460:CDS | 45.0% | |
| AGTTAGGATGGTCTGAGCAA+TGG | - | chr8_1:64906955-64906974 | None:intergenic | 45.0% | |
| AGTTGATCTTAACACGGGGA+AGG | - | chr8_1:64907067-64907086 | None:intergenic | 45.0% | |
| ! | GAGGAGTTGATCTTAACACG+GGG | - | chr8_1:64907071-64907090 | None:intergenic | 45.0% |
| ! | GGAGGAGTTGATCTTAACAC+GGG | - | chr8_1:64907072-64907091 | None:intergenic | 45.0% |
| ! | CGGAGGAGTTGATCTTAACA+CGG | - | chr8_1:64907073-64907092 | None:intergenic | 45.0% |
| ! | AGTAACGGAGTATTCAACGG+AGG | - | chr8_1:64907090-64907109 | None:intergenic | 45.0% |
| GTTGAATACTCCGTTACTGC+TGG | + | chr8_1:64907092-64907111 | Msa1207460:CDS | 45.0% | |
| GAGGAATCTTTCTCTGTTCC+AGG | + | chr8_1:64907184-64907203 | Msa1207460:CDS | 45.0% | |
| ACGATGATCAGAACCGTTTC+CGG | - | chr8_1:64907239-64907258 | None:intergenic | 45.0% | |
| AGAAAGCTTCCATGCGATGT+AGG | - | chr8_1:64907285-64907304 | None:intergenic | 45.0% | |
| TACATCGCATGGAAGCTTTC+TGG | + | chr8_1:64907284-64907303 | Msa1207460:CDS | 45.0% | |
| ACATCGCATGGAAGCTTTCT+GGG | + | chr8_1:64907285-64907304 | Msa1207460:CDS | 45.0% | |
| TTCCTTCTAATCGGGTCATC+GGG | + | chr8_1:64907309-64907328 | Msa1207460:CDS | 45.0% | |
| ! | CACCAACGTATGTTGCCTTT+TGG | + | chr8_1:64907653-64907672 | Msa1207460:intron | 45.0% |
| CTCCAAAAGGCAACATACGT+TGG | - | chr8_1:64907658-64907677 | None:intergenic | 45.0% | |
| GGCTGAGACGCTAATCTAAT+TGG | - | chr8_1:64907775-64907794 | None:intergenic | 45.0% | |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr8_1:64908265-64908284 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr8_1:64908265-64908284 | Msa1207460:intron | 45.0% |
| TTGTGGTCTAGCATCAGCAT+TGG | + | chr8_1:64908586-64908605 | Msa1207460:CDS | 45.0% | |
| GTTACACTTCTTGGGCCATT+GGG | + | chr8_1:64908725-64908744 | Msa1207460:CDS | 45.0% | |
| CTTGGCGCGTTCCATTATTA+GGG | + | chr8_1:64908762-64908781 | Msa1207460:CDS | 45.0% | |
| CCTTAGCCAAAACAGACACA+GGG | - | chr8_1:64908804-64908823 | None:intergenic | 45.0% | |
| !!! | CCTGTGTCTGTTTTGGCTAA+GGG | + | chr8_1:64908802-64908821 | Msa1207460:CDS | 45.0% |
| !!! | CTGTGTCTGTTTTGGCTAAG+GGG | + | chr8_1:64908803-64908822 | Msa1207460:CDS | 45.0% |
| !! | GCTAAGGGGTTTTATGGCAT+AGG | + | chr8_1:64908817-64908836 | Msa1207460:CDS | 45.0% |
| ATGAGGAGGAACAAAGGCTT+AGG | + | chr8_1:64908920-64908939 | Msa1207460:CDS | 45.0% | |
| TGAGGAGGAACAAAGGCTTA+GGG | + | chr8_1:64908921-64908940 | Msa1207460:CDS | 45.0% | |
| ! | TCCGAATTCAGCCACCATTT+TGG | - | chr8_1:64909099-64909118 | None:intergenic | 45.0% |
| TTGTGACGCTTTGTGGGTGA+TGG | - | chr8_1:64906894-64906913 | None:intergenic | 50.0% | |
| GGTGAGGTCTTGAGTTAGGA+TGG | - | chr8_1:64906967-64906986 | None:intergenic | 50.0% | |
| AACAAACCCGACAAACTCCG+CGG | + | chr8_1:64907008-64907027 | Msa1207460:CDS | 50.0% | |
| GGCGGTGACAATACAGAGAT+CGG | - | chr8_1:64907120-64907139 | None:intergenic | 50.0% | |
| GATCTCTGTATTGTCACCGC+CGG | + | chr8_1:64907119-64907138 | Msa1207460:CDS | 50.0% | |
| ! | CCAAAGGGGGTATAATTGCC+TGG | - | chr8_1:64907205-64907224 | None:intergenic | 50.0% |
| CCAGGCAATTATACCCCCTT+TGG | + | chr8_1:64907202-64907221 | Msa1207460:CDS | 50.0% | |
| GGTAAGAACATCAACGGGGT+TGG | - | chr8_1:64907264-64907283 | None:intergenic | 50.0% | |
| TTCTAATCGGGTCATCGGGT+CGG | + | chr8_1:64907313-64907332 | Msa1207460:CDS | 50.0% | |
| TCTCAGCCATGAGAACGAGA+AGG | + | chr8_1:64907787-64907806 | Msa1207460:intron | 50.0% | |
| CTCAGCCATGAGAACGAGAA+GGG | + | chr8_1:64907788-64907807 | Msa1207460:intron | 50.0% | |
| TGTAGCCCTTCTCGTTCTCA+TGG | - | chr8_1:64907796-64907815 | None:intergenic | 50.0% | |
| GGCAAGTTCTATGTCCCCAA+TGG | - | chr8_1:64907887-64907906 | None:intergenic | 50.0% | |
| GGGATAGTTCAGTGGCATTG+TGG | + | chr8_1:64908569-64908588 | Msa1207460:CDS | 50.0% | |
| ! | TGGTCTAGCATCAGCATTGG+TGG | + | chr8_1:64908589-64908608 | Msa1207460:CDS | 50.0% |
| GGTTACACTTCTTGGGCCAT+TGG | + | chr8_1:64908724-64908743 | Msa1207460:CDS | 50.0% | |
| TTCTTGGGCCATTGGGTACT+CGG | + | chr8_1:64908732-64908751 | Msa1207460:CDS | 50.0% | |
| GCTTGGCGCGTTCCATTATT+AGG | + | chr8_1:64908761-64908780 | Msa1207460:CDS | 50.0% | |
| !!! | CCCTGTGTCTGTTTTGGCTA+AGG | + | chr8_1:64908801-64908820 | Msa1207460:CDS | 50.0% |
| CCCTTAGCCAAAACAGACAC+AGG | - | chr8_1:64908805-64908824 | None:intergenic | 50.0% | |
| TTGGAGGTCCAGACTCAGTT+GGG | + | chr8_1:64908961-64908980 | Msa1207460:CDS | 50.0% | |
| TTGCGGTGGAAGACAACCAT+GGG | - | chr8_1:64909051-64909070 | None:intergenic | 50.0% | |
| AGCGGTTCTGCTTCGACGTT+AGG | + | chr8_1:64906810-64906829 | Msa1207460:CDS | 55.0% | |
| GGGTTAAGTCAAGGCCGTCT+GGG | - | chr8_1:64906836-64906855 | None:intergenic | 55.0% | |
| TGGGTTAAGTCAAGGCCGTC+TGG | - | chr8_1:64906837-64906856 | None:intergenic | 55.0% | |
| !! | GGTGGTGCTGCGTTTGAGAT+GGG | - | chr8_1:64906873-64906892 | None:intergenic | 55.0% |
| !! | TGGTGGTGCTGCGTTTGAGA+TGG | - | chr8_1:64906874-64906893 | None:intergenic | 55.0% |
| ! | TGACGCTTTGTGGGTGATGG+TGG | - | chr8_1:64906891-64906910 | None:intergenic | 55.0% |
| AATGGCCATGCCGACGTTAC+CGG | - | chr8_1:64906937-64906956 | None:intergenic | 55.0% | |
| CGTCGGTGAGGTCTTGAGTT+AGG | - | chr8_1:64906971-64906990 | None:intergenic | 55.0% | |
| GAAGATCAAGCATCTCGCCG+CGG | - | chr8_1:64907028-64907047 | None:intergenic | 55.0% | |
| GAGATCGGAGCCAGCAGTAA+CGG | - | chr8_1:64907105-64907124 | None:intergenic | 55.0% | |
| GACCCGATGACCCGATTAGA+AGG | - | chr8_1:64907314-64907333 | None:intergenic | 55.0% | |
| TCTAATCGGGTCATCGGGTC+GGG | + | chr8_1:64907314-64907333 | Msa1207460:CDS | 55.0% | |
| CATCGGGTCGGGTACCAATT+TGG | + | chr8_1:64907325-64907344 | Msa1207460:CDS | 55.0% | |
| CCTGGAGGTGATCAGCAATG+AGG | - | chr8_1:64907370-64907389 | None:intergenic | 55.0% | |
| CCTCATTGCTGATCACCTCC+AGG | + | chr8_1:64907367-64907386 | Msa1207460:CDS | 55.0% | |
| !! | GAACATCCTGAGCGTTGACC+TGG | - | chr8_1:64907388-64907407 | None:intergenic | 55.0% |
| GGTCAACGCTCAGGATGTTC+AGG | + | chr8_1:64907388-64907407 | Msa1207460:CDS | 55.0% | |
| TTGGTGCAGGCATGCATAGC+AGG | + | chr8_1:64908538-64908557 | Msa1207460:intron | 55.0% | |
| TGGTGCAGGCATGCATAGCA+GGG | + | chr8_1:64908539-64908558 | Msa1207460:intron | 55.0% | |
| TTGAGCTTGCCAGCACAGCT+TGG | + | chr8_1:64908856-64908875 | Msa1207460:CDS | 55.0% | |
| TTGCCAGCACAGCTTGGAAG+AGG | + | chr8_1:64908862-64908881 | Msa1207460:CDS | 55.0% | |
| CAGCACAGCTTGGAAGAGGA+GGG | + | chr8_1:64908866-64908885 | Msa1207460:CDS | 55.0% | |
| AGCACAGCTTGGAAGAGGAG+GGG | + | chr8_1:64908867-64908886 | Msa1207460:CDS | 55.0% | |
| CTTGGAGGTCCAGACTCAGT+TGG | + | chr8_1:64908960-64908979 | Msa1207460:CDS | 55.0% | |
| CTTGCGGTGGAAGACAACCA+TGG | - | chr8_1:64909052-64909071 | None:intergenic | 55.0% | |
| GCTTCGACGTTAGGCCCAGA+CGG | + | chr8_1:64906819-64906838 | Msa1207460:CDS | 60.0% | |
| AAGATCTCCGTCATCGGCGC+CGG | + | chr8_1:64906915-64906934 | Msa1207460:CDS | 60.0% | |
| GTCGACGATGACGAGCTCGT+CGG | - | chr8_1:64906988-64907007 | None:intergenic | 60.0% | |
| ATCTCGCCGCGGAGTTTGTC+GGG | - | chr8_1:64907017-64907036 | None:intergenic | 60.0% | |
| CATCTCGCCGCGGAGTTTGT+CGG | - | chr8_1:64907018-64907037 | None:intergenic | 60.0% | |
| GTATTGTCACCGCCGGTGCA+AGG | + | chr8_1:64907126-64907145 | Msa1207460:CDS | 60.0% | |
| ACCACCGATCTGCCTTGCAC+CGG | - | chr8_1:64907141-64907160 | None:intergenic | 60.0% | |
| GGCAGATCGGTGGTGAGTCT+AGG | + | chr8_1:64907147-64907166 | Msa1207460:CDS | 60.0% | |
| GGCGAGTAACGAGCCAAAGG+GGG | - | chr8_1:64907218-64907237 | None:intergenic | 60.0% | |
| CGGCGAGTAACGAGCCAAAG+GGG | - | chr8_1:64907219-64907238 | None:intergenic | 60.0% | |
| CCGGCGAGTAACGAGCCAAA+GGG | - | chr8_1:64907220-64907239 | None:intergenic | 60.0% | |
| ! | CCCTTTGGCTCGTTACTCGC+CGG | + | chr8_1:64907217-64907236 | Msa1207460:CDS | 60.0% |
| TCCGGCGAGTAACGAGCCAA+AGG | - | chr8_1:64907221-64907240 | None:intergenic | 60.0% | |
| GGCTCGTTACTCGCCGGAAA+CGG | + | chr8_1:64907223-64907242 | Msa1207460:CDS | 60.0% | |
| TCACCTCCAGGTCAACGCTC+AGG | + | chr8_1:64907379-64907398 | Msa1207460:CDS | 60.0% | |
| !! | CATCCTGAGCGTTGACCTGG+AGG | - | chr8_1:64907385-64907404 | None:intergenic | 60.0% |
| GGTGCAGGCATGCATAGCAG+GGG | + | chr8_1:64908540-64908559 | Msa1207460:intron | 60.0% | |
| GCATGCATAGCAGGGGAGCA+CGG | + | chr8_1:64908547-64908566 | Msa1207460:CDS | 60.0% | |
| ! | CATGCATAGCAGGGGAGCAC+GGG | + | chr8_1:64908548-64908567 | Msa1207460:CDS | 60.0% |
| ! | ATGCATAGCAGGGGAGCACG+GGG | + | chr8_1:64908549-64908568 | Msa1207460:CDS | 60.0% |
| GGAGCACGGGGATAGTTCAG+TGG | + | chr8_1:64908561-64908580 | Msa1207460:CDS | 60.0% | |
| TTGGGCCATTGGGTACTCGG+TGG | + | chr8_1:64908735-64908754 | Msa1207460:CDS | 60.0% | |
| CCTCCTCTTCCAAGCTGTGC+TGG | - | chr8_1:64908868-64908887 | None:intergenic | 60.0% | |
| CCAGCACAGCTTGGAAGAGG+AGG | + | chr8_1:64908865-64908884 | Msa1207460:CDS | 60.0% | |
| !! | CTTGGAAGAGGAGGGGTGCT+TGG | + | chr8_1:64908874-64908893 | Msa1207460:CDS | 60.0% |
| !! | GACGTTACCGGCGCCGATGA+CGG | - | chr8_1:64906925-64906944 | None:intergenic | 65.0% |
| !! | GTCATCGGCGCCGGTAACGT+CGG | + | chr8_1:64906924-64906943 | Msa1207460:CDS | 65.0% |
| CGATGACGAGCTCGTCGGTG+AGG | - | chr8_1:64906983-64907002 | None:intergenic | 65.0% | |
| ACCGCCGGTGCAAGGCAGAT+CGG | + | chr8_1:64907134-64907153 | Msa1207460:CDS | 65.0% | |
| ACCGATCTGCCTTGCACCGG+CGG | - | chr8_1:64907138-64907157 | None:intergenic | 65.0% | |
| ! | GCCATTGGGTACTCGGTGGC+TGG | + | chr8_1:64908739-64908758 | Msa1207460:CDS | 65.0% |
| GCCAGCCACCGAGTACCCAA+TGG | - | chr8_1:64908743-64908762 | None:intergenic | 65.0% | |
| ! | TGGGTACTCGGTGGCTGGCT+TGG | + | chr8_1:64908744-64908763 | Msa1207460:CDS | 65.0% |
| GCCGGTGCAAGGCAGATCGG+TGG | + | chr8_1:64907137-64907156 | Msa1207460:CDS | 70.0% | |
| !! | CGGCGCCGGTAACGTCGGCA+TGG | + | chr8_1:64906929-64906948 | Msa1207460:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 64906588 | 64909201 | 64906588 | ID=Msa1207460;Name=Msa1207460 |
| chr8_1 | mRNA | 64906588 | 64909201 | 64906588 | ID=Msa1207460-mRNA-1;Parent=Msa1207460;Name=Msa1207460-mRNA-1;_AED=0.01;_eAED=0.01;_QI=213|1|1|1|1|1|2|211|350 |
| chr8_1 | exon | 64906588 | 64907409 | 64906588 | ID=Msa1207460-mRNA-1:exon:21288;Parent=Msa1207460-mRNA-1 |
| chr8_1 | exon | 64908547 | 64909201 | 64908547 | ID=Msa1207460-mRNA-1:exon:21289;Parent=Msa1207460-mRNA-1 |
| chr8_1 | five_prime_UTR | 64906588 | 64906800 | 64906588 | ID=Msa1207460-mRNA-1:five_prime_utr;Parent=Msa1207460-mRNA-1 |
| chr8_1 | CDS | 64906801 | 64907409 | 64906801 | ID=Msa1207460-mRNA-1:cds;Parent=Msa1207460-mRNA-1 |
| chr8_1 | CDS | 64908547 | 64908990 | 64908547 | ID=Msa1207460-mRNA-1:cds;Parent=Msa1207460-mRNA-1 |
| chr8_1 | three_prime_UTR | 64908991 | 64909201 | 64908991 | ID=Msa1207460-mRNA-1:three_prime_utr;Parent=Msa1207460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
